Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:28:58 (8986): wrapper (7.7.26015): starting
19:28:58 (8986): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 19:28:58] Arguments: --nthreads 12
[2025-11-23 19:28:58] Threads: 12
[2025-11-23 19:28:58] Checking for CVMFS
[2025-11-23 19:28:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 19:28:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 19:28:58] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 19:28:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 19:28:59] 2.11.2.0 2979 284096 92704 153227 2 81 12525661 20275200 1 130560 1 127160151 99.974 15910148 13802 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 19:28:59] CVMFS is ok
[2025-11-23 19:28:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 19:28:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 19:28:59] Further information can be found at the LHC@home message board.
[2025-11-23 19:28:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 19:28:59] Checking for apptainer binary...
[2025-11-23 19:28:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 19:28:59] Running /usr/bin/apptainer --version
[2025-11-23 19:28:59] apptainer version 1.3.2-1.el7
[2025-11-23 19:28:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 19:29:00] c-205-21.aglt2.org
[2025-11-23 19:29:00] apptainer works
[2025-11-23 19:29:00] Set ATHENA_PROC_NUMBER=12
[2025-11-23 19:29:00] Set ATHENA_CORE_NUMBER=12
[2025-11-23 19:29:00] Starting ATLAS job with PandaID=6895353436
[2025-11-23 19:29:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 02:33:06]  *** The last 200 lines of the pilot log: ***
[2025-11-24 02:33:06] 2025-11-24 07:32:31,370 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 02:33:06] 2025-11-24 07:32:32,928 | INFO     | time since job start (25397s) is within the limit (172800.0s)
[2025-11-24 02:33:06] 2025-11-24 07:32:33,873 | INFO     | monitor loop #1901: job 0:6895353436 is in state 'finished'
[2025-11-24 02:33:06] 2025-11-24 07:32:33,873 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 02:33:06] 2025-11-24 07:32:34,084 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 02:33:06] 2025-11-24 07:32:34,089 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1751.25
[2025-11-24 02:33:06] 2025-11-24 07:32:34,092 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895353436/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 02:33:06] 2025-11-24 07:32:34,092 | INFO     | extracted standard info from prmon json
[2025-11-24 02:33:06] 2025-11-24 07:32:34,093 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 02:33:06] 2025-11-24 07:32:34,093 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 02:33:06] 2025-11-24 07:32:34,101 | INFO     | fitting pss+swap vs Time
[2025-11-24 02:33:06] 2025-11-24 07:32:34,101 | INFO     | sum of square deviations: 22323001433.653904
[2025-11-24 02:33:06] 2025-11-24 07:32:34,105 | INFO     | sum of deviations: 315435288898.02856
[2025-11-24 02:33:06] 2025-11-24 07:32:34,105 | INFO     | mean x: 1763956842.7211537
[2025-11-24 02:33:06] 2025-11-24 07:32:34,105 | INFO     | mean y: 3425450.189903846
[2025-11-24 02:33:06] 2025-11-24 07:32:34,105 | INFO     | intersect: -24922175972.23162
[2025-11-24 02:33:06] 2025-11-24 07:32:34,106 | INFO     | chi2: 5.622297158555834
[2025-11-24 02:33:06] 2025-11-24 07:32:34,106 | INFO     | sum of square deviations: 21527740163.406322
[2025-11-24 02:33:06] 2025-11-24 07:32:34,110 | INFO     | sum of deviations: 459803915610.1991
