Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:41:58 (4159791): wrapper (7.7.26015): starting
23:41:58 (4159791): wrapper: running run_atlas (--nthreads 3)
[2025-11-23 23:41:58] Arguments: --nthreads 3
[2025-11-23 23:41:58] Threads: 3
[2025-11-23 23:41:58] Checking for CVMFS
[2025-11-23 23:41:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 23:41:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 23:41:58] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 23:41:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 23:41:59] 2.9.2.0 4055337 22 53112 153223 1 88 34912878 36864001 0 130560 0 313035 99.995 1452 7978 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-23 23:41:59] CVMFS is ok
[2025-11-23 23:41:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 23:41:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 23:41:59] Further information can be found at the LHC@home message board.
[2025-11-23 23:41:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 23:41:59] Checking for apptainer binary...
[2025-11-23 23:41:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 23:41:59] Running /usr/bin/apptainer --version
[2025-11-23 23:41:59] apptainer version 1.4.1-1.1
[2025-11-23 23:41:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 23:41:59] thA335
[2025-11-23 23:41:59] apptainer works
[2025-11-23 23:41:59] Set ATHENA_PROC_NUMBER=3
[2025-11-23 23:41:59] Set ATHENA_CORE_NUMBER=3
[2025-11-23 23:41:59] Starting ATLAS job with PandaID=6895361812
[2025-11-23 23:41:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 23:46:16]  *** The last 200 lines of the pilot log: ***
[2025-11-23 23:46:16] 2025-11-23 22:45:20,919 | INFO     | executing command: cat /etc/os-release
[2025-11-23 23:46:16] 2025-11-23 22:45:20,929 | INFO     | cat /etc/os-release:
[2025-11-23 23:46:16] NAME="CentOS Linux"
[2025-11-23 23:46:16] VERSION="7 (Core)"
[2025-11-23 23:46:16] ID="centos"
[2025-11-23 23:46:16] ID_LIKE="rhel fedora"
[2025-11-23 23:46:16] VERSION_ID="7"
[2025-11-23 23:46:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 23:46:16] ANSI_COLOR="0;31"
[2025-11-23 23:46:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 23:46:16] HOME_URL="https://www.centos.org/"
[2025-11-23 23:46:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 23:46:16] 
[2025-11-23 23:46:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 23:46:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 23:46:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 23:46:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 23:46:16] 
[2025-11-23 23:46:16] 2025-11-23 22:45:20,930 | INFO     | ***************************************
[2025-11-23 23:46:16] 2025-11-23 22:45:21,433 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-23 23:46:16] 2025-11-23 22:45:21,447 | INFO     | sufficient remaining disk space (827125137408 B)
[2025-11-23 23:46:16] 2025-11-23 22:45:21,447 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 23:46:16] 2025-11-23 22:45:21,447 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 23:46:16] 2025-11-23 22:45:21,447 | INFO     | update_server=False
[2025-11-23 23:46:16] 2025-11-23 22:45:21,447 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 23:46:16] 2025-11-23 22:45:21,447 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-23 23:46:16] 2025-11-23 22:45:21,448 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 23:46:16] 2025-11-23 22:45:21,448 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 23:46:16] 2025-11-23 22:45:21,448 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 23:46:16] 2025-11-23 22:45:21,448 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 23:46:16] 2025-11-23 22:45:21,448 | INFO     | aborting loop
[2025-11-23 23:46:16] 2025-11-23 22:45:22,243 | INFO     | all data control threads have been joined
