Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-24 01:16:48 (23388): vboxwrapper version 26210
2025-11-24 01:16:48 (23388): BOINC client version: 8.2.4
2025-11-24 01:16:48 (23388): Detected: VirtualBox VboxManage Interface (Version: 7.1.10)
2025-11-24 01:16:48 (23388): Successfully copied 'init_data.xml' to the shared directory.
2025-11-24 01:16:49 (23388): Create VM. (boinc_d126bd22ecb76a54, slot#5)
2025-11-24 01:16:49 (23388): Setting Memory Size for VM. (4800MB)
2025-11-24 01:16:49 (23388): Setting CPU Count for VM. (8)
2025-11-24 01:16:50 (23388): Setting Chipset Options for VM.
2025-11-24 01:16:50 (23388): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-24 01:16:50 (23388): Setting Boot Options for VM.
2025-11-24 01:16:51 (23388): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-24 01:16:51 (23388): Enabling VM Network Access.
2025-11-24 01:16:51 (23388): Disabling USB Support for VM.
2025-11-24 01:16:51 (23388): Disabling COM Port Support for VM.
2025-11-24 01:16:52 (23388): Disabling LPT Port Support for VM.
2025-11-24 01:16:52 (23388): Disabling Audio Support for VM.
2025-11-24 01:16:52 (23388): Disabling Clipboard Support for VM.
2025-11-24 01:16:52 (23388): Disabling Drag and Drop Support for VM.
2025-11-24 01:16:53 (23388): Adding storage controller(s) to VM.
2025-11-24 01:16:53 (23388): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-24 01:16:54 (23388): Adding VirtualBox Guest Additions to VM.
2025-11-24 01:16:54 (23388): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-24 01:16:54 (23388): forwarding host port 52781 to guest port 80
2025-11-24 01:16:54 (23388): Enabling remote desktop for VM.
2025-11-24 01:16:55 (23388): Required extension pack not installed, remote desktop not enabled.
2025-11-24 01:16:55 (23388): Enabling shared directory for VM.
2025-11-24 01:16:55 (23388): Starting VM using VBoxManage interface. (boinc_d126bd22ecb76a54, slot#5)
2025-11-24 01:17:00 (23388): Successfully started VM. (PID = '34628')
2025-11-24 01:17:00 (23388): Reporting VM Process ID to BOINC.
2025-11-24 01:17:00 (23388): Guest Log: BIOS: VirtualBox 7.1.10
2025-11-24 01:17:00 (23388): Guest Log: CPUID EDX: 0x178bfbff
2025-11-24 01:17:00 (23388): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-24 01:17:00 (23388): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-24 01:17:00 (23388): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-24 01:17:00 (23388): Detected: Web Application Enabled (http://localhost:52781)
2025-11-24 01:17:00 (23388): Preference change detected
2025-11-24 01:17:00 (23388): Setting CPU throttle for VM. (100%)
2025-11-24 01:17:01 (23388): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-24 01:17:02 (23388): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-24 01:17:02 (23388): Guest Log: BIOS: Booting from Hard Disk...
2025-11-24 01:17:05 (23388): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-24 01:17:05 (23388): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-24 01:17:05 (23388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-24 01:17:05 (23388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-24 01:17:05 (23388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-24 01:17:05 (23388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-24 01:17:05 (23388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-24 01:17:05 (23388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-24 01:17:05 (23388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-24 01:17:05 (23388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-24 01:17:05 (23388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-24 01:17:05 (23388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-24 01:17:05 (23388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-24 01:17:05 (23388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-24 01:17:05 (23388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-24 01:17:05 (23388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-24 01:17:05 (23388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-24 01:17:05 (23388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-24 01:17:05 (23388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-24 01:17:05 (23388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-24 01:17:05 (23388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-24 01:17:05 (23388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-24 01:17:05 (23388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-24 01:17:05 (23388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-24 01:17:05 (23388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-24 01:17:05 (23388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-24 01:17:05 (23388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-24 01:17:05 (23388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-24 01:17:05 (23388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-24 01:17:05 (23388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-24 01:17:05 (23388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-24 01:17:05 (23388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-24 01:17:14 (23388): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-24 01:17:14 (23388): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-24 01:17:19 (23388): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-24 01:17:19 (23388): Guest Log: 00:00:00.000179 main     Log opened 2025-11-24T01:17:17.181440000Z
2025-11-24 01:17:19 (23388): Guest Log: 00:00:00.000293 main     OS Product: Linux
2025-11-24 01:17:19 (23388): Guest Log: 00:00:00.000318 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-24 01:17:19 (23388): Guest Log: 00:00:00.000336 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-24 01:17:19 (23388): Guest Log: 00:00:00.000354 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-24 01:17:19 (23388): Guest Log: 00:00:00.000355 main     Process ID: 1381
2025-11-24 01:17:19 (23388): Guest Log: 00:00:00.000355 main     Package type: LINUX_64BITS_GENERIC
2025-11-24 01:17:19 (23388): Guest Log: 00:00:00.002202 main     5.2.32 r132073 started. Verbose level = 0
2025-11-24 01:17:19 (23388): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-24 01:17:19 (23388): Guest Log: [INFO] Mounting shared directory
2025-11-24 01:17:19 (23388): Guest Log: [INFO] Checking for init_data.xml
2025-11-24 01:17:24 (23388): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-24 01:17:24 (23388): Guest Log: [INFO] Detected branch: prod
2025-11-24 01:17:24 (23388): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-24 01:17:24 (23388): Guest Log: Copying input files
2025-11-24 01:17:26 (23388): Guest Log: Copied input files into RunAtlas.
2025-11-24 01:17:26 (23388): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-24 01:17:26 (23388): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-24 01:17:26 (23388): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-24 01:17:26 (23388): Guest Log: Further information can be found at the LHC@home message board.
