Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:00:09 (3106485): wrapper (7.7.26015): starting
23:00:09 (3106485): wrapper: running run_atlas (--nthreads 6)
[2025-11-25 23:00:09] Arguments: --nthreads 6
[2025-11-25 23:00:09] Threads: 6
[2025-11-25 23:00:09] Checking for CVMFS
[2025-11-25 23:00:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 23:00:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 23:00:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 23:00:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 23:00:10] 2.13.3.0 3071455 5 54668 153284 3 88 43260726 52428801 1330 130560 0 116783 99.986 2812 78 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-11-25 23:00:10] CVMFS is ok
[2025-11-25 23:00:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 23:00:10] Checking for apptainer binary...
[2025-11-25 23:00:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 23:00:10] Running /usr/bin/apptainer --version
[2025-11-25 23:00:10] apptainer version 1.4.4-1.el9
[2025-11-25 23:00:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 23:00:10] testio008
[2025-11-25 23:00:10] apptainer works
[2025-11-25 23:00:10] Set ATHENA_PROC_NUMBER=6
[2025-11-25 23:00:10] Set ATHENA_CORE_NUMBER=6
[2025-11-25 23:00:10] Starting ATLAS job with PandaID=6895353364
[2025-11-25 23:00:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 06:04:28]  *** The last 200 lines of the pilot log: ***
[2025-11-26 06:04:28] 2025-11-25 21:03:55,896 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 06:04:28] 2025-11-25 21:03:55,896 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 06:04:28] 2025-11-25 21:03:55,898 | INFO     | fitting pss+swap vs Time
[2025-11-26 06:04:28] 2025-11-25 21:03:55,898 | INFO     | sum of square deviations: 22323172040.0
[2025-11-26 06:04:28] 2025-11-25 21:03:55,899 | INFO     | sum of deviations: 441553821823.0
[2025-11-26 06:04:28] 2025-11-25 21:03:55,899 | INFO     | mean x: 1764091891.5
[2025-11-26 06:04:28] 2025-11-25 21:03:55,899 | INFO     | mean y: 2590321.9759615385
[2025-11-26 06:04:28] 2025-11-25 21:03:55,899 | INFO     | intersect: -34891264159.95142
[2025-11-26 06:04:28] 2025-11-25 21:03:55,899 | INFO     | chi2: 6.890607181078185
[2025-11-26 06:04:28] 2025-11-25 21:03:55,900 | INFO     | sum of square deviations: 21527882710.0
[2025-11-26 06:04:28] 2025-11-25 21:03:55,901 | INFO     | sum of deviations: 545783357333.0
[2025-11-26 06:04:28] 2025-11-25 21:03:55,901 | INFO     | mean x: 1764091739.0
[2025-11-26 06:04:28] 2025-11-25 21:03:55,901 | INFO     | mean y: 2610284.136253041
[2025-11-26 06:04:28] 2025-11-25 21:03:55,901 | INFO     | intersect: -44721337951.96181
[2025-11-26 06:04:28] 2025-11-25 21:03:55,901 | INFO     | chi2: 4.481816650353112
[2025-11-26 06:04:28] 2025-11-25 21:03:55,901 | INFO     | current chi2=4.481816650353112 (change=34.95759469992258 %)
[2025-11-26 06:04:28] 2025-11-25 21:03:55,901 | INFO     | sum of square deviations: 20751710017.5
[2025-11-26 06:04:28] 2025-11-25 21:03:55,902 | INFO     | sum of deviations: 532064197900.0
[2025-11-26 06:04:28] 2025-11-25 21:03:55,902 | INFO     | mean x: 1764091586.5
[2025-11-26 06:04:28] 2025-11-25 21:03:55,902 | INFO     | mean y: 2607588.81773399
[2025-11-26 06:04:28] 2025-11-25 21:03:55,902 | INFO     | intersect: -45227880607.17804
