Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
02:10:13 (1241): wrapper (7.7.26015): starting
02:10:13 (1241): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 02:10:13] Arguments: --nthreads 8
[2025-11-24 02:10:13] Threads: 8
[2025-11-24 02:10:13] Checking for CVMFS
[2025-11-24 02:10:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 02:10:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 02:10:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 02:10:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 02:10:14] 2.11.0.0 8514 61954 87556 153227 1 1 2396638 4096000 0 130560 1 3794915 99.225 6393580 669 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-11-24 02:10:14] CVMFS is ok
[2025-11-24 02:10:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 02:10:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 02:10:14] Further information can be found at the LHC@home message board.
[2025-11-24 02:10:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 02:10:14] Checking for apptainer binary...
[2025-11-24 02:10:14] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-11-24 02:10:14] apptainer is not installed, using version from CVMFS
[2025-11-24 02:10:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 02:10:14] WARNING: Environment variable TMPDIR already has value [/tmp/job_10919624/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node332
[2025-11-24 02:10:14] apptainer works
[2025-11-24 02:10:14] Set ATHENA_PROC_NUMBER=8
[2025-11-24 02:10:14] Set ATHENA_CORE_NUMBER=8
[2025-11-24 02:10:14] Starting ATLAS job with PandaID=6894052123
[2025-11-24 02:10:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10919624/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 03:59:36]  *** The last 200 lines of the pilot log: ***
[2025-11-24 03:59:36] 2025-11-24 02:59:01,059 | INFO     | total number of processed events: 400 (read)
[2025-11-24 03:59:36] 2025-11-24 02:59:01,059 | INFO     | executing command: lscpu
[2025-11-24 03:59:36] 2025-11-24 02:59:01,090 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-24 03:59:36] 2025-11-24 02:59:01,244 | INFO     | time since job start (6522s) is within the limit (172800.0s)
[2025-11-24 03:59:36] 2025-11-24 02:59:02,340 | INFO     | monitor loop #489: job 0:6894052123 is in state 'finished'
[2025-11-24 03:59:36] 2025-11-24 02:59:02,340 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 03:59:36] 2025-11-24 02:59:02,771 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 03:59:36] 2025-11-24 02:59:02,775 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2869.8180312500003
[2025-11-24 03:59:36] 2025-11-24 02:59:02,780 | INFO     | using path: /tmp/job_10919624/atlas/pilot/slots/0/PanDA_Pilot-6894052123/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 03:59:36] 2025-11-24 02:59:02,780 | INFO     | extracted standard info from prmon json
[2025-11-24 03:59:36] 2025-11-24 02:59:02,780 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 03:59:36] 2025-11-24 02:59:02,780 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 03:59:36] 2025-11-24 02:59:02,781 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 03:59:36] 2025-11-24 02:59:02,781 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 03:59:36] 2025-11-24 02:59:02,782 | INFO     | fitting pss+swap vs Time
[2025-11-24 03:59:36] 2025-11-24 02:59:02,782 | INFO     | sum of square deviations: 379832238.0
[2025-11-24 03:59:36] 2025-11-24 02:59:02,782 | INFO     | sum of deviations: 31127653705.000004
[2025-11-24 03:59:36] 2025-11-24 02:59:02,782 | INFO     | mean x: 1763949899.0
[2025-11-24 03:59:36] 2025-11-24 02:59:02,782 | INFO     | mean y: 2499371.4112149533
[2025-11-24 03:59:36] 2025-11-24 02:59:02,782 | INFO     | intersect: -144555060824.52383
