Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:54:49 (3071236): wrapper (7.7.26015): starting
22:54:49 (3071236): wrapper: running run_atlas (--nthreads 6)
[2025-11-25 22:54:49] Arguments: --nthreads 6
[2025-11-25 22:54:49] Threads: 6
[2025-11-25 22:54:49] Checking for CVMFS
[2025-11-25 22:55:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 22:55:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 22:55:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 22:55:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 22:55:51] 2.13.3.0 3071455 0 31036 153284 3 1 43251173 52428801 0 130560 0 0 0.000 1293 54 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-11-25 22:55:51] CVMFS is ok
[2025-11-25 22:55:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 22:55:51] Checking for apptainer binary...
[2025-11-25 22:55:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 22:55:51] Running /usr/bin/apptainer --version
[2025-11-25 22:55:51] apptainer version 1.4.4-1.el9
[2025-11-25 22:55:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 22:55:51] testio008
[2025-11-25 22:55:51] apptainer works
[2025-11-25 22:55:51] Set ATHENA_PROC_NUMBER=6
[2025-11-25 22:55:51] Set ATHENA_CORE_NUMBER=6
[2025-11-25 22:55:51] Starting ATLAS job with PandaID=6895352867
[2025-11-25 22:55:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 06:04:22]  *** The last 200 lines of the pilot log: ***
[2025-11-26 06:04:22] 2025-11-25 21:03:55,895 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 06:04:22] 2025-11-25 21:03:55,895 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 06:04:22] 2025-11-25 21:03:55,897 | INFO     | fitting pss+swap vs Time
[2025-11-26 06:04:22] 2025-11-25 21:03:55,897 | INFO     | sum of square deviations: 22646692524.5
[2025-11-26 06:04:22] 2025-11-25 21:03:55,898 | INFO     | sum of deviations: 365909126531.0
[2025-11-26 06:04:22] 2025-11-25 21:03:55,898 | INFO     | mean x: 1764091791.5
[2025-11-26 06:04:22] 2025-11-25 21:03:55,898 | INFO     | mean y: 2607230.971291866
[2025-11-26 06:04:22] 2025-11-25 21:03:55,898 | INFO     | intersect: -28500331370.32556
[2025-11-26 06:04:22] 2025-11-25 21:03:55,898 | INFO     | chi2: 8.073164228625593
[2025-11-26 06:04:22] 2025-11-25 21:03:55,898 | INFO     | sum of square deviations: 21843691422.0
[2025-11-26 06:04:22] 2025-11-25 21:03:55,899 | INFO     | sum of deviations: 494206651424.0
[2025-11-26 06:04:22] 2025-11-25 21:03:55,899 | INFO     | mean x: 1764091639.0
[2025-11-26 06:04:22] 2025-11-25 21:03:55,899 | INFO     | mean y: 2631609.0653753025
[2025-11-26 06:04:22] 2025-11-25 21:03:55,899 | INFO     | intersect: -39909387146.02477
[2025-11-26 06:04:22] 2025-11-25 21:03:55,899 | INFO     | chi2: 4.883986261115233
[2025-11-26 06:04:22] 2025-11-25 21:03:55,900 | INFO     | current chi2=4.883986261115233 (change=39.50344471133469 %)
[2025-11-26 06:04:22] 2025-11-25 21:03:55,900 | INFO     | sum of square deviations: 21059899982.0
[2025-11-26 06:04:22] 2025-11-25 21:03:55,901 | INFO     | sum of deviations: 504666171242.0
[2025-11-26 06:04:22] 2025-11-25 21:03:55,901 | INFO     | mean x: 1764091486.5
[2025-11-26 06:04:22] 2025-11-25 21:03:55,901 | INFO     | mean y: 2633615.5588235296
[2025-11-26 06:04:22] 2025-11-25 21:03:55,901 | INFO     | intersect: -42270943038.34209
