Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:39:35 (825112): wrapper (7.7.26015): starting
19:39:35 (825112): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 19:39:35] Arguments: --nthreads 8
[2025-11-23 19:39:35] Threads: 8
[2025-11-23 19:39:35] Checking for CVMFS
[2025-11-23 19:39:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 19:39:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 19:39:36] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 19:39:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 19:39:37] 2.13.2.0 3557600 19259 145616 153227 0 427 31463319 40960000 33424 16776704 0 189617158 99.719 141242092 49089 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 19:39:37] CVMFS is ok
[2025-11-23 19:39:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 19:39:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 19:39:37] Further information can be found at the LHC@home message board.
[2025-11-23 19:39:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 19:39:37] Checking for apptainer binary...
[2025-11-23 19:39:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 19:39:37] Running /usr/bin/apptainer --version
[2025-11-23 19:39:37] apptainer version 1.4.4-1.el9
[2025-11-23 19:39:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 19:39:38] c-208-40.aglt2.org
[2025-11-23 19:39:38] apptainer works
[2025-11-23 19:39:38] Set ATHENA_PROC_NUMBER=8
[2025-11-23 19:39:38] Set ATHENA_CORE_NUMBER=8
[2025-11-23 19:39:38] Starting ATLAS job with PandaID=6895346086
[2025-11-23 19:39:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 10:55:04]  *** The last 200 lines of the pilot log: ***
[2025-11-24 10:55:04] 2025-11-24 15:53:46,468 | INFO     | time since job start (54748s) is within the limit (172800.0s)
[2025-11-24 10:55:04] 2025-11-24 15:53:47,931 | INFO     | monitor loop #3102: job 0:6895346086 is in state 'finished'
[2025-11-24 10:55:04] 2025-11-24 15:53:47,933 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 10:55:04] 2025-11-24 15:53:48,515 | INFO     | time since job start (54750s) is within the limit (172800.0s)
[2025-11-24 10:55:04] 2025-11-24 15:53:50,438 | INFO     | monitor loop #3103: job 0:6895346086 is in state 'finished'
[2025-11-24 10:55:04] 2025-11-24 15:53:50,438 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 10:55:04] 2025-11-24 15:53:50,524 | INFO     | time since job start (54752s) is within the limit (172800.0s)
[2025-11-24 10:55:04] 2025-11-24 15:53:52,534 | INFO     | time since job start (54754s) is within the limit (172800.0s)
[2025-11-24 10:55:04] 2025-11-24 15:53:52,957 | INFO     | monitor loop #3104: job 0:6895346086 is in state 'finished'
[2025-11-24 10:55:04] 2025-11-24 15:53:52,957 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 10:55:04] 2025-11-24 15:53:54,559 | INFO     | time since job start (54756s) is within the limit (172800.0s)
[2025-11-24 10:55:04] 2025-11-24 15:53:55,469 | INFO     | monitor loop #3105: job 0:6895346086 is in state 'finished'
[2025-11-24 10:55:04] 2025-11-24 15:53:55,469 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 10:55:04] 2025-11-24 15:53:56,573 | INFO     | time since job start (54758s) is within the limit (172800.0s)
[2025-11-24 10:55:04] 2025-11-24 15:53:57,974 | INFO     | monitor loop #3106: job 0:6895346086 is in state 'finished'
[2025-11-24 10:55:04] 2025-11-24 15:53:57,974 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 10:55:04] 2025-11-24 15:53:58,580 | INFO     | time since job start (54760s) is within the limit (172800.0s)
