Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:37:06 (13017): wrapper (7.7.26015): starting
17:37:06 (13017): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 17:37:06] Arguments: --nthreads 8
[2025-11-23 17:37:06] Threads: 8
[2025-11-23 17:37:06] Checking for CVMFS
[2025-11-23 17:37:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 17:37:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 17:37:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 17:37:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 17:37:06] 2.11.2.0 16446 113953 134168 153223 2 81 15919279 18432001 1885 130560 0 81317027 99.973 4743211 30086 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 17:37:06] CVMFS is ok
[2025-11-23 17:37:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 17:37:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 17:37:06] Further information can be found at the LHC@home message board.
[2025-11-23 17:37:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 17:37:06] Checking for apptainer binary...
[2025-11-23 17:37:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 17:37:06] Running /usr/bin/apptainer --version
[2025-11-23 17:37:06] apptainer version 1.3.2-1.el7
[2025-11-23 17:37:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 17:37:07] c-206-26.aglt2.org
[2025-11-23 17:37:07] apptainer works
[2025-11-23 17:37:07] Set ATHENA_PROC_NUMBER=8
[2025-11-23 17:37:07] Set ATHENA_CORE_NUMBER=8
[2025-11-23 17:37:07] Starting ATLAS job with PandaID=6895361817
[2025-11-23 17:37:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 13:02:21]  *** The last 200 lines of the pilot log: ***
[2025-11-24 13:02:21] 2025-11-24 18:01:16,836 | INFO     | monitor loop #4987: job 0:6895361817 is in state 'finished'
[2025-11-24 13:02:21] 2025-11-24 18:01:16,836 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 13:02:21] 2025-11-24 18:01:17,187 | INFO     | time since job start (69839s) is within the limit (172800.0s)
[2025-11-24 13:02:21] 2025-11-24 18:01:17,933 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 13:02:21] 2025-11-24 18:01:17,936 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2394.7083333333335
[2025-11-24 13:02:21] 2025-11-24 18:01:17,939 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895361817/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 13:02:21] 2025-11-24 18:01:17,940 | INFO     | extracted standard info from prmon json
[2025-11-24 13:02:21] 2025-11-24 18:01:17,940 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 13:02:21] 2025-11-24 18:01:17,940 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 13:02:21] 2025-11-24 18:01:17,955 | INFO     | fitting pss+swap vs Time
[2025-11-24 13:02:21] 2025-11-24 18:01:17,957 | INFO     | sum of square deviations: 465472119677.9387
[2025-11-24 13:02:21] 2025-11-24 18:01:17,988 | INFO     | sum of deviations: 2167120623407.889
[2025-11-24 13:02:21] 2025-11-24 18:01:17,988 | INFO     | mean x: 1763972357.6331878
[2025-11-24 13:02:21] 2025-11-24 18:01:17,988 | INFO     | mean y: 2870311.544978166
[2025-11-24 13:02:21] 2025-11-24 18:01:17,989 | INFO     | intersect: -8209739453.339074
[2025-11-24 13:02:21] 2025-11-24 18:01:17,990 | INFO     | chi2: 5.771493850628909
[2025-11-24 13:02:21] 2025-11-24 18:01:17,991 | INFO     | sum of square deviations: 459401026965.92505
[2025-11-24 13:02:21] 2025-11-24 18:01:18,033 | INFO     | sum of deviations: 2524635979064.723
[2025-11-24 13:02:21] 2025-11-24 18:01:18,033 | INFO     | mean x: 1763972205.1359649