[2025-11-24 02:33:06] 2025-11-24 07:32:34,110 | INFO     | mean x: 1763956690.2238443
[2025-11-24 02:33:06] 2025-11-24 07:32:34,110 | INFO     | mean y: 3453104.3673965936
[2025-11-24 02:33:06] 2025-11-24 07:32:34,110 | INFO     | intersect: -37672317179.70662
[2025-11-24 02:33:06] 2025-11-24 07:32:34,111 | INFO     | chi2: 3.117526143477099
[2025-11-24 02:33:06] 2025-11-24 07:32:34,111 | INFO     | current chi2=3.117526143477099 (change=44.550669316136265 %)
[2025-11-24 02:33:06] 2025-11-24 07:32:34,112 | INFO     | sum of square deviations: 20751595530.65264
[2025-11-24 02:33:06] 2025-11-24 07:32:34,116 | INFO     | sum of deviations: 514298632386.2704
[2025-11-24 02:33:06] 2025-11-24 07:32:34,116 | INFO     | mean x: 1763956537.726601
[2025-11-24 02:33:06] 2025-11-24 07:32:34,116 | INFO     | mean y: 3463759.660098522
[2025-11-24 02:33:06] 2025-11-24 07:32:34,116 | INFO     | intersect: -43713677585.041115
[2025-11-24 02:33:06] 2025-11-24 07:32:34,117 | INFO     | chi2: 2.5222134938184158
[2025-11-24 02:33:06] 2025-11-24 07:32:34,117 | INFO     | current chi2=2.5222134938184158 (change=19.095674655504496 %)
[2025-11-24 02:33:06] 2025-11-24 07:32:34,117 | INFO     | right removable region: 405
[2025-11-24 02:33:06] 2025-11-24 07:32:34,117 | INFO     | sum of square deviations: 21527684043.40633
[2025-11-24 02:33:06] 2025-11-24 07:32:34,122 | INFO     | sum of deviations: 175587356967.92688
[2025-11-24 02:33:06] 2025-11-24 07:32:34,122 | INFO     | mean x: 1763956995.2238443
[2025-11-24 02:33:06] 2025-11-24 07:32:34,122 | INFO     | mean y: 3452187.109489051
[2025-11-24 02:33:06] 2025-11-24 07:32:34,122 | INFO     | intersect: -14384001009.06035
[2025-11-24 02:33:06] 2025-11-24 07:32:34,123 | INFO     | chi2: 3.2315276060208764
[2025-11-24 02:33:06] 2025-11-24 07:32:34,123 | INFO     | current chi2=3.2315276060208764 (change=42.523002344277735 %)
[2025-11-24 02:33:06] 2025-11-24 07:32:34,123 | INFO     | sum of square deviations: 20751483290.652626
[2025-11-24 02:33:06] 2025-11-24 07:32:34,128 | INFO     | sum of deviations: 144334712366.27084
[2025-11-24 02:33:06] 2025-11-24 07:32:34,128 | INFO     | mean x: 1763957147.726601
[2025-11-24 02:33:06] 2025-11-24 07:32:34,128 | INFO     | mean y: 3458319.660098522
[2025-11-24 02:33:06] 2025-11-24 07:32:34,128 | INFO     | intersect: -12265556091.38345
[2025-11-24 02:33:06] 2025-11-24 07:32:34,129 | INFO     | chi2: 3.17138329137479
[2025-11-24 02:33:06] 2025-11-24 07:32:34,129 | INFO     | current chi2=3.17138329137479 (change=1.8611728562685756 %)
[2025-11-24 02:33:06] 2025-11-24 07:32:34,129 | INFO     | left removable region: 20
[2025-11-24 02:33:06] 2025-11-24 07:32:34,129 | INFO     | sum of square deviations: 17695164327.88567
[2025-11-24 02:33:06] 2025-11-24 07:32:34,133 | INFO     | sum of deviations: 303037798709.8573
[2025-11-24 02:33:06] 2025-11-24 07:32:34,133 | INFO     | mean x: 1763957117.2285714
[2025-11-24 02:33:06] 2025-11-24 07:32:34,133 | INFO     | mean y: 3506024.4675324676
[2025-11-24 02:33:06] 2025-11-24 07:32:34,133 | INFO     | intersect: -30205068019.750053
[2025-11-24 02:33:06] 2025-11-24 07:32:34,133 | INFO     | chi2: 0.022705746832142024
[2025-11-24 02:33:06] 2025-11-24 07:32:34,134 | INFO     | current memory leak: 17.13 B/s (using 385 data points, chi2=0.02)
[2025-11-24 02:33:06] 2025-11-24 07:32:34,134 | INFO     | could have reported an average CPU frequency of 2363 MHz (18 samples)
[2025-11-24 02:33:06] 2025-11-24 07:32:34,134 | INFO     | ..............................
[2025-11-24 02:33:06] 2025-11-24 07:32:34,134 | INFO     | . Timing measurements:
[2025-11-24 02:33:06] 2025-11-24 07:32:34,134 | INFO     | . get job = 0 s
[2025-11-24 02:33:06] 2025-11-24 07:32:34,135 | INFO     | . initial setup = 2 s
[2025-11-24 02:33:06] 2025-11-24 07:32:34,135 | INFO     | . payload setup = 7 s
[2025-11-24 02:33:06] 2025-11-24 07:32:34,135 | INFO     | . stage-in = 0 s
[2025-11-24 02:33:06] 2025-11-24 07:32:34,135 | INFO     | . payload execution = 25352 s
[2025-11-24 02:33:06] 2025-11-24 07:32:34,135 | INFO     | . stage-out = 8 s
[2025-11-24 02:33:06] 2025-11-24 07:32:34,135 | INFO     | . log creation = 6 s
[2025-11-24 02:33:06] 2025-11-24 07:32:34,135 | INFO     | ..............................
[2025-11-24 02:33:06] 2025-11-24 07:32:34,695 | INFO     | 
[2025-11-24 02:33:06] 2025-11-24 07:32:34,695 | INFO     | job summary report
[2025-11-24 02:33:06] 2025-11-24 07:32:34,695 | INFO     | --------------------------------------------------
[2025-11-24 02:33:06] 2025-11-24 07:32:34,695 | INFO     | PanDA job id: 6895353436
[2025-11-24 02:33:06] 2025-11-24 07:32:34,695 | INFO     | task id: 47556137
[2025-11-24 02:33:06] 2025-11-24 07:32:34,696 | INFO     | errors: (none)
[2025-11-24 02:33:06] 2025-11-24 07:32:34,696 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 02:33:06] 2025-11-24 07:32:34,696 | INFO     | pilot state: finished 
[2025-11-24 02:33:06] 2025-11-24 07:32:34,696 | INFO     | transexitcode: 0
[2025-11-24 02:33:06] 2025-11-24 07:32:34,696 | INFO     | exeerrorcode: 0
[2025-11-24 02:33:06] 2025-11-24 07:32:34,696 | INFO     | exeerrordiag: 
[2025-11-24 02:33:06] 2025-11-24 07:32:34,697 | INFO     | exitcode: 0
[2025-11-24 02:33:06] 2025-11-24 07:32:34,697 | INFO     | exitmsg: OK
[2025-11-24 02:33:06] 2025-11-24 07:32:34,697 | INFO     | cpuconsumptiontime: 291082 s
[2025-11-24 02:33:06] 2025-11-24 07:32:34,697 | INFO     | nevents: 1000
[2025-11-24 02:33:06] 2025-11-24 07:32:34,697 | INFO     | neventsw: 0
[2025-11-24 02:33:06] 2025-11-24 07:32:34,697 | INFO     | pid: 19193
[2025-11-24 02:33:06] 2025-11-24 07:32:34,697 | INFO     | pgrp: 19193
[2025-11-24 02:33:06] 2025-11-24 07:32:34,698 | INFO     | corecount: 12
[2025-11-24 02:33:06] 2025-11-24 07:32:34,698 | INFO     | event service: False
[2025-11-24 02:33:06] 2025-11-24 07:32:34,698 | INFO     | sizes: {0: 2298807, 5: 2299069, 11: 2299125, 25363: 2336135, 25364: 2336134, 25373: 2345494, 25375: 2345678, 25382: 2345702}
[2025-11-24 02:33:06] 2025-11-24 07:32:34,698 | INFO     | --------------------------------------------------
[2025-11-24 02:33:06] 2025-11-24 07:32:34,698 | INFO     | 
[2025-11-24 02:33:06] 2025-11-24 07:32:34,699 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 02:33:06] 2025-11-24 07:32:34,725 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 02:33:06] 2025-11-24 07:32:34,725 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 02:33:06] 2025-11-24 07:32:34,725 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 02:33:06] 2025-11-24 07:32:34,725 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 02:33:06] 2025-11-24 07:32:34,726 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 02:33:06] 2025-11-24 07:32:34,726 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 02:33:06] 2025-11-24 07:32:34,726 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 02:33:06] 2025-11-24 07:32:34,726 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 02:33:06] 2025-11-24 07:32:34,726 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 02:33:06] 2025-11-24 07:32:34,726 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 02:33:06] 2025-11-24 07:32:34,727 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 02:33:06] 2025-11-24 07:32:34,727 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 02:33:06] 2025-11-24 07:32:34,727 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 02:33:06] 2025-11-24 07:32:34,727 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 02:33:06] 2025-11-24 07:32:34,727 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 02:33:06] 2025-11-24 07:32:34,727 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 02:33:06] 2025-11-24 07:32:34,728 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 02:33:06] 2025-11-24 07:32:34,728 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 02:33:06] 2025-11-24 07:32:34,728 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 02:33:06] 2025-11-24 07:32:34,728 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 02:33:06] 2025-11-24 07:32:34,729 | INFO     | job 6895353436 has completed (purged errors)
[2025-11-24 02:33:06] 2025-11-24 07:32:34,729 | INFO     | overall cleanup function is called
[2025-11-24 02:33:06] 2025-11-24 07:32:35,744 | INFO     | --- collectZombieJob: --- 10, [19193]
[2025-11-24 02:33:06] 2025-11-24 07:32:35,744 | INFO     | zombie collector waiting for pid 19193
[2025-11-24 02:33:06] 2025-11-24 07:32:35,745 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 02:33:06] 2025-11-24 07:32:35,745 | INFO     | collected zombie processes
[2025-11-24 02:33:06] 2025-11-24 07:32:35,745 | INFO     | will attempt to kill all subprocesses of pid=19193
[2025-11-24 02:33:06] 2025-11-24 07:32:35,834 | INFO     | process IDs to be killed: [19193] (in reverse order)
[2025-11-24 02:33:06] 2025-11-24 07:32:35,886 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 02:33:06] 2025-11-24 07:32:35,886 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 02:33:06] 2025-11-24 07:32:35,890 | INFO     | did not find any defunct processes belonging to 19193
[2025-11-24 02:33:06] 2025-11-24 07:32:35,892 | INFO     | did not find any defunct processes belonging to 19193
[2025-11-24 02:33:06] 2025-11-24 07:32:35,894 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 02:33:06] 2025-11-24 07:32:35,894 | INFO     | ready for new job
[2025-11-24 02:33:06] 2025-11-24 07:32:35,895 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 02:33:06] 2025-11-24 07:32:35,897 | INFO     | ***************************************
[2025-11-24 02:33:06] 2025-11-24 07:32:35,897 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 02:33:06] 2025-11-24 07:32:35,897 | INFO     | ***************************************
[2025-11-24 02:33:06] 2025-11-24 07:32:35,897 | INFO     | 
[2025-11-24 02:33:06] 2025-11-24 07:32:35,897 | INFO     | architecture information:
[2025-11-24 02:33:06] 2025-11-24 07:32:35,898 | INFO     | executing command: cat /etc/os-release
[2025-11-24 02:33:06] 2025-11-24 07:32:35,913 | INFO     | cat /etc/os-release:
[2025-11-24 02:33:06] NAME="CentOS Linux"
[2025-11-24 02:33:06] VERSION="7 (Core)"
[2025-11-24 02:33:06] ID="centos"
[2025-11-24 02:33:06] ID_LIKE="rhel fedora"
[2025-11-24 02:33:06] VERSION_ID="7"
[2025-11-24 02:33:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 02:33:06] ANSI_COLOR="0;31"
[2025-11-24 02:33:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 02:33:06] HOME_URL="https://www.centos.org/"
[2025-11-24 02:33:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 02:33:06] 
[2025-11-24 02:33:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 02:33:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 02:33:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 02:33:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 02:33:06] 
[2025-11-24 02:33:06] 2025-11-24 07:32:35,913 | INFO     | ***************************************
[2025-11-24 02:33:06] 2025-11-24 07:32:36,416 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 02:33:06] 2025-11-24 07:32:36,435 | INFO     | sufficient remaining disk space (28243394560 B)
[2025-11-24 02:33:06] 2025-11-24 07:32:36,435 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 02:33:06] 2025-11-24 07:32:36,436 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 02:33:06] 2025-11-24 07:32:36,436 | INFO     | update_server=False
[2025-11-24 02:33:06] 2025-11-24 07:32:36,436 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 02:33:06] 2025-11-24 07:32:37,062 | INFO     | all data control threads have been joined
[2025-11-24 02:33:06] 2025-11-24 07:32:37,098 | INFO     | all payload control threads have been joined
[2025-11-24 02:33:06] 2025-11-24 07:32:37,394 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 02:33:06] 2025-11-24 07:32:37,394 | INFO     | aborting loop
[2025-11-24 02:33:06] 2025-11-24 07:32:37,441 | INFO     | [job] retrieve thread has finished
[2025-11-24 02:33:06] 2025-11-24 07:32:37,509 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 02:33:06] 2025-11-24 07:32:37,533 | INFO     | [data] copytool_in thread has finished
[2025-11-24 02:33:06] 2025-11-24 07:32:37,680 | INFO     | [job] validate thread has finished
[2025-11-24 02:33:06] 2025-11-24 07:32:37,702 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 02:33:06] 2025-11-24 07:32:37,940 | INFO     | all job control threads have been joined
[2025-11-24 02:33:06] 2025-11-24 07:32:38,042 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 02:33:06] 2025-11-24 07:32:38,068 | INFO     | [data] control thread has finished
[2025-11-24 02:33:06] 2025-11-24 07:32:38,104 | INFO     | [payload] control thread has finished
[2025-11-24 02:33:06] 2025-11-24 07:32:38,180 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 02:33:06] 2025-11-24 07:32:38,235 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 02:33:06] 2025-11-24 07:32:38,400 | INFO     | [job] job monitor thread has finished
[2025-11-24 02:33:06] 2025-11-24 07:32:38,451 | INFO     | [payload] failed_post thread has finished
[2025-11-24 02:33:06] 2025-11-24 07:32:38,897 | INFO     | [payload] validate_post thread has finished
[2025-11-24 02:33:06] 2025-11-24 07:32:38,910 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 02:33:06] 2025-11-24 07:32:38,945 | INFO     | [job] control thread has finished
[2025-11-24 02:33:06] 2025-11-24 07:32:39,236 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 02:33:06] 2025-11-24 07:32:39,515 | INFO     | [data] copytool_out thread has finished
[2025-11-24 02:33:06] 2025-11-24 07:32:40,242 | INFO     | [job] queue monitor thread has finished
[2025-11-24 02:33:06] 2025-11-24 07:32:41,708 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 02:33:06] 2025-11-24 07:32:56,781 | INFO     | [monitor] cgroup control has ended
[2025-11-24 02:33:06] 2025-11-24 07:32:58,422 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140481753761600)>', '<ExcThread(monitor, started 140481308641024)>']
[2025-11-24 02:33:06] 2025-11-24 07:33:03,448 | INFO     | all workflow threads have been joined
[2025-11-24 02:33:06] 2025-11-24 07:33:03,448 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 02:33:06] 2025-11-24 07:33:03,449 | INFO     | traces error code: 0
[2025-11-24 02:33:06] 2025-11-24 07:33:03,449 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 02:33:06] 2025-11-24 07:33:06,120 | INFO     | PID=12826 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 02:33:06] 2025-11-24 07:33:06,120 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 02:33:06] 2025-11-24 07:33:06,120 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 02:33:06] 2025-11-24 07:33:06,120 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 02:33:06] 2025-11-24 07:33:06,120 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 02:33:06] 2025-11-24 07:33:06,120 | INFO     | [monitor] control thread has ended
[2025-11-24 02:33:06] 2025-11-24 07:33:06,218 [wrapper] ==== pilot stdout END ====
[2025-11-24 02:33:06] 2025-11-24 07:33:06,222 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 02:33:06] 2025-11-24 07:33:06,225 [wrapper] pilotpid: 12826
[2025-11-24 02:33:06] 2025-11-24 07:33:06,229 [wrapper] Pilot exit status: 0
[2025-11-24 02:33:06] 2025-11-24 07:33:06,242 [wrapper] pandaids: 6895353436
[2025-11-24 02:33:06] 2025-11-24 07:33:06,281 [wrapper] cleanup supervisor_pilot  3748 12827
[2025-11-24 02:33:06] 2025-11-24 07:33:06,285 [wrapper] Test setup, not cleaning
[2025-11-24 02:33:06] 2025-11-24 07:33:06,289 [wrapper] apfmon messages muted
[2025-11-24 02:33:06] 2025-11-24 07:33:06,293 [wrapper] ==== wrapper stdout END ====
[2025-11-24 02:33:06] 2025-11-24 07:33:06,297 [wrapper] ==== wrapper stderr END ====
[2025-11-24 02:33:06]  *** Error codes and diagnostics ***
[2025-11-24 02:33:06]     "exeErrorCode": 0,
[2025-11-24 02:33:06]     "exeErrorDiag": "",
[2025-11-24 02:33:06]     "pilotErrorCode": 0,
[2025-11-24 02:33:06]     "pilotErrorDiag": "",
[2025-11-24 02:33:06]  *** Listing of results directory ***
[2025-11-24 02:33:06] total 1309148
[2025-11-24 02:33:06] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 23:55 pilot3.tar.gz
[2025-11-24 02:33:06] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 00:12 queuedata.json
[2025-11-24 02:33:06] -rwx------ 1 boincer umatlas     36292 Nov 23 00:13 runpilot2-wrapper.sh
[2025-11-24 02:33:06] -rw-r--r-- 1 boincer umatlas       100 Nov 23 19:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 02:33:06] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 19:28 run_atlas
[2025-11-24 02:33:06] -rw-r--r-- 1 boincer umatlas       105 Nov 23 19:28 job.xml
[2025-11-24 02:33:06] -rw-r--r-- 2 boincer umatlas 411230018 Nov 23 19:28 EVNT.47483658._000623.pool.root.1
[2025-11-24 02:33:06] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 19:28 start_atlas.sh
[2025-11-24 02:33:06] drwxrwx--x 2 boincer umatlas      4096 Nov 23 19:28 shared
[2025-11-24 02:33:06] -rw-r--r-- 2 boincer umatlas    590100 Nov 23 19:28 input.tar.gz
[2025-11-24 02:33:06] -rw-r--r-- 1 boincer umatlas         0 Nov 23 19:28 boinc_lockfile
[2025-11-24 02:33:06] -rw-r--r-- 1 boincer umatlas      2786 Nov 23 19:29 pandaJob.out
[2025-11-24 02:33:06] -rw------- 1 boincer umatlas        57 Nov 23 19:29 setup.sh.local
[2025-11-24 02:33:06] -rw------- 1 boincer umatlas    989786 Nov 23 19:29 agis_schedconf.cvmfs.json
[2025-11-24 02:33:06] drwx------ 5 boincer umatlas      4096 Nov 23 19:29 pilot3
[2025-11-24 02:33:06] -rw-r--r-- 1 boincer umatlas       533 Nov 24 02:22 boinc_task_state.xml
[2025-11-24 02:33:06] -rw-r--r-- 1 boincer umatlas      5956 Nov 24 02:31 init_data.xml
[2025-11-24 02:33:06] -rw------- 1 boincer umatlas 913925151 Nov 24 02:31 HITS.47556137._006187.pool.root.1
[2025-11-24 02:33:06] -rw------- 1 boincer umatlas      1065 Nov 24 02:32 memory_monitor_summary.json
[2025-11-24 02:33:06] -rw------- 1 boincer umatlas   1526164 Nov 24 02:32 agis_ddmendpoints.agis.ALL.json
[2025-11-24 02:33:06] -rw------- 1 boincer umatlas        95 Nov 24 02:32 pilot_heartbeat.json
[2025-11-24 02:33:06] -rw------- 1 boincer umatlas   2188098 Nov 24 02:32 log.47556137._006187.job.log.tgz.1
[2025-11-24 02:33:06] -rw------- 1 boincer umatlas      8679 Nov 24 02:32 heartbeat.json
[2025-11-24 02:33:06] -rw-r--r-- 1 boincer umatlas        29 Nov 24 02:32 wrapper_checkpoint.txt
[2025-11-24 02:33:06] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 02:32 boinc_mmap_file
[2025-11-24 02:33:06] -rw------- 1 boincer umatlas       745 Nov 24 02:33 pilotlog.txt
[2025-11-24 02:33:06] -rw------- 1 boincer umatlas   3558975 Nov 24 02:33 log.47556137._006187.job.log.1
[2025-11-24 02:33:06] -rw------- 1 boincer umatlas       353 Nov 24 02:33 output.list
[2025-11-24 02:33:06] -rw-r--r-- 1 boincer umatlas       620 Nov 24 02:33 runtime_log
[2025-11-24 02:33:06] -rw------- 1 boincer umatlas   5765120 Nov 24 02:33 result.tar.gz
[2025-11-24 02:33:06] -rw------- 1 boincer umatlas       670 Nov 24 02:33 xV3NDmgaHh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmAeKKDml2dI2n.diag
[2025-11-24 02:33:06] -rw-r--r-- 1 boincer umatlas      9345 Nov 24 02:33 runtime_log.err
[2025-11-24 02:33:06] -rw-r--r-- 1 boincer umatlas     21345 Nov 24 02:33 stderr.txt
[2025-11-24 02:33:06] HITS file was successfully produced:
[2025-11-24 02:33:06] -rw------- 1 boincer umatlas 913925151 Nov 24 02:31 shared/HITS.pool.root.1
[2025-11-24 02:33:06]  *** Contents of shared directory: ***
[2025-11-24 02:33:06] total 1300332
[2025-11-24 02:33:06] -rw-r--r-- 2 boincer umatlas 411230018 Nov 23 19:28 ATLAS.root_0
[2025-11-24 02:33:06] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 19:28 start_atlas.sh
[2025-11-24 02:33:06] -rw-r--r-- 2 boincer umatlas    590100 Nov 23 19:28 input.tar.gz
[2025-11-24 02:33:06] -rw------- 1 boincer umatlas 913925151 Nov 24 02:31 HITS.pool.root.1
[2025-11-24 02:33:06] -rw------- 1 boincer umatlas   5765120 Nov 24 02:33 result.tar.gz
02:33:07 (8986): run_atlas exited; CPU time 284880.010902
02:33:07 (8986): called boinc_finish(0)

</stderr_txt>
]]>

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