[2025-11-24 10:55:04] 2025-11-24 15:53:59,412 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-24 10:55:04] 2025-11-24 15:53:59,431 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3791.4860781250013
[2025-11-24 10:55:04] 2025-11-24 15:53:59,488 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895346086/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 10:55:04] 2025-11-24 15:53:59,488 | INFO     | extracted standard info from prmon json
[2025-11-24 10:55:04] 2025-11-24 15:53:59,488 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 10:55:04] 2025-11-24 15:53:59,488 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 10:55:04] 2025-11-24 15:53:59,524 | INFO     | fitting pss+swap vs Time
[2025-11-24 10:55:04] 2025-11-24 15:53:59,539 | INFO     | sum of square deviations: 222315842259.4794
[2025-11-24 10:55:04] 2025-11-24 15:53:59,587 | INFO     | sum of deviations: 11408242261408.748
[2025-11-24 10:55:04] 2025-11-24 15:53:59,587 | INFO     | mean x: 1763972322.2726257
[2025-11-24 10:55:04] 2025-11-24 15:53:59,588 | INFO     | mean y: 3644416.505027933
[2025-11-24 10:55:04] 2025-11-24 15:53:59,588 | INFO     | intersect: -90515426965.81267
[2025-11-24 10:55:04] 2025-11-24 15:53:59,588 | INFO     | chi2: 45.960171161716424
[2025-11-24 10:55:04] 2025-11-24 15:53:59,589 | INFO     | sum of square deviations: 218611745153.12778
[2025-11-24 10:55:04] 2025-11-24 15:53:59,621 | INFO     | sum of deviations: 11820909657800.785
[2025-11-24 10:55:04] 2025-11-24 15:53:59,621 | INFO     | mean x: 1763972169.7910113
[2025-11-24 10:55:04] 2025-11-24 15:53:59,621 | INFO     | mean y: 3661399.3483146066
[2025-11-24 10:55:04] 2025-11-24 15:53:59,621 | INFO     | intersect: -95378934093.7193
[2025-11-24 10:55:04] 2025-11-24 15:53:59,622 | INFO     | chi2: 41.24127002983346
[2025-11-24 10:55:04] 2025-11-24 15:53:59,622 | INFO     | current chi2=41.24127002983346 (change=10.267370665959753 %)
[2025-11-24 10:55:04] 2025-11-24 15:53:59,622 | INFO     | right removable region: 889
[2025-11-24 10:55:04] 2025-11-24 15:53:59,623 | INFO     | sum of square deviations: 218609958463.128
[2025-11-24 10:55:04] 2025-11-24 15:53:59,631 | INFO     | sum of deviations: 10916426036042.107
[2025-11-24 10:55:04] 2025-11-24 15:53:59,632 | INFO     | mean x: 1763972474.7910113
[2025-11-24 10:55:04] 2025-11-24 15:53:59,632 | INFO     | mean y: 3664656.9898876403
[2025-11-24 10:55:04] 2025-11-24 15:53:59,632 | INFO     | intersect: -88081412464.13358
[2025-11-24 10:55:04] 2025-11-24 15:53:59,632 | INFO     | chi2: 41.17661772456981
[2025-11-24 10:55:04] 2025-11-24 15:53:59,632 | INFO     | current chi2=41.17661772456981 (change=10.408040954232098 %)
[2025-11-24 10:55:04] 2025-11-24 15:53:59,632 | INFO     | left removable region: 10
[2025-11-24 10:55:04] 2025-11-24 15:53:59,633 | INFO     | sum of square deviations: 210604545048.99866
[2025-11-24 10:55:04] 2025-11-24 15:53:59,641 | INFO     | sum of deviations: 10956548892969.742
[2025-11-24 10:55:04] 2025-11-24 15:53:59,641 | INFO     | mean x: 1763972444.3321958
[2025-11-24 10:55:04] 2025-11-24 15:53:59,641 | INFO     | mean y: 3703917.0728100115
[2025-11-24 10:55:04] 2025-11-24 15:53:59,641 | INFO     | intersect: -91765684667.0172
[2025-11-24 10:55:04] 2025-11-24 15:53:59,642 | INFO     | chi2: 32.012663782719265
[2025-11-24 10:55:04] 2025-11-24 15:53:59,642 | INFO     | current memory leak: 52.02 B/s (using 879 data points, chi2=32.01)
[2025-11-24 10:55:04] 2025-11-24 15:53:59,643 | INFO     | could have reported an average CPU frequency of 3796 MHz (33 samples)
[2025-11-24 10:55:04] 2025-11-24 15:53:59,643 | INFO     | ..............................
[2025-11-24 10:55:04] 2025-11-24 15:53:59,643 | INFO     | . Timing measurements:
[2025-11-24 10:55:04] 2025-11-24 15:53:59,643 | INFO     | . get job = 0 s
[2025-11-24 10:55:04] 2025-11-24 15:53:59,643 | INFO     | . initial setup = 11 s
[2025-11-24 10:55:04] 2025-11-24 15:53:59,643 | INFO     | . payload setup = 65 s
[2025-11-24 10:55:04] 2025-11-24 15:53:59,643 | INFO     | . stage-in = 0 s
[2025-11-24 10:55:04] 2025-11-24 15:53:59,643 | INFO     | . payload execution = 54568 s
[2025-11-24 10:55:04] 2025-11-24 15:53:59,643 | INFO     | . stage-out = 8 s
[2025-11-24 10:55:04] 2025-11-24 15:53:59,643 | INFO     | . log creation = 2 s
[2025-11-24 10:55:04] 2025-11-24 15:53:59,643 | INFO     | ..............................
[2025-11-24 10:55:04] 2025-11-24 15:53:59,733 | INFO     | 
[2025-11-24 10:55:04] 2025-11-24 15:53:59,733 | INFO     | job summary report
[2025-11-24 10:55:04] 2025-11-24 15:53:59,733 | INFO     | --------------------------------------------------
[2025-11-24 10:55:04] 2025-11-24 15:53:59,733 | INFO     | PanDA job id: 6895346086
[2025-11-24 10:55:04] 2025-11-24 15:53:59,733 | INFO     | task id: 47556137
[2025-11-24 10:55:04] 2025-11-24 15:53:59,733 | INFO     | errors: (none)
[2025-11-24 10:55:04] 2025-11-24 15:53:59,733 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 10:55:04] 2025-11-24 15:53:59,733 | INFO     | pilot state: finished 
[2025-11-24 10:55:04] 2025-11-24 15:53:59,733 | INFO     | transexitcode: 0
[2025-11-24 10:55:04] 2025-11-24 15:53:59,733 | INFO     | exeerrorcode: 0
[2025-11-24 10:55:04] 2025-11-24 15:53:59,733 | INFO     | exeerrordiag: 
[2025-11-24 10:55:04] 2025-11-24 15:53:59,733 | INFO     | exitcode: 0
[2025-11-24 10:55:04] 2025-11-24 15:53:59,733 | INFO     | exitmsg: OK
[2025-11-24 10:55:04] 2025-11-24 15:53:59,733 | INFO     | cpuconsumptiontime: 142542 s
[2025-11-24 10:55:04] 2025-11-24 15:53:59,733 | INFO     | nevents: 1000
[2025-11-24 10:55:04] 2025-11-24 15:53:59,733 | INFO     | neventsw: 0
[2025-11-24 10:55:04] 2025-11-24 15:53:59,733 | INFO     | pid: 848167
[2025-11-24 10:55:04] 2025-11-24 15:53:59,734 | INFO     | pgrp: 848167
[2025-11-24 10:55:04] 2025-11-24 15:53:59,734 | INFO     | corecount: 8
[2025-11-24 10:55:04] 2025-11-24 15:53:59,734 | INFO     | event service: False
[2025-11-24 10:55:04] 2025-11-24 15:53:59,734 | INFO     | sizes: {0: 2298584, 1: 2298783, 12: 2298783, 23: 2298811, 34: 2298839, 35: 2299129, 44: 2299285, 54638: 2348691, 54648: 2358476, 54649: 2358532, 54687: 2358842}
[2025-11-24 10:55:04] 2025-11-24 15:53:59,734 | INFO     | --------------------------------------------------
[2025-11-24 10:55:04] 2025-11-24 15:53:59,734 | INFO     | 
[2025-11-24 10:55:04] 2025-11-24 15:53:59,734 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-24 10:55:04] 2025-11-24 15:53:59,867 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 10:55:04] 2025-11-24 15:53:59,867 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 10:55:04] 2025-11-24 15:53:59,867 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 10:55:04] 2025-11-24 15:53:59,868 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 10:55:04] 2025-11-24 15:53:59,868 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 10:55:04] 2025-11-24 15:53:59,868 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 10:55:04] 2025-11-24 15:53:59,868 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 10:55:04] 2025-11-24 15:53:59,868 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 10:55:04] 2025-11-24 15:53:59,868 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 10:55:04] 2025-11-24 15:53:59,868 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 10:55:04] 2025-11-24 15:53:59,868 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 10:55:04] 2025-11-24 15:53:59,868 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 10:55:04] 2025-11-24 15:53:59,868 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 10:55:04] 2025-11-24 15:53:59,868 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 10:55:04] 2025-11-24 15:53:59,868 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 10:55:04] 2025-11-24 15:53:59,868 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 10:55:04] 2025-11-24 15:53:59,868 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 10:55:04] 2025-11-24 15:53:59,868 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 10:55:04] 2025-11-24 15:53:59,868 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 10:55:04] 2025-11-24 15:53:59,868 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 10:55:04] 2025-11-24 15:53:59,868 | INFO     | job 6895346086 has completed (purged errors)
[2025-11-24 10:55:04] 2025-11-24 15:53:59,868 | INFO     | overall cleanup function is called
[2025-11-24 10:55:04] 2025-11-24 15:54:00,915 | INFO     | --- collectZombieJob: --- 10, [848167]
[2025-11-24 10:55:04] 2025-11-24 15:54:00,915 | INFO     | zombie collector waiting for pid 848167
[2025-11-24 10:55:04] 2025-11-24 15:54:00,915 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 10:55:04] 2025-11-24 15:54:00,915 | INFO     | collected zombie processes
[2025-11-24 10:55:04] 2025-11-24 15:54:00,915 | INFO     | will attempt to kill all subprocesses of pid=848167
[2025-11-24 10:55:04] 2025-11-24 15:54:02,837 | INFO     | process IDs to be killed: [848167] (in reverse order)
[2025-11-24 10:55:04] 2025-11-24 15:54:03,305 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 10:55:04] 2025-11-24 15:54:03,306 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 10:55:04] 2025-11-24 15:54:03,362 | INFO     | did not find any defunct processes belonging to 848167
[2025-11-24 10:55:04] 2025-11-24 15:54:03,418 | INFO     | did not find any defunct processes belonging to 848167
[2025-11-24 10:55:04] 2025-11-24 15:54:03,424 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 10:55:04] 2025-11-24 15:54:03,424 | INFO     | ready for new job
[2025-11-24 10:55:04] 2025-11-24 15:54:03,424 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 10:55:04] 2025-11-24 15:54:03,426 | INFO     | ***************************************
[2025-11-24 10:55:04] 2025-11-24 15:54:03,426 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 10:55:04] 2025-11-24 15:54:03,426 | INFO     | ***************************************
[2025-11-24 10:55:04] 2025-11-24 15:54:03,426 | INFO     | 
[2025-11-24 10:55:04] 2025-11-24 15:54:03,449 | INFO     | architecture information:
[2025-11-24 10:55:04] 2025-11-24 15:54:03,461 | INFO     | executing command: cat /etc/os-release
[2025-11-24 10:55:04] 2025-11-24 15:54:03,532 | INFO     | cat /etc/os-release:
[2025-11-24 10:55:04] NAME="CentOS Linux"
[2025-11-24 10:55:04] VERSION="7 (Core)"
[2025-11-24 10:55:04] ID="centos"
[2025-11-24 10:55:04] ID_LIKE="rhel fedora"
[2025-11-24 10:55:04] VERSION_ID="7"
[2025-11-24 10:55:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 10:55:04] ANSI_COLOR="0;31"
[2025-11-24 10:55:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 10:55:04] HOME_URL="https://www.centos.org/"
[2025-11-24 10:55:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 10:55:04] 
[2025-11-24 10:55:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 10:55:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 10:55:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 10:55:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 10:55:04] 
[2025-11-24 10:55:04] 2025-11-24 15:54:03,532 | INFO     | ***************************************
[2025-11-24 10:55:04] 2025-11-24 15:54:04,036 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-24 10:55:04] 2025-11-24 15:54:04,085 | INFO     | sufficient remaining disk space (159213682688 B)
[2025-11-24 10:55:04] 2025-11-24 15:54:04,085 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 10:55:04] 2025-11-24 15:54:04,085 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 10:55:04] 2025-11-24 15:54:04,085 | INFO     | update_server=False
[2025-11-24 10:55:04] 2025-11-24 15:54:04,085 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 10:55:04] 2025-11-24 15:54:04,086 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 10:55:04] 2025-11-24 15:54:04,086 | INFO     | aborting loop
[2025-11-24 10:55:04] 2025-11-24 15:54:04,236 | INFO     | all payload control threads have been joined
[2025-11-24 10:55:04] 2025-11-24 15:54:04,322 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 10:55:04] 2025-11-24 15:54:04,341 | INFO     | all job control threads have been joined
[2025-11-24 10:55:04] 2025-11-24 15:54:04,402 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 10:55:04] 2025-11-24 15:54:04,758 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 10:55:04] 2025-11-24 15:54:05,002 | INFO     | all data control threads have been joined
[2025-11-24 10:55:04] 2025-11-24 15:54:05,091 | INFO     | [job] retrieve thread has finished
[2025-11-24 10:55:04] 2025-11-24 15:54:05,092 | INFO     | [job] job monitor thread has finished
[2025-11-24 10:55:04] 2025-11-24 15:54:05,124 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 10:55:04] 2025-11-24 15:54:05,230 | INFO     | [payload] validate_post thread has finished
[2025-11-24 10:55:04] 2025-11-24 15:54:05,242 | INFO     | [payload] control thread has finished
[2025-11-24 10:55:04] 2025-11-24 15:54:05,366 | INFO     | [job] control thread has finished
[2025-11-24 10:55:04] 2025-11-24 15:54:05,414 | INFO     | [job] validate thread has finished
[2025-11-24 10:55:04] 2025-11-24 15:54:05,764 | INFO     | [job] queue monitor thread has finished
[2025-11-24 10:55:04] 2025-11-24 15:54:05,778 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 10:55:04] 2025-11-24 15:54:05,791 | INFO     | [data] copytool_in thread has finished
[2025-11-24 10:55:04] 2025-11-24 15:54:05,921 | INFO     | [payload] failed_post thread has finished
[2025-11-24 10:55:04] 2025-11-24 15:54:05,956 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 10:55:04] 2025-11-24 15:54:06,017 | INFO     | [data] control thread has finished
[2025-11-24 10:55:04] 2025-11-24 15:54:06,324 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 10:55:04] 2025-11-24 15:54:06,409 | INFO     | [data] copytool_out thread has finished
[2025-11-24 10:55:04] 2025-11-24 15:54:08,332 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 10:55:04] 2025-11-24 15:54:32,807 | INFO     | PID=835465 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-24 10:55:04] 2025-11-24 15:54:32,807 | INFO     | .. there are 45 such processes running
[2025-11-24 10:55:04] 2025-11-24 15:54:32,808 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 10:55:04] 2025-11-24 15:54:32,808 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 10:55:04] 2025-11-24 15:54:32,808 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 10:55:04] 2025-11-24 15:54:56,638 | INFO     | [monitor] cgroup control has ended
[2025-11-24 10:55:04] 2025-11-24 15:54:57,623 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140295001474880)>', '<ExcThread(monitor, started 140294360131328)>']
[2025-11-24 10:55:04] 2025-11-24 15:54:58,007 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 10:55:04] 2025-11-24 15:54:58,007 | INFO     | [monitor] control thread has ended
[2025-11-24 10:55:04] 2025-11-24 15:55:02,651 | INFO     | all workflow threads have been joined
[2025-11-24 10:55:04] 2025-11-24 15:55:02,651 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 10:55:04] 2025-11-24 15:55:02,651 | INFO     | traces error code: 0
[2025-11-24 10:55:04] 2025-11-24 15:55:02,651 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 10:55:04] 2025-11-24 15:55:03,059 [wrapper] ==== pilot stdout END ====
[2025-11-24 10:55:04] 2025-11-24 15:55:03,079 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 10:55:04] 2025-11-24 15:55:03,101 [wrapper] pilotpid: 835465
[2025-11-24 10:55:04] 2025-11-24 15:55:03,116 [wrapper] Pilot exit status: 0
[2025-11-24 10:55:04] 2025-11-24 15:55:03,230 [wrapper] pandaids: 6895346086
[2025-11-24 10:55:04] 2025-11-24 15:55:03,583 [wrapper] cleanup supervisor_pilot 2546950 835466
[2025-11-24 10:55:04] 2025-11-24 15:55:03,594 [wrapper] Test setup, not cleaning
[2025-11-24 10:55:04] 2025-11-24 15:55:03,735 [wrapper] apfmon messages muted
[2025-11-24 10:55:04] 2025-11-24 15:55:03,762 [wrapper] ==== wrapper stdout END ====
[2025-11-24 10:55:04] 2025-11-24 15:55:03,799 [wrapper] ==== wrapper stderr END ====
[2025-11-24 10:55:04]  *** Error codes and diagnostics ***
[2025-11-24 10:55:04]     "exeErrorCode": 0,
[2025-11-24 10:55:04]     "exeErrorDiag": "",
[2025-11-24 10:55:04]     "pilotErrorCode": 0,
[2025-11-24 10:55:04]     "pilotErrorDiag": "",
[2025-11-24 10:55:04]  *** Listing of results directory ***
[2025-11-24 10:55:04] total 1314076
[2025-11-24 10:55:04] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 12:43 pilot3.tar.gz
[2025-11-24 10:55:04] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 12:44 queuedata.json
[2025-11-24 10:55:04] -rwx------. 1 boincer umatlas     36292 Nov 22 12:46 runpilot2-wrapper.sh
[2025-11-24 10:55:04] -rw-r--r--. 1 boincer umatlas       100 Nov 23 19:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 10:55:04] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 19:39 run_atlas
[2025-11-24 10:55:04] -rw-r--r--. 1 boincer umatlas       105 Nov 23 19:39 job.xml
[2025-11-24 10:55:04] -rw-r--r--. 2 boincer umatlas 410614716 Nov 23 19:39 EVNT.47483658._000454.pool.root.1
[2025-11-24 10:55:04] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 19:39 start_atlas.sh
[2025-11-24 10:55:04] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 19:39 shared
[2025-11-24 10:55:04] -rw-r--r--. 2 boincer umatlas    590098 Nov 23 19:39 input.tar.gz
[2025-11-24 10:55:04] -rw-r--r--. 1 boincer umatlas         0 Nov 23 19:39 boinc_lockfile
[2025-11-24 10:55:04] -rw-r--r--. 1 boincer umatlas      2784 Nov 23 19:39 pandaJob.out
[2025-11-24 10:55:04] -rw-------. 1 boincer umatlas        57 Nov 23 19:39 setup.sh.local
[2025-11-24 10:55:04] -rw-------. 1 boincer umatlas    989786 Nov 23 19:41 agis_schedconf.cvmfs.json
[2025-11-24 10:55:04] drwx------. 5 boincer umatlas      4096 Nov 23 19:41 pilot3
[2025-11-24 10:55:04] -rw-r--r--. 1 boincer umatlas       533 Nov 24 10:27 boinc_task_state.xml
[2025-11-24 10:55:04] -rw-r--r--. 1 boincer umatlas      7176 Nov 24 10:45 init_data.xml
[2025-11-24 10:55:04] -rw-------. 1 boincer umatlas 913709090 Nov 24 10:51 HITS.47556137._004500.pool.root.1
[2025-11-24 10:55:04] -rw-------. 1 boincer umatlas      1092 Nov 24 10:53 memory_monitor_summary.json
[2025-11-24 10:55:04] -rw-------. 1 boincer umatlas   1516227 Nov 24 10:53 agis_ddmendpoints.agis.ALL.json
[2025-11-24 10:55:04] -rw-------. 1 boincer umatlas   2045105 Nov 24 10:53 log.47556137._004500.job.log.tgz.1
[2025-11-24 10:55:04] -rw-------. 1 boincer umatlas        95 Nov 24 10:53 pilot_heartbeat.json
[2025-11-24 10:55:04] -rw-------. 1 boincer umatlas      8664 Nov 24 10:53 heartbeat.json
[2025-11-24 10:55:04] -rw-------. 1 boincer umatlas      4824 Nov 24 10:55 pilotlog.txt
[2025-11-24 10:55:04] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 10:55 boinc_mmap_file
[2025-11-24 10:55:04] -rw-------. 1 boincer umatlas   6640792 Nov 24 10:55 log.47556137._004500.job.log.1
[2025-11-24 10:55:04] -rw-r--r--. 1 boincer umatlas        29 Nov 24 10:55 wrapper_checkpoint.txt
[2025-11-24 10:55:04] -rw-------. 1 boincer umatlas       353 Nov 24 10:55 output.list
[2025-11-24 10:55:04] -rw-r--r--. 1 boincer umatlas       620 Nov 24 10:55 runtime_log
[2025-11-24 10:55:04] -rw-------. 1 boincer umatlas   8704000 Nov 24 10:55 result.tar.gz
[2025-11-24 10:55:04] -rw-r--r--. 1 boincer umatlas      9343 Nov 24 10:55 runtime_log.err
[2025-11-24 10:55:04] -rw-------. 1 boincer umatlas       666 Nov 24 10:55 NYbKDmnr6g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmUDIKDm998ALo.diag
[2025-11-24 10:55:04] -rw-r--r--. 1 boincer umatlas     21808 Nov 24 10:55 stderr.txt
[2025-11-24 10:55:04] HITS file was successfully produced:
[2025-11-24 10:55:04] -rw-------. 1 boincer umatlas 913709090 Nov 24 10:51 shared/HITS.pool.root.1
[2025-11-24 10:55:04]  *** Contents of shared directory: ***
[2025-11-24 10:55:04] total 1302392
[2025-11-24 10:55:04] -rw-r--r--. 2 boincer umatlas 410614716 Nov 23 19:39 ATLAS.root_0
[2025-11-24 10:55:04] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 19:39 start_atlas.sh
[2025-11-24 10:55:04] -rw-r--r--. 2 boincer umatlas    590098 Nov 23 19:39 input.tar.gz
[2025-11-24 10:55:04] -rw-------. 1 boincer umatlas 913709090 Nov 24 10:51 HITS.pool.root.1
[2025-11-24 10:55:04] -rw-------. 1 boincer umatlas   8704000 Nov 24 10:55 result.tar.gz
10:55:05 (825112): run_atlas exited; CPU time 143145.137673
10:55:05 (825112): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN