Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:14:55 (2977290): wrapper (7.7.26015): starting
19:14:55 (2977290): wrapper: running run_atlas (--nthreads 6)
[2025-11-24 19:14:55] Arguments: --nthreads 6
[2025-11-24 19:14:55] Threads: 6
[2025-11-24 19:14:55] Checking for CVMFS
[2025-11-24 19:14:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 19:14:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 19:14:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 19:14:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 19:14:56] 2.13.3.0 12099 8195 105320 153240 0 56 43166656 52428801 1832 130560 0 10597959 99.947 549078 23 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.35.143:3126 1
[2025-11-24 19:14:56] CVMFS is ok
[2025-11-24 19:14:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 19:14:56] Checking for apptainer binary...
[2025-11-24 19:14:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 19:14:56] Running /usr/bin/apptainer --version
[2025-11-24 19:14:56] apptainer version 1.4.4-1.el9
[2025-11-24 19:14:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 19:14:56] testio008
[2025-11-24 19:14:56] apptainer works
[2025-11-24 19:14:56] Set ATHENA_PROC_NUMBER=6
[2025-11-24 19:14:56] Set ATHENA_CORE_NUMBER=6
[2025-11-24 19:14:56] Starting ATLAS job with PandaID=6895352846
[2025-11-24 19:14:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 02:31:24]  *** The last 200 lines of the pilot log: ***
[2025-11-25 02:31:24] 2025-11-24 17:30:52,074 | INFO     | fitting pss+swap vs Time
[2025-11-25 02:31:24] 2025-11-24 17:30:52,074 | INFO     | sum of square deviations: 24141363836.604153
[2025-11-25 02:31:24] 2025-11-24 17:30:52,076 | INFO     | sum of deviations: 410855945315.37476
[2025-11-25 02:31:24] 2025-11-24 17:30:52,076 | INFO     | mean x: 1763992346.0304449
[2025-11-25 02:31:24] 2025-11-24 17:30:52,076 | INFO     | mean y: 2657611.817330211
[2025-11-25 02:31:24] 2025-11-24 17:30:52,076 | INFO     | intersect: -30018295129.82242
[2025-11-25 02:31:24] 2025-11-24 17:30:52,076 | INFO     | chi2: 8.07077160474507
[2025-11-25 02:31:24] 2025-11-24 17:30:52,076 | INFO     | sum of square deviations: 23303203249.099735
[2025-11-25 02:31:24] 2025-11-24 17:30:52,078 | INFO     | sum of deviations: 531512415057.882
[2025-11-25 02:31:24] 2025-11-24 17:30:52,078 | INFO     | mean x: 1763992193.5308056
[2025-11-25 02:31:24] 2025-11-24 17:30:52,078 | INFO     | mean y: 2679572.701421801
[2025-11-25 02:31:24] 2025-11-24 17:30:52,078 | INFO     | intersect: -40231435064.007614
[2025-11-25 02:31:24] 2025-11-24 17:30:52,078 | INFO     | chi2: 5.396883386150968
[2025-11-25 02:31:24] 2025-11-24 17:30:52,078 | INFO     | current chi2=5.396883386150968 (change=33.13051526600054 %)
[2025-11-25 02:31:24] 2025-11-24 17:30:52,078 | INFO     | sum of square deviations: 22484670936.594845
[2025-11-25 02:31:24] 2025-11-24 17:30:52,080 | INFO     | sum of deviations: 560539687044.8274
[2025-11-25 02:31:24] 2025-11-24 17:30:52,080 | INFO     | mean x: 1763992041.0311751
[2025-11-25 02:31:24] 2025-11-24 17:30:52,080 | INFO     | mean y: 2684927.474820144
[2025-11-25 02:31:24] 2025-11-24 17:30:52,080 | INFO     | intersect: -43973388790.37015
[2025-11-25 02:31:24] 2025-11-24 17:30:52,080 | INFO     | chi2: 4.779851337165149
[2025-11-25 02:31:24] 2025-11-24 17:30:52,080 | INFO     | current chi2=4.779851337165149 (change=11.433118057899772 %)
[2025-11-25 02:31:24] 2025-11-24 17:30:52,080 | INFO     | right removable region: 416
[2025-11-25 02:31:24] 2025-11-24 17:30:52,080 | INFO     | sum of square deviations: 23303195319.099735
[2025-11-25 02:31:24] 2025-11-24 17:30:52,082 | INFO     | sum of deviations: 281746217866.976
[2025-11-25 02:31:24] 2025-11-24 17:30:52,082 | INFO     | mean x: 1763992498.5308056
[2025-11-25 02:31:24] 2025-11-24 17:30:52,082 | INFO     | mean y: 2681085.0402843603
[2025-11-25 02:31:24] 2025-11-24 17:30:52,082 | INFO     | intersect: -21324789590.168907
[2025-11-25 02:31:24] 2025-11-24 17:30:52,082 | INFO     | chi2: 5.26496905591416
[2025-11-25 02:31:24] 2025-11-24 17:30:52,082 | INFO     | current chi2=5.26496905591416 (change=34.76498513700087 %)
[2025-11-25 02:31:24] 2025-11-24 17:30:52,083 | INFO     | sum of square deviations: 22484655076.594845
[2025-11-25 02:31:24] 2025-11-24 17:30:52,084 | INFO     | sum of deviations: 175176603653.57043
[2025-11-25 02:31:24] 2025-11-24 17:30:52,084 | INFO     | mean x: 1763992651.0311751
[2025-11-25 02:31:24] 2025-11-24 17:30:52,084 | INFO     | mean y: 2700926.263788969
[2025-11-25 02:31:24] 2025-11-24 17:30:52,084 | INFO     | intersect: -13740460373.06875
[2025-11-25 02:31:24] 2025-11-24 17:30:52,084 | INFO     | chi2: 3.4856172699201116
[2025-11-25 02:31:24] 2025-11-24 17:30:52,084 | INFO     | current chi2=3.4856172699201116 (change=33.79605401470111 %)
[2025-11-25 02:31:24] 2025-11-24 17:30:52,085 | INFO     | sum of square deviations: 21685510546.58981
[2025-11-25 02:31:24] 2025-11-24 17:30:52,086 | INFO     | sum of deviations: 151330434971.39563
[2025-11-25 02:31:24] 2025-11-24 17:30:52,086 | INFO     | mean x: 1763992803.5315535
[2025-11-25 02:31:24] 2025-11-24 17:30:52,086 | INFO     | mean y: 2705471.084951456
[2025-11-25 02:31:24] 2025-11-24 17:30:52,086 | INFO     | intersect: -12307163723.432152
[2025-11-25 02:31:24] 2025-11-24 17:30:52,086 | INFO     | chi2: 3.4390708965905135
[2025-11-25 02:31:24] 2025-11-24 17:30:52,087 | INFO     | current chi2=3.4390708965905135 (change=1.3353839427891323 %)
[2025-11-25 02:31:24] 2025-11-24 17:30:52,087 | INFO     | left removable region: 30
[2025-11-25 02:31:24] 2025-11-24 17:30:52,087 | INFO     | sum of square deviations: 17833637944.062218
[2025-11-25 02:31:24] 2025-11-24 17:30:52,088 | INFO     | sum of deviations: 255830498411.43536
[2025-11-25 02:31:24] 2025-11-24 17:30:52,088 | INFO     | mean x: 1763992925.5336788
[2025-11-25 02:31:24] 2025-11-24 17:30:52,088 | INFO     | mean y: 2744196.2357512955
[2025-11-25 02:31:24] 2025-11-24 17:30:52,088 | INFO     | intersect: -25302422968.705128
[2025-11-25 02:31:24] 2025-11-24 17:30:52,088 | INFO     | chi2: 0.08071758604870331
[2025-11-25 02:31:24] 2025-11-24 17:30:52,088 | INFO     | current memory leak: 14.35 B/s (using 386 data points, chi2=0.08)
[2025-11-25 02:31:24] 2025-11-24 17:30:52,089 | INFO     | could have reported an average CPU frequency of 3468 MHz (17 samples)
[2025-11-25 02:31:24] 2025-11-24 17:30:52,089 | INFO     | ..............................
[2025-11-25 02:31:24] 2025-11-24 17:30:52,089 | INFO     | . Timing measurements:
[2025-11-25 02:31:24] 2025-11-24 17:30:52,089 | INFO     | . get job = 0 s
[2025-11-25 02:31:24] 2025-11-24 17:30:52,089 | INFO     | . initial setup = 32 s
[2025-11-25 02:31:24] 2025-11-24 17:30:52,089 | INFO     | . payload setup = 3 s
[2025-11-25 02:31:24] 2025-11-24 17:30:52,089 | INFO     | . stage-in = 0 s
[2025-11-25 02:31:24] 2025-11-24 17:30:52,089 | INFO     | . payload execution = 26015 s
[2025-11-25 02:31:24] 2025-11-24 17:30:52,089 | INFO     | . stage-out = 4 s
[2025-11-25 02:31:24] 2025-11-24 17:30:52,089 | INFO     | . log creation = 0 s
[2025-11-25 02:31:24] 2025-11-24 17:30:52,089 | INFO     | ..............................
[2025-11-25 02:31:24] 2025-11-24 17:30:52,182 | INFO     | 
[2025-11-25 02:31:24] 2025-11-24 17:30:52,182 | INFO     | job summary report
[2025-11-25 02:31:24] 2025-11-24 17:30:52,182 | INFO     | --------------------------------------------------
[2025-11-25 02:31:24] 2025-11-24 17:30:52,182 | INFO     | PanDA job id: 6895352846
[2025-11-25 02:31:24] 2025-11-24 17:30:52,182 | INFO     | task id: 47556137
[2025-11-25 02:31:24] 2025-11-24 17:30:52,182 | INFO     | errors: (none)
[2025-11-25 02:31:24] 2025-11-24 17:30:52,182 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 02:31:24] 2025-11-24 17:30:52,182 | INFO     | pilot state: finished 
[2025-11-25 02:31:24] 2025-11-24 17:30:52,182 | INFO     | transexitcode: 0
[2025-11-25 02:31:24] 2025-11-24 17:30:52,182 | INFO     | exeerrorcode: 0
[2025-11-25 02:31:24] 2025-11-24 17:30:52,182 | INFO     | exeerrordiag: 
[2025-11-25 02:31:24] 2025-11-24 17:30:52,182 | INFO     | exitcode: 0
[2025-11-25 02:31:24] 2025-11-24 17:30:52,182 | INFO     | exitmsg: OK
[2025-11-25 02:31:24] 2025-11-24 17:30:52,182 | INFO     | cpuconsumptiontime: 149379 s
[2025-11-25 02:31:24] 2025-11-24 17:30:52,182 | INFO     | nevents: 1000
[2025-11-25 02:31:24] 2025-11-24 17:30:52,182 | INFO     | neventsw: 0
[2025-11-25 02:31:24] 2025-11-24 17:30:52,183 | INFO     | pid: 2987793
[2025-11-25 02:31:24] 2025-11-24 17:30:52,183 | INFO     | pgrp: 2987793
[2025-11-25 02:31:24] 2025-11-24 17:30:52,183 | INFO     | corecount: 6
[2025-11-25 02:31:24] 2025-11-24 17:30:52,183 | INFO     | event service: False
[2025-11-25 02:31:24] 2025-11-24 17:30:52,183 | INFO     | sizes: {0: 2298756, 5: 2299018, 11: 2299074, 26023: 2336154, 26028: 2345939, 26031: 2345995, 26106: 2346433}
[2025-11-25 02:31:24] 2025-11-24 17:30:52,183 | INFO     | --------------------------------------------------
[2025-11-25 02:31:24] 2025-11-24 17:30:52,183 | INFO     | 
[2025-11-25 02:31:24] 2025-11-24 17:30:52,183 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-11-25 02:31:24] 2025-11-24 17:30:52,196 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 02:31:24] 2025-11-24 17:30:52,196 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 02:31:24] 2025-11-24 17:30:52,196 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 02:31:24] 2025-11-24 17:30:52,196 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 02:31:24] 2025-11-24 17:30:52,196 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 02:31:24] 2025-11-24 17:30:52,196 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 02:31:24] 2025-11-24 17:30:52,196 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 02:31:24] 2025-11-24 17:30:52,196 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 02:31:24] 2025-11-24 17:30:52,196 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 02:31:24] 2025-11-24 17:30:52,196 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 02:31:24] 2025-11-24 17:30:52,196 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 02:31:24] 2025-11-24 17:30:52,196 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 02:31:24] 2025-11-24 17:30:52,196 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 02:31:24] 2025-11-24 17:30:52,196 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 02:31:24] 2025-11-24 17:30:52,196 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 02:31:24] 2025-11-24 17:30:52,196 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 02:31:24] 2025-11-24 17:30:52,196 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 02:31:24] 2025-11-24 17:30:52,197 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 02:31:24] 2025-11-24 17:30:52,197 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 02:31:24] 2025-11-24 17:30:52,197 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 02:31:24] 2025-11-24 17:30:52,197 | INFO     | job 6895352846 has completed (purged errors)
[2025-11-25 02:31:24] 2025-11-24 17:30:52,197 | INFO     | overall cleanup function is called
[2025-11-25 02:31:24] 2025-11-24 17:30:53,205 | INFO     | --- collectZombieJob: --- 10, [2987793]
[2025-11-25 02:31:24] 2025-11-24 17:30:53,205 | INFO     | zombie collector waiting for pid 2987793
[2025-11-25 02:31:24] 2025-11-24 17:30:53,205 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 02:31:24] 2025-11-24 17:30:53,205 | INFO     | collected zombie processes
[2025-11-25 02:31:24] 2025-11-24 17:30:53,206 | INFO     | will attempt to kill all subprocesses of pid=2987793
[2025-11-25 02:31:24] 2025-11-24 17:30:53,259 | INFO     | process IDs to be killed: [2987793] (in reverse order)
[2025-11-25 02:31:24] 2025-11-24 17:30:53,286 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 02:31:24] 2025-11-24 17:30:53,286 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 02:31:24] 2025-11-24 17:30:53,288 | INFO     | did not find any defunct processes belonging to 2987793
[2025-11-25 02:31:24] 2025-11-24 17:30:53,290 | INFO     | did not find any defunct processes belonging to 2987793
[2025-11-25 02:31:24] 2025-11-24 17:30:53,291 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 02:31:24] 2025-11-24 17:30:53,291 | INFO     | ready for new job
[2025-11-25 02:31:24] 2025-11-24 17:30:53,292 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 02:31:24] 2025-11-24 17:30:53,293 | INFO     | ***************************************
[2025-11-25 02:31:24] 2025-11-24 17:30:53,293 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 02:31:24] 2025-11-24 17:30:53,293 | INFO     | ***************************************
[2025-11-25 02:31:24] 2025-11-24 17:30:53,293 | INFO     | 
[2025-11-25 02:31:24] 2025-11-24 17:30:53,294 | INFO     | architecture information:
[2025-11-25 02:31:24] 2025-11-24 17:30:53,295 | INFO     | executing command: cat /etc/os-release
[2025-11-25 02:31:24] 2025-11-24 17:30:53,304 | INFO     | cat /etc/os-release:
[2025-11-25 02:31:24] NAME="CentOS Linux"
[2025-11-25 02:31:24] VERSION="7 (Core)"
[2025-11-25 02:31:24] ID="centos"
[2025-11-25 02:31:24] ID_LIKE="rhel fedora"
[2025-11-25 02:31:24] VERSION_ID="7"
[2025-11-25 02:31:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 02:31:24] ANSI_COLOR="0;31"
[2025-11-25 02:31:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 02:31:24] HOME_URL="https://www.centos.org/"
[2025-11-25 02:31:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 02:31:24] 
[2025-11-25 02:31:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 02:31:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 02:31:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 02:31:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 02:31:24] 
[2025-11-25 02:31:24] 2025-11-24 17:30:53,304 | INFO     | ***************************************
[2025-11-25 02:31:24] 2025-11-24 17:30:53,806 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-11-25 02:31:24] 2025-11-24 17:30:53,816 | INFO     | sufficient remaining disk space (293990301696 B)
[2025-11-25 02:31:24] 2025-11-24 17:30:53,816 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 02:31:24] 2025-11-24 17:30:53,816 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 02:31:24] 2025-11-24 17:30:53,816 | INFO     | update_server=False
[2025-11-25 02:31:24] 2025-11-24 17:30:53,817 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 02:31:24] 2025-11-24 17:30:53,817 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 02:31:24] 2025-11-24 17:30:53,952 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 02:31:24] 2025-11-24 17:30:53,952 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 02:31:24] 2025-11-24 17:30:53,952 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 02:31:24] 2025-11-24 17:30:53,952 | INFO     | will abort loop
[2025-11-25 02:31:24] 2025-11-24 17:30:54,668 | INFO     | all payload control threads have been joined
[2025-11-25 02:31:24] 2025-11-24 17:30:54,822 | INFO     | [job] queue monitor thread has finished
[2025-11-25 02:31:24] 2025-11-24 17:30:54,822 | INFO     | [job] retrieve thread has finished
[2025-11-25 02:31:24] 2025-11-24 17:30:54,834 | INFO     | all data control threads have been joined
[2025-11-25 02:31:24] 2025-11-24 17:30:54,875 | INFO     | all job control threads have been joined
[2025-11-25 02:31:24] 2025-11-24 17:30:54,944 | INFO     | [payload] failed_post thread has finished
[2025-11-25 02:31:24] 2025-11-24 17:30:54,957 | INFO     | [job] job monitor thread has finished
[2025-11-25 02:31:24] 2025-11-24 17:30:55,150 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 02:31:24] 2025-11-24 17:30:55,151 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 02:31:24] 2025-11-24 17:30:55,501 | INFO     | [payload] validate_post thread has finished
[2025-11-25 02:31:24] 2025-11-24 17:30:55,673 | INFO     | [payload] control thread has finished
[2025-11-25 02:31:24] 2025-11-24 17:30:55,770 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 02:31:24] 2025-11-24 17:30:55,839 | INFO     | [data] control thread has finished
[2025-11-25 02:31:24] 2025-11-24 17:30:55,880 | INFO     | [job] control thread has finished
[2025-11-25 02:31:24] 2025-11-24 17:30:55,911 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 02:31:24] 2025-11-24 17:30:56,005 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 02:31:24] 2025-11-24 17:30:56,030 | INFO     | [job] validate thread has finished
[2025-11-25 02:31:24] 2025-11-24 17:30:56,049 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 02:31:24] 2025-11-24 17:30:56,057 | INFO     | [data] copytool_in thread has finished
[2025-11-25 02:31:24] 2025-11-24 17:30:57,156 | INFO     | [data] copytool_out thread has finished
[2025-11-25 02:31:24] 2025-11-24 17:30:59,155 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 02:31:24] 2025-11-24 17:31:17,308 | INFO     | [monitor] cgroup control has ended
[2025-11-25 02:31:24] 2025-11-24 17:31:18,442 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139746447050560)>', '<ExcThread(monitor, started 139745812276992)>']
[2025-11-25 02:31:24] 2025-11-24 17:31:23,467 | INFO     | all workflow threads have been joined
[2025-11-25 02:31:24] 2025-11-24 17:31:23,467 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 02:31:24] 2025-11-24 17:31:23,467 | INFO     | traces error code: 0
[2025-11-25 02:31:24] 2025-11-24 17:31:23,467 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 02:31:24] 2025-11-24 17:31:24,117 | INFO     | PID=2981063 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 02:31:24] 2025-11-24 17:31:24,122 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 02:31:24] 2025-11-24 17:31:24,122 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 02:31:24] 2025-11-24 17:31:24,122 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 02:31:24] 2025-11-24 17:31:24,122 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 02:31:24] 2025-11-24 17:31:24,122 | CRITICAL | thread 'MainThread' is not alive
[2025-11-25 02:31:24] 2025-11-24 17:31:24,122 | INFO     | [monitor] control thread has ended
[2025-11-25 02:31:24] 2025-11-24 17:31:24,186 [wrapper] ==== pilot stdout END ====
[2025-11-25 02:31:24] 2025-11-24 17:31:24,187 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 02:31:24] 2025-11-24 17:31:24,188 [wrapper] pilotpid: 2981063
[2025-11-25 02:31:24] 2025-11-24 17:31:24,189 [wrapper] Pilot exit status: 0
[2025-11-25 02:31:24] 2025-11-24 17:31:24,193 [wrapper] pandaids: 6895352846
[2025-11-25 02:31:24] 2025-11-24 17:31:24,202 [wrapper] cleanup supervisor_pilot 3068153 2981064
[2025-11-25 02:31:24] 2025-11-24 17:31:24,204 [wrapper] Test setup, not cleaning
[2025-11-25 02:31:24] 2025-11-24 17:31:24,205 [wrapper] apfmon messages muted
[2025-11-25 02:31:24] 2025-11-24 17:31:24,206 [wrapper] ==== wrapper stdout END ====
[2025-11-25 02:31:24] 2025-11-24 17:31:24,207 [wrapper] ==== wrapper stderr END ====
[2025-11-25 02:31:24]  *** Error codes and diagnostics ***
[2025-11-25 02:31:24]     "exeErrorCode": 0,
[2025-11-25 02:31:24]     "exeErrorDiag": "",
[2025-11-25 02:31:24]     "pilotErrorCode": 0,
[2025-11-25 02:31:24]     "pilotErrorDiag": "",
[2025-11-25 02:31:24]  *** Listing of results directory ***
[2025-11-25 02:31:24] total 1322104
[2025-11-25 02:31:24] -rw-r--r--. 1 boinc boinc    576529 Nov 23 12:47 pilot3.tar.gz
[2025-11-25 02:31:24] -rwx------. 1 boinc boinc     36292 Nov 23 13:14 runpilot2-wrapper.sh
[2025-11-25 02:31:24] -rw-r--r--. 1 boinc boinc      5112 Nov 23 13:14 queuedata.json
[2025-11-25 02:31:24] -rw-r--r--. 1 boinc boinc       100 Nov 24 19:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 02:31:24] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 19:14 run_atlas
[2025-11-25 02:31:24] -rw-r--r--. 1 boinc boinc       105 Nov 24 19:14 job.xml
[2025-11-25 02:31:24] -rw-r--r--. 1 boinc boinc      9515 Nov 24 19:14 init_data.xml
[2025-11-25 02:31:24] -rw-r--r--. 2 boinc boinc 411660559 Nov 24 19:14 EVNT.47483658._000606.pool.root.1
[2025-11-25 02:31:24] -rw-r--r--. 2 boinc boinc     15847 Nov 24 19:14 start_atlas.sh
[2025-11-25 02:31:24] drwxrwx--x. 2 boinc boinc        68 Nov 24 19:14 shared
[2025-11-25 02:31:24] -rw-r--r--. 2 boinc boinc    590100 Nov 24 19:14 input.tar.gz
[2025-11-25 02:31:24] -rw-r--r--. 1 boinc boinc         0 Nov 24 19:14 boinc_lockfile
[2025-11-25 02:31:24] -rw-r--r--. 1 boinc boinc      2785 Nov 24 19:14 pandaJob.out
[2025-11-25 02:31:24] -rw-------. 1 boinc boinc    989824 Nov 24 19:15 agis_schedconf.cvmfs.json
[2025-11-25 02:31:24] drwx------. 5 boinc boinc      4096 Nov 24 19:15 pilot3
[2025-11-25 02:31:24] -rw-r--r--. 1 boinc boinc       533 Nov 25 02:21 boinc_task_state.xml
[2025-11-25 02:31:24] -rw-------. 1 boinc boinc 928003488 Nov 25 02:29 HITS.47556137._006018.pool.root.1
[2025-11-25 02:31:24] -rw-------. 1 boinc boinc      1030 Nov 25 02:29 memory_monitor_summary.json
[2025-11-25 02:31:24] -rw-------. 1 boinc boinc   1516227 Nov 25 02:29 agis_ddmendpoints.agis.ALL.json
[2025-11-25 02:31:24] -rw-------. 1 boinc boinc   1475646 Nov 25 02:29 log.47556137._006018.job.log.tgz.1
[2025-11-25 02:31:24] -rw-------. 1 boinc boinc      8590 Nov 25 02:30 heartbeat.json
[2025-11-25 02:31:24] -rw-r--r--. 1 boinc boinc      8192 Nov 25 02:31 boinc_mmap_file
[2025-11-25 02:31:24] -rw-r--r--. 1 boinc boinc        29 Nov 25 02:31 wrapper_checkpoint.txt
[2025-11-25 02:31:24] -rw-------. 1 boinc boinc        95 Nov 25 02:31 pilot_heartbeat.json
[2025-11-25 02:31:24] -rw-------. 1 boinc boinc       817 Nov 25 02:31 pilotlog.txt
[2025-11-25 02:31:24] -rw-------. 1 boinc boinc   3659856 Nov 25 02:31 log.47556137._006018.job.log.1
[2025-11-25 02:31:24] -rw-------. 1 boinc boinc       353 Nov 25 02:31 output.list
[2025-11-25 02:31:24] -rw-r--r--. 1 boinc boinc       620 Nov 25 02:31 runtime_log
[2025-11-25 02:31:24] -rw-------. 1 boinc boinc   5150720 Nov 25 02:31 result.tar.gz
[2025-11-25 02:31:24] -rw-r--r--. 1 boinc boinc      8776 Nov 25 02:31 runtime_log.err
[2025-11-25 02:31:24] -rw-------. 1 boinc boinc       650 Nov 25 02:31 4IuMDmEgGh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmObKKDmc37yNn.diag
[2025-11-25 02:31:24] -rw-r--r--. 1 boinc boinc     20818 Nov 25 02:31 stderr.txt
[2025-11-25 02:31:24] HITS file was successfully produced:
[2025-11-25 02:31:24] -rw-------. 1 boinc boinc 928003488 Nov 25 02:29 shared/HITS.pool.root.1
[2025-11-25 02:31:24]  *** Contents of shared directory: ***
[2025-11-25 02:31:24] total 1313900
[2025-11-25 02:31:24] -rw-r--r--. 2 boinc boinc 411660559 Nov 24 19:14 ATLAS.root_0
[2025-11-25 02:31:24] -rw-r--r--. 2 boinc boinc     15847 Nov 24 19:14 start_atlas.sh
[2025-11-25 02:31:24] -rw-r--r--. 2 boinc boinc    590100 Nov 24 19:14 input.tar.gz
[2025-11-25 02:31:24] -rw-------. 1 boinc boinc 928003488 Nov 25 02:29 HITS.pool.root.1
[2025-11-25 02:31:24] -rw-------. 1 boinc boinc   5150720 Nov 25 02:31 result.tar.gz
02:31:25 (2977290): run_atlas exited; CPU time 149404.721669
02:31:25 (2977290): called boinc_finish(0)

</stderr_txt>
]]>

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