[2025-11-23 23:46:16] 2025-11-23 22:45:22,284 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 23:46:16] 2025-11-23 22:45:22,453 | INFO     | [job] retrieve thread has finished
[2025-11-23 23:46:16] 2025-11-23 22:45:22,454 | INFO     | [job] job monitor thread has finished
[2025-11-23 23:46:16] 2025-11-23 22:45:22,487 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 23:46:16] 2025-11-23 22:45:22,586 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 23:46:16] 2025-11-23 22:45:22,842 | INFO     | all payload control threads have been joined
[2025-11-23 23:46:16] 2025-11-23 22:45:22,948 | INFO     | [data] copytool_in thread has finished
[2025-11-23 23:46:16] 2025-11-23 22:45:23,036 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 23:46:16] 2025-11-23 22:45:23,036 | INFO     | all job control threads have been joined
[2025-11-23 23:46:16] 2025-11-23 22:45:23,171 | INFO     | [payload] failed_post thread has finished
[2025-11-23 23:46:16] 2025-11-23 22:45:23,250 | INFO     | [data] control thread has finished
[2025-11-23 23:46:16] 2025-11-23 22:45:23,278 | INFO     | [payload] validate_post thread has finished
[2025-11-23 23:46:16] 2025-11-23 22:45:23,671 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 23:46:16] 2025-11-23 22:45:23,848 | INFO     | [payload] control thread has finished
[2025-11-23 23:46:16] 2025-11-23 22:45:23,856 | INFO     | [job] validate thread has finished
[2025-11-23 23:46:16] 2025-11-23 22:45:23,940 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 23:46:16] 2025-11-23 22:45:24,042 | INFO     | [job] control thread has finished
[2025-11-23 23:46:16] 2025-11-23 22:45:24,290 | INFO     | [data] copytool_out thread has finished
[2025-11-23 23:46:16] 2025-11-23 22:45:24,355 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 23:46:16] 2025-11-23 22:45:25,361 | INFO     | [job] queue monitor thread has finished
[2025-11-23 23:46:16] 2025-11-23 22:45:27,043 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 23:46:16] 2025-11-23 22:46:10,034 | INFO     | [monitor] cgroup control has ended
[2025-11-23 23:46:16] 2025-11-23 22:46:11,040 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139677601503040)>', '<ExcThread(monitor, started 139676765648640)>']
[2025-11-23 23:46:16] 2025-11-23 22:46:11,714 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 23:46:16] 2025-11-23 22:46:11,714 | INFO     | [monitor] control thread has ended
[2025-11-23 23:46:16] 2025-11-23 22:46:16,051 | INFO     | all workflow threads have been joined
[2025-11-23 23:46:16] 2025-11-23 22:46:16,051 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 23:46:16] 2025-11-23 22:46:16,052 | INFO     | traces error code: 0
[2025-11-23 23:46:16] 2025-11-23 22:46:16,052 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 23:46:16] 2025-11-23 22:46:16,100 [wrapper] ==== pilot stdout END ====
[2025-11-23 23:46:16] 2025-11-23 22:46:16,103 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 23:46:16] 2025-11-23 22:46:16,106 [wrapper] pilotpid: 4163526
[2025-11-23 23:46:16] 2025-11-23 22:46:16,108 [wrapper] Pilot exit status: 0
[2025-11-23 23:46:16] 2025-11-23 22:46:16,116 [wrapper] pandaids: 6895361812
[2025-11-23 23:46:16] 2025-11-23 22:46:16,135 [wrapper] cleanup supervisor_pilot 4163532 4163527
[2025-11-23 23:46:16] 2025-11-23 22:46:16,137 [wrapper] Test setup, not cleaning
[2025-11-23 23:46:16] 2025-11-23 22:46:16,140 [wrapper] apfmon messages muted
[2025-11-23 23:46:16] 2025-11-23 22:46:16,142 [wrapper] ==== wrapper stdout END ====
[2025-11-23 23:46:16] 2025-11-23 22:46:16,145 [wrapper] ==== wrapper stderr END ====
[2025-11-23 23:46:16]  *** Error codes and diagnostics ***
[2025-11-23 23:46:16]     "exeErrorCode": 65,
[2025-11-23 23:46:16]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-23 23:46:16]     "pilotErrorCode": 1305,
[2025-11-23 23:46:16]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-23 23:46:16]  *** Listing of results directory ***
[2025-11-23 23:46:16] total 404028
[2025-11-23 23:46:16] -rw-r--r-- 1 boinc boinc    576529 Nov 23 15:16 pilot3.tar.gz
[2025-11-23 23:46:16] -rw-r--r-- 1 boinc boinc      5112 Nov 23 15:26 queuedata.json
[2025-11-23 23:46:16] -rwx------ 1 boinc boinc     36292 Nov 23 15:27 runpilot2-wrapper.sh
[2025-11-23 23:46:16] -rw-r--r-- 1 boinc boinc       100 Nov 23 23:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 23:46:16] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 23:41 run_atlas
[2025-11-23 23:46:16] -rw-r--r-- 1 boinc boinc       105 Nov 23 23:41 job.xml
[2025-11-23 23:46:16] -rw-r--r-- 2 boinc boinc 409530342 Nov 23 23:41 EVNT.47483658._000763.pool.root.1
[2025-11-23 23:46:16] -rw-r--r-- 2 boinc boinc    590106 Nov 23 23:41 input.tar.gz
[2025-11-23 23:46:16] -rw-r--r-- 2 boinc boinc     15847 Nov 23 23:41 start_atlas.sh
[2025-11-23 23:46:16] drwxrwx--x 2 boinc boinc      4096 Nov 23 23:41 shared
[2025-11-23 23:46:16] -rw-r--r-- 1 boinc boinc         0 Nov 23 23:41 boinc_setup_complete
[2025-11-23 23:46:16] -rw-r--r-- 1 boinc boinc      6195 Nov 23 23:41 init_data.xml
[2025-11-23 23:46:16] -rw-r--r-- 1 boinc boinc         0 Nov 23 23:41 boinc_lockfile
[2025-11-23 23:46:16] -rw-r--r-- 1 boinc boinc      2785 Nov 23 23:41 pandaJob.out
[2025-11-23 23:46:16] -rw------- 1 boinc boinc    989786 Nov 23 23:42 agis_schedconf.cvmfs.json
[2025-11-23 23:46:16] -rw------- 1 boinc boinc   1526164 Nov 23 23:42 agis_ddmendpoints.agis.ALL.json
[2025-11-23 23:46:16] drwx------ 5 boinc boinc      4096 Nov 23 23:42 pilot3
[2025-11-23 23:46:16] -rw-r--r-- 1 boinc boinc       522 Nov 23 23:42 boinc_task_state.xml
[2025-11-23 23:46:16] -rw------- 1 boinc boinc       981 Nov 23 23:43 memory_monitor_summary.json
[2025-11-23 23:46:16] -rw------- 1 boinc boinc     55779 Nov 23 23:43 log.47556137._007586.job.log.tgz.1
[2025-11-23 23:46:16] -rw------- 1 boinc boinc        95 Nov 23 23:45 pilot_heartbeat.json
[2025-11-23 23:46:16] -rw------- 1 boinc boinc      8385 Nov 23 23:45 heartbeat.json
[2025-11-23 23:46:16] -rw-r--r-- 1 boinc boinc      8192 Nov 23 23:46 boinc_mmap_file
[2025-11-23 23:46:16] -rw-r--r-- 1 boinc boinc        22 Nov 23 23:46 wrapper_checkpoint.txt
[2025-11-23 23:46:16] -rw------- 1 boinc boinc      4556 Nov 23 23:46 pilotlog.txt
[2025-11-23 23:46:16] -rw------- 1 boinc boinc     91481 Nov 23 23:46 log.47556137._007586.job.log.1
[2025-11-23 23:46:16] -rw------- 1 boinc boinc       186 Nov 23 23:46 output.list
[2025-11-23 23:46:16] -rw-r--r-- 1 boinc boinc       620 Nov 23 23:46 runtime_log
[2025-11-23 23:46:16] -rw------- 1 boinc boinc    163840 Nov 23 23:46 result.tar.gz
[2025-11-23 23:46:16] -rw-r--r-- 1 boinc boinc      8744 Nov 23 23:46 runtime_log.err
[2025-11-23 23:46:16] -rw------- 1 boinc boinc       649 Nov 23 23:46 F9XLDmYEQh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPyKKDmF1ouRn.diag
[2025-11-23 23:46:16] -rw-r--r-- 1 boinc boinc      9178 Nov 23 23:46 stderr.txt
[2025-11-23 23:46:16] No HITS result produced
[2025-11-23 23:46:16]  *** Contents of shared directory: ***
[2025-11-23 23:46:16] total 400692
[2025-11-23 23:46:16] -rw-r--r-- 2 boinc boinc 409530342 Nov 23 23:41 ATLAS.root_0
[2025-11-23 23:46:16] -rw-r--r-- 2 boinc boinc    590106 Nov 23 23:41 input.tar.gz
[2025-11-23 23:46:16] -rw-r--r-- 2 boinc boinc     15847 Nov 23 23:41 start_atlas.sh
[2025-11-23 23:46:16] -rw------- 1 boinc boinc    163840 Nov 23 23:46 result.tar.gz
23:46:17 (4159791): run_atlas exited; CPU time 30.308616
23:46:17 (4159791): called boinc_finish(0)

</stderr_txt>
]]>

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