Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:29:41 (10481): wrapper (7.7.26015): starting
18:29:41 (10481): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 18:29:41] Arguments: --nthreads 12
[2025-11-23 18:29:41] Threads: 12
[2025-11-23 18:29:41] Checking for CVMFS
[2025-11-23 18:29:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 18:29:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 18:29:41] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 18:29:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 18:29:42] 2.11.2.0 2933 284023 93432 153226 0 82 14665023 20275201 1 130560 2 127256683 99.962 17072923 14641 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 18:29:42] CVMFS is ok
[2025-11-23 18:29:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 18:29:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 18:29:42] Further information can be found at the LHC@home message board.
[2025-11-23 18:29:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 18:29:42] Checking for apptainer binary...
[2025-11-23 18:29:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 18:29:42] Running /usr/bin/apptainer --version
[2025-11-23 18:29:42] apptainer version 1.3.2-1.el7
[2025-11-23 18:29:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 18:29:43] c-205-15.aglt2.org
[2025-11-23 18:29:43] apptainer works
[2025-11-23 18:29:43] Set ATHENA_PROC_NUMBER=12
[2025-11-23 18:29:43] Set ATHENA_CORE_NUMBER=12
[2025-11-23 18:29:43] Starting ATLAS job with PandaID=6895345431
[2025-11-23 18:29:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 01:43:04]  *** The last 200 lines of the pilot log: ***
[2025-11-24 01:43:04] 2025-11-24 06:42:29,398 | INFO     | time since job start (25951s) is within the limit (172800.0s)
[2025-11-24 01:43:04] 2025-11-24 06:42:30,848 | INFO     | monitor loop #1935: job 0:6895345431 is in state 'finished'
[2025-11-24 01:43:04] 2025-11-24 06:42:30,848 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:43:04] 2025-11-24 06:42:31,403 | INFO     | time since job start (25953s) is within the limit (172800.0s)
[2025-11-24 01:43:04] 2025-11-24 06:42:32,169 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 01:43:04] 2025-11-24 06:42:32,172 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1718.0
[2025-11-24 01:43:04] 2025-11-24 06:42:32,175 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895345431/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 01:43:04] 2025-11-24 06:42:32,176 | INFO     | extracted standard info from prmon json
[2025-11-24 01:43:04] 2025-11-24 06:42:32,176 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 01:43:04] 2025-11-24 06:42:32,176 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 01:43:04] 2025-11-24 06:42:32,184 | INFO     | fitting pss+swap vs Time
[2025-11-24 01:43:04] 2025-11-24 06:42:32,184 | INFO     | sum of square deviations: 23803758754.955254
[2025-11-24 01:43:04] 2025-11-24 06:42:32,188 | INFO     | sum of deviations: 338816561539.0661
[2025-11-24 01:43:04] 2025-11-24 06:42:32,188 | INFO     | mean x: 1763953559.2658823
[2025-11-24 01:43:04] 2025-11-24 06:42:32,188 | INFO     | mean y: 3443103.3976470586
[2025-11-24 01:43:04] 2025-11-24 06:42:32,189 | INFO     | intersect: -25104216817.77546
[2025-11-24 01:43:04] 2025-11-24 06:42:32,189 | INFO     | chi2: 5.334771626638494
[2025-11-24 01:43:04] 2025-11-24 06:42:32,190 | INFO     | sum of square deviations: 22973507884.59759
[2025-11-24 01:43:04] 2025-11-24 06:42:32,193 | INFO     | sum of deviations: 488207962979.3501
[2025-11-24 01:43:04] 2025-11-24 06:42:32,193 | INFO     | mean x: 1763953406.7690477
[2025-11-24 01:43:04] 2025-11-24 06:42:32,194 | INFO     | mean y: 3470510.55
[2025-11-24 01:43:04] 2025-11-24 06:42:32,194 | INFO     | intersect: -37482145697.26345
[2025-11-24 01:43:04] 2025-11-24 06:42:32,194 | INFO     | chi2: 2.7560989983564403
[2025-11-24 01:43:04] 2025-11-24 06:42:32,194 | INFO     | current chi2=2.7560989983564403 (change=48.33707623782402 %)
[2025-11-24 01:43:04] 2025-11-24 06:42:32,195 | INFO     | sum of square deviations: 22162792264.231308
[2025-11-24 01:43:04] 2025-11-24 06:42:32,198 | INFO     | sum of deviations: 535160715678.63605
[2025-11-24 01:43:04] 2025-11-24 06:42:32,199 | INFO     | mean x: 1763953254.272289
[2025-11-24 01:43:04] 2025-11-24 06:42:32,199 | INFO     | mean y: 3479306.4987951806
[2025-11-24 01:43:04] 2025-11-24 06:42:32,199 | INFO     | intersect: -42590363325.124084
[2025-11-24 01:43:04] 2025-11-24 06:42:32,199 | INFO     | chi2: 2.325218822966305
[2025-11-24 01:43:04] 2025-11-24 06:42:32,199 | INFO     | current chi2=2.325218822966305 (change=15.633697325353138 %)
[2025-11-24 01:43:04] 2025-11-24 06:42:32,199 | INFO     | right removable region: 414
[2025-11-24 01:43:04] 2025-11-24 06:42:32,200 | INFO     | sum of square deviations: 22973438954.597603
[2025-11-24 01:43:04] 2025-11-24 06:42:32,204 | INFO     | sum of deviations: 207332126481.17883
[2025-11-24 01:43:04] 2025-11-24 06:42:32,204 | INFO     | mean x: 1763953711.7690477
[2025-11-24 01:43:04] 2025-11-24 06:42:32,204 | INFO     | mean y: 3467167.3214285714
[2025-11-24 01:43:04] 2025-11-24 06:42:32,204 | INFO     | intersect: -15915972442.839931
[2025-11-24 01:43:04] 2025-11-24 06:42:32,205 | INFO     | chi2: 3.154496978972632
[2025-11-24 01:43:04] 2025-11-24 06:42:32,205 | INFO     | current chi2=3.154496978972632 (change=40.869128057496255 %)
[2025-11-24 01:43:04] 2025-11-24 06:42:32,205 | INFO     | sum of square deviations: 22162706009.31091
[2025-11-24 01:43:04] 2025-11-24 06:42:32,209 | INFO     | sum of deviations: 173155014603.94495
[2025-11-24 01:43:04] 2025-11-24 06:42:32,209 | INFO     | mean x: 1763953864.26747
[2025-11-24 01:43:04] 2025-11-24 06:42:32,209 | INFO     | mean y: 3473588.7662650603
[2025-11-24 01:43:04] 2025-11-24 06:42:32,209 | INFO     | intersect: -13778122259.664864
[2025-11-24 01:43:04] 2025-11-24 06:42:32,210 | INFO     | chi2: 3.0864817221355283
[2025-11-24 01:43:04] 2025-11-24 06:42:32,210 | INFO     | current chi2=3.0864817221355283 (change=2.156136375798812 %)
[2025-11-24 01:43:04] 2025-11-24 06:42:32,210 | INFO     | left removable region: 20
[2025-11-24 01:43:04] 2025-11-24 06:42:32,210 | INFO     | sum of square deviations: 18965689144.345234
[2025-11-24 01:43:04] 2025-11-24 06:42:32,214 | INFO     | sum of deviations: 326119429608.2844
[2025-11-24 01:43:04] 2025-11-24 06:42:32,214 | INFO     | mean x: 1763953833.7766497
[2025-11-24 01:43:04] 2025-11-24 06:42:32,214 | INFO     | mean y: 3519349.1395939086
[2025-11-24 01:43:04] 2025-11-24 06:42:32,214 | INFO     | intersect: -30328076499.9944
[2025-11-24 01:43:04] 2025-11-24 06:42:32,215 | INFO     | chi2: 0.03183433426469905
[2025-11-24 01:43:04] 2025-11-24 06:42:32,215 | INFO     | current memory leak: 17.20 B/s (using 394 data points, chi2=0.03)
[2025-11-24 01:43:04] 2025-11-24 06:42:32,215 | INFO     | could have reported an average CPU frequency of 2421 MHz (18 samples)
[2025-11-24 01:43:04] 2025-11-24 06:42:32,215 | INFO     | ..............................
[2025-11-24 01:43:04] 2025-11-24 06:42:32,215 | INFO     | . Timing measurements:
[2025-11-24 01:43:04] 2025-11-24 06:42:32,215 | INFO     | . get job = 0 s
[2025-11-24 01:43:04] 2025-11-24 06:42:32,216 | INFO     | . initial setup = 2 s
[2025-11-24 01:43:04] 2025-11-24 06:42:32,216 | INFO     | . payload setup = 7 s
[2025-11-24 01:43:04] 2025-11-24 06:42:32,216 | INFO     | . stage-in = 0 s
[2025-11-24 01:43:04] 2025-11-24 06:42:32,216 | INFO     | . payload execution = 25916 s
[2025-11-24 01:43:04] 2025-11-24 06:42:32,216 | INFO     | . stage-out = 3 s
[2025-11-24 01:43:04] 2025-11-24 06:42:32,216 | INFO     | . log creation = 0 s
[2025-11-24 01:43:04] 2025-11-24 06:42:32,216 | INFO     | ..............................
[2025-11-24 01:43:04] 2025-11-24 06:42:32,298 | INFO     | 
[2025-11-24 01:43:04] 2025-11-24 06:42:32,298 | INFO     | job summary report
[2025-11-24 01:43:04] 2025-11-24 06:42:32,298 | INFO     | --------------------------------------------------
[2025-11-24 01:43:04] 2025-11-24 06:42:32,298 | INFO     | PanDA job id: 6895345431
[2025-11-24 01:43:04] 2025-11-24 06:42:32,299 | INFO     | task id: 47556137
[2025-11-24 01:43:04] 2025-11-24 06:42:32,299 | INFO     | errors: (none)
[2025-11-24 01:43:04] 2025-11-24 06:42:32,299 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 01:43:04] 2025-11-24 06:42:32,299 | INFO     | pilot state: finished 
[2025-11-24 01:43:04] 2025-11-24 06:42:32,299 | INFO     | transexitcode: 0
[2025-11-24 01:43:04] 2025-11-24 06:42:32,299 | INFO     | exeerrorcode: 0
[2025-11-24 01:43:04] 2025-11-24 06:42:32,300 | INFO     | exeerrordiag: 
[2025-11-24 01:43:04] 2025-11-24 06:42:32,300 | INFO     | exitcode: 0
[2025-11-24 01:43:04] 2025-11-24 06:42:32,300 | INFO     | exitmsg: OK
[2025-11-24 01:43:04] 2025-11-24 06:42:32,300 | INFO     | cpuconsumptiontime: 297517 s
[2025-11-24 01:43:04] 2025-11-24 06:42:32,300 | INFO     | nevents: 1000
[2025-11-24 01:43:04] 2025-11-24 06:42:32,300 | INFO     | neventsw: 0
[2025-11-24 01:43:04] 2025-11-24 06:42:32,301 | INFO     | pid: 22465
[2025-11-24 01:43:04] 2025-11-24 06:42:32,301 | INFO     | pgrp: 22465
[2025-11-24 01:43:04] 2025-11-24 06:42:32,301 | INFO     | corecount: 12
[2025-11-24 01:43:04] 2025-11-24 06:42:32,301 | INFO     | event service: False
[2025-11-24 01:43:04] 2025-11-24 06:42:32,301 | INFO     | sizes: {0: 2298756, 5: 2299018, 11: 2299074, 25927: 2336339, 25931: 2345333, 25932: 2345389, 25937: 2345763}
[2025-11-24 01:43:04] 2025-11-24 06:42:32,301 | INFO     | --------------------------------------------------
[2025-11-24 01:43:04] 2025-11-24 06:42:32,302 | INFO     | 
[2025-11-24 01:43:04] 2025-11-24 06:42:32,302 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 01:43:04] 2025-11-24 06:42:32,328 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 01:43:04] 2025-11-24 06:42:32,328 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 01:43:04] 2025-11-24 06:42:32,328 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 01:43:04] 2025-11-24 06:42:32,328 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 01:43:04] 2025-11-24 06:42:32,328 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 01:43:04] 2025-11-24 06:42:32,329 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 01:43:04] 2025-11-24 06:42:32,329 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 01:43:04] 2025-11-24 06:42:32,329 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 01:43:04] 2025-11-24 06:42:32,329 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 01:43:04] 2025-11-24 06:42:32,329 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 01:43:04] 2025-11-24 06:42:32,329 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 01:43:04] 2025-11-24 06:42:32,330 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 01:43:04] 2025-11-24 06:42:32,330 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 01:43:04] 2025-11-24 06:42:32,330 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 01:43:04] 2025-11-24 06:42:32,330 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 01:43:04] 2025-11-24 06:42:32,330 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 01:43:04] 2025-11-24 06:42:32,331 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 01:43:04] 2025-11-24 06:42:32,331 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 01:43:04] 2025-11-24 06:42:32,331 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 01:43:04] 2025-11-24 06:42:32,331 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 01:43:04] 2025-11-24 06:42:32,331 | INFO     | job 6895345431 has completed (purged errors)
[2025-11-24 01:43:04] 2025-11-24 06:42:32,331 | INFO     | overall cleanup function is called
[2025-11-24 01:43:04] 2025-11-24 06:42:33,348 | INFO     | --- collectZombieJob: --- 10, [22465]
[2025-11-24 01:43:04] 2025-11-24 06:42:33,348 | INFO     | zombie collector waiting for pid 22465
[2025-11-24 01:43:04] 2025-11-24 06:42:33,348 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 01:43:04] 2025-11-24 06:42:33,348 | INFO     | collected zombie processes
[2025-11-24 01:43:04] 2025-11-24 06:42:33,348 | INFO     | will attempt to kill all subprocesses of pid=22465
[2025-11-24 01:43:04] 2025-11-24 06:42:33,439 | INFO     | process IDs to be killed: [22465] (in reverse order)
[2025-11-24 01:43:04] 2025-11-24 06:42:33,489 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 01:43:04] 2025-11-24 06:42:33,490 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 01:43:04] 2025-11-24 06:42:33,493 | INFO     | did not find any defunct processes belonging to 22465
[2025-11-24 01:43:04] 2025-11-24 06:42:33,496 | INFO     | did not find any defunct processes belonging to 22465
[2025-11-24 01:43:04] 2025-11-24 06:42:33,498 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 01:43:04] 2025-11-24 06:42:33,498 | INFO     | ready for new job
[2025-11-24 01:43:04] 2025-11-24 06:42:33,498 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 01:43:04] 2025-11-24 06:42:33,500 | INFO     | ***************************************
[2025-11-24 01:43:04] 2025-11-24 06:42:33,500 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 01:43:04] 2025-11-24 06:42:33,500 | INFO     | ***************************************
[2025-11-24 01:43:04] 2025-11-24 06:42:33,500 | INFO     | 
[2025-11-24 01:43:04] 2025-11-24 06:42:33,501 | INFO     | architecture information:
[2025-11-24 01:43:04] 2025-11-24 06:42:33,501 | INFO     | executing command: cat /etc/os-release
[2025-11-24 01:43:04] 2025-11-24 06:42:33,515 | INFO     | cat /etc/os-release:
[2025-11-24 01:43:04] NAME="CentOS Linux"
[2025-11-24 01:43:04] VERSION="7 (Core)"
[2025-11-24 01:43:04] ID="centos"
[2025-11-24 01:43:04] ID_LIKE="rhel fedora"
[2025-11-24 01:43:04] VERSION_ID="7"
[2025-11-24 01:43:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 01:43:04] ANSI_COLOR="0;31"
[2025-11-24 01:43:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 01:43:04] HOME_URL="https://www.centos.org/"
[2025-11-24 01:43:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 01:43:04] 
[2025-11-24 01:43:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 01:43:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 01:43:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 01:43:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 01:43:04] 
[2025-11-24 01:43:04] 2025-11-24 06:42:33,516 | INFO     | ***************************************
[2025-11-24 01:43:04] 2025-11-24 06:42:34,019 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 01:43:04] 2025-11-24 06:42:34,035 | INFO     | sufficient remaining disk space (28241297408 B)
[2025-11-24 01:43:04] 2025-11-24 06:42:34,035 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 01:43:04] 2025-11-24 06:42:34,036 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 01:43:04] 2025-11-24 06:42:34,036 | INFO     | update_server=False
[2025-11-24 01:43:04] 2025-11-24 06:42:34,036 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 01:43:04] 2025-11-24 06:42:34,036 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 01:43:04] 2025-11-24 06:42:34,289 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 01:43:04] 2025-11-24 06:42:34,320 | INFO     | all data control threads have been joined
[2025-11-24 01:43:04] 2025-11-24 06:42:34,356 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 01:43:04] 2025-11-24 06:42:34,356 | INFO     | aborting loop
[2025-11-24 01:43:04] 2025-11-24 06:42:35,039 | INFO     | [job] retrieve thread has finished
[2025-11-24 01:43:04] 2025-11-24 06:42:35,042 | INFO     | [job] queue monitor thread has finished
[2025-11-24 01:43:04] 2025-11-24 06:42:35,179 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 01:43:04] 2025-11-24 06:42:35,311 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 01:43:04] 2025-11-24 06:42:35,325 | INFO     | [data] control thread has finished
[2025-11-24 01:43:04] 2025-11-24 06:42:35,348 | INFO     | all payload control threads have been joined
[2025-11-24 01:43:04] 2025-11-24 06:42:35,362 | INFO     | [job] job monitor thread has finished
[2025-11-24 01:43:04] 2025-11-24 06:42:35,594 | INFO     | [data] copytool_in thread has finished
[2025-11-24 01:43:04] 2025-11-24 06:42:35,716 | INFO     | all job control threads have been joined
[2025-11-24 01:43:04] 2025-11-24 06:42:35,730 | INFO     | [payload] validate_post thread has finished
[2025-11-24 01:43:04] 2025-11-24 06:42:36,259 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 01:43:04] 2025-11-24 06:42:36,294 | INFO     | [data] copytool_out thread has finished
[2025-11-24 01:43:04] 2025-11-24 06:42:36,333 | INFO     | [job] validate thread has finished
[2025-11-24 01:43:04] 2025-11-24 06:42:36,354 | INFO     | [payload] control thread has finished
[2025-11-24 01:43:04] 2025-11-24 06:42:36,358 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 01:43:04] 2025-11-24 06:42:36,595 | INFO     | [payload] failed_post thread has finished
[2025-11-24 01:43:04] 2025-11-24 06:42:36,719 | INFO     | [job] control thread has finished
[2025-11-24 01:43:04] 2025-11-24 06:42:37,249 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 01:43:04] 2025-11-24 06:42:40,250 | INFO     | [monitor] cgroup control has ended
[2025-11-24 01:43:04] 2025-11-24 06:42:41,255 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 01:43:04] 2025-11-24 06:42:41,626 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140574375266112)>', '<ExcThread(monitor, started 140573776262912)>']
[2025-11-24 01:43:04] 2025-11-24 06:42:46,649 | INFO     | all workflow threads have been joined
[2025-11-24 01:43:04] 2025-11-24 06:42:46,649 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 01:43:04] 2025-11-24 06:42:46,650 | INFO     | traces error code: 0
[2025-11-24 01:43:04] 2025-11-24 06:42:46,650 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 01:43:04] 2025-11-24 06:43:04,609 | INFO     | PID=14179 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 01:43:04] 2025-11-24 06:43:04,609 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 01:43:04] 2025-11-24 06:43:04,609 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 01:43:04] 2025-11-24 06:43:04,609 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 01:43:04] 2025-11-24 06:43:04,610 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 01:43:04] 2025-11-24 06:43:04,610 | INFO     | [monitor] control thread has ended
[2025-11-24 01:43:04] 2025-11-24 06:43:04,703 [wrapper] ==== pilot stdout END ====
[2025-11-24 01:43:04] 2025-11-24 06:43:04,707 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 01:43:04] 2025-11-24 06:43:04,711 [wrapper] pilotpid: 14179
[2025-11-24 01:43:04] 2025-11-24 06:43:04,715 [wrapper] Pilot exit status: 0
[2025-11-24 01:43:04] 2025-11-24 06:43:04,729 [wrapper] pandaids: 6895345431
[2025-11-24 01:43:04] 2025-11-24 06:43:04,770 [wrapper] cleanup supervisor_pilot 13326 14180
[2025-11-24 01:43:04] 2025-11-24 06:43:04,775 [wrapper] Test setup, not cleaning
[2025-11-24 01:43:04] 2025-11-24 06:43:04,779 [wrapper] apfmon messages muted
[2025-11-24 01:43:04] 2025-11-24 06:43:04,783 [wrapper] ==== wrapper stdout END ====
[2025-11-24 01:43:04] 2025-11-24 06:43:04,786 [wrapper] ==== wrapper stderr END ====
[2025-11-24 01:43:04]  *** Error codes and diagnostics ***
[2025-11-24 01:43:04]     "exeErrorCode": 0,
[2025-11-24 01:43:04]     "exeErrorDiag": "",
[2025-11-24 01:43:04]     "pilotErrorCode": 0,
[2025-11-24 01:43:04]     "pilotErrorDiag": "",
[2025-11-24 01:43:04]  *** Listing of results directory ***
[2025-11-24 01:43:04] total 1320088
[2025-11-24 01:43:04] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 11:54 pilot3.tar.gz
[2025-11-24 01:43:04] -rwx------ 1 boincer umatlas     36292 Nov 22 12:03 runpilot2-wrapper.sh
[2025-11-24 01:43:04] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 12:03 queuedata.json
[2025-11-24 01:43:04] -rw-r--r-- 1 boincer umatlas       100 Nov 23 18:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 01:43:04] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 18:29 run_atlas
[2025-11-24 01:43:04] -rw-r--r-- 1 boincer umatlas       105 Nov 23 18:29 job.xml
[2025-11-24 01:43:04] -rw-r--r-- 2 boincer umatlas 409613046 Nov 23 18:29 EVNT.47483658._000443.pool.root.1
[2025-11-24 01:43:04] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 18:29 start_atlas.sh
[2025-11-24 01:43:04] drwxrwx--x 2 boincer umatlas      4096 Nov 23 18:29 shared
[2025-11-24 01:43:04] -rw-r--r-- 2 boincer umatlas    590094 Nov 23 18:29 input.tar.gz
[2025-11-24 01:43:04] -rw-r--r-- 1 boincer umatlas         0 Nov 23 18:29 boinc_lockfile
[2025-11-24 01:43:04] -rw-r--r-- 1 boincer umatlas      2785 Nov 23 18:29 pandaJob.out
[2025-11-24 01:43:04] -rw------- 1 boincer umatlas        57 Nov 23 18:29 setup.sh.local
[2025-11-24 01:43:04] -rw------- 1 boincer umatlas    989786 Nov 23 18:29 agis_schedconf.cvmfs.json
[2025-11-24 01:43:04] drwx------ 5 boincer umatlas      4096 Nov 23 18:29 pilot3
[2025-11-24 01:43:04] -rw-r--r-- 1 boincer umatlas       532 Nov 24 01:32 boinc_task_state.xml
[2025-11-24 01:43:04] -rw-r--r-- 1 boincer umatlas      5956 Nov 24 01:36 init_data.xml
[2025-11-24 01:43:04] -rw------- 1 boincer umatlas 926645292 Nov 24 01:41 HITS.47556137._004384.pool.root.1
[2025-11-24 01:43:04] -rw------- 1 boincer umatlas        95 Nov 24 01:42 pilot_heartbeat.json
[2025-11-24 01:43:04] -rw------- 1 boincer umatlas      1063 Nov 24 01:42 memory_monitor_summary.json
[2025-11-24 01:43:04] -rw------- 1 boincer umatlas   1526164 Nov 24 01:42 agis_ddmendpoints.agis.ALL.json
[2025-11-24 01:43:04] -rw------- 1 boincer umatlas   2169299 Nov 24 01:42 log.47556137._004384.job.log.tgz.1
[2025-11-24 01:43:04] -rw------- 1 boincer umatlas      8663 Nov 24 01:42 heartbeat.json
[2025-11-24 01:43:04] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 01:42 boinc_mmap_file
[2025-11-24 01:43:04] -rw-r--r-- 1 boincer umatlas        29 Nov 24 01:42 wrapper_checkpoint.txt
[2025-11-24 01:43:04] -rw------- 1 boincer umatlas       745 Nov 24 01:43 pilotlog.txt
[2025-11-24 01:43:04] -rw------- 1 boincer umatlas   3628539 Nov 24 01:43 log.47556137._004384.job.log.1
[2025-11-24 01:43:04] -rw------- 1 boincer umatlas       353 Nov 24 01:43 output.list
[2025-11-24 01:43:04] -rw-r--r-- 1 boincer umatlas       620 Nov 24 01:43 runtime_log
[2025-11-24 01:43:04] -rw------- 1 boincer umatlas   5816320 Nov 24 01:43 result.tar.gz
[2025-11-24 01:43:04] -rw------- 1 boincer umatlas       670 Nov 24 01:43 YbNKDm6B6g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUIKKDmdWtYCn.diag
[2025-11-24 01:43:04] -rw-r--r-- 1 boincer umatlas      9345 Nov 24 01:43 runtime_log.err
[2025-11-24 01:43:04] -rw-r--r-- 1 boincer umatlas     21307 Nov 24 01:43 stderr.txt
[2025-11-24 01:43:04] HITS file was successfully produced:
[2025-11-24 01:43:04] -rw------- 1 boincer umatlas 926645292 Nov 24 01:41 shared/HITS.pool.root.1
[2025-11-24 01:43:04]  *** Contents of shared directory: ***
[2025-11-24 01:43:04] total 1311224
[2025-11-24 01:43:04] -rw-r--r-- 2 boincer umatlas 409613046 Nov 23 18:29 ATLAS.root_0
[2025-11-24 01:43:04] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 18:29 start_atlas.sh
[2025-11-24 01:43:04] -rw-r--r-- 2 boincer umatlas    590094 Nov 23 18:29 input.tar.gz
[2025-11-24 01:43:04] -rw------- 1 boincer umatlas 926645292 Nov 24 01:41 HITS.pool.root.1
[2025-11-24 01:43:04] -rw------- 1 boincer umatlas   5816320 Nov 24 01:43 result.tar.gz
01:43:06 (10481): run_atlas exited; CPU time 291178.863948
01:43:06 (10481): called boinc_finish(0)

</stderr_txt>
]]>

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