[2025-11-26 06:04:22] 2025-11-25 21:03:55,901 | INFO     | chi2: 4.698672856095092
[2025-11-26 06:04:22] 2025-11-25 21:03:55,901 | INFO     | current chi2=4.698672856095092 (change=3.7943064356169067 %)
[2025-11-26 06:04:22] 2025-11-25 21:03:55,901 | INFO     | right removable region: 407
[2025-11-26 06:04:22] 2025-11-25 21:03:55,901 | INFO     | sum of square deviations: 21843691422.0
[2025-11-26 06:04:22] 2025-11-25 21:03:55,902 | INFO     | sum of deviations: 240864601951.99997
[2025-11-26 06:04:22] 2025-11-25 21:03:55,902 | INFO     | mean x: 1764091944.0
[2025-11-26 06:04:22] 2025-11-25 21:03:55,902 | INFO     | mean y: 2630960.745762712
[2025-11-26 06:04:22] 2025-11-25 21:03:55,902 | INFO     | intersect: -19449543842.929684
[2025-11-26 06:04:22] 2025-11-25 21:03:55,902 | INFO     | chi2: 5.216474101885837
[2025-11-26 06:04:22] 2025-11-25 21:03:55,902 | INFO     | current chi2=5.216474101885837 (change=35.385011946252575 %)
[2025-11-26 06:04:22] 2025-11-25 21:03:55,902 | INFO     | sum of square deviations: 21059899982.0
[2025-11-26 06:04:22] 2025-11-25 21:03:55,903 | INFO     | sum of deviations: 144060767150.49994
[2025-11-26 06:04:22] 2025-11-25 21:03:55,903 | INFO     | mean x: 1764092096.5
[2025-11-26 06:04:22] 2025-11-25 21:03:55,904 | INFO     | mean y: 2649772.713235294
[2025-11-26 06:04:22] 2025-11-25 21:03:55,904 | INFO     | intersect: -12064665882.305803
[2025-11-26 06:04:22] 2025-11-25 21:03:55,904 | INFO     | chi2: 3.5724836868490346
[2025-11-26 06:04:22] 2025-11-25 21:03:55,904 | INFO     | current chi2=3.5724836868490346 (change=31.515356597715577 %)
[2025-11-26 06:04:22] 2025-11-25 21:03:55,904 | INFO     | sum of square deviations: 20295085642.0
[2025-11-26 06:04:22] 2025-11-25 21:03:55,905 | INFO     | sum of deviations: 127277114452.99985
[2025-11-26 06:04:22] 2025-11-25 21:03:55,905 | INFO     | mean x: 1764092249.0
[2025-11-26 06:04:22] 2025-11-25 21:03:55,905 | INFO     | mean y: 2653117.124069479
[2025-11-26 06:04:22] 2025-11-25 21:03:55,905 | INFO     | intersect: -11060545878.053785
[2025-11-26 06:04:22] 2025-11-25 21:03:55,905 | INFO     | chi2: 3.555980604472058
[2025-11-26 06:04:22] 2025-11-25 21:03:55,905 | INFO     | current chi2=3.555980604472058 (change=0.46194983164590425 %)
[2025-11-26 06:04:22] 2025-11-25 21:03:55,905 | INFO     | left removable region: 30
[2025-11-26 06:04:22] 2025-11-25 21:03:55,905 | INFO     | sum of square deviations: 16614964548.0
[2025-11-26 06:04:22] 2025-11-25 21:03:55,906 | INFO     | sum of deviations: 217529430517.99997
[2025-11-26 06:04:22] 2025-11-25 21:03:55,906 | INFO     | mean x: 1764092371.0
[2025-11-26 06:04:22] 2025-11-25 21:03:55,906 | INFO     | mean y: 2692058.0636604773
[2025-11-26 06:04:22] 2025-11-25 21:03:55,906 | INFO     | intersect: -23093475721.058727
[2025-11-26 06:04:22] 2025-11-25 21:03:55,906 | INFO     | chi2: 0.08796361186107944
[2025-11-26 06:04:22] 2025-11-25 21:03:55,906 | INFO     | current memory leak: 13.09 B/s (using 377 data points, chi2=0.09)
[2025-11-26 06:04:22] 2025-11-25 21:03:55,906 | INFO     | could have reported an average CPU frequency of 3590 MHz (17 samples)
[2025-11-26 06:04:22] 2025-11-25 21:03:55,907 | INFO     | ..............................
[2025-11-26 06:04:22] 2025-11-25 21:03:55,907 | INFO     | . Timing measurements:
[2025-11-26 06:04:22] 2025-11-25 21:03:55,907 | INFO     | . get job = 0 s
[2025-11-26 06:04:22] 2025-11-25 21:03:55,907 | INFO     | . initial setup = 5 s
[2025-11-26 06:04:22] 2025-11-25 21:03:55,907 | INFO     | . payload setup = 4 s
[2025-11-26 06:04:22] 2025-11-25 21:03:55,907 | INFO     | . stage-in = 0 s
[2025-11-26 06:04:22] 2025-11-25 21:03:55,907 | INFO     | . payload execution = 25492 s
[2025-11-26 06:04:22] 2025-11-25 21:03:55,907 | INFO     | . stage-out = 4 s
[2025-11-26 06:04:22] 2025-11-25 21:03:55,907 | INFO     | . log creation = 0 s
[2025-11-26 06:04:22] 2025-11-25 21:03:55,907 | INFO     | ..............................
[2025-11-26 06:04:22] 2025-11-25 21:03:56,245 | INFO     | time since job start (25584s) is within the limit (172800.0s)
[2025-11-26 06:04:22] 2025-11-25 21:03:56,297 | INFO     | 
[2025-11-26 06:04:22] 2025-11-25 21:03:56,297 | INFO     | job summary report
[2025-11-26 06:04:22] 2025-11-25 21:03:56,297 | INFO     | --------------------------------------------------
[2025-11-26 06:04:22] 2025-11-25 21:03:56,297 | INFO     | PanDA job id: 6895352867
[2025-11-26 06:04:22] 2025-11-25 21:03:56,297 | INFO     | task id: 47556137
[2025-11-26 06:04:22] 2025-11-25 21:03:56,297 | INFO     | errors: (none)
[2025-11-26 06:04:22] 2025-11-25 21:03:56,297 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 06:04:22] 2025-11-25 21:03:56,297 | INFO     | pilot state: finished 
[2025-11-26 06:04:22] 2025-11-25 21:03:56,297 | INFO     | transexitcode: 0
[2025-11-26 06:04:22] 2025-11-25 21:03:56,297 | INFO     | exeerrorcode: 0
[2025-11-26 06:04:22] 2025-11-25 21:03:56,297 | INFO     | exeerrordiag: 
[2025-11-26 06:04:22] 2025-11-25 21:03:56,297 | INFO     | exitcode: 0
[2025-11-26 06:04:22] 2025-11-25 21:03:56,297 | INFO     | exitmsg: OK
[2025-11-26 06:04:22] 2025-11-25 21:03:56,297 | INFO     | cpuconsumptiontime: 145330 s
[2025-11-26 06:04:22] 2025-11-25 21:03:56,297 | INFO     | nevents: 1000
[2025-11-26 06:04:22] 2025-11-25 21:03:56,297 | INFO     | neventsw: 0
[2025-11-26 06:04:22] 2025-11-25 21:03:56,297 | INFO     | pid: 3082458
[2025-11-26 06:04:22] 2025-11-25 21:03:56,297 | INFO     | pgrp: 3082458
[2025-11-26 06:04:22] 2025-11-25 21:03:56,297 | INFO     | corecount: 6
[2025-11-26 06:04:22] 2025-11-25 21:03:56,297 | INFO     | event service: False
[2025-11-26 06:04:22] 2025-11-25 21:03:56,297 | INFO     | sizes: {0: 2284315, 2: 2284577, 11: 2284605, 25500: 2321025, 25505: 2330019, 25508: 2330075, 25570: 2330513}
[2025-11-26 06:04:22] 2025-11-25 21:03:56,297 | INFO     | --------------------------------------------------
[2025-11-26 06:04:22] 2025-11-25 21:03:56,297 | INFO     | 
[2025-11-26 06:04:22] 2025-11-25 21:03:56,298 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-11-26 06:04:22] 2025-11-25 21:03:56,306 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 06:04:22] 2025-11-25 21:03:56,306 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 06:04:22] 2025-11-25 21:03:56,306 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 06:04:22] 2025-11-25 21:03:56,306 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 06:04:22] 2025-11-25 21:03:56,306 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 06:04:22] 2025-11-25 21:03:56,306 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 06:04:22] 2025-11-25 21:03:56,306 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 06:04:22] 2025-11-25 21:03:56,306 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 06:04:22] 2025-11-25 21:03:56,306 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 06:04:22] 2025-11-25 21:03:56,306 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 06:04:22] 2025-11-25 21:03:56,306 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 06:04:22] 2025-11-25 21:03:56,306 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 06:04:22] 2025-11-25 21:03:56,306 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 06:04:22] 2025-11-25 21:03:56,306 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 06:04:22] 2025-11-25 21:03:56,306 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 06:04:22] 2025-11-25 21:03:56,306 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 06:04:22] 2025-11-25 21:03:56,306 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 06:04:22] 2025-11-25 21:03:56,306 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 06:04:22] 2025-11-25 21:03:56,306 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 06:04:22] 2025-11-25 21:03:56,306 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 06:04:22] 2025-11-25 21:03:56,306 | INFO     | job 6895352867 has completed (purged errors)
[2025-11-26 06:04:22] 2025-11-25 21:03:56,306 | INFO     | overall cleanup function is called
[2025-11-26 06:04:22] 2025-11-25 21:03:57,314 | INFO     | --- collectZombieJob: --- 10, [3082458]
[2025-11-26 06:04:22] 2025-11-25 21:03:57,314 | INFO     | zombie collector waiting for pid 3082458
[2025-11-26 06:04:22] 2025-11-25 21:03:57,314 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 06:04:22] 2025-11-25 21:03:57,314 | INFO     | collected zombie processes
[2025-11-26 06:04:22] 2025-11-25 21:03:57,314 | INFO     | will attempt to kill all subprocesses of pid=3082458
[2025-11-26 06:04:22] 2025-11-25 21:03:57,333 | INFO     | process IDs to be killed: [3082458] (in reverse order)
[2025-11-26 06:04:22] 2025-11-25 21:03:57,346 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 06:04:22] 2025-11-25 21:03:57,346 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 06:04:22] 2025-11-25 21:03:57,347 | INFO     | did not find any defunct processes belonging to 3082458
[2025-11-26 06:04:22] 2025-11-25 21:03:57,348 | INFO     | did not find any defunct processes belonging to 3082458
[2025-11-26 06:04:22] 2025-11-25 21:03:57,348 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 06:04:22] 2025-11-25 21:03:57,348 | INFO     | ready for new job
[2025-11-26 06:04:22] 2025-11-25 21:03:57,348 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 06:04:22] 2025-11-25 21:03:57,349 | INFO     | ***************************************
[2025-11-26 06:04:22] 2025-11-25 21:03:57,349 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 06:04:22] 2025-11-25 21:03:57,349 | INFO     | ***************************************
[2025-11-26 06:04:22] 2025-11-25 21:03:57,349 | INFO     | 
[2025-11-26 06:04:22] 2025-11-25 21:03:57,349 | INFO     | architecture information:
[2025-11-26 06:04:22] 2025-11-25 21:03:57,349 | INFO     | executing command: cat /etc/os-release
[2025-11-26 06:04:22] 2025-11-25 21:03:57,353 | INFO     | cat /etc/os-release:
[2025-11-26 06:04:22] NAME="CentOS Linux"
[2025-11-26 06:04:22] VERSION="7 (Core)"
[2025-11-26 06:04:22] ID="centos"
[2025-11-26 06:04:22] ID_LIKE="rhel fedora"
[2025-11-26 06:04:22] VERSION_ID="7"
[2025-11-26 06:04:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 06:04:22] ANSI_COLOR="0;31"
[2025-11-26 06:04:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 06:04:22] HOME_URL="https://www.centos.org/"
[2025-11-26 06:04:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 06:04:22] 
[2025-11-26 06:04:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 06:04:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 06:04:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 06:04:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 06:04:22] 
[2025-11-26 06:04:22] 2025-11-25 21:03:57,354 | INFO     | ***************************************
[2025-11-26 06:04:22] 2025-11-25 21:03:57,856 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-11-26 06:04:22] 2025-11-25 21:03:57,863 | INFO     | sufficient remaining disk space (288186433536 B)
[2025-11-26 06:04:22] 2025-11-25 21:03:57,863 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 06:04:22] 2025-11-25 21:03:57,864 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 06:04:22] 2025-11-25 21:03:57,864 | INFO     | update_server=False
[2025-11-26 06:04:22] 2025-11-25 21:03:57,864 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 06:04:22] 2025-11-25 21:03:57,864 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:04:22] 2025-11-25 21:03:57,864 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 06:04:22] 2025-11-25 21:03:57,864 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 06:04:22] 2025-11-25 21:03:57,864 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 06:04:22] 2025-11-25 21:03:57,864 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 06:04:22] 2025-11-25 21:03:57,966 | INFO     | all payload control threads have been joined
[2025-11-26 06:04:22] 2025-11-25 21:03:58,170 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 06:04:22] 2025-11-25 21:03:58,322 | INFO     | all data control threads have been joined
[2025-11-26 06:04:22] 2025-11-25 21:03:58,365 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:04:22] 2025-11-25 21:03:58,365 | INFO     | aborting loop
[2025-11-26 06:04:22] 2025-11-25 21:03:58,713 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 06:04:22] 2025-11-25 21:03:58,865 | INFO     | [job] retrieve thread has finished
[2025-11-26 06:04:22] 2025-11-25 21:03:58,869 | INFO     | [job] queue monitor thread has finished
[2025-11-26 06:04:22] 2025-11-25 21:03:58,972 | INFO     | [payload] control thread has finished
[2025-11-26 06:04:22] 2025-11-25 21:03:59,086 | INFO     | [payload] validate_post thread has finished
[2025-11-26 06:04:22] 2025-11-25 21:03:59,225 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 06:04:22] 2025-11-25 21:03:59,327 | INFO     | [data] control thread has finished
[2025-11-26 06:04:22] 2025-11-25 21:03:59,360 | INFO     | all job control threads have been joined
[2025-11-26 06:04:22] 2025-11-25 21:03:59,370 | INFO     | [job] job monitor thread has finished
[2025-11-26 06:04:22] 2025-11-25 21:03:59,427 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 06:04:22] 2025-11-25 21:03:59,462 | INFO     | [data] copytool_in thread has finished
[2025-11-26 06:04:22] 2025-11-25 21:03:59,917 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 06:04:22] 2025-11-25 21:04:00,036 | INFO     | [payload] failed_post thread has finished
[2025-11-26 06:04:22] 2025-11-25 21:04:00,230 | INFO     | [job] validate thread has finished
[2025-11-26 06:04:22] 2025-11-25 21:04:00,292 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 06:04:22] 2025-11-25 21:04:00,365 | INFO     | [job] control thread has finished
[2025-11-26 06:04:22] 2025-11-25 21:04:00,718 | INFO     | [data] copytool_out thread has finished
[2025-11-26 06:04:22] 2025-11-25 21:04:02,176 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 06:04:22] 2025-11-25 21:04:15,168 | INFO     | [monitor] cgroup control has ended
[2025-11-26 06:04:22] 2025-11-25 21:04:17,165 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139691328300864)>', '<ExcThread(monitor, started 139690808153856)>']
[2025-11-26 06:04:22] 2025-11-25 21:04:17,965 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 06:04:22] 2025-11-25 21:04:17,965 | INFO     | [monitor] control thread has ended
[2025-11-26 06:04:22] 2025-11-25 21:04:22,179 | INFO     | all workflow threads have been joined
[2025-11-26 06:04:22] 2025-11-25 21:04:22,179 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 06:04:22] 2025-11-25 21:04:22,179 | INFO     | traces error code: 0
[2025-11-26 06:04:22] 2025-11-25 21:04:22,179 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 06:04:22] 2025-11-25 21:04:22,213 [wrapper] ==== pilot stdout END ====
[2025-11-26 06:04:22] 2025-11-25 21:04:22,214 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 06:04:22] 2025-11-25 21:04:22,215 [wrapper] pilotpid: 3075687
[2025-11-26 06:04:22] 2025-11-25 21:04:22,216 [wrapper] Pilot exit status: 0
[2025-11-26 06:04:22] 2025-11-25 21:04:22,220 [wrapper] pandaids: 6895352867
[2025-11-26 06:04:22] 2025-11-25 21:04:22,228 [wrapper] cleanup supervisor_pilot 3220970 3075688
[2025-11-26 06:04:22] 2025-11-25 21:04:22,229 [wrapper] Test setup, not cleaning
[2025-11-26 06:04:22] 2025-11-25 21:04:22,229 [wrapper] apfmon messages muted
[2025-11-26 06:04:22] 2025-11-25 21:04:22,230 [wrapper] ==== wrapper stdout END ====
[2025-11-26 06:04:22] 2025-11-25 21:04:22,231 [wrapper] ==== wrapper stderr END ====
[2025-11-26 06:04:22]  *** Error codes and diagnostics ***
[2025-11-26 06:04:22]     "exeErrorCode": 0,
[2025-11-26 06:04:22]     "exeErrorDiag": "",
[2025-11-26 06:04:22]     "pilotErrorCode": 0,
[2025-11-26 06:04:22]     "pilotErrorDiag": "",
[2025-11-26 06:04:22]  *** Listing of results directory ***
[2025-11-26 06:04:22] total 1298788
[2025-11-26 06:04:22] -rw-r--r--. 1 boinc boinc    576529 Nov 23 12:47 pilot3.tar.gz
[2025-11-26 06:04:22] -rw-r--r--. 1 boinc boinc      5112 Nov 23 13:27 queuedata.json
[2025-11-26 06:04:22] -rwx------. 1 boinc boinc     36292 Nov 23 13:27 runpilot2-wrapper.sh
[2025-11-26 06:04:22] -rw-r--r--. 1 boinc boinc       100 Nov 25 22:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 06:04:22] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 22:54 run_atlas
[2025-11-26 06:04:22] -rw-r--r--. 1 boinc boinc       105 Nov 25 22:54 job.xml
[2025-11-26 06:04:22] -rw-r--r--. 1 boinc boinc      9515 Nov 25 22:54 init_data.xml
[2025-11-26 06:04:22] -rw-r--r--. 2 boinc boinc 409020898 Nov 25 22:54 EVNT.47483658._000608.pool.root.1
[2025-11-26 06:04:22] -rw-r--r--. 2 boinc boinc     15847 Nov 25 22:54 start_atlas.sh
[2025-11-26 06:04:22] drwxrwx--x. 2 boinc boinc        68 Nov 25 22:54 shared
[2025-11-26 06:04:22] -rw-r--r--. 2 boinc boinc    590097 Nov 25 22:54 input.tar.gz
[2025-11-26 06:04:22] -rw-r--r--. 1 boinc boinc         0 Nov 25 22:54 boinc_lockfile
[2025-11-26 06:04:22] -rw-r--r--. 1 boinc boinc      2786 Nov 25 22:55 pandaJob.out
[2025-11-26 06:04:22] -rw-------. 1 boinc boinc    991909 Nov 25 22:57 agis_schedconf.cvmfs.json
[2025-11-26 06:04:22] drwx------. 5 boinc boinc      4096 Nov 25 22:57 pilot3
[2025-11-26 06:04:22] -rw-r--r--. 1 boinc boinc       532 Nov 26 05:54 boinc_task_state.xml
[2025-11-26 06:04:22] -rw-------. 1 boinc boinc 906890410 Nov 26 06:02 HITS.47556137._006039.pool.root.1
[2025-11-26 06:04:22] -rw-------. 1 boinc boinc      1042 Nov 26 06:02 memory_monitor_summary.json
[2025-11-26 06:04:22] -rw-------. 1 boinc boinc   1516240 Nov 26 06:02 agis_ddmendpoints.agis.ALL.json
[2025-11-26 06:04:22] -rw-------. 1 boinc boinc   1469943 Nov 26 06:02 log.47556137._006039.job.log.tgz.1
[2025-11-26 06:04:22] -rw-------. 1 boinc boinc        95 Nov 26 06:03 pilot_heartbeat.json
[2025-11-26 06:04:22] -rw-------. 1 boinc boinc      8585 Nov 26 06:03 heartbeat.json
[2025-11-26 06:04:22] -rw-r--r--. 1 boinc boinc        29 Nov 26 06:03 wrapper_checkpoint.txt
[2025-11-26 06:04:22] -rw-r--r--. 1 boinc boinc      8192 Nov 26 06:03 boinc_mmap_file
[2025-11-26 06:04:22] -rw-------. 1 boinc boinc      4553 Nov 26 06:04 pilotlog.txt
[2025-11-26 06:04:22] -rw-------. 1 boinc boinc   3597786 Nov 26 06:04 log.47556137._006039.job.log.1
[2025-11-26 06:04:22] -rw-------. 1 boinc boinc       353 Nov 26 06:04 output.list
[2025-11-26 06:04:22] -rw-r--r--. 1 boinc boinc       620 Nov 26 06:04 runtime_log
[2025-11-26 06:04:22] -rw-------. 1 boinc boinc   5089280 Nov 26 06:04 result.tar.gz
[2025-11-26 06:04:22] -rw-------. 1 boinc boinc       650 Nov 26 06:04 YxPODmLsGh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWbKKDmhElz4m.diag
[2025-11-26 06:04:22] -rw-r--r--. 1 boinc boinc      8776 Nov 26 06:04 runtime_log.err
[2025-11-26 06:04:22] -rw-r--r--. 1 boinc boinc     20652 Nov 26 06:04 stderr.txt
[2025-11-26 06:04:22] HITS file was successfully produced:
[2025-11-26 06:04:22] -rw-------. 1 boinc boinc 906890410 Nov 26 06:02 shared/HITS.pool.root.1
[2025-11-26 06:04:22]  *** Contents of shared directory: ***
[2025-11-26 06:04:22] total 1290640
[2025-11-26 06:04:22] -rw-r--r--. 2 boinc boinc 409020898 Nov 25 22:54 ATLAS.root_0
[2025-11-26 06:04:22] -rw-r--r--. 2 boinc boinc     15847 Nov 25 22:54 start_atlas.sh
[2025-11-26 06:04:22] -rw-r--r--. 2 boinc boinc    590097 Nov 25 22:54 input.tar.gz
[2025-11-26 06:04:22] -rw-------. 1 boinc boinc 906890410 Nov 26 06:02 HITS.pool.root.1
[2025-11-26 06:04:22] -rw-------. 1 boinc boinc   5089280 Nov 26 06:04 result.tar.gz
06:04:23 (3071236): run_atlas exited; CPU time 145388.057242
06:04:23 (3071236): called boinc_finish(0)

</stderr_txt>
]]>

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