Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:58:55 (3089199): wrapper (7.7.26015): starting
22:58:55 (3089199): wrapper: running run_atlas (--nthreads 6)
[2025-11-25 22:58:55] Arguments: --nthreads 6
[2025-11-25 22:58:55] Threads: 6
[2025-11-25 22:58:55] Checking for CVMFS
[2025-11-25 22:58:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 22:58:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 22:58:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 22:58:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 22:58:56] 2.13.3.0 3071455 4 53148 153284 0 88 43260726 52428801 680 130560 0 58377 99.971 2812 79 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-11-25 22:58:56] CVMFS is ok
[2025-11-25 22:58:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 22:58:56] Checking for apptainer binary...
[2025-11-25 22:58:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 22:58:56] Running /usr/bin/apptainer --version
[2025-11-25 22:58:56] apptainer version 1.4.4-1.el9
[2025-11-25 22:58:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 22:58:56] testio008
[2025-11-25 22:58:56] apptainer works
[2025-11-25 22:58:56] Set ATHENA_PROC_NUMBER=6
[2025-11-25 22:58:56] Set ATHENA_CORE_NUMBER=6
[2025-11-25 22:58:56] Starting ATLAS job with PandaID=6895353411
[2025-11-25 22:58:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 06:04:51]  *** The last 200 lines of the pilot log: ***
[2025-11-26 06:04:51] 2025-11-25 21:03:55,893 | INFO     | extracted standard info from prmon json
[2025-11-26 06:04:51] 2025-11-25 21:03:55,893 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 06:04:51] 2025-11-25 21:03:55,893 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 06:04:51] 2025-11-25 21:03:55,895 | INFO     | fitting pss+swap vs Time
[2025-11-26 06:04:51] 2025-11-25 21:03:55,895 | INFO     | sum of square deviations: 22484544368.0
[2025-11-26 06:04:51] 2025-11-25 21:03:55,896 | INFO     | sum of deviations: 450072182378.0
[2025-11-26 06:04:51] 2025-11-25 21:03:55,896 | INFO     | mean x: 1764091850.0
[2025-11-26 06:04:51] 2025-11-25 21:03:55,896 | INFO     | mean y: 2614883.158273381
[2025-11-26 06:04:51] 2025-11-25 21:03:55,896 | INFO     | intersect: -35309137752.34185
[2025-11-26 06:04:51] 2025-11-25 21:03:55,897 | INFO     | chi2: 7.24169266211686
[2025-11-26 06:04:51] 2025-11-25 21:03:55,897 | INFO     | sum of square deviations: 21685403803.0
[2025-11-26 06:04:51] 2025-11-25 21:03:55,898 | INFO     | sum of deviations: 559808522869.4999
[2025-11-26 06:04:51] 2025-11-25 21:03:55,898 | INFO     | mean x: 1764091697.5
[2025-11-26 06:04:51] 2025-11-25 21:03:55,898 | INFO     | mean y: 2635803.8033980583
[2025-11-26 06:04:51] 2025-11-25 21:03:55,898 | INFO     | intersect: -45537377024.8811
[2025-11-26 06:04:51] 2025-11-25 21:03:55,898 | INFO     | chi2: 4.713807703151059
[2025-11-26 06:04:51] 2025-11-25 21:03:55,898 | INFO     | current chi2=4.713807703151059 (change=34.90737700302874 %)
[2025-11-26 06:04:51] 2025-11-25 21:03:55,898 | INFO     | sum of square deviations: 20905426388.0
[2025-11-26 06:04:51] 2025-11-25 21:03:55,899 | INFO     | sum of deviations: 560782149146.0
[2025-11-26 06:04:51] 2025-11-25 21:03:55,899 | INFO     | mean x: 1764091545.0
[2025-11-26 06:04:51] 2025-11-25 21:03:55,899 | INFO     | mean y: 2635974.7542997543
[2025-11-26 06:04:51] 2025-11-25 21:03:55,899 | INFO     | intersect: -47318620694.91318
[2025-11-26 06:04:51] 2025-11-25 21:03:55,899 | INFO     | chi2: 4.624626324111081
[2025-11-26 06:04:51] 2025-11-25 21:03:55,899 | INFO     | current chi2=4.624626324111081 (change=1.8919180555533175 %)
[2025-11-26 06:04:51] 2025-11-25 21:03:55,899 | INFO     | right removable region: 406
[2025-11-26 06:04:51] 2025-11-25 21:03:55,899 | INFO     | sum of square deviations: 21685403803.0
[2025-11-26 06:04:51] 2025-11-25 21:03:55,901 | INFO     | sum of deviations: 322979661092.5
[2025-11-26 06:04:51] 2025-11-25 21:03:55,901 | INFO     | mean x: 1764092002.5
[2025-11-26 06:04:51] 2025-11-25 21:03:55,901 | INFO     | mean y: 2639117.240291262
[2025-11-26 06:04:51] 2025-11-25 21:03:55,901 | INFO     | intersect: -26271524014.765446
[2025-11-26 06:04:51] 2025-11-25 21:03:55,901 | INFO     | chi2: 4.318989326984108
[2025-11-26 06:04:51] 2025-11-25 21:03:55,901 | INFO     | current chi2=4.318989326984108 (change=40.3593948473146 %)
[2025-11-26 06:04:51] 2025-11-25 21:03:55,901 | INFO     | sum of square deviations: 20905426388.0
[2025-11-26 06:04:51] 2025-11-25 21:03:55,902 | INFO     | sum of deviations: 230201711428.0
[2025-11-26 06:04:51] 2025-11-25 21:03:55,902 | INFO     | mean x: 1764092155.0
[2025-11-26 06:04:51] 2025-11-25 21:03:55,902 | INFO     | mean y: 2657225.3341523344
[2025-11-26 06:04:51] 2025-11-25 21:03:55,902 | INFO     | intersect: -19422779293.426064
[2025-11-26 06:04:51] 2025-11-25 21:03:55,902 | INFO     | chi2: 2.752655478441462
[2025-11-26 06:04:51] 2025-11-25 21:03:55,902 | INFO     | current chi2=2.752655478441462 (change=36.26621253163402 %)
[2025-11-26 06:04:51] 2025-11-25 21:03:55,902 | INFO     | sum of square deviations: 20144379560.5
[2025-11-26 06:04:51] 2025-11-25 21:03:55,903 | INFO     | sum of deviations: 210064989258.49994
[2025-11-26 06:04:51] 2025-11-25 21:03:55,903 | INFO     | mean x: 1764092307.5
[2025-11-26 06:04:51] 2025-11-25 21:03:55,903 | INFO     | mean y: 2661256.654228856
[2025-11-26 06:04:51] 2025-11-25 21:03:55,903 | INFO     | intersect: -18393240712.579315
[2025-11-26 06:04:51] 2025-11-25 21:03:55,903 | INFO     | chi2: 2.731678546006625
[2025-11-26 06:04:51] 2025-11-25 21:03:55,904 | INFO     | current chi2=2.731678546006625 (change=0.762061674594818 %)
[2025-11-26 06:04:51] 2025-11-25 21:03:55,904 | INFO     | left removable region: 30
[2025-11-26 06:04:51] 2025-11-25 21:03:55,904 | INFO     | sum of square deviations: 16483099750.0
[2025-11-26 06:04:51] 2025-11-25 21:03:55,905 | INFO     | sum of deviations: 270946934342.0
[2025-11-26 06:04:51] 2025-11-25 21:03:55,905 | INFO     | mean x: 1764092429.5
[2025-11-26 06:04:51] 2025-11-25 21:03:55,905 | INFO     | mean y: 2695071.436170213
[2025-11-26 06:04:51] 2025-11-25 21:03:55,905 | INFO     | intersect: -28995214479.46343
[2025-11-26 06:04:51] 2025-11-25 21:03:55,905 | INFO     | chi2: 0.046289803559697695
[2025-11-26 06:04:51] 2025-11-25 21:03:55,905 | INFO     | current memory leak: 16.44 B/s (using 376 data points, chi2=0.05)
[2025-11-26 06:04:51] 2025-11-25 21:03:55,905 | INFO     | could have reported an average CPU frequency of 3438 MHz (17 samples)
[2025-11-26 06:04:51] 2025-11-25 21:03:55,905 | INFO     | ..............................