2025-11-24 01:17:29 (23388): Guest Log: 00:00:10.004772 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 612 418 268 000ns (GuestNow=1 763 968 649 603 146 000 ns GuestLast=1 763 947 037 184 878 000 ns fSetTimeLastLoop=true )
2025-11-24 01:17:36 (23388): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-24 01:17:36 (23388): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-24 01:17:36 (23388): Guest Log: 2.6.3.0 1660 0 30116 153236 3 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-24 01:17:37 (23388): Guest Log: copied the webapp to /var/www
2025-11-24 01:17:37 (23388): Guest Log: ATHENA_PROC_NUMBER=8
2025-11-24 01:17:37 (23388): Guest Log: ATHENA_CORE_NUMBER=8
2025-11-24 01:17:38 (23388): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-24 01:17:38 (23388): Guest Log:  *** Starting ATLAS job. (PandaID=6894245895 taskID=47533967) ***
2025-11-24 02:57:05 (23388): Status Report: Elapsed Time: '6000.000000'
2025-11-24 02:57:05 (23388): Status Report: CPU Time: '42520.203125'
2025-11-24 04:37:10 (23388): Status Report: Elapsed Time: '12000.000000'
2025-11-24 04:37:10 (23388): Status Report: CPU Time: '86480.843750'
2025-11-24 05:47:38 (23388): Guest Log:  *** Job finished ***
2025-11-24 05:47:38 (23388): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-24 05:47:38 (23388): Guest Log: 2025-11-24 11:47:27,444 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-24 05:47:38 (23388): Guest Log: 2025-11-24 11:47:27,444 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-24 05:47:38 (23388): Guest Log: 2025-11-24 11:47:31,033 | INFO     | [monitor] cgroup control has ended
2025-11-24 05:47:38 (23388): Guest Log: 2025-11-24 11:47:32,571 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140659558725440)>', '<ExcThread(monitor, started 140658367002368)>']
2025-11-24 05:47:38 (23388): Guest Log: 2025-11-24 11:47:33,532 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-24 05:47:38 (23388): Guest Log: 2025-11-24 11:47:33,533 | INFO     | [monitor] control thread has ended
2025-11-24 05:47:38 (23388): Guest Log: 2025-11-24 11:47:37,577 | INFO     | all workflow threads have been joined
2025-11-24 05:47:38 (23388): Guest Log: 2025-11-24 11:47:37,578 | INFO     | end of generic workflow (traces error code: 0)
2025-11-24 05:47:38 (23388): Guest Log: 2025-11-24 11:47:37,578 | INFO     | traces error code: 0
2025-11-24 05:47:38 (23388): Guest Log: 2025-11-24 11:47:37,578 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-24 05:47:38 (23388): Guest Log: 2025-11-24 11:47:37,666 [wrapper] ==== pilot stdout END ====
2025-11-24 05:47:38 (23388): Guest Log: 2025-11-24 11:47:37,670 [wrapper] ==== wrapper stdout RESUME ====
2025-11-24 05:47:38 (23388): Guest Log: 2025-11-24 11:47:37,675 [wrapper] pilotpid: 6092
2025-11-24 05:47:38 (23388): Guest Log: 2025-11-24 11:47:37,678 [wrapper] Pilot exit status: 0
2025-11-24 05:47:38 (23388): Guest Log: 2025-11-24 11:47:37,709 [wrapper] pandaids: 6894245895
2025-11-24 05:47:38 (23388): Guest Log: 2025-11-24 11:47:37,741 [wrapper] cleanup supervisor_pilot 18305 6093
2025-11-24 05:47:38 (23388): Guest Log: 2025-11-24 11:47:37,751 [wrapper] Test setup, not cleaning
2025-11-24 05:47:38 (23388): Guest Log: 2025-11-24 11:47:37,755 [wrapper] apfmon messages muted
2025-11-24 05:47:38 (23388): Guest Log: 2025-11-24 11:47:37,761 [wrapper] ==== wrapper stdout END ====
2025-11-24 05:47:38 (23388): Guest Log: 2025-11-24 11:47:37,766 [wrapper] ==== wrapper stderr END ====
2025-11-24 05:47:38 (23388): Guest Log:  *** Error codes and diagnostics ***
2025-11-24 05:47:38 (23388): Guest Log:     "exeErrorCode": 0,
2025-11-24 05:47:38 (23388): Guest Log:     "exeErrorDiag": "",
2025-11-24 05:47:38 (23388): Guest Log:     "pilotErrorCode": 0,
2025-11-24 05:47:38 (23388): Guest Log:     "pilotErrorDiag": "",
2025-11-24 05:47:38 (23388): Guest Log:  *** Listing of results directory ***
2025-11-24 05:47:38 (23388): Guest Log: total 909920
2025-11-24 05:47:38 (23388): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 21 01:08 pilot3.tar.gz
2025-11-24 05:47:38 (23388): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 21 01:24 runpilot2-wrapper.sh