[2025-11-26 06:04:28] 2025-11-25 21:03:55,902 | INFO     | chi2: 4.48171096040914
[2025-11-26 06:04:28] 2025-11-25 21:03:55,902 | INFO     | current chi2=4.48171096040914 (change=0.002358194281852805 %)
[2025-11-26 06:04:28] 2025-11-25 21:03:55,902 | INFO     | right removable region: 405
[2025-11-26 06:04:28] 2025-11-25 21:03:55,902 | INFO     | sum of square deviations: 21527882710.0
[2025-11-26 06:04:28] 2025-11-25 21:03:55,903 | INFO     | sum of deviations: 316095334346.99994
[2025-11-26 06:04:28] 2025-11-25 21:03:55,903 | INFO     | mean x: 1764092044.0
[2025-11-26 06:04:28] 2025-11-25 21:03:55,903 | INFO     | mean y: 2614359.581508516
[2025-11-26 06:04:28] 2025-11-25 21:03:55,903 | INFO     | intersect: -25899666509.314144
[2025-11-26 06:04:28] 2025-11-25 21:03:55,904 | INFO     | chi2: 3.9644958282141225
[2025-11-26 06:04:28] 2025-11-25 21:03:55,904 | INFO     | current chi2=3.9644958282141225 (change=42.46521788238419 %)
[2025-11-26 06:04:28] 2025-11-25 21:03:55,904 | INFO     | sum of square deviations: 20751710017.5
[2025-11-26 06:04:28] 2025-11-25 21:03:55,905 | INFO     | sum of deviations: 228225850027.49997
[2025-11-26 06:04:28] 2025-11-25 21:03:55,905 | INFO     | mean x: 1764092196.5
[2025-11-26 06:04:28] 2025-11-25 21:03:55,905 | INFO     | mean y: 2631590.879310345
[2025-11-26 06:04:28] 2025-11-25 21:03:55,905 | INFO     | intersect: -19398730549.08738
[2025-11-26 06:04:28] 2025-11-25 21:03:55,905 | INFO     | chi2: 2.524796290519302
[2025-11-26 06:04:28] 2025-11-25 21:03:55,905 | INFO     | current chi2=2.524796290519302 (change=36.31482034736705 %)
[2025-11-26 06:04:28] 2025-11-25 21:03:55,905 | INFO     | sum of square deviations: 19994421400.0
[2025-11-26 06:04:28] 2025-11-25 21:03:55,906 | INFO     | sum of deviations: 208682062192.99985
[2025-11-26 06:04:28] 2025-11-25 21:03:55,906 | INFO     | mean x: 1764092349.0
[2025-11-26 06:04:28] 2025-11-25 21:03:55,906 | INFO     | mean y: 2635520.805486284
[2025-11-26 06:04:28] 2025-11-25 21:03:55,906 | INFO     | intersect: -18409221562.901535
[2025-11-26 06:04:28] 2025-11-25 21:03:55,906 | INFO     | chi2: 2.5024056244547936
[2025-11-26 06:04:28] 2025-11-25 21:03:55,906 | INFO     | current chi2=2.5024056244547936 (change=0.8868305989115359 %)
[2025-11-26 06:04:28] 2025-11-25 21:03:55,906 | INFO     | left removable region: 30
[2025-11-26 06:04:28] 2025-11-25 21:03:55,906 | INFO     | sum of square deviations: 16351934500.0
[2025-11-26 06:04:28] 2025-11-25 21:03:55,907 | INFO     | sum of deviations: 254360058708.0
[2025-11-26 06:04:28] 2025-11-25 21:03:55,907 | INFO     | mean x: 1764092471.0
[2025-11-26 06:04:28] 2025-11-25 21:03:55,907 | INFO     | mean y: 2664275.1573333335
[2025-11-26 06:04:28] 2025-11-25 21:03:55,907 | INFO     | intersect: -27438410937.680683
[2025-11-26 06:04:28] 2025-11-25 21:03:55,907 | INFO     | chi2: 0.019138795329588256
[2025-11-26 06:04:28] 2025-11-25 21:03:55,907 | INFO     | current memory leak: 15.56 B/s (using 375 data points, chi2=0.02)
[2025-11-26 06:04:28] 2025-11-25 21:03:55,908 | INFO     | could have reported an average CPU frequency of 3499 MHz (17 samples)
[2025-11-26 06:04:28] 2025-11-25 21:03:55,908 | INFO     | ..............................
[2025-11-26 06:04:28] 2025-11-25 21:03:55,908 | INFO     | . Timing measurements:
[2025-11-26 06:04:28] 2025-11-25 21:03:55,908 | INFO     | . get job = 0 s
[2025-11-26 06:04:28] 2025-11-25 21:03:55,908 | INFO     | . initial setup = 3 s
[2025-11-26 06:04:28] 2025-11-25 21:03:55,908 | INFO     | . payload setup = 2 s
[2025-11-26 06:04:28] 2025-11-25 21:03:55,908 | INFO     | . stage-in = 0 s
[2025-11-26 06:04:28] 2025-11-25 21:03:55,908 | INFO     | . payload execution = 25366 s
[2025-11-26 06:04:28] 2025-11-25 21:03:55,908 | INFO     | . stage-out = 3 s
[2025-11-26 06:04:28] 2025-11-25 21:03:55,908 | INFO     | . log creation = 0 s
[2025-11-26 06:04:28] 2025-11-25 21:03:55,908 | INFO     | ..............................
[2025-11-26 06:04:28] 2025-11-25 21:03:55,931 | INFO     | 
[2025-11-26 06:04:28] 2025-11-25 21:03:55,931 | INFO     | job summary report
[2025-11-26 06:04:28] 2025-11-25 21:03:55,931 | INFO     | --------------------------------------------------
[2025-11-26 06:04:28] 2025-11-25 21:03:55,931 | INFO     | PanDA job id: 6895353364
[2025-11-26 06:04:28] 2025-11-25 21:03:55,931 | INFO     | task id: 47556137
[2025-11-26 06:04:28] 2025-11-25 21:03:55,931 | INFO     | errors: (none)
[2025-11-26 06:04:28] 2025-11-25 21:03:55,931 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 06:04:28] 2025-11-25 21:03:55,931 | INFO     | pilot state: finished 
[2025-11-26 06:04:28] 2025-11-25 21:03:55,931 | INFO     | transexitcode: 0
[2025-11-26 06:04:28] 2025-11-25 21:03:55,931 | INFO     | exeerrorcode: 0
[2025-11-26 06:04:28] 2025-11-25 21:03:55,931 | INFO     | exeerrordiag: 
[2025-11-26 06:04:28] 2025-11-25 21:03:55,931 | INFO     | exitcode: 0
[2025-11-26 06:04:28] 2025-11-25 21:03:55,931 | INFO     | exitmsg: OK
[2025-11-26 06:04:28] 2025-11-25 21:03:55,931 | INFO     | cpuconsumptiontime: 145203 s
[2025-11-26 06:04:28] 2025-11-25 21:03:55,931 | INFO     | nevents: 1000
[2025-11-26 06:04:28] 2025-11-25 21:03:55,931 | INFO     | neventsw: 0
[2025-11-26 06:04:28] 2025-11-25 21:03:55,931 | INFO     | pid: 3117060
[2025-11-26 06:04:28] 2025-11-25 21:03:55,931 | INFO     | pgrp: 3117060
[2025-11-26 06:04:28] 2025-11-25 21:03:55,931 | INFO     | corecount: 6
[2025-11-26 06:04:28] 2025-11-25 21:03:55,931 | INFO     | event service: False
[2025-11-26 06:04:28] 2025-11-25 21:03:55,931 | INFO     | sizes: {0: 2284316, 2: 2284578, 11: 2284606, 25372: 2321408, 25373: 2321407, 25376: 2330459, 25377: 2330643, 25406: 2330953}
[2025-11-26 06:04:28] 2025-11-25 21:03:55,931 | INFO     | --------------------------------------------------
[2025-11-26 06:04:28] 2025-11-25 21:03:55,931 | INFO     | 
[2025-11-26 06:04:28] 2025-11-25 21:03:55,931 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-11-26 06:04:28] 2025-11-25 21:03:55,937 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 06:04:28] 2025-11-25 21:03:55,937 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 06:04:28] 2025-11-25 21:03:55,937 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 06:04:28] 2025-11-25 21:03:55,937 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 06:04:28] 2025-11-25 21:03:55,937 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 06:04:28] 2025-11-25 21:03:55,937 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 06:04:28] 2025-11-25 21:03:55,937 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 06:04:28] 2025-11-25 21:03:55,937 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 06:04:28] 2025-11-25 21:03:55,937 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 06:04:28] 2025-11-25 21:03:55,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 06:04:28] 2025-11-25 21:03:55,937 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 06:04:28] 2025-11-25 21:03:55,937 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 06:04:28] 2025-11-25 21:03:55,937 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 06:04:28] 2025-11-25 21:03:55,937 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 06:04:28] 2025-11-25 21:03:55,937 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 06:04:28] 2025-11-25 21:03:55,937 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 06:04:28] 2025-11-25 21:03:55,937 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 06:04:28] 2025-11-25 21:03:55,937 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 06:04:28] 2025-11-25 21:03:55,937 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 06:04:28] 2025-11-25 21:03:55,937 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 06:04:28] 2025-11-25 21:03:55,937 | INFO     | job 6895353364 has completed (purged errors)
[2025-11-26 06:04:28] 2025-11-25 21:03:55,937 | INFO     | overall cleanup function is called
[2025-11-26 06:04:28] 2025-11-25 21:03:56,945 | INFO     | --- collectZombieJob: --- 10, [3117060]
[2025-11-26 06:04:28] 2025-11-25 21:03:56,945 | INFO     | zombie collector waiting for pid 3117060
[2025-11-26 06:04:28] 2025-11-25 21:03:56,945 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 06:04:28] 2025-11-25 21:03:56,945 | INFO     | collected zombie processes
[2025-11-26 06:04:28] 2025-11-25 21:03:56,945 | INFO     | will attempt to kill all subprocesses of pid=3117060
[2025-11-26 06:04:28] 2025-11-25 21:03:56,964 | INFO     | process IDs to be killed: [3117060] (in reverse order)
[2025-11-26 06:04:28] 2025-11-25 21:03:56,977 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 06:04:28] 2025-11-25 21:03:56,977 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 06:04:28] 2025-11-25 21:03:56,978 | INFO     | did not find any defunct processes belonging to 3117060
[2025-11-26 06:04:28] 2025-11-25 21:03:56,979 | INFO     | did not find any defunct processes belonging to 3117060
[2025-11-26 06:04:28] 2025-11-25 21:03:56,979 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 06:04:28] 2025-11-25 21:03:56,979 | INFO     | ready for new job
[2025-11-26 06:04:28] 2025-11-25 21:03:56,979 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 06:04:28] 2025-11-25 21:03:56,980 | INFO     | ***************************************
[2025-11-26 06:04:28] 2025-11-25 21:03:56,980 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 06:04:28] 2025-11-25 21:03:56,980 | INFO     | ***************************************
[2025-11-26 06:04:28] 2025-11-25 21:03:56,980 | INFO     | 
[2025-11-26 06:04:28] 2025-11-25 21:03:56,980 | INFO     | architecture information:
[2025-11-26 06:04:28] 2025-11-25 21:03:56,981 | INFO     | executing command: cat /etc/os-release
[2025-11-26 06:04:28] 2025-11-25 21:03:56,985 | INFO     | cat /etc/os-release:
[2025-11-26 06:04:28] NAME="CentOS Linux"
[2025-11-26 06:04:28] VERSION="7 (Core)"
[2025-11-26 06:04:28] ID="centos"
[2025-11-26 06:04:28] ID_LIKE="rhel fedora"
[2025-11-26 06:04:28] VERSION_ID="7"
[2025-11-26 06:04:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 06:04:28] ANSI_COLOR="0;31"
[2025-11-26 06:04:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 06:04:28] HOME_URL="https://www.centos.org/"
[2025-11-26 06:04:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 06:04:28] 
[2025-11-26 06:04:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 06:04:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 06:04:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 06:04:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 06:04:28] 
[2025-11-26 06:04:28] 2025-11-25 21:03:56,985 | INFO     | ***************************************
[2025-11-26 06:04:28] 2025-11-25 21:03:57,488 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-11-26 06:04:28] 2025-11-25 21:03:57,494 | INFO     | sufficient remaining disk space (288186433536 B)
[2025-11-26 06:04:28] 2025-11-25 21:03:57,494 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 06:04:28] 2025-11-25 21:03:57,494 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 06:04:28] 2025-11-25 21:03:57,494 | INFO     | update_server=False
[2025-11-26 06:04:28] 2025-11-25 21:03:57,494 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 06:04:28] 2025-11-25 21:03:57,494 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:04:28] 2025-11-25 21:03:57,494 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:04:28] 2025-11-25 21:03:57,494 | INFO     | aborting loop
[2025-11-26 06:04:28] 2025-11-25 21:03:57,819 | INFO     | all data control threads have been joined
[2025-11-26 06:04:28] 2025-11-25 21:03:58,499 | INFO     | [job] queue monitor thread has finished
[2025-11-26 06:04:28] 2025-11-25 21:03:58,499 | INFO     | [job] retrieve thread has finished
[2025-11-26 06:04:28] 2025-11-25 21:03:58,499 | INFO     | [job] job monitor thread has finished
[2025-11-26 06:04:28] 2025-11-25 21:03:58,579 | INFO     | [payload] validate_post thread has finished
[2025-11-26 06:04:28] 2025-11-25 21:03:58,660 | INFO     | all payload control threads have been joined
[2025-11-26 06:04:28] 2025-11-25 21:03:58,784 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 06:04:28] 2025-11-25 21:03:58,825 | INFO     | [data] control thread has finished
[2025-11-26 06:04:28] 2025-11-25 21:03:58,935 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 06:04:28] 2025-11-25 21:03:59,172 | INFO     | all job control threads have been joined
[2025-11-26 06:04:28] 2025-11-25 21:03:59,177 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 06:04:28] 2025-11-25 21:03:59,353 | INFO     | [payload] failed_post thread has finished
[2025-11-26 06:04:28] 2025-11-25 21:03:59,374 | INFO     | [monitor] cgroup control has ended
[2025-11-26 06:04:28] 2025-11-25 21:03:59,593 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 06:04:28] 2025-11-25 21:03:59,632 | INFO     | [data] copytool_in thread has finished
[2025-11-26 06:04:28] 2025-11-25 21:03:59,641 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 06:04:28] 2025-11-25 21:03:59,665 | INFO     | [payload] control thread has finished
[2025-11-26 06:04:28] 2025-11-25 21:03:59,670 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 06:04:28] 2025-11-25 21:03:59,720 | INFO     | [job] validate thread has finished
[2025-11-26 06:04:28] 2025-11-25 21:04:00,177 | INFO     | [job] control thread has finished
[2025-11-26 06:04:28] 2025-11-25 21:04:00,941 | INFO     | [data] copytool_out thread has finished
[2025-11-26 06:04:28] 2025-11-25 21:04:03,675 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 06:04:28] 2025-11-25 21:04:04,877 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140203867432768)>', '<ExcThread(monitor, started 140203058505472)>']
[2025-11-26 06:04:28] 2025-11-25 21:04:09,902 | INFO     | all workflow threads have been joined
[2025-11-26 06:04:28] 2025-11-25 21:04:09,902 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 06:04:28] 2025-11-25 21:04:09,902 | INFO     | traces error code: 0
[2025-11-26 06:04:28] 2025-11-25 21:04:09,902 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 06:04:28] 2025-11-25 21:04:28,035 | INFO     | PID=3110297 has CPU usage=0.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 06:04:28] 2025-11-25 21:04:28,035 | INFO     | .. there are 2 such processes running
[2025-11-26 06:04:28] 2025-11-25 21:04:28,035 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 06:04:28] 2025-11-25 21:04:28,035 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 06:04:28] 2025-11-25 21:04:28,035 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 06:04:28] 2025-11-25 21:04:28,035 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 06:04:28] 2025-11-25 21:04:28,035 | INFO     | [monitor] control thread has ended
[2025-11-26 06:04:28] 2025-11-25 21:04:28,065 [wrapper] ==== pilot stdout END ====
[2025-11-26 06:04:28] 2025-11-25 21:04:28,067 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 06:04:28] 2025-11-25 21:04:28,067 [wrapper] pilotpid: 3110297
[2025-11-26 06:04:28] 2025-11-25 21:04:28,068 [wrapper] Pilot exit status: 0
[2025-11-26 06:04:28] 2025-11-25 21:04:28,074 [wrapper] pandaids: 6895353364
[2025-11-26 06:04:28] 2025-11-25 21:04:28,080 [wrapper] cleanup supervisor_pilot 3221413 3110298
[2025-11-26 06:04:28] 2025-11-25 21:04:28,081 [wrapper] Test setup, not cleaning
[2025-11-26 06:04:28] 2025-11-25 21:04:28,082 [wrapper] apfmon messages muted
[2025-11-26 06:04:28] 2025-11-25 21:04:28,083 [wrapper] ==== wrapper stdout END ====
[2025-11-26 06:04:28] 2025-11-25 21:04:28,084 [wrapper] ==== wrapper stderr END ====
[2025-11-26 06:04:28]  *** Error codes and diagnostics ***
[2025-11-26 06:04:28]     "exeErrorCode": 0,
[2025-11-26 06:04:28]     "exeErrorDiag": "",
[2025-11-26 06:04:28]     "pilotErrorCode": 0,
[2025-11-26 06:04:28]     "pilotErrorDiag": "",
[2025-11-26 06:04:28]  *** Listing of results directory ***
[2025-11-26 06:04:28] total 1308224
[2025-11-26 06:04:28] -rw-r--r--. 1 boinc boinc    576529 Nov 23 13:55 pilot3.tar.gz
[2025-11-26 06:04:28] -rwx------. 1 boinc boinc     36292 Nov 23 14:12 runpilot2-wrapper.sh
[2025-11-26 06:04:28] -rw-r--r--. 1 boinc boinc      5112 Nov 23 14:12 queuedata.json
[2025-11-26 06:04:28] -rw-r--r--. 1 boinc boinc       100 Nov 25 23:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 06:04:28] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 23:00 run_atlas
[2025-11-26 06:04:28] -rw-r--r--. 1 boinc boinc       105 Nov 25 23:00 job.xml
[2025-11-26 06:04:28] -rw-r--r--. 2 boinc boinc 410852647 Nov 25 23:00 EVNT.47483658._000619.pool.root.1
[2025-11-26 06:04:28] -rw-r--r--. 2 boinc boinc     15847 Nov 25 23:00 start_atlas.sh
[2025-11-26 06:04:28] drwxrwx--x. 2 boinc boinc        68 Nov 25 23:00 shared
[2025-11-26 06:04:28] -rw-r--r--. 2 boinc boinc    590100 Nov 25 23:00 input.tar.gz
[2025-11-26 06:04:28] -rw-r--r--. 1 boinc boinc      9516 Nov 25 23:00 init_data.xml
[2025-11-26 06:04:28] -rw-r--r--. 1 boinc boinc         0 Nov 25 23:00 boinc_lockfile
[2025-11-26 06:04:28] -rw-r--r--. 1 boinc boinc      2786 Nov 25 23:00 pandaJob.out
[2025-11-26 06:04:28] -rw-------. 1 boinc boinc    991909 Nov 25 23:00 agis_schedconf.cvmfs.json
[2025-11-26 06:04:28] drwx------. 5 boinc boinc      4096 Nov 25 23:00 pilot3
[2025-11-26 06:04:28] -rw-r--r--. 1 boinc boinc       533 Nov 26 05:57 boinc_task_state.xml
[2025-11-26 06:04:28] -rw-------. 1 boinc boinc 914747331 Nov 26 06:03 HITS.47556137._006145.pool.root.1
[2025-11-26 06:04:28] -rw-------. 1 boinc boinc      1030 Nov 26 06:03 memory_monitor_summary.json
[2025-11-26 06:04:28] -rw-------. 1 boinc boinc   1516240 Nov 26 06:03 agis_ddmendpoints.agis.ALL.json
[2025-11-26 06:04:28] -rw-------. 1 boinc boinc   1463548 Nov 26 06:03 log.47556137._006145.job.log.tgz.1
[2025-11-26 06:04:28] -rw-------. 1 boinc boinc      8585 Nov 26 06:03 heartbeat.json
[2025-11-26 06:04:28] -rw-r--r--. 1 boinc boinc      8192 Nov 26 06:04 boinc_mmap_file
[2025-11-26 06:04:28] -rw-r--r--. 1 boinc boinc        29 Nov 26 06:04 wrapper_checkpoint.txt
[2025-11-26 06:04:28] -rw-------. 1 boinc boinc       822 Nov 26 06:04 pilotlog.txt
[2025-11-26 06:04:28] -rw-------. 1 boinc boinc        95 Nov 26 06:04 pilot_heartbeat.json
[2025-11-26 06:04:28] -rw-------. 1 boinc boinc   3598276 Nov 26 06:04 log.47556137._006145.job.log.1
[2025-11-26 06:04:28] -rw-------. 1 boinc boinc       353 Nov 26 06:04 output.list
[2025-11-26 06:04:28] -rw-r--r--. 1 boinc boinc       620 Nov 26 06:04 runtime_log
[2025-11-26 06:04:28] -rw-------. 1 boinc boinc   5079040 Nov 26 06:04 result.tar.gz
[2025-11-26 06:04:28] -rw-r--r--. 1 boinc boinc      8792 Nov 26 06:04 runtime_log.err
[2025-11-26 06:04:28] -rw-------. 1 boinc boinc       650 Nov 26 06:04 aBpKDmhZHh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmedKKDmnaAy5n.diag
[2025-11-26 06:04:28] -rw-r--r--. 1 boinc boinc     20728 Nov 26 06:04 stderr.txt
[2025-11-26 06:04:28] HITS file was successfully produced:
[2025-11-26 06:04:28] -rw-------. 1 boinc boinc 914747331 Nov 26 06:03 shared/HITS.pool.root.1
[2025-11-26 06:04:28]  *** Contents of shared directory: ***
[2025-11-26 06:04:28] total 1300088
[2025-11-26 06:04:28] -rw-r--r--. 2 boinc boinc 410852647 Nov 25 23:00 ATLAS.root_0
[2025-11-26 06:04:28] -rw-r--r--. 2 boinc boinc     15847 Nov 25 23:00 start_atlas.sh
[2025-11-26 06:04:28] -rw-r--r--. 2 boinc boinc    590100 Nov 25 23:00 input.tar.gz
[2025-11-26 06:04:28] -rw-------. 1 boinc boinc 914747331 Nov 26 06:03 HITS.pool.root.1
[2025-11-26 06:04:28] -rw-------. 1 boinc boinc   5079040 Nov 26 06:04 result.tar.gz
06:04:29 (3106485): run_atlas exited; CPU time 145282.592064
06:04:29 (3106485): called boinc_finish(0)

</stderr_txt>
]]>

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