[2025-11-26 06:04:51] 2025-11-25 21:03:55,905 | INFO     | . Timing measurements:
[2025-11-26 06:04:51] 2025-11-25 21:03:55,905 | INFO     | . get job = 0 s
[2025-11-26 06:04:51] 2025-11-25 21:03:55,905 | INFO     | . initial setup = 4 s
[2025-11-26 06:04:51] 2025-11-25 21:03:55,905 | INFO     | . payload setup = 2 s
[2025-11-26 06:04:51] 2025-11-25 21:03:55,905 | INFO     | . stage-in = 0 s
[2025-11-26 06:04:51] 2025-11-25 21:03:55,905 | INFO     | . payload execution = 25403 s
[2025-11-26 06:04:51] 2025-11-25 21:03:55,905 | INFO     | . stage-out = 4 s
[2025-11-26 06:04:51] 2025-11-25 21:03:55,905 | INFO     | . log creation = 0 s
[2025-11-26 06:04:51] 2025-11-25 21:03:55,905 | INFO     | ..............................
[2025-11-26 06:04:51] 2025-11-25 21:03:55,927 | INFO     | 
[2025-11-26 06:04:51] 2025-11-25 21:03:55,927 | INFO     | job summary report
[2025-11-26 06:04:51] 2025-11-25 21:03:55,927 | INFO     | --------------------------------------------------
[2025-11-26 06:04:51] 2025-11-25 21:03:55,927 | INFO     | PanDA job id: 6895353411
[2025-11-26 06:04:51] 2025-11-25 21:03:55,927 | INFO     | task id: 47556137
[2025-11-26 06:04:51] 2025-11-25 21:03:55,927 | INFO     | errors: (none)
[2025-11-26 06:04:51] 2025-11-25 21:03:55,927 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 06:04:51] 2025-11-25 21:03:55,927 | INFO     | pilot state: finished 
[2025-11-26 06:04:51] 2025-11-25 21:03:55,927 | INFO     | transexitcode: 0
[2025-11-26 06:04:51] 2025-11-25 21:03:55,927 | INFO     | exeerrorcode: 0
[2025-11-26 06:04:51] 2025-11-25 21:03:55,927 | INFO     | exeerrordiag: 
[2025-11-26 06:04:51] 2025-11-25 21:03:55,927 | INFO     | exitcode: 0
[2025-11-26 06:04:51] 2025-11-25 21:03:55,927 | INFO     | exitmsg: OK
[2025-11-26 06:04:51] 2025-11-25 21:03:55,927 | INFO     | cpuconsumptiontime: 145146 s
[2025-11-26 06:04:51] 2025-11-25 21:03:55,927 | INFO     | nevents: 1000
[2025-11-26 06:04:51] 2025-11-25 21:03:55,927 | INFO     | neventsw: 0
[2025-11-26 06:04:51] 2025-11-25 21:03:55,927 | INFO     | pid: 3099750
[2025-11-26 06:04:51] 2025-11-25 21:03:55,927 | INFO     | pgrp: 3099750
[2025-11-26 06:04:51] 2025-11-25 21:03:55,927 | INFO     | corecount: 6
[2025-11-26 06:04:51] 2025-11-25 21:03:55,927 | INFO     | event service: False
[2025-11-26 06:04:51] 2025-11-25 21:03:55,927 | INFO     | sizes: {0: 2284315, 2: 2284577, 11: 2284605, 25409: 2321025, 25414: 2330019, 25417: 2330075, 25479: 2330513}
[2025-11-26 06:04:51] 2025-11-25 21:03:55,927 | INFO     | --------------------------------------------------
[2025-11-26 06:04:51] 2025-11-25 21:03:55,927 | INFO     | 
[2025-11-26 06:04:51] 2025-11-25 21:03:55,927 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-11-26 06:04:51] 2025-11-25 21:03:55,935 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 06:04:51] 2025-11-25 21:03:55,935 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 06:04:51] 2025-11-25 21:03:55,935 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 06:04:51] 2025-11-25 21:03:55,935 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 06:04:51] 2025-11-25 21:03:55,935 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 06:04:51] 2025-11-25 21:03:55,935 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 06:04:51] 2025-11-25 21:03:55,935 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 06:04:51] 2025-11-25 21:03:55,935 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 06:04:51] 2025-11-25 21:03:55,935 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 06:04:51] 2025-11-25 21:03:55,935 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 06:04:51] 2025-11-25 21:03:55,935 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 06:04:51] 2025-11-25 21:03:55,935 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 06:04:51] 2025-11-25 21:03:55,935 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 06:04:51] 2025-11-25 21:03:55,935 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 06:04:51] 2025-11-25 21:03:55,935 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 06:04:51] 2025-11-25 21:03:55,935 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 06:04:51] 2025-11-25 21:03:55,935 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 06:04:51] 2025-11-25 21:03:55,935 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 06:04:51] 2025-11-25 21:03:55,935 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 06:04:51] 2025-11-25 21:03:55,935 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 06:04:51] 2025-11-25 21:03:55,935 | INFO     | job 6895353411 has completed (purged errors)
[2025-11-26 06:04:51] 2025-11-25 21:03:55,935 | INFO     | overall cleanup function is called
[2025-11-26 06:04:51] 2025-11-25 21:03:56,944 | INFO     | --- collectZombieJob: --- 10, [3099750]
[2025-11-26 06:04:51] 2025-11-25 21:03:56,944 | INFO     | zombie collector waiting for pid 3099750
[2025-11-26 06:04:51] 2025-11-25 21:03:56,944 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 06:04:51] 2025-11-25 21:03:56,944 | INFO     | collected zombie processes
[2025-11-26 06:04:51] 2025-11-25 21:03:56,944 | INFO     | will attempt to kill all subprocesses of pid=3099750
[2025-11-26 06:04:51] 2025-11-25 21:03:56,966 | INFO     | process IDs to be killed: [3099750] (in reverse order)
[2025-11-26 06:04:51] 2025-11-25 21:03:56,978 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 06:04:51] 2025-11-25 21:03:56,979 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 06:04:51] 2025-11-25 21:03:56,979 | INFO     | did not find any defunct processes belonging to 3099750
[2025-11-26 06:04:51] 2025-11-25 21:03:56,980 | INFO     | did not find any defunct processes belonging to 3099750
[2025-11-26 06:04:51] 2025-11-25 21:03:56,980 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 06:04:51] 2025-11-25 21:03:56,981 | INFO     | ready for new job
[2025-11-26 06:04:51] 2025-11-25 21:03:56,981 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 06:04:51] 2025-11-25 21:03:56,981 | INFO     | ***************************************
[2025-11-26 06:04:51] 2025-11-25 21:03:56,981 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 06:04:51] 2025-11-25 21:03:56,981 | INFO     | ***************************************
[2025-11-26 06:04:51] 2025-11-25 21:03:56,981 | INFO     | 
[2025-11-26 06:04:51] 2025-11-25 21:03:56,981 | INFO     | architecture information:
[2025-11-26 06:04:51] 2025-11-25 21:03:56,982 | INFO     | executing command: cat /etc/os-release
[2025-11-26 06:04:51] 2025-11-25 21:03:56,986 | INFO     | cat /etc/os-release:
[2025-11-26 06:04:51] NAME="CentOS Linux"
[2025-11-26 06:04:51] VERSION="7 (Core)"
[2025-11-26 06:04:51] ID="centos"
[2025-11-26 06:04:51] ID_LIKE="rhel fedora"
[2025-11-26 06:04:51] VERSION_ID="7"
[2025-11-26 06:04:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 06:04:51] ANSI_COLOR="0;31"
[2025-11-26 06:04:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 06:04:51] HOME_URL="https://www.centos.org/"
[2025-11-26 06:04:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 06:04:51] 
[2025-11-26 06:04:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 06:04:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 06:04:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 06:04:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 06:04:51] 
[2025-11-26 06:04:51] 2025-11-25 21:03:56,986 | INFO     | ***************************************
[2025-11-26 06:04:51] 2025-11-25 21:03:57,488 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-11-26 06:04:51] 2025-11-25 21:03:57,494 | INFO     | sufficient remaining disk space (288186433536 B)
[2025-11-26 06:04:51] 2025-11-25 21:03:57,494 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 06:04:51] 2025-11-25 21:03:57,494 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 06:04:51] 2025-11-25 21:03:57,494 | INFO     | update_server=False
[2025-11-26 06:04:51] 2025-11-25 21:03:57,494 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 06:04:51] 2025-11-25 21:03:57,494 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:04:51] 2025-11-25 21:03:57,499 | INFO     | all data control threads have been joined
[2025-11-26 06:04:51] 2025-11-25 21:03:57,992 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 06:04:51] 2025-11-25 21:03:58,083 | INFO     | all payload control threads have been joined
[2025-11-26 06:04:51] 2025-11-25 21:03:58,144 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:04:51] 2025-11-25 21:03:58,144 | INFO     | aborting loop
[2025-11-26 06:04:51] 2025-11-25 21:03:58,499 | INFO     | [data] control thread has finished
[2025-11-26 06:04:51] 2025-11-25 21:03:58,499 | INFO     | [job] retrieve thread has finished
[2025-11-26 06:04:51] 2025-11-25 21:03:58,499 | INFO     | [job] queue monitor thread has finished
[2025-11-26 06:04:51] 2025-11-25 21:03:58,629 | INFO     | [data] copytool_in thread has finished
[2025-11-26 06:04:51] 2025-11-25 21:03:58,712 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 06:04:51] 2025-11-25 21:03:58,768 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 06:04:51] 2025-11-25 21:03:58,778 | INFO     | all job control threads have been joined
[2025-11-26 06:04:51] 2025-11-25 21:03:58,806 | INFO     | [payload] validate_post thread has finished
[2025-11-26 06:04:51] 2025-11-25 21:03:58,898 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 06:04:51] 2025-11-25 21:03:59,025 | INFO     | [job] validate thread has finished
[2025-11-26 06:04:51] 2025-11-25 21:03:59,088 | INFO     | [payload] control thread has finished
[2025-11-26 06:04:51] 2025-11-25 21:03:59,119 | INFO     | [payload] failed_post thread has finished
[2025-11-26 06:04:51] 2025-11-25 21:03:59,149 | INFO     | [job] job monitor thread has finished
[2025-11-26 06:04:51] 2025-11-25 21:03:59,161 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 06:04:51] 2025-11-25 21:03:59,783 | INFO     | [job] control thread has finished
[2025-11-26 06:04:51] 2025-11-25 21:03:59,858 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 06:04:51] 2025-11-25 21:04:00,717 | INFO     | [data] copytool_out thread has finished
[2025-11-26 06:04:51] 2025-11-25 21:04:01,994 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 06:04:51] 2025-11-25 21:04:28,135 | INFO     | PID=3093005 has CPU usage=0.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 06:04:51] 2025-11-25 21:04:28,135 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 06:04:51] 2025-11-25 21:04:28,135 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 06:04:51] 2025-11-25 21:04:28,135 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 06:04:51] 2025-11-25 21:04:46,616 | INFO     | [monitor] cgroup control has ended
[2025-11-26 06:04:51] 2025-11-25 21:04:46,766 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139939718825792)>', '<ExcThread(monitor, started 139939060627200)>']
[2025-11-26 06:04:51] 2025-11-25 21:04:47,223 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 06:04:51] 2025-11-25 21:04:47,223 | INFO     | [monitor] control thread has ended
[2025-11-26 06:04:51] 2025-11-25 21:04:51,791 | INFO     | all workflow threads have been joined
[2025-11-26 06:04:51] 2025-11-25 21:04:51,791 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 06:04:51] 2025-11-25 21:04:51,791 | INFO     | traces error code: 0
[2025-11-26 06:04:51] 2025-11-25 21:04:51,791 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 06:04:51] 2025-11-25 21:04:51,833 [wrapper] ==== pilot stdout END ====
[2025-11-26 06:04:51] 2025-11-25 21:04:51,834 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 06:04:51] 2025-11-25 21:04:51,835 [wrapper] pilotpid: 3093005
[2025-11-26 06:04:51] 2025-11-25 21:04:51,835 [wrapper] Pilot exit status: 0
[2025-11-26 06:04:51] 2025-11-25 21:04:51,838 [wrapper] pandaids: 6895353411
[2025-11-26 06:04:51] 2025-11-25 21:04:51,846 [wrapper] cleanup supervisor_pilot 3221363 3093006
[2025-11-26 06:04:51] 2025-11-25 21:04:51,847 [wrapper] Test setup, not cleaning
[2025-11-26 06:04:51] 2025-11-25 21:04:51,848 [wrapper] apfmon messages muted
[2025-11-26 06:04:51] 2025-11-25 21:04:51,849 [wrapper] ==== wrapper stdout END ====
[2025-11-26 06:04:51] 2025-11-25 21:04:51,849 [wrapper] ==== wrapper stderr END ====
[2025-11-26 06:04:51]  *** Error codes and diagnostics ***
[2025-11-26 06:04:51]     "exeErrorCode": 0,
[2025-11-26 06:04:51]     "exeErrorDiag": "",
[2025-11-26 06:04:51]     "pilotErrorCode": 0,
[2025-11-26 06:04:51]     "pilotErrorDiag": "",
[2025-11-26 06:04:51]  *** Listing of results directory ***
[2025-11-26 06:04:51] total 1296648
[2025-11-26 06:04:51] -rw-r--r--. 1 boinc boinc    576529 Nov 23 13:55 pilot3.tar.gz
[2025-11-26 06:04:51] -rw-r--r--. 1 boinc boinc      5112 Nov 23 14:07 queuedata.json
[2025-11-26 06:04:51] -rwx------. 1 boinc boinc     36292 Nov 23 14:08 runpilot2-wrapper.sh
[2025-11-26 06:04:51] -rw-r--r--. 1 boinc boinc       100 Nov 25 22:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 06:04:51] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 22:58 run_atlas
[2025-11-26 06:04:51] -rw-r--r--. 1 boinc boinc       105 Nov 25 22:58 job.xml
[2025-11-26 06:04:51] -rw-r--r--. 2 boinc boinc     15847 Nov 25 22:58 start_atlas.sh
[2025-11-26 06:04:51] drwxrwx--x. 2 boinc boinc        68 Nov 25 22:58 shared
[2025-11-26 06:04:51] -rw-r--r--. 2 boinc boinc    590098 Nov 25 22:58 input.tar.gz
[2025-11-26 06:04:51] -rw-r--r--. 1 boinc boinc      9515 Nov 25 22:58 init_data.xml
[2025-11-26 06:04:51] -rw-r--r--. 2 boinc boinc 409452795 Nov 25 22:58 EVNT.47483658._000621.pool.root.1
[2025-11-26 06:04:51] -rw-r--r--. 1 boinc boinc         0 Nov 25 22:58 boinc_lockfile
[2025-11-26 06:04:51] -rw-r--r--. 1 boinc boinc      2786 Nov 25 22:58 pandaJob.out
[2025-11-26 06:04:51] -rw-------. 1 boinc boinc    991909 Nov 25 22:59 agis_schedconf.cvmfs.json
[2025-11-26 06:04:51] drwx------. 5 boinc boinc      4096 Nov 25 22:59 pilot3
[2025-11-26 06:04:51] -rw-r--r--. 1 boinc boinc       533 Nov 26 05:56 boinc_task_state.xml
[2025-11-26 06:04:51] -rw-------. 1 boinc boinc 904265378 Nov 26 06:02 HITS.47556137._006162.pool.root.1
[2025-11-26 06:04:51] -rw-------. 1 boinc boinc      1030 Nov 26 06:02 memory_monitor_summary.json
[2025-11-26 06:04:51] -rw-------. 1 boinc boinc   1516240 Nov 26 06:02 agis_ddmendpoints.agis.ALL.json
[2025-11-26 06:04:51] -rw-------. 1 boinc boinc   1475966 Nov 26 06:02 log.47556137._006162.job.log.tgz.1
[2025-11-26 06:04:51] -rw-------. 1 boinc boinc      8599 Nov 26 06:03 heartbeat.json
[2025-11-26 06:04:51] -rw-r--r--. 1 boinc boinc      8192 Nov 26 06:04 boinc_mmap_file
[2025-11-26 06:04:51] -rw-------. 1 boinc boinc        95 Nov 26 06:04 pilot_heartbeat.json
[2025-11-26 06:04:51] -rw-r--r--. 1 boinc boinc        29 Nov 26 06:04 wrapper_checkpoint.txt
[2025-11-26 06:04:51] -rw-------. 1 boinc boinc      4749 Nov 26 06:04 pilotlog.txt
[2025-11-26 06:04:51] -rw-------. 1 boinc boinc   3595947 Nov 26 06:04 log.47556137._006162.job.log.1
[2025-11-26 06:04:51] -rw-------. 1 boinc boinc       353 Nov 26 06:04 output.list
[2025-11-26 06:04:51] -rw-r--r--. 1 boinc boinc       620 Nov 26 06:04 runtime_log
[2025-11-26 06:04:51] -rw-------. 1 boinc boinc   5089280 Nov 26 06:04 result.tar.gz
[2025-11-26 06:04:51] -rw-r--r--. 1 boinc boinc      8776 Nov 26 06:04 runtime_log.err
[2025-11-26 06:04:51] -rw-------. 1 boinc boinc       650 Nov 26 06:04 gSlLDmJWHh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpcKKDmaHJ3Jo.diag
[2025-11-26 06:04:51] -rw-r--r--. 1 boinc boinc     20698 Nov 26 06:04 stderr.txt
[2025-11-26 06:04:51] HITS file was successfully produced:
[2025-11-26 06:04:51] -rw-------. 1 boinc boinc 904265378 Nov 26 06:02 shared/HITS.pool.root.1
[2025-11-26 06:04:51]  *** Contents of shared directory: ***
[2025-11-26 06:04:51] total 1288500
[2025-11-26 06:04:51] -rw-r--r--. 2 boinc boinc     15847 Nov 25 22:58 start_atlas.sh
[2025-11-26 06:04:51] -rw-r--r--. 2 boinc boinc    590098 Nov 25 22:58 input.tar.gz
[2025-11-26 06:04:51] -rw-r--r--. 2 boinc boinc 409452795 Nov 25 22:58 ATLAS.root_0
[2025-11-26 06:04:51] -rw-------. 1 boinc boinc 904265378 Nov 26 06:02 HITS.pool.root.1
[2025-11-26 06:04:51] -rw-------. 1 boinc boinc   5089280 Nov 26 06:04 result.tar.gz
06:04:52 (3089199): run_atlas exited; CPU time 145212.108005
06:04:52 (3089199): called boinc_finish(0)

</stderr_txt>
]]>

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