2025-11-24 05:47:38 (23388): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 21 01:24 queuedata.json
2025-11-24 05:47:38 (23388): Guest Log: -rwxr-xr-x. 1 atlas atlas     11692 Nov 24 07:17 init_data.xml
2025-11-24 05:47:38 (23388): Guest Log: -rwxr-xr-x. 1 atlas atlas    590101 Nov 24 07:17 input.tar.gz
2025-11-24 05:47:38 (23388): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 24 07:17 start_atlas.sh
2025-11-24 05:47:38 (23388): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 24 07:17 EVNT.47493127._002087.pool.root.1 -> /data/./ATLAS.root_0
2025-11-24 05:47:38 (23388): Guest Log: -rw-r--r--. 1 atlas atlas      2785 Nov 24 07:17 pandaJob.out
2025-11-24 05:47:38 (23388): Guest Log: -rw-------. 1 atlas atlas    989786 Nov 24 07:18 agis_schedconf.cvmfs.json
2025-11-24 05:47:38 (23388): Guest Log: drwx------. 5 atlas atlas      4096 Nov 24 07:18 pilot3
2025-11-24 05:47:38 (23388): Guest Log: -rw-------. 1 atlas atlas 920472534 Nov 24 11:46 HITS.47533967._000586.pool.root.1
2025-11-24 05:47:38 (23388): Guest Log: -rw-------. 1 atlas atlas        95 Nov 24 11:46 pilot_heartbeat.json
2025-11-24 05:47:38 (23388): Guest Log: -rw-------. 1 atlas atlas      1040 Nov 24 11:46 memory_monitor_summary.json
2025-11-24 05:47:38 (23388): Guest Log: -rw-------. 1 atlas atlas   1516227 Nov 24 11:46 agis_ddmendpoints.agis.ALL.json
2025-11-24 05:47:38 (23388): Guest Log: -rw-------. 1 atlas atlas   1583011 Nov 24 11:46 log.47533967._000586.job.log.tgz.1
2025-11-24 05:47:38 (23388): Guest Log: -rw-------. 1 atlas atlas      8628 Nov 24 11:46 heartbeat.json
2025-11-24 05:47:38 (23388): Guest Log: -rw-------. 1 atlas atlas      5063 Nov 24 11:47 pilotlog.txt
2025-11-24 05:47:38 (23388): Guest Log: -rw-------. 1 atlas atlas   2139214 Nov 24 11:47 log.47533967._000586.job.log.1
2025-11-24 05:47:38 (23388): Guest Log: -rw-------. 1 atlas atlas       353 Nov 24 11:47 output.list
2025-11-24 05:47:38 (23388): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 24 11:47 runtime_log
2025-11-24 05:47:38 (23388): Guest Log: -rw-------. 1 atlas atlas   3737600 Nov 24 11:47 result.tar.gz
2025-11-24 05:47:38 (23388): Guest Log: -rw-r--r--. 1 atlas atlas      8743 Nov 24 11:47 runtime_log.err
2025-11-24 05:47:38 (23388): Guest Log: -rw-------. 1 atlas atlas       661 Nov 24 11:47 GL6KDmZ4Ug8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKoIKDmCBiUZm.diag
2025-11-24 05:47:38 (23388): Guest Log: Looking for outputfile HITS.47533967._000586.pool.root.1
2025-11-24 05:47:38 (23388): Guest Log: HITS file was successfully produced
2025-11-24 05:47:38 (23388): Guest Log: -rw-------. 1 atlas atlas 920472534 Nov 24 11:46 /home/atlas/RunAtlas/HITS.47533967._000586.pool.root.1
2025-11-24 05:47:41 (23388): Guest Log: Successfully finished the ATLAS job!
2025-11-24 05:47:41 (23388): Guest Log: Copying the results back to the shared directory!
2025-11-24 05:47:41 (23388): Guest Log:  *** Contents of shared directory: ***
2025-11-24 05:47:41 (23388): Guest Log: total 1301972
2025-11-24 05:47:41 (23388): Guest Log: -rwxrwxrwx. 1 root root 408380354 Nov 24 07:16 ATLAS.root_0
2025-11-24 05:47:41 (23388): Guest Log: -rwxrwxrwx. 1 root root 920472534 Nov 24 11:47 HITS.pool.root.1
2025-11-24 05:47:41 (23388): Guest Log: -rwxrwxrwx. 1 root root     11692 Nov 24 07:16 init_data.xml
2025-11-24 05:47:41 (23388): Guest Log: -rwxrwxrwx. 1 root root    590101 Nov 24 02:28 input.tar.gz
2025-11-24 05:47:41 (23388): Guest Log: -rwxrwxrwx. 1 root root   3737600 Nov 24 11:47 result.tar.gz
2025-11-24 05:47:41 (23388): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 24 02:28 start_atlas.sh
2025-11-24 05:47:41 (23388): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-24 05:47:41 (23388): VM Completion File Detected.
2025-11-24 05:47:41 (23388): Powering off VM.
2025-11-24 05:47:42 (23388): Successfully stopped VM.
2025-11-24 05:47:42 (23388): Deregistering VM. (boinc_d126bd22ecb76a54, slot#5)
2025-11-24 05:47:42 (23388): Removing network bandwidth throttle group from VM.
2025-11-24 05:47:42 (23388): Removing VM from VirtualBox.
2025-11-24 05:47:47 (23388): called boinc_finish(0)

</stderr_txt>
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