[2025-11-24 03:59:36] 2025-11-24 02:59:02,782 | INFO     | chi2: 4.417390608418395
[2025-11-24 03:59:36] 2025-11-24 02:59:02,782 | INFO     | sum of square deviations: 329031285.5
[2025-11-24 03:59:36] 2025-11-24 02:59:02,783 | INFO     | sum of deviations: 36255518573.5
[2025-11-24 03:59:36] 2025-11-24 02:59:02,783 | INFO     | mean x: 1763949746.5
[2025-11-24 03:59:36] 2025-11-24 02:59:02,783 | INFO     | mean y: 2513971.617647059
[2025-11-24 03:59:36] 2025-11-24 02:59:02,783 | INFO     | intersect: -194364756301.07916
[2025-11-24 03:59:36] 2025-11-24 02:59:02,783 | INFO     | chi2: 3.782366485696944
[2025-11-24 03:59:36] 2025-11-24 02:59:02,783 | INFO     | current chi2=3.782366485696944 (change=14.375548349997855 %)
[2025-11-24 03:59:36] 2025-11-24 02:59:02,783 | INFO     | right removable region: 101
[2025-11-24 03:59:36] 2025-11-24 02:59:02,783 | INFO     | sum of square deviations: 329031285.5
[2025-11-24 03:59:36] 2025-11-24 02:59:02,783 | INFO     | sum of deviations: -1454964924.0
[2025-11-24 03:59:36] 2025-11-24 02:59:02,783 | INFO     | mean x: 1763950051.5
[2025-11-24 03:59:36] 2025-11-24 02:59:02,783 | INFO     | mean y: 2596656.4901960786
[2025-11-24 03:59:36] 2025-11-24 02:59:02,784 | INFO     | intersect: 7802722558.561881
[2025-11-24 03:59:36] 2025-11-24 02:59:02,784 | INFO     | chi2: 0.753899179000446
[2025-11-24 03:59:36] 2025-11-24 02:59:02,784 | INFO     | current chi2=0.753899179000446 (change=82.93338203862454 %)
[2025-11-24 03:59:36] 2025-11-24 02:59:02,784 | INFO     | sum of square deviations: 282974608.0
[2025-11-24 03:59:36] 2025-11-24 02:59:02,784 | INFO     | sum of deviations: -4209100101.0
[2025-11-24 03:59:36] 2025-11-24 02:59:02,784 | INFO     | mean x: 1763950204.0
[2025-11-24 03:59:36] 2025-11-24 02:59:02,784 | INFO     | mean y: 2605607.9793814435
[2025-11-24 03:59:36] 2025-11-24 02:59:02,784 | INFO     | intersect: 26240447350.357098
[2025-11-24 03:59:36] 2025-11-24 02:59:02,784 | INFO     | chi2: 0.7139268023211577
[2025-11-24 03:59:36] 2025-11-24 02:59:02,784 | INFO     | current chi2=0.7139268023211577 (change=5.3020851849561 %)
[2025-11-24 03:59:36] 2025-11-24 02:59:02,784 | INFO     | left removable region: 20
[2025-11-24 03:59:36] 2025-11-24 02:59:02,784 | INFO     | sum of square deviations: 164765880.0
[2025-11-24 03:59:36] 2025-11-24 02:59:02,785 | INFO     | sum of deviations: 642091977.9999999
[2025-11-24 03:59:36] 2025-11-24 02:59:02,785 | INFO     | mean x: 1763950326.0
[2025-11-24 03:59:36] 2025-11-24 02:59:02,785 | INFO     | mean y: 2633269.061728395
[2025-11-24 03:59:36] 2025-11-24 02:59:02,785 | INFO     | intersect: -6871474124.502307
[2025-11-24 03:59:36] 2025-11-24 02:59:02,785 | INFO     | chi2: 0.0004558197407754837
[2025-11-24 03:59:36] 2025-11-24 02:59:02,785 | INFO     | current memory leak: 3.90 B/s (using 81 data points, chi2=0.00)
[2025-11-24 03:59:36] 2025-11-24 02:59:02,785 | INFO     | could have reported an average CPU frequency of 2664 MHz (7 samples)
[2025-11-24 03:59:36] 2025-11-24 02:59:02,785 | INFO     | ..............................
[2025-11-24 03:59:36] 2025-11-24 02:59:02,785 | INFO     | . Timing measurements:
[2025-11-24 03:59:36] 2025-11-24 02:59:02,785 | INFO     | . get job = 0 s
[2025-11-24 03:59:36] 2025-11-24 02:59:02,785 | INFO     | . initial setup = 1 s
[2025-11-24 03:59:36] 2025-11-24 02:59:02,785 | INFO     | . payload setup = 32 s
[2025-11-24 03:59:36] 2025-11-24 02:59:02,785 | INFO     | . stage-in = 0 s
[2025-11-24 03:59:36] 2025-11-24 02:59:02,785 | INFO     | . payload execution = 6470 s
[2025-11-24 03:59:36] 2025-11-24 02:59:02,785 | INFO     | . stage-out = 0 s
[2025-11-24 03:59:36] 2025-11-24 02:59:02,785 | INFO     | . log creation = 0 s
[2025-11-24 03:59:36] 2025-11-24 02:59:02,785 | INFO     | ..............................
[2025-11-24 03:59:36] 2025-11-24 02:59:02,833 | INFO     | 
[2025-11-24 03:59:36] 2025-11-24 02:59:02,833 | INFO     | job summary report
[2025-11-24 03:59:36] 2025-11-24 02:59:02,833 | INFO     | --------------------------------------------------
[2025-11-24 03:59:36] 2025-11-24 02:59:02,833 | INFO     | PanDA job id: 6894052123
[2025-11-24 03:59:36] 2025-11-24 02:59:02,833 | INFO     | task id: 47523659
[2025-11-24 03:59:36] 2025-11-24 02:59:02,833 | INFO     | errors: (none)
[2025-11-24 03:59:36] 2025-11-24 02:59:02,833 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 03:59:36] 2025-11-24 02:59:02,834 | INFO     | pilot state: finished 
[2025-11-24 03:59:36] 2025-11-24 02:59:02,834 | INFO     | transexitcode: 0
[2025-11-24 03:59:36] 2025-11-24 02:59:02,834 | INFO     | exeerrorcode: 0
[2025-11-24 03:59:36] 2025-11-24 02:59:02,834 | INFO     | exeerrordiag: 
[2025-11-24 03:59:36] 2025-11-24 02:59:02,834 | INFO     | exitcode: 0
[2025-11-24 03:59:36] 2025-11-24 02:59:02,834 | INFO     | exitmsg: OK
[2025-11-24 03:59:36] 2025-11-24 02:59:02,834 | INFO     | cpuconsumptiontime: 46037 s
[2025-11-24 03:59:36] 2025-11-24 02:59:02,834 | INFO     | nevents: 400
[2025-11-24 03:59:36] 2025-11-24 02:59:02,834 | INFO     | neventsw: 0
[2025-11-24 03:59:36] 2025-11-24 02:59:02,834 | INFO     | pid: 14514
[2025-11-24 03:59:36] 2025-11-24 02:59:02,834 | INFO     | pgrp: 14514
[2025-11-24 03:59:36] 2025-11-24 02:59:02,834 | INFO     | corecount: 8
[2025-11-24 03:59:36] 2025-11-24 02:59:02,834 | INFO     | event service: False
[2025-11-24 03:59:36] 2025-11-24 02:59:02,834 | INFO     | sizes: {0: 2298568, 2: 2298830, 11: 2298858, 6506: 2325969, 6508: 2335053, 6510: 2335191}
[2025-11-24 03:59:36] 2025-11-24 02:59:02,834 | INFO     | --------------------------------------------------
[2025-11-24 03:59:36] 2025-11-24 02:59:02,834 | INFO     | 
[2025-11-24 03:59:36] 2025-11-24 02:59:02,834 | INFO     | executing command: ls -lF /tmp/job_10919624/atlas/pilot/slots/0
[2025-11-24 03:59:36] 2025-11-24 02:59:02,843 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 03:59:36] 2025-11-24 02:59:02,844 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 03:59:36] 2025-11-24 02:59:02,844 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 03:59:36] 2025-11-24 02:59:02,844 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 03:59:36] 2025-11-24 02:59:02,844 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 03:59:36] 2025-11-24 02:59:02,844 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 03:59:36] 2025-11-24 02:59:02,844 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 03:59:36] 2025-11-24 02:59:02,844 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 03:59:36] 2025-11-24 02:59:02,844 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 03:59:36] 2025-11-24 02:59:02,844 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 03:59:36] 2025-11-24 02:59:02,844 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 03:59:36] 2025-11-24 02:59:02,844 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 03:59:36] 2025-11-24 02:59:02,844 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 03:59:36] 2025-11-24 02:59:02,844 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 03:59:36] 2025-11-24 02:59:02,844 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 03:59:36] 2025-11-24 02:59:02,844 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 03:59:36] 2025-11-24 02:59:02,844 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 03:59:36] 2025-11-24 02:59:02,844 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 03:59:36] 2025-11-24 02:59:02,844 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 03:59:36] 2025-11-24 02:59:02,844 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 03:59:36] 2025-11-24 02:59:02,844 | INFO     | job 6894052123 has completed (purged errors)
[2025-11-24 03:59:36] 2025-11-24 02:59:02,844 | INFO     | overall cleanup function is called
[2025-11-24 03:59:36] 2025-11-24 02:59:03,850 | INFO     | --- collectZombieJob: --- 10, [14514]
[2025-11-24 03:59:36] 2025-11-24 02:59:03,850 | INFO     | zombie collector waiting for pid 14514
[2025-11-24 03:59:36] 2025-11-24 02:59:03,850 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 03:59:36] 2025-11-24 02:59:03,850 | INFO     | collected zombie processes
[2025-11-24 03:59:36] 2025-11-24 02:59:03,850 | INFO     | will attempt to kill all subprocesses of pid=14514
[2025-11-24 03:59:36] 2025-11-24 02:59:03,961 | INFO     | process IDs to be killed: [14514] (in reverse order)
[2025-11-24 03:59:36] 2025-11-24 02:59:04,002 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 03:59:36] 2025-11-24 02:59:04,002 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 03:59:36] 2025-11-24 02:59:04,008 | INFO     | did not find any defunct processes belonging to 14514
[2025-11-24 03:59:36] 2025-11-24 02:59:04,011 | INFO     | did not find any defunct processes belonging to 14514
[2025-11-24 03:59:36] 2025-11-24 02:59:04,012 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 03:59:36] 2025-11-24 02:59:04,012 | INFO     | ready for new job
[2025-11-24 03:59:36] 2025-11-24 02:59:04,012 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 03:59:36] 2025-11-24 02:59:04,012 | INFO     | ***************************************
[2025-11-24 03:59:36] 2025-11-24 02:59:04,013 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 03:59:36] 2025-11-24 02:59:04,013 | INFO     | ***************************************
[2025-11-24 03:59:36] 2025-11-24 02:59:04,013 | INFO     | 
[2025-11-24 03:59:36] 2025-11-24 02:59:04,026 | INFO     | architecture information:
[2025-11-24 03:59:36] 2025-11-24 02:59:04,026 | INFO     | executing command: cat /etc/os-release
[2025-11-24 03:59:36] 2025-11-24 02:59:04,032 | INFO     | cat /etc/os-release:
[2025-11-24 03:59:36] NAME="CentOS Linux"
[2025-11-24 03:59:36] VERSION="7 (Core)"
[2025-11-24 03:59:36] ID="centos"
[2025-11-24 03:59:36] ID_LIKE="rhel fedora"
[2025-11-24 03:59:36] VERSION_ID="7"
[2025-11-24 03:59:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 03:59:36] ANSI_COLOR="0;31"
[2025-11-24 03:59:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 03:59:36] HOME_URL="https://www.centos.org/"
[2025-11-24 03:59:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 03:59:36] 
[2025-11-24 03:59:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 03:59:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 03:59:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 03:59:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 03:59:36] 
[2025-11-24 03:59:36] 2025-11-24 02:59:04,032 | INFO     | ***************************************
[2025-11-24 03:59:36] 2025-11-24 02:59:04,535 | INFO     | executing command: df -mP /tmp/job_10919624/atlas/pilot/slots/0
[2025-11-24 03:59:36] 2025-11-24 02:59:04,541 | INFO     | sufficient remaining disk space (222006607872 B)
[2025-11-24 03:59:36] 2025-11-24 02:59:04,541 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 03:59:36] 2025-11-24 02:59:04,541 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 03:59:36] 2025-11-24 02:59:04,541 | INFO     | update_server=False
[2025-11-24 03:59:36] 2025-11-24 02:59:04,541 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 03:59:36] 2025-11-24 02:59:04,541 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 03:59:36] 2025-11-24 02:59:04,843 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 03:59:36] 2025-11-24 02:59:04,843 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 03:59:36] 2025-11-24 02:59:04,843 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 03:59:36] 2025-11-24 02:59:04,843 | INFO     | will abort loop
[2025-11-24 03:59:36] 2025-11-24 02:59:05,446 | INFO     | all payload control threads have been joined
[2025-11-24 03:59:36] 2025-11-24 02:59:05,546 | INFO     | [job] retrieve thread has finished
[2025-11-24 03:59:36] 2025-11-24 02:59:05,546 | INFO     | [job] queue monitor thread has finished
[2025-11-24 03:59:36] 2025-11-24 02:59:05,582 | INFO     | [payload] validate_post thread has finished
[2025-11-24 03:59:36] 2025-11-24 02:59:05,631 | INFO     | all job control threads have been joined
[2025-11-24 03:59:36] 2025-11-24 02:59:05,641 | INFO     | all data control threads have been joined
[2025-11-24 03:59:36] 2025-11-24 02:59:05,713 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 03:59:36] 2025-11-24 02:59:05,790 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 03:59:36] 2025-11-24 02:59:05,799 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 03:59:36] 2025-11-24 02:59:05,830 | INFO     | [payload] failed_post thread has finished
[2025-11-24 03:59:36] 2025-11-24 02:59:05,838 | INFO     | [job] validate thread has finished
[2025-11-24 03:59:36] 2025-11-24 02:59:05,848 | INFO     | [job] job monitor thread has finished
[2025-11-24 03:59:36] 2025-11-24 02:59:06,256 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 03:59:36] 2025-11-24 02:59:06,305 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 03:59:36] 2025-11-24 02:59:06,451 | INFO     | [payload] control thread has finished
[2025-11-24 03:59:36] 2025-11-24 02:59:06,480 | INFO     | [data] copytool_in thread has finished
[2025-11-24 03:59:36] 2025-11-24 02:59:06,636 | INFO     | [job] control thread has finished
[2025-11-24 03:59:36] 2025-11-24 02:59:06,646 | INFO     | [data] control thread has finished
[2025-11-24 03:59:36] 2025-11-24 02:59:06,647 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 03:59:36] 2025-11-24 02:59:07,718 | INFO     | [data] copytool_out thread has finished
[2025-11-24 03:59:36] 2025-11-24 02:59:10,261 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 03:59:36] 2025-11-24 02:59:29,695 | INFO     | [monitor] cgroup control has ended
[2025-11-24 03:59:36] 2025-11-24 02:59:31,403 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456060802816)>']
[2025-11-24 03:59:36] 2025-11-24 02:59:34,443 | INFO     | PID=6128 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-24 03:59:36] 2025-11-24 02:59:34,444 | INFO     | .. there are 6 such processes running
[2025-11-24 03:59:36] 2025-11-24 02:59:34,444 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 03:59:36] 2025-11-24 02:59:34,444 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 03:59:36] 2025-11-24 02:59:34,444 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 03:59:36] 2025-11-24 02:59:34,444 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 03:59:36] 2025-11-24 02:59:34,444 | INFO     | [monitor] control thread has ended
[2025-11-24 03:59:36] 2025-11-24 02:59:36,428 | INFO     | all workflow threads have been joined
[2025-11-24 03:59:36] 2025-11-24 02:59:36,428 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 03:59:36] 2025-11-24 02:59:36,428 | INFO     | traces error code: 0
[2025-11-24 03:59:36] 2025-11-24 02:59:36,428 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 03:59:36] 2025-11-24 02:59:36,480 [wrapper] ==== pilot stdout END ====
[2025-11-24 03:59:36] 2025-11-24 02:59:36,482 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 03:59:36] 2025-11-24 02:59:36,483 [wrapper] pilotpid: 6128
[2025-11-24 03:59:36] 2025-11-24 02:59:36,484 [wrapper] Pilot exit status: 0
[2025-11-24 03:59:36] 2025-11-24 02:59:36,489 [wrapper] pandaids: 6894052123
[2025-11-24 03:59:36] 2025-11-24 02:59:36,514 [wrapper] cleanup supervisor_pilot 25827 6129
[2025-11-24 03:59:36] 2025-11-24 02:59:36,516 [wrapper] Test setup, not cleaning
[2025-11-24 03:59:36] 2025-11-24 02:59:36,517 [wrapper] apfmon messages muted
[2025-11-24 03:59:36] 2025-11-24 02:59:36,518 [wrapper] ==== wrapper stdout END ====
[2025-11-24 03:59:36] 2025-11-24 02:59:36,519 [wrapper] ==== wrapper stderr END ====
[2025-11-24 03:59:36]  *** Error codes and diagnostics ***
[2025-11-24 03:59:36]     "exeErrorCode": 0,
[2025-11-24 03:59:36]     "exeErrorDiag": "",
[2025-11-24 03:59:36]     "pilotErrorCode": 0,
[2025-11-24 03:59:36]     "pilotErrorDiag": "",
[2025-11-24 03:59:36]  *** Listing of results directory ***
[2025-11-24 03:59:36] total 608360
[2025-11-24 03:59:36] -rw------- 1 mf493845 unