Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:35 (3916302): wrapper (7.7.26015): starting
00:01:35 (3916302): wrapper: running run_atlas (--nthreads 9)
[2025-11-24 00:01:35] Arguments: --nthreads 9
[2025-11-24 00:01:35] Threads: 9
[2025-11-24 00:01:35] Checking for CVMFS
[2025-11-24 00:01:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:01:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:01:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:01:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:01:39] 2.13.3.0 9230 26589 318716 153233 1 131 29286702 32503809 26153 16776704 0 198341717 99.829 84131426 34260 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 00:01:39] CVMFS is ok
[2025-11-24 00:01:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:01:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:01:39] Further information can be found at the LHC@home message board.
[2025-11-24 00:01:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:01:39] Checking for apptainer binary...
[2025-11-24 00:01:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:01:39] Running /usr/bin/apptainer --version
[2025-11-24 00:01:39] apptainer version 1.4.4-1.el9
[2025-11-24 00:01:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:01:40] c-4-35.aglt2.org
[2025-11-24 00:01:40] apptainer works
[2025-11-24 00:01:40] Set ATHENA_PROC_NUMBER=9
[2025-11-24 00:01:40] Set ATHENA_CORE_NUMBER=9
[2025-11-24 00:01:40] Starting ATLAS job with PandaID=6895344230
[2025-11-24 00:01:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 08:06:33]  *** The last 200 lines of the pilot log: ***
[2025-11-25 08:06:33] 2025-11-25 13:05:43,344 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 08:06:33] 2025-11-25 13:05:45,204 | INFO     | time since job start (115375s) is within the limit (172800.0s)
[2025-11-25 08:06:33] 2025-11-25 13:05:45,858 | INFO     | monitor loop #6403: job 0:6895344230 is in state 'finished'
[2025-11-25 08:06:33] 2025-11-25 13:05:45,858 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 08:06:33] 2025-11-25 13:05:47,212 | INFO     | time since job start (115377s) is within the limit (172800.0s)
[2025-11-25 08:06:33] 2025-11-25 13:05:48,370 | INFO     | monitor loop #6404: job 0:6895344230 is in state 'finished'
[2025-11-25 08:06:33] 2025-11-25 13:05:48,370 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 08:06:33] 2025-11-25 13:05:49,221 | INFO     | time since job start (115379s) is within the limit (172800.0s)
[2025-11-25 08:06:33] 2025-11-25 13:05:50,895 | INFO     | monitor loop #6405: job 0:6895344230 is in state 'finished'
[2025-11-25 08:06:33] 2025-11-25 13:05:50,895 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 08:06:33] 2025-11-25 13:05:51,229 | INFO     | time since job start (115381s) is within the limit (172800.0s)
[2025-11-25 08:06:33] 2025-11-25 13:05:53,236 | INFO     | time since job start (115383s) is within the limit (172800.0s)
[2025-11-25 08:06:33] 2025-11-25 13:05:53,400 | INFO     | monitor loop #6406: job 0:6895344230 is in state 'finished'
[2025-11-25 08:06:33] 2025-11-25 13:05:53,400 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 08:06:33] 2025-11-25 13:05:53,704 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 08:06:33] 2025-11-25 13:05:53,753 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1841000000004
[2025-11-25 08:06:33] 2025-11-25 13:05:53,769 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895344230/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 08:06:33] 2025-11-25 13:05:53,795 | INFO     | extracted standard info from prmon json
[2025-11-25 08:06:33] 2025-11-25 13:05:53,795 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 08:06:33] 2025-11-25 13:05:53,795 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 08:06:33] 2025-11-25 13:05:54,009 | INFO     | fitting pss+swap vs Time
[2025-11-25 08:06:33] 2025-11-25 13:05:54,016 | INFO     | sum of square deviations: 2089972056023.6191
[2025-11-25 08:06:33] 2025-11-25 13:05:54,236 | INFO     | sum of deviations: 9373067152606.355
[2025-11-25 08:06:33] 2025-11-25 13:05:54,236 | INFO     | mean x: 1764018267.5182636
[2025-11-25 08:06:33] 2025-11-25 13:05:54,236 | INFO     | mean y: 3015168.960825834
[2025-11-25 08:06:33] 2025-11-25 13:05:54,236 | INFO     | intersect: -7908220597.191519
[2025-11-25 08:06:33] 2025-11-25 13:05:54,243 | INFO     | chi2: 30.856678563592794
[2025-11-25 08:06:33] 2025-11-25 13:05:54,248 | INFO     | sum of square deviations: 2073420132690.8745
[2025-11-25 08:06:33] 2025-11-25 13:05:54,432 | INFO     | sum of deviations: 10022463791513.562
[2025-11-25 08:06:33] 2025-11-25 13:05:54,432 | INFO     | mean x: 1764018115.0244162
[2025-11-25 08:06:33] 2025-11-25 13:05:54,432 | INFO     | mean y: 3021151.1401273888
[2025-11-25 08:06:33] 2025-11-25 13:05:54,433 | INFO     | intersect: -8523860307.496743
[2025-11-25 08:06:33] 2025-11-25 13:05:54,441 | INFO     | chi2: 27.61113542074155
[2025-11-25 08:06:33] 2025-11-25 13:05:54,442 | INFO     | current chi2=27.61113542074155 (change=10.518122150323068 %)
[2025-11-25 08:06:33] 2025-11-25 13:05:54,442 | INFO     | right removable region: 1883
[2025-11-25 08:06:33] 2025-11-25 13:05:54,444 | INFO     | sum of square deviations: 2073417345901.826
[2025-11-25 08:06:33] 2025-11-25 13:05:55,108 | INFO     | sum of deviations: 8598482830732.4795
[2025-11-25 08:06:33] 2025-11-25 13:05:55,109 | INFO     | mean x: 1764018420.024947
[2025-11-25 08:06:33] 2025-11-25 13:05:55,109 | INFO     | mean y: 3022303.7139065815
[2025-11-25 08:06:33] 2025-11-25 13:05:55,109 | INFO     | intersect: -7312380033.234867
[2025-11-25 08:06:33] 2025-11-25 13:05:55,137 | INFO     | chi2: 26.97898693220234
[2025-11-25 08:06:33] 2025-11-25 13:05:55,137 | INFO     | current chi2=26.97898693220234 (change=12.566782336598175 %)
[2025-11-25 08:06:33] 2025-11-25 13:05:55,137 | INFO     | left removable region: 10
[2025-11-25 08:06:33] 2025-11-25 13:05:55,172 | INFO     | sum of square deviations: 2037308479893.3677
[2025-11-25 08:06:33] 2025-11-25 13:05:55,318 | INFO     | time since job start (115385s) is within the limit (172800.0s)
[2025-11-25 08:06:33] 2025-11-25 13:05:55,573 | INFO     | sum of deviations: 8637630376868.061
[2025-11-25 08:06:33] 2025-11-25 13:05:55,573 | INFO     | mean x: 1764018389.5392418
[2025-11-25 08:06:33] 2025-11-25 13:05:55,574 | INFO     | mean y: 3036281.645488521
[2025-11-25 08:06:33] 2025-11-25 13:05:55,574 | INFO     | intersect: -7475918907.131582
[2025-11-25 08:06:33] 2025-11-25 13:05:55,581 | INFO     | chi2: 19.736141273169846
[2025-11-25 08:06:33] 2025-11-25 13:05:55,581 | INFO     | current memory leak: 4.24 B/s (using 1873 data points, chi2=19.74)
[2025-11-25 08:06:33] 2025-11-25 13:05:55,588 | INFO     | could have reported an average CPU frequency of 2600 MHz (66 samples)
[2025-11-25 08:06:33] 2025-11-25 13:05:55,589 | INFO     | ..............................
[2025-11-25 08:06:33] 2025-11-25 13:05:55,589 | INFO     | . Timing measurements:
[2025-11-25 08:06:33] 2025-11-25 13:05:55,589 | INFO     | . get job = 0 s
[2025-11-25 08:06:33] 2025-11-25 13:05:55,589 | INFO     | . initial setup = 8 s
[2025-11-25 08:06:33] 2025-11-25 13:05:55,589 | INFO     | . payload setup = 27 s
[2025-11-25 08:06:33] 2025-11-25 13:05:55,589 | INFO     | . stage-in = 0 s
[2025-11-25 08:06:33] 2025-11-25 13:05:55,589 | INFO     | . payload execution = 115232 s
[2025-11-25 08:06:33] 2025-11-25 13:05:55,589 | INFO     | . stage-out = 12 s
[2025-11-25 08:06:33] 2025-11-25 13:05:55,590 | INFO     | . log creation = 4 s
[2025-11-25 08:06:33] 2025-11-25 13:05:55,590 | INFO     | ..............................
[2025-11-25 08:06:33] 2025-11-25 13:05:56,052 | INFO     | 
[2025-11-25 08:06:33] 2025-11-25 13:05:56,052 | INFO     | job summary report
[2025-11-25 08:06:33] 2025-11-25 13:05:56,052 | INFO     | --------------------------------------------------
[2025-11-25 08:06:33] 2025-11-25 13:05:56,052 | INFO     | PanDA job id: 6895344230
[2025-11-25 08:06:33] 2025-11-25 13:05:56,052 | INFO     | task id: 47556149
[2025-11-25 08:06:33] 2025-11-25 13:05:56,053 | INFO     | errors: (none)
[2025-11-25 08:06:33] 2025-11-25 13:05:56,053 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 08:06:33] 2025-11-25 13:05:56,053 | INFO     | pilot state: finished 
[2025-11-25 08:06:33] 2025-11-25 13:05:56,053 | INFO     | transexitcode: 0
[2025-11-25 08:06:33] 2025-11-25 13:05:56,053 | INFO     | exeerrorcode: 0
[2025-11-25 08:06:33] 2025-11-25 13:05:56,053 | INFO     | exeerrordiag: 
[2025-11-25 08:06:33] 2025-11-25 13:05:56,053 | INFO     | exitcode: 0
[2025-11-25 08:06:33] 2025-11-25 13:05:56,053 | INFO     | exitmsg: OK
[2025-11-25 08:06:33] 2025-11-25 13:05:56,053 | INFO     | cpuconsumptiontime: 300529 s
[2025-11-25 08:06:33] 2025-11-25 13:05:56,053 | INFO     | nevents: 1000
[2025-11-25 08:06:33] 2025-11-25 13:05:56,053 | INFO     | neventsw: 0
[2025-11-25 08:06:33] 2025-11-25 13:05:56,054 | INFO     | pid: 3942585
[2025-11-25 08:06:33] 2025-11-25 13:05:56,054 | INFO     | pgrp: 3942585
[2025-11-25 08:06:33] 2025-11-25 13:05:56,054 | INFO     | corecount: 9
[2025-11-25 08:06:33] 2025-11-25 13:05:56,093 | INFO     | event service: False
[2025-11-25 08:06:33] 2025-11-25 13:05:56,094 | INFO     | sizes: {0: 2297976, 1: 2298661, 2: 2298661, 3: 2298860, 4: 2298916, 15: 2298916, 27: 2299072, 34: 2299362, 38: 2299390, 115266: 2376334, 115267: 2376333, 115280: 2
[2025-11-25 08:06:33] 2025-11-25 13:05:56,094 | INFO     | --------------------------------------------------
[2025-11-25 08:06:33] 2025-11-25 13:05:56,094 | INFO     | 
[2025-11-25 08:06:33] 2025-11-25 13:05:56,094 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 08:06:33] 2025-11-25 13:05:56,207 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 08:06:33] 2025-11-25 13:05:56,207 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 08:06:33] 2025-11-25 13:05:56,207 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 08:06:33] 2025-11-25 13:05:56,207 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 08:06:33] 2025-11-25 13:05:56,207 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 08:06:33] 2025-11-25 13:05:56,207 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 08:06:33] 2025-11-25 13:05:56,208 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 08:06:33] 2025-11-25 13:05:56,208 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 08:06:33] 2025-11-25 13:05:56,208 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 08:06:33] 2025-11-25 13:05:56,208 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 08:06:33] 2025-11-25 13:05:56,208 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 08:06:33] 2025-11-25 13:05:56,208 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 08:06:33] 2025-11-25 13:05:56,208 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 08:06:33] 2025-11-25 13:05:56,208 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 08:06:33] 2025-11-25 13:05:56,208 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 08:06:33] 2025-11-25 13:05:56,209 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 08:06:33] 2025-11-25 13:05:56,209 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 08:06:33] 2025-11-25 13:05:56,209 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 08:06:33] 2025-11-25 13:05:56,209 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 08:06:33] 2025-11-25 13:05:56,209 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 08:06:33] 2025-11-25 13:05:56,209 | INFO     | job 6895344230 has completed (purged errors)
[2025-11-25 08:06:33] 2025-11-25 13:05:56,209 | INFO     | overall cleanup function is called
[2025-11-25 08:06:33] 2025-11-25 13:05:57,258 | INFO     | --- collectZombieJob: --- 10, [3942585]
[2025-11-25 08:06:33] 2025-11-25 13:05:57,258 | INFO     | zombie collector waiting for pid 3942585
[2025-11-25 08:06:33] 2025-11-25 13:05:57,258 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 08:06:33] 2025-11-25 13:05:57,258 | INFO     | collected zombie processes
[2025-11-25 08:06:33] 2025-11-25 13:05:57,259 | INFO     | will attempt to kill all subprocesses of pid=3942585
[2025-11-25 08:06:33] 2025-11-25 13:05:58,680 | INFO     | process IDs to be killed: [3942585] (in reverse order)
[2025-11-25 08:06:33] 2025-11-25 13:05:59,753 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 08:06:33] 2025-11-25 13:05:59,754 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 08:06:33] 2025-11-25 13:05:59,832 | INFO     | did not find any defunct processes belonging to 3942585
[2025-11-25 08:06:33] 2025-11-25 13:05:59,896 | INFO     | did not find any defunct processes belonging to 3942585
[2025-11-25 08:06:33] 2025-11-25 13:05:59,910 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 08:06:33] 2025-11-25 13:05:59,911 | INFO     | ready for new job
[2025-11-25 08:06:33] 2025-11-25 13:05:59,911 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 08:06:33] 2025-11-25 13:05:59,942 | INFO     | ***************************************
[2025-11-25 08:06:33] 2025-11-25 13:05:59,942 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 08:06:33] 2025-11-25 13:05:59,942 | INFO     | ***************************************
[2025-11-25 08:06:33] 2025-11-25 13:05:59,943 | INFO     | 
[2025-11-25 08:06:33] 2025-11-25 13:05:59,944 | INFO     | architecture information:
[2025-11-25 08:06:33] 2025-11-25 13:05:59,955 | INFO     | executing command: cat /etc/os-release
[2025-11-25 08:06:33] 2025-11-25 13:05:59,999 | INFO     | cat /etc/os-release:
[2025-11-25 08:06:33] NAME="CentOS Linux"
[2025-11-25 08:06:33] VERSION="7 (Core)"
[2025-11-25 08:06:33] ID="centos"
[2025-11-25 08:06:33] ID_LIKE="rhel fedora"
[2025-11-25 08:06:33] VERSION_ID="7"
[2025-11-25 08:06:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 08:06:33] ANSI_COLOR="0;31"
[2025-11-25 08:06:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 08:06:33] HOME_URL="https://www.centos.org/"
[2025-11-25 08:06:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 08:06:33] 
[2025-11-25 08:06:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 08:06:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 08:06:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 08:06:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 08:06:33] 
[2025-11-25 08:06:33] 2025-11-25 13:06:00,000 | INFO     | ***************************************
[2025-11-25 08:06:33] 2025-11-25 13:06:00,528 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 08:06:33] 2025-11-25 13:06:00,620 | INFO     | sufficient remaining disk space (91323629568 B)
[2025-11-25 08:06:33] 2025-11-25 13:06:00,620 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 08:06:33] 2025-11-25 13:06:00,620 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 08:06:33] 2025-11-25 13:06:00,620 | INFO     | update_server=False
[2025-11-25 08:06:33] 2025-11-25 13:06:00,621 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 08:06:33] 2025-11-25 13:06:00,621 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 08:06:33] 2025-11-25 13:06:00,900 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 08:06:33] 2025-11-25 13:06:00,994 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 08:06:33] 2025-11-25 13:06:00,994 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 08:06:33] 2025-11-25 13:06:00,994 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 08:06:33] 2025-11-25 13:06:00,994 | INFO     | will abort loop
[2025-11-25 08:06:33] 2025-11-25 13:06:01,056 | INFO     | all payload control threads have been joined
[2025-11-25 08:06:33] 2025-11-25 13:06:01,110 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 08:06:33] 2025-11-25 13:06:01,644 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 08:06:33] 2025-11-25 13:06:01,651 | INFO     | [job] retrieve thread has finished
[2025-11-25 08:06:33] 2025-11-25 13:06:01,733 | INFO     | all data control threads have been joined
[2025-11-25 08:06:33] 2025-11-25 13:06:01,747 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 08:06:33] 2025-11-25 13:06:01,922 | INFO     | [job] queue monitor thread has finished
[2025-11-25 08:06:33] 2025-11-25 13:06:02,037 | INFO     | [job] job monitor thread has finished
[2025-11-25 08:06:33] 2025-11-25 13:06:02,085 | INFO     | [payload] control thread has finished
[2025-11-25 08:06:33] 2025-11-25 13:06:02,164 | INFO     | [payload] validate_post thread has finished
[2025-11-25 08:06:33] 2025-11-25 13:06:02,191 | INFO     | [payload] failed_post thread has finished
[2025-11-25 08:06:33] 2025-11-25 13:06:02,418 | INFO     | all job control threads have been joined
[2025-11-25 08:06:33] 2025-11-25 13:06:02,657 | INFO     | [data] copytool_out thread has finished
[2025-11-25 08:06:33] 2025-11-25 13:06:02,741 | INFO     | [data] control thread has finished
[2025-11-25 08:06:33] 2025-11-25 13:06:02,770 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 08:06:33] 2025-11-25 13:06:02,935 | INFO     | [data] copytool_in thread has finished
[2025-11-25 08:06:33] 2025-11-25 13:06:02,944 | INFO     | [job] validate thread has finished
[2025-11-25 08:06:33] 2025-11-25 13:06:02,964 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 08:06:33] 2025-11-25 13:06:03,428 | INFO     | [job] control thread has finished
[2025-11-25 08:06:33] 2025-11-25 13:06:05,122 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 08:06:33] 2025-11-25 13:06:23,919 | INFO     | [monitor] cgroup control has ended
[2025-11-25 08:06:33] 2025-11-25 13:06:25,938 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140043562600256)>', '<ExcThread(monitor, started 140043196798720)>']
[2025-11-25 08:06:33] 2025-11-25 13:06:30,534 | INFO     | PID=3925055 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 08:06:33] 2025-11-25 13:06:30,542 | INFO     | .. there are 44 such processes running
[2025-11-25 08:06:33] 2025-11-25 13:06:30,543 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 08:06:33] 2025-11-25 13:06:30,543 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 08:06:33] 2025-11-25 13:06:30,543 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 08:06:33] 2025-11-25 13:06:30,544 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 08:06:33] 2025-11-25 13:06:30,544 | INFO     | [monitor] control thread has ended
[2025-11-25 08:06:33] 2025-11-25 13:06:31,069 | INFO     | all workflow threads have been joined
[2025-11-25 08:06:33] 2025-11-25 13:06:31,095 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 08:06:33] 2025-11-25 13:06:31,095 | INFO     | traces error code: 0
[2025-11-25 08:06:33] 2025-11-25 13:06:31,095 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 08:06:33] 2025-11-25 13:06:31,663 [wrapper] ==== pilot stdout END ====
[2025-11-25 08:06:33] 2025-11-25 13:06:31,692 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 08:06:33] 2025-11-25 13:06:31,759 [wrapper] pilotpid: 3925055
[2025-11-25 08:06:33] 2025-11-25 13:06:31,787 [wrapper] Pilot exit status: 0
[2025-11-25 08:06:33] 2025-11-25 13:06:31,979 [wrapper] pandaids: 6895344230
[2025-11-25 08:06:33] 2025-11-25 13:06:32,497 [wrapper] cleanup supervisor_pilot 1665353 3925056
[2025-11-25 08:06:33] 2025-11-25 13:06:32,522 [wrapper] Test setup, not cleaning
[2025-11-25 08:06:33] 2025-11-25 13:06:32,589 [wrapper] apfmon messages muted
[2025-11-25 08:06:33] 2025-11-25 13:06:32,609 [wrapper] ==== wrapper stdout END ====
[2025-11-25 08:06:33] 2025-11-25 13:06:32,667 [wrapper] ==== wrapper stderr END ====
[2025-11-25 08:06:33]  *** Error codes and diagnostics ***
[2025-11-25 08:06:33]     "exeErrorCode": 0,
[2025-11-25 08:06:33]     "exeErrorDiag": "",
[2025-11-25 08:06:33]     "pilotErrorCode": 0,
[2025-11-25 08:06:33]     "pilotErrorDiag": "",
[2025-11-25 08:06:33]  *** Listing of results directory ***
[2025-11-25 08:06:33] total 1331088
[2025-11-25 08:06:33] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 11:22 pilot3.tar.gz
[2025-11-25 08:06:33] -rwx------. 1 boincer umatlas     36292 Nov 22 11:50 runpilot2-wrapper.sh
[2025-11-25 08:06:33] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 11:50 queuedata.json
[2025-11-25 08:06:33] -rw-r--r--. 1 boincer umatlas       100 Nov 24 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 08:06:33] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 00:01 run_atlas
[2025-11-25 08:06:33] -rw-r--r--. 1 boincer umatlas       105 Nov 24 00:01 job.xml
[2025-11-25 08:06:33] -rw-r--r--. 2 boincer umatlas 411493800 Nov 24 00:01 EVNT.47483658._001102.pool.root.1
[2025-11-25 08:06:33] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:01 start_atlas.sh
[2025-11-25 08:06:33] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 00:01 shared
[2025-11-25 08:06:33] -rw-r--r--. 2 boincer umatlas    590098 Nov 24 00:01 input.tar.gz
[2025-11-25 08:06:33] -rw-r--r--. 1 boincer umatlas         0 Nov 24 00:01 boinc_lockfile
[2025-11-25 08:06:33] -rw-r--r--. 1 boincer umatlas      2784 Nov 24 00:01 pandaJob.out
[2025-11-25 08:06:33] -rw-------. 1 boincer umatlas        57 Nov 24 00:01 setup.sh.local
[2025-11-25 08:06:33] -rw-------. 1 boincer umatlas    989786 Nov 24 00:02 agis_schedconf.cvmfs.json
[2025-11-25 08:06:33] drwx------. 5 boincer umatlas      4096 Nov 24 00:02 pilot3
[2025-11-25 08:06:33] -rw-r--r--. 1 boincer umatlas       534 Nov 25 07:12 boinc_task_state.xml
[2025-11-25 08:06:33] -rw-r--r--. 1 boincer umatlas      6662 Nov 25 08:01 init_data.xml
[2025-11-25 08:06:33] -rw-------. 1 boincer umatlas 914132427 Nov 25 08:03 HITS.47556149._000886.pool.root.1
[2025-11-25 08:06:33] -rw-------. 1 boincer umatlas      1070 Nov 25 08:04 memory_monitor_summary.json
[2025-11-25 08:06:33] -rw-------. 1 boincer umatlas   1516240 Nov 25 08:05 agis_ddmendpoints.agis.ALL.json
[2025-11-25 08:06:33] -rw-------. 1 boincer umatlas   2865939 Nov 25 08:05 log.47556149._000886.job.log.tgz.1
[2025-11-25 08:06:33] -rw-------. 1 boincer umatlas      8649 Nov 25 08:05 heartbeat.json
[2025-11-25 08:06:33] -rw-------. 1 boincer umatlas        95 Nov 25 08:06 pilot_heartbeat.json
[2025-11-25 08:06:33] -rw-------. 1 boincer umatlas      5010 Nov 25 08:06 pilotlog.txt
[2025-11-25 08:06:33] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 08:06 boinc_mmap_file
[2025-11-25 08:06:33] -rw-r--r--. 1 boincer umatlas        30 Nov 25 08:06 wrapper_checkpoint.txt
[2025-11-25 08:06:33] -rw-------. 1 boincer umatlas  13879026 Nov 25 08:06 log.47556149._000886.job.log.1
[2025-11-25 08:06:33] -rw-------. 1 boincer umatlas       353 Nov 25 08:06 output.list
[2025-11-25 08:06:33] -rw-r--r--. 1 boincer umatlas       620 Nov 25 08:06 runtime_log
[2025-11-25 08:06:33] -rw-------. 1 boincer umatlas  16762880 Nov 25 08:06 result.tar.gz
[2025-11-25 08:06:33] -rw-r--r--. 1 boincer umatlas      9334 Nov 25 08:06 runtime_log.err
[2025-11-25 08:06:33] -rw-------. 1 boincer umatlas       665 Nov 25 08:06 B10NDmwz5g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjHKKDmzaqXFo.diag
[2025-11-25 08:06:33] -rw-r--r--. 1 boincer umatlas     21814 Nov 25 08:06 stderr.txt
[2025-11-25 08:06:34] HITS file was successfully produced:
[2025-11-25 08:06:34] -rw-------. 1 boincer umatlas 914132427 Nov 25 08:03 shared/HITS.pool.root.1
[2025-11-25 08:06:34]  *** Contents of shared directory: ***
[2025-11-25 08:06:34] total 1311536
[2025-11-25 08:06:34] -rw-r--r--. 2 boincer umatlas 411493800 Nov 24 00:01 ATLAS.root_0
[2025-11-25 08:06:34] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:01 start_atlas.sh
[2025-11-25 08:06:34] -rw-r--r--. 2 boincer umatlas    590098 Nov 24 00:01 input.tar.gz
[2025-11-25 08:06:34] -rw-------. 1 boincer umatlas 914132427 Nov 25 08:03 HITS.pool.root.1
[2025-11-25 08:06:34] -rw-------. 1 boincer umatlas  16762880 Nov 25 08:06 result.tar.gz
08:06:36 (3916302): run_atlas exited; CPU time 304321.906905
08:06:36 (3916302): called boinc_finish(0)

</stderr_txt>
]]>

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