[2025-11-24 13:02:21] 2025-11-24 18:01:18,034 | INFO     | mean y: 2879287.692105263
[2025-11-24 13:02:21] 2025-11-24 18:01:18,034 | INFO     | intersect: -9691020886.124256
[2025-11-24 13:02:21] 2025-11-24 18:01:18,035 | INFO     | chi2: 2.917086308418397
[2025-11-24 13:02:21] 2025-11-24 18:01:18,036 | INFO     | current chi2=2.917086308418397 (change=49.456997028585114 %)
[2025-11-24 13:02:21] 2025-11-24 18:01:18,037 | INFO     | sum of square deviations: 453382958503.89435
[2025-11-24 13:02:21] 2025-11-24 18:01:18,070 | INFO     | sum of deviations: 2665720802498.1973
[2025-11-24 13:02:21] 2025-11-24 18:01:18,070 | INFO     | mean x: 1763972052.6387665
[2025-11-24 13:02:21] 2025-11-24 18:01:18,070 | INFO     | mean y: 2882859.3955947137
[2025-11-24 13:02:21] 2025-11-24 18:01:18,070 | INFO     | intersect: -10368607527.586416
[2025-11-24 13:02:21] 2025-11-24 18:01:18,071 | INFO     | chi2: 2.3202238832307995
[2025-11-24 13:02:21] 2025-11-24 18:01:18,071 | INFO     | current chi2=2.3202238832307995 (change=20.460910719889114 %)
[2025-11-24 13:02:21] 2025-11-24 18:01:18,071 | INFO     | right removable region: 1134
[2025-11-24 13:02:21] 2025-11-24 18:01:18,073 | INFO     | sum of square deviations: 459400584715.9255
[2025-11-24 13:02:21] 2025-11-24 18:01:18,114 | INFO     | sum of deviations: 1872340713630.3792
[2025-11-24 13:02:21] 2025-11-24 18:01:18,114 | INFO     | mean x: 1763972510.1359649
[2025-11-24 13:02:21] 2025-11-24 18:01:18,114 | INFO     | mean y: 2877707.3394736843
[2025-11-24 13:02:21] 2025-11-24 18:01:18,114 | INFO     | intersect: -7186398184.624473
[2025-11-24 13:02:21] 2025-11-24 18:01:18,116 | INFO     | chi2: 3.774139804754079
[2025-11-24 13:02:21] 2025-11-24 18:01:18,116 | INFO     | current chi2=3.774139804754079 (change=34.60722817294836 %)
[2025-11-24 13:02:21] 2025-11-24 18:01:18,118 | INFO     | sum of square deviations: 453382351918.9907
[2025-11-24 13:02:21] 2025-11-24 18:01:18,160 | INFO     | sum of deviations: 1799169608766.4028
[2025-11-24 13:02:21] 2025-11-24 18:01:18,160 | INFO     | mean x: 1763972662.6352422
[2025-11-24 13:02:21] 2025-11-24 18:01:18,160 | INFO     | mean y: 2879561.0299559473
[2025-11-24 13:02:21] 2025-11-24 18:01:18,160 | INFO     | intersect: -6997141484.948352
[2025-11-24 13:02:21] 2025-11-24 18:01:18,162 | INFO     | chi2: 3.7267699054102104
[2025-11-24 13:02:21] 2025-11-24 18:01:18,162 | INFO     | current chi2=3.7267699054102104 (change=1.2551177697285933 %)
[2025-11-24 13:02:21] 2025-11-24 18:01:18,162 | INFO     | left removable region: 20
[2025-11-24 13:02:21] 2025-11-24 18:01:18,164 | INFO     | sum of square deviations: 428679904610.15454
[2025-11-24 13:02:21] 2025-11-24 18:01:18,203 | INFO     | sum of deviations: 2207511633864.501
[2025-11-24 13:02:21] 2025-11-24 18:01:18,203 | INFO     | mean x: 1763972632.1400359
[2025-11-24 13:02:21] 2025-11-24 18:01:18,203 | INFO     | mean y: 2895059.9775583483
[2025-11-24 13:02:21] 2025-11-24 18:01:18,204 | INFO     | intersect: -9080782680.430977
[2025-11-24 13:02:21] 2025-11-24 18:01:18,205 | INFO     | chi2: 0.22824206853059295
[2025-11-24 13:02:21] 2025-11-24 18:01:18,205 | INFO     | current memory leak: 5.15 B/s (using 1114 data points, chi2=0.23)
[2025-11-24 13:02:21] 2025-11-24 18:01:18,206 | INFO     | could have reported an average CPU frequency of 2627 MHz (41 samples)
[2025-11-24 13:02:21] 2025-11-24 18:01:18,207 | INFO     | ..............................
[2025-11-24 13:02:21] 2025-11-24 18:01:18,207 | INFO     | . Timing measurements:
[2025-11-24 13:02:21] 2025-11-24 18:01:18,207 | INFO     | . get job = 0 s
[2025-11-24 13:02:21] 2025-11-24 18:01:18,207 | INFO     | . initial setup = 2 s
[2025-11-24 13:02:21] 2025-11-24 18:01:18,207 | INFO     | . payload setup = 5 s
[2025-11-24 13:02:21] 2025-11-24 18:01:18,207 | INFO     | . stage-in = 0 s
[2025-11-24 13:02:21] 2025-11-24 18:01:18,207 | INFO     | . payload execution = 69801 s
[2025-11-24 13:02:21] 2025-11-24 18:01:18,207 | INFO     | . stage-out = 4 s
[2025-11-24 13:02:21] 2025-11-24 18:01:18,208 | INFO     | . log creation = 0 s
[2025-11-24 13:02:21] 2025-11-24 18:01:18,208 | INFO     | ..............................
[2025-11-24 13:02:21] 2025-11-24 18:01:18,352 | INFO     | 
[2025-11-24 13:02:21] 2025-11-24 18:01:18,352 | INFO     | job summary report
[2025-11-24 13:02:21] 2025-11-24 18:01:18,353 | INFO     | --------------------------------------------------
[2025-11-24 13:02:21] 2025-11-24 18:01:18,353 | INFO     | PanDA job id: 6895361817
[2025-11-24 13:02:21] 2025-11-24 18:01:18,353 | INFO     | task id: 47556137
[2025-11-24 13:02:21] 2025-11-24 18:01:18,353 | INFO     | errors: (none)
[2025-11-24 13:02:21] 2025-11-24 18:01:18,353 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 13:02:21] 2025-11-24 18:01:18,353 | INFO     | pilot state: finished 
[2025-11-24 13:02:21] 2025-11-24 18:01:18,354 | INFO     | transexitcode: 0
[2025-11-24 13:02:21] 2025-11-24 18:01:18,354 | INFO     | exeerrorcode: 0
[2025-11-24 13:02:21] 2025-11-24 18:01:18,354 | INFO     | exeerrordiag: 
[2025-11-24 13:02:21] 2025-11-24 18:01:18,354 | INFO     | exitcode: 0
[2025-11-24 13:02:21] 2025-11-24 18:01:18,354 | INFO     | exitmsg: OK
[2025-11-24 13:02:21] 2025-11-24 18:01:18,354 | INFO     | cpuconsumptiontime: 541790 s
[2025-11-24 13:02:21] 2025-11-24 18:01:18,355 | INFO     | nevents: 1000
[2025-11-24 13:02:21] 2025-11-24 18:01:18,355 | INFO     | neventsw: 0
[2025-11-24 13:02:21] 2025-11-24 18:01:18,355 | INFO     | pid: 26144
[2025-11-24 13:02:21] 2025-11-24 18:01:18,355 | INFO     | pgrp: 26144
[2025-11-24 13:02:21] 2025-11-24 18:01:18,355 | INFO     | corecount: 8
[2025-11-24 13:02:21] 2025-11-24 18:01:18,355 | INFO     | event service: False
[2025-11-24 13:02:21] 2025-11-24 18:01:18,356 | INFO     | sizes: {0: 2298630, 1: 2298829, 4: 2299091, 12: 2299119, 69810: 2355458, 69816: 2365243, 69819: 2365427, 69823: 2365769}
[2025-11-24 13:02:21] 2025-11-24 18:01:18,356 | INFO     | --------------------------------------------------
[2025-11-24 13:02:21] 2025-11-24 18:01:18,356 | INFO     | 
[2025-11-24 13:02:21] 2025-11-24 18:01:18,356 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-24 13:02:21] 2025-11-24 18:01:18,382 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 13:02:21] 2025-11-24 18:01:18,383 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 13:02:21] 2025-11-24 18:01:18,383 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 13:02:21] 2025-11-24 18:01:18,383 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 13:02:21] 2025-11-24 18:01:18,383 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 13:02:21] 2025-11-24 18:01:18,383 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 13:02:21] 2025-11-24 18:01:18,383 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 13:02:21] 2025-11-24 18:01:18,384 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 13:02:21] 2025-11-24 18:01:18,384 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 13:02:21] 2025-11-24 18:01:18,384 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 13:02:21] 2025-11-24 18:01:18,384 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 13:02:21] 2025-11-24 18:01:18,384 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 13:02:21] 2025-11-24 18:01:18,384 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 13:02:21] 2025-11-24 18:01:18,384 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 13:02:21] 2025-11-24 18:01:18,385 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 13:02:21] 2025-11-24 18:01:18,385 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 13:02:21] 2025-11-24 18:01:18,385 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 13:02:21] 2025-11-24 18:01:18,385 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 13:02:21] 2025-11-24 18:01:18,385 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 13:02:21] 2025-11-24 18:01:18,385 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 13:02:21] 2025-11-24 18:01:18,386 | INFO     | job 6895361817 has completed (purged errors)
[2025-11-24 13:02:21] 2025-11-24 18:01:18,386 | INFO     | overall cleanup function is called
[2025-11-24 13:02:21] 2025-11-24 18:01:19,400 | INFO     | --- collectZombieJob: --- 10, [26144]
[2025-11-24 13:02:21] 2025-11-24 18:01:19,401 | INFO     | zombie collector waiting for pid 26144
[2025-11-24 13:02:21] 2025-11-24 18:01:19,401 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 13:02:21] 2025-11-24 18:01:19,401 | INFO     | collected zombie processes
[2025-11-24 13:02:21] 2025-11-24 18:01:19,401 | INFO     | will attempt to kill all subprocesses of pid=26144
[2025-11-24 13:02:21] 2025-11-24 18:01:19,583 | INFO     | process IDs to be killed: [26144] (in reverse order)
[2025-11-24 13:02:21] 2025-11-24 18:01:19,642 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 13:02:21] 2025-11-24 18:01:19,642 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 13:02:21] 2025-11-24 18:01:19,648 | INFO     | did not find any defunct processes belonging to 26144
[2025-11-24 13:02:21] 2025-11-24 18:01:19,653 | INFO     | did not find any defunct processes belonging to 26144
[2025-11-24 13:02:21] 2025-11-24 18:01:19,655 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 13:02:21] 2025-11-24 18:01:19,655 | INFO     | ready for new job
[2025-11-24 13:02:21] 2025-11-24 18:01:19,655 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 13:02:21] 2025-11-24 18:01:19,660 | INFO     | ***************************************
[2025-11-24 13:02:21] 2025-11-24 18:01:19,660 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 13:02:21] 2025-11-24 18:01:19,660 | INFO     | ***************************************
[2025-11-24 13:02:21] 2025-11-24 18:01:19,660 | INFO     | 
[2025-11-24 13:02:21] 2025-11-24 18:01:19,662 | INFO     | architecture information:
[2025-11-24 13:02:21] 2025-11-24 18:01:19,662 | INFO     | executing command: cat /etc/os-release
[2025-11-24 13:02:21] 2025-11-24 18:01:19,676 | INFO     | cat /etc/os-release:
[2025-11-24 13:02:21] NAME="CentOS Linux"
[2025-11-24 13:02:21] VERSION="7 (Core)"
[2025-11-24 13:02:21] ID="centos"
[2025-11-24 13:02:21] ID_LIKE="rhel fedora"
[2025-11-24 13:02:21] VERSION_ID="7"
[2025-11-24 13:02:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 13:02:21] ANSI_COLOR="0;31"
[2025-11-24 13:02:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 13:02:21] HOME_URL="https://www.centos.org/"
[2025-11-24 13:02:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 13:02:21] 
[2025-11-24 13:02:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 13:02:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 13:02:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 13:02:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 13:02:21] 
[2025-11-24 13:02:21] 2025-11-24 18:01:19,677 | INFO     | ***************************************
[2025-11-24 13:02:21] 2025-11-24 18:01:20,179 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-24 13:02:21] 2025-11-24 18:01:20,193 | INFO     | sufficient remaining disk space (25590497280 B)
[2025-11-24 13:02:21] 2025-11-24 18:01:20,194 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 13:02:21] 2025-11-24 18:01:20,194 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 13:02:21] 2025-11-24 18:01:20,194 | INFO     | update_server=False
[2025-11-24 13:02:21] 2025-11-24 18:01:20,194 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 13:02:21] 2025-11-24 18:01:20,194 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 13:02:21] 2025-11-24 18:01:20,195 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 13:02:21] 2025-11-24 18:01:20,294 | INFO     | all data control threads have been joined
[2025-11-24 13:02:21] 2025-11-24 18:01:20,343 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 13:02:21] 2025-11-24 18:01:20,343 | INFO     | aborting loop
[2025-11-24 13:02:21] 2025-11-24 18:01:20,511 | INFO     | all payload control threads have been joined
[2025-11-24 13:02:21] 2025-11-24 18:01:20,630 | INFO     | all job control threads have been joined
[2025-11-24 13:02:21] 2025-11-24 18:01:20,962 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 13:02:21] 2025-11-24 18:01:21,200 | INFO     | [job] retrieve thread has finished
[2025-11-24 13:02:21] 2025-11-24 18:01:21,200 | INFO     | [job] queue monitor thread has finished
[2025-11-24 13:02:21] 2025-11-24 18:01:21,292 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 13:02:21] 2025-11-24 18:01:21,299 | INFO     | [data] control thread has finished
[2025-11-24 13:02:21] 2025-11-24 18:01:21,348 | INFO     | [job] job monitor thread has finished
[2025-11-24 13:02:21] 2025-11-24 18:01:21,461 | INFO     | [job] validate thread has finished
[2025-11-24 13:02:21] 2025-11-24 18:01:21,516 | INFO     | [payload] control thread has finished
[2025-11-24 13:02:21] 2025-11-24 18:01:21,637 | INFO     | [job] control thread has finished
[2025-11-24 13:02:21] 2025-11-24 18:01:21,776 | INFO     | [data] copytool_in thread has finished
[2025-11-24 13:02:21] 2025-11-24 18:01:21,776 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 13:02:21] 2025-11-24 18:01:21,907 | INFO     | [payload] failed_post thread has finished
[2025-11-24 13:02:21] 2025-11-24 18:01:22,200 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 13:02:21] 2025-11-24 18:01:22,209 | INFO     | [payload] validate_post thread has finished
[2025-11-24 13:02:21] 2025-11-24 18:01:22,483 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 13:02:21] 2025-11-24 18:01:22,968 | INFO     | [data] copytool_out thread has finished
[2025-11-24 13:02:21] 2025-11-24 18:01:24,201 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 13:02:21] 2025-11-24 18:01:50,439 | INFO     | PID=17049 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 13:02:21] 2025-11-24 18:01:50,439 | INFO     | .. there are 3 such processes running
[2025-11-24 13:02:21] 2025-11-24 18:01:50,440 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 13:02:21] 2025-11-24 18:01:50,440 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 13:02:21] 2025-11-24 18:01:50,440 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 13:02:21] 2025-11-24 18:02:14,272 | INFO     | [monitor] cgroup control has ended
[2025-11-24 13:02:21] 2025-11-24 18:02:15,727 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139762722563904)>', '<ExcThread(monitor, started 139761859688192)>']
[2025-11-24 13:02:21] 2025-11-24 18:02:16,576 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 13:02:21] 2025-11-24 18:02:16,577 | INFO     | [monitor] control thread has ended
[2025-11-24 13:02:21] 2025-11-24 18:02:20,737 | INFO     | all workflow threads have been joined
[2025-11-24 13:02:21] 2025-11-24 18:02:20,737 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 13:02:21] 2025-11-24 18:02:20,737 | INFO     | traces error code: 0
[2025-11-24 13:02:21] 2025-11-24 18:02:20,737 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 13:02:21] 2025-11-24 18:02:20,861 [wrapper] ==== pilot stdout END ====
[2025-11-24 13:02:21] 2025-11-24 18:02:20,863 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 13:02:21] 2025-11-24 18:02:20,871 [wrapper] pilotpid: 17049
[2025-11-24 13:02:21] 2025-11-24 18:02:20,874 [wrapper] Pilot exit status: 0
[2025-11-24 13:02:21] 2025-11-24 18:02:20,899 [wrapper] pandaids: 6895361817
[2025-11-24 13:02:21] 2025-11-24 18:02:20,942 [wrapper] cleanup supervisor_pilot  2255 17050
[2025-11-24 13:02:21] 2025-11-24 18:02:20,944 [wrapper] Test setup, not cleaning
[2025-11-24 13:02:21] 2025-11-24 18:02:20,947 [wrapper] apfmon messages muted
[2025-11-24 13:02:21] 2025-11-24 18:02:20,949 [wrapper] ==== wrapper stdout END ====
[2025-11-24 13:02:21] 2025-11-24 18:02:20,951 [wrapper] ==== wrapper stderr END ====
[2025-11-24 13:02:21]  *** Error codes and diagnostics ***
[2025-11-24 13:02:21]     "exeErrorCode": 0,
[2025-11-24 13:02:21]     "exeErrorDiag": "",
[2025-11-24 13:02:21]     "pilotErrorCode": 0,
[2025-11-24 13:02:21]     "pilotErrorDiag": "",
[2025-11-24 13:02:21]  *** Listing of results directory ***
[2025-11-24 13:02:21] total 1333652
[2025-11-24 13:02:21] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 09:16 pilot3.tar.gz
[2025-11-24 13:02:21] -rwx------ 1 boincer umatlas     36292 Nov 23 09:28 runpilot2-wrapper.sh
[2025-11-24 13:02:21] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 09:28 queuedata.json
[2025-11-24 13:02:21] -rw-r--r-- 1 boincer umatlas       100 Nov 23 17:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 13:02:21] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 17:37 run_atlas
[2025-11-24 13:02:21] -rw-r--r-- 1 boincer umatlas       105 Nov 23 17:37 job.xml
[2025-11-24 13:02:21] -rw-r--r-- 2 boincer umatlas 406682925 Nov 23 17:37 EVNT.47483658._000764.pool.root.1
[2025-11-24 13:02:21] drwxrwx--x 2 boincer umatlas      4096 Nov 23 17:37 shared
[2025-11-24 13:02:21] -rw-r--r-- 2 boincer umatlas    590099 Nov 23 17:37 input.tar.gz
[2025-11-24 13:02:21] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 17:37 start_atlas.sh
[2025-11-24 13:02:21] -rw-r--r-- 1 boincer umatlas         0 Nov 23 17:37 boinc_lockfile
[2025-11-24 13:02:21] -rw-r--r-- 1 boincer umatlas      2783 Nov 23 17:37 pandaJob.out
[2025-11-24 13:02:21] -rw------- 1 boincer umatlas        57 Nov 23 17:37 setup.sh.local
[2025-11-24 13:02:21] -rw------- 1 boincer umatlas    989786 Nov 23 17:37 agis_schedconf.cvmfs.json
[2025-11-24 13:02:21] drwx------ 5 boincer umatlas      4096 Nov 23 17:37 pilot3
[2025-11-24 13:02:21] -rw-r--r-- 1 boincer umatlas       533 Nov 24 12:47 boinc_task_state.xml
[2025-11-24 13:02:21] -rw-r--r-- 1 boincer umatlas      5954 Nov 24 12:55 init_data.xml
[2025-11-24 13:02:21] -rw------- 1 boincer umatlas 931159999 Nov 24 13:00 HITS.47556137._007591.pool.root.1
[2025-11-24 13:02:21] -rw------- 1 boincer umatlas      1067 Nov 24 13:01 memory_monitor_summary.json
[2025-11-24 13:02:21] -rw------- 1 boincer umatlas   1516227 Nov 24 13:01 agis_ddmendpoints.agis.ALL.json
[2025-11-24 13:02:21] -rw------- 1 boincer umatlas   2303298 Nov 24 13:01 log.47556137._007591.job.log.tgz.1
[2025-11-24 13:02:21] -rw------- 1 boincer umatlas      8671 Nov 24 13:01 heartbeat.json
[2025-11-24 13:02:21] -rw------- 1 boincer umatlas        95 Nov 24 13:01 pilot_heartbeat.json
[2025-11-24 13:02:21] -rw-r--r-- 1 boincer umatlas        29 Nov 24 13:02 wrapper_checkpoint.txt
[2025-11-24 13:02:21] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 13:02 boinc_mmap_file
[2025-11-24 13:02:21] -rw------- 1 boincer umatlas      4821 Nov 24 13:02 pilotlog.txt
[2025-11-24 13:02:21] -rw------- 1 boincer umatlas   9649121 Nov 24 13:02 log.47556137._007591.job.log.1
[2025-11-24 13:02:21] -rw------- 1 boincer umatlas       353 Nov 24 13:02 output.list
[2025-11-24 13:02:21] -rw-r--r-- 1 boincer umatlas       620 Nov 24 13:02 runtime_log
[2025-11-24 13:02:21] -rw------- 1 boincer umatlas  11970560 Nov 24 13:02 result.tar.gz
[2025-11-24 13:02:21] -rw------- 1 boincer umatlas       668 Nov 24 13:02 sfrLDm4FQh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUyKKDmaXMcem.diag
[2025-11-24 13:02:21] -rw-r--r-- 1 boincer umatlas      9343 Nov 24 13:02 runtime_log.err
[2025-11-24 13:02:21] -rw-r--r-- 1 boincer umatlas     21315 Nov 24 13:02 stderr.txt
[2025-11-24 13:02:21] HITS file was successfully produced:
[2025-11-24 13:02:21] -rw------- 1 boincer umatlas 931159999 Nov 24 13:00 shared/HITS.pool.root.1
[2025-11-24 13:02:21]  *** Contents of shared directory: ***
[2025-11-24 13:02:21] total 1318780
[2025-11-24 13:02:21] -rw-r--r-- 2 boincer umatlas 406682925 Nov 23 17:37 ATLAS.root_0
[2025-11-24 13:02:21] -rw-r--r-- 2 boincer umatlas    590099 Nov 23 17:37 input.tar.gz
[2025-11-24 13:02:21] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 17:37 start_atlas.sh
[2025-11-24 13:02:21] -rw------- 1 boincer umatlas 931159999 Nov 24 13:00 HITS.pool.root.1
[2025-11-24 13:02:21] -rw------- 1 boincer umatlas  11970560 Nov 24 13:02 result.tar.gz
13:02:22 (13017): run_atlas exited; CPU time 540855.691588
13:02:22 (13017): called boinc_finish(0)

</stderr_txt>
]]>

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