Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:23:59 (1301999): wrapper (7.7.26015): starting
15:23:59 (1301999): wrapper: running run_atlas (--nthreads 3)
[2025-11-26 15:23:59] Arguments: --nthreads 3
[2025-11-26 15:23:59] Threads: 3
[2025-11-26 15:23:59] Checking for CVMFS
[2025-11-26 15:23:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 15:23:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 15:23:59] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 15:23:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 15:23:59] 2.9.2.0 3973621 11428 91460 153324 3 81 35310676 36864001 0 130560 0 4243356 99.867 675488 8719 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 15:23:59] CVMFS is ok
[2025-11-26 15:23:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 15:23:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 15:23:59] Further information can be found at the LHC@home message board.
[2025-11-26 15:23:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 15:23:59] Checking for apptainer binary...
[2025-11-26 15:23:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 15:23:59] Running /usr/bin/apptainer --version
[2025-11-26 15:23:59] apptainer version 1.4.1-1.1
[2025-11-26 15:23:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 15:23:59] magicA246
[2025-11-26 15:23:59] apptainer works
[2025-11-26 15:24:02] Set ATHENA_PROC_NUMBER=3
[2025-11-26 15:24:02] Set ATHENA_CORE_NUMBER=3
[2025-11-26 15:24:02] Starting ATLAS job with PandaID=6895352802
[2025-11-26 15:24:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 23:22:08]  *** The last 200 lines of the pilot log: ***
[2025-11-26 23:22:08] 2025-11-26 22:21:37,056 | INFO     | ***************************************
[2025-11-26 23:22:08] 2025-11-26 22:21:37,056 | INFO     | 
[2025-11-26 23:22:08] 2025-11-26 22:21:37,056 | INFO     | architecture information:
[2025-11-26 23:22:08] 2025-11-26 22:21:37,056 | INFO     | executing command: cat /etc/os-release
[2025-11-26 23:22:08] 2025-11-26 22:21:37,066 | INFO     | cat /etc/os-release:
[2025-11-26 23:22:08] NAME="CentOS Linux"
[2025-11-26 23:22:08] VERSION="7 (Core)"
[2025-11-26 23:22:08] ID="centos"
[2025-11-26 23:22:08] ID_LIKE="rhel fedora"
[2025-11-26 23:22:08] VERSION_ID="7"
[2025-11-26 23:22:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 23:22:08] ANSI_COLOR="0;31"
[2025-11-26 23:22:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 23:22:08] HOME_URL="https://www.centos.org/"
[2025-11-26 23:22:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 23:22:08] 
[2025-11-26 23:22:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 23:22:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 23:22:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 23:22:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 23:22:08] 
[2025-11-26 23:22:08] 2025-11-26 22:21:37,066 | INFO     | ***************************************
[2025-11-26 23:22:08] 2025-11-26 22:21:37,569 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-26 23:22:08] 2025-11-26 22:21:37,581 | INFO     | sufficient remaining disk space (366607335424 B)
[2025-11-26 23:22:08] 2025-11-26 22:21:37,581 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 23:22:08] 2025-11-26 22:21:37,582 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 23:22:08] 2025-11-26 22:21:37,582 | INFO     | update_server=False
[2025-11-26 23:22:08] 2025-11-26 22:21:37,582 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 23:22:08] 2025-11-26 22:21:37,582 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 23:22:08] 2025-11-26 22:21:37,582 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:22:08] 2025-11-26 22:21:37,611 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 23:22:08] 2025-11-26 22:21:37,611 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 23:22:08] 2025-11-26 22:21:37,611 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:22:08] 2025-11-26 22:21:37,611 | INFO     | will abort loop
[2025-11-26 23:22:08] 2025-11-26 22:21:38,014 | INFO     | all data control threads have been joined
[2025-11-26 23:22:08] 2025-11-26 22:21:38,135 | INFO     | all payload control threads have been joined
[2025-11-26 23:22:08] 2025-11-26 22:21:38,587 | INFO     | [job] retrieve thread has finished
[2025-11-26 23:22:08] 2025-11-26 22:21:38,588 | INFO     | [job] queue monitor thread has finished
[2025-11-26 23:22:08] 2025-11-26 22:21:38,617 | INFO     | [job] job monitor thread has finished
[2025-11-26 23:22:08] 2025-11-26 22:21:38,724 | INFO     | [payload] validate_post thread has finished
[2025-11-26 23:22:08] 2025-11-26 22:21:38,758 | INFO     | all job control threads have been joined
[2025-11-26 23:22:08] 2025-11-26 22:21:38,810 | INFO     | [payload] failed_post thread has finished
[2025-11-26 23:22:08] 2025-11-26 22:21:39,020 | INFO     | [data] control thread has finished
[2025-11-26 23:22:08] 2025-11-26 22:21:39,140 | INFO     | [payload] control thread has finished
[2025-11-26 23:22:08] 2025-11-26 22:21:39,584 | INFO     | [data] copytool_out thread has finished
[2025-11-26 23:22:08] 2025-11-26 22:21:39,594 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 23:22:08] 2025-11-26 22:21:39,764 | INFO     | [job] control thread has finished
[2025-11-26 23:22:08] 2025-11-26 22:21:39,800 | INFO     | [job] validate thread has finished
[2025-11-26 23:22:08] 2025-11-26 22:21:39,805 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 23:22:08] 2025-11-26 22:21:39,805 | INFO     | [data] copytool_in thread has finished
[2025-11-26 23:22:08] 2025-11-26 22:21:39,819 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 23:22:08] 2025-11-26 22:21:39,970 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 23:22:08] 2025-11-26 22:21:40,640 | INFO     | [monitor] cgroup control has ended
[2025-11-26 23:22:08] 2025-11-26 22:21:43,977 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 23:22:08] 2025-11-26 22:21:47,634 | INFO     | job.realtimelogging is not enabled
[2025-11-26 23:22:08] 2025-11-26 22:21:48,640 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 23:22:08] 2025-11-26 22:21:49,224 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140042632906560)>', '<ExcThread(monitor, started 140042148235008)>']
[2025-11-26 23:22:08] 2025-11-26 22:21:54,225 | INFO     | all workflow threads have been joined
[2025-11-26 23:22:08] 2025-11-26 22:21:54,225 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 23:22:08] 2025-11-26 22:21:54,226 | INFO     | traces error code: 0
[2025-11-26 23:22:08] 2025-11-26 22:21:54,226 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 23:22:08] 2025-11-26 22:22:08,378 | INFO     | PID=1305724 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 23:22:08] 2025-11-26 22:22:08,378 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 23:22:08] 2025-11-26 22:22:08,378 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 23:22:08] 2025-11-26 22:22:08,378 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 23:22:08] 2025-11-26 22:22:08,378 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 23:22:08] 2025-11-26 22:22:08,378 | CRITICAL | thread 'MainThread' is not alive
[2025-11-26 23:22:08] 2025-11-26 22:22:08,378 | INFO     | [monitor] control thread has ended
[2025-11-26 23:22:08] 2025-11-26 22:22:08,428 [wrapper] ==== pilot stdout END ====
[2025-11-26 23:22:08] 2025-11-26 22:22:08,431 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 23:22:08] 2025-11-26 22:22:08,433 [wrapper] pilotpid: 1305724
[2025-11-26 23:22:08] 2025-11-26 22:22:08,436 [wrapper] Pilot exit status: 0
[2025-11-26 23:22:08] 2025-11-26 22:22:08,444 [wrapper] pandaids: 6895352802
[2025-11-26 23:22:08] 2025-11-26 22:22:08,461 [wrapper] cleanup supervisor_pilot 1362942 1305725
[2025-11-26 23:22:08] 2025-11-26 22:22:08,464 [wrapper] Test setup, not cleaning
[2025-11-26 23:22:08] 2025-11-26 22:22:08,466 [wrapper] apfmon messages muted
[2025-11-26 23:22:08] 2025-11-26 22:22:08,469 [wrapper] ==== wrapper stdout END ====
[2025-11-26 23:22:08] 2025-11-26 22:22:08,471 [wrapper] ==== wrapper stderr END ====
[2025-11-26 23:22:08]  *** Error codes and diagnostics ***
[2025-11-26 23:22:08]     "exeErrorCode": 0,
[2025-11-26 23:22:08]     "exeErrorDiag": "",
[2025-11-26 23:22:08]     "pilotErrorCode": 0,
[2025-11-26 23:22:08]     "pilotErrorDiag": "",
[2025-11-26 23:22:08]  *** Listing of results directory ***
[2025-11-26 23:22:08] total 1322112
[2025-11-26 23:22:08] -rw-r--r-- 1 boinc boinc    576529 Nov 23 04:47 pilot3.tar.gz
[2025-11-26 23:22:08] -rw-r--r-- 1 boinc boinc      5112 Nov 23 04:53 queuedata.json
[2025-11-26 23:22:08] -rwx------ 1 boinc boinc     36292 Nov 23 04:54 runpilot2-wrapper.sh
[2025-11-26 23:22:08] -rw-r--r-- 1 boinc boinc       100 Nov 26 15:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 23:22:08] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 15:23 run_atlas
[2025-11-26 23:22:08] -rw-r--r-- 1 boinc boinc       105 Nov 26 15:23 job.xml
[2025-11-26 23:22:08] -rw-r--r-- 2 boinc boinc 410422169 Nov 26 15:23 EVNT.47483658._000603.pool.root.1
[2025-11-26 23:22:08] -rw-r--r-- 2 boinc boinc    590103 Nov 26 15:23 input.tar.gz
[2025-11-26 23:22:08] -rw-r--r-- 2 boinc boinc     15847 Nov 26 15:23 start_atlas.sh
[2025-11-26 23:22:08] drwxrwx--x 2 boinc boinc      4096 Nov 26 15:23 shared
[2025-11-26 23:22:08] -rw-r--r-- 1 boinc boinc         0 Nov 26 15:23 boinc_setup_complete
[2025-11-26 23:22:08] -rw-r--r-- 1 boinc boinc      6449 Nov 26 15:23 init_data.xml
[2025-11-26 23:22:08] -rw-r--r-- 1 boinc boinc         0 Nov 26 15:23 boinc_lockfile
[2025-11-26 23:22:08] -rw-r--r-- 1 boinc boinc      2785 Nov 26 15:24 pandaJob.out
[2025-11-26 23:22:08] -rw------- 1 boinc boinc    992360 Nov 26 15:24 agis_schedconf.cvmfs.json
[2025-11-26 23:22:08] drwx------ 5 boinc boinc      4096 Nov 26 15:24 pilot3
[2025-11-26 23:22:08] -rw-r--r-- 1 boinc boinc       531 Nov 26 23:17 boinc_task_state.xml
[2025-11-26 23:22:08] -rw------- 1 boinc boinc 929112401 Nov 26 23:21 HITS.47556137._005988.pool.root.1
[2025-11-26 23:22:08] -rw------- 1 boinc boinc      1033 Nov 26 23:21 memory_monitor_summary.json
[2025-11-26 23:22:08] -rw------- 1 boinc boinc   1516240 Nov 26 23:21 agis_ddmendpoints.agis.ALL.json
[2025-11-26 23:22:08] -rw------- 1 boinc boinc   1169687 Nov 26 23:21 log.47556137._005988.job.log.tgz.1
[2025-11-26 23:22:08] -rw------- 1 boinc boinc        95 Nov 26 23:21 pilot_heartbeat.json
[2025-11-26 23:22:08] -rw------- 1 boinc boinc      8560 Nov 26 23:21 heartbeat.json
[2025-11-26 23:22:08] -rw-r--r-- 1 boinc boinc      8192 Nov 26 23:21 boinc_mmap_file
[2025-11-26 23:22:08] -rw-r--r-- 1 boinc boinc        28 Nov 26 23:21 wrapper_checkpoint.txt
[2025-11-26 23:22:08] -rw------- 1 boinc boinc       817 Nov 26 23:22 pilotlog.txt
[2025-11-26 23:22:08] -rw------- 1 boinc boinc   4031424 Nov 26 23:22 log.47556137._005988.job.log.1
[2025-11-26 23:22:08] -rw------- 1 boinc boinc       353 Nov 26 23:22 output.list
[2025-11-26 23:22:08] -rw-r--r-- 1 boinc boinc       620 Nov 26 23:22 runtime_log
[2025-11-26 23:22:08] -rw------- 1 boinc boinc   5222400 Nov 26 23:22 result.tar.gz
[2025-11-26 23:22:08] -rw-r--r-- 1 boinc boinc      8913 Nov 26 23:22 runtime_log.err
[2025-11-26 23:22:08] -rw------- 1 boinc boinc       668 Nov 26 23:22 XPtMDmWMGh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmVQIKDm23q8xm.diag
[2025-11-26 23:22:08] -rw-r--r-- 1 boinc boinc      9549 Nov 26 23:22 stderr.txt
[2025-11-26 23:22:08] HITS file was successfully produced:
[2025-11-26 23:22:08] -rw------- 1 boinc boinc 929112401 Nov 26 23:21 shared/HITS.pool.root.1
[2025-11-26 23:22:08]  *** Contents of shared directory: ***
[2025-11-26 23:22:08] total 1313848
[2025-11-26 23:22:08] -rw-r--r-- 2 boinc boinc 410422169 Nov 26 15:23 ATLAS.root_0
[2025-11-26 23:22:08] -rw-r--r-- 2 boinc boinc    590103 Nov 26 15:23 input.tar.gz
[2025-11-26 23:22:08] -rw-r--r-- 2 boinc boinc     15847 Nov 26 15:23 start_atlas.sh
[2025-11-26 23:22:08] -rw------- 1 boinc boinc 929112401 Nov 26 23:21 HITS.pool.root.1
[2025-11-26 23:22:08] -rw------- 1 boinc boinc   5222400 Nov 26 23:22 result.tar.gz
23:22:10 (1301999): run_atlas exited; CPU time 84441.970621
23:22:10 (1301999): called boinc_finish(0)

</stderr_txt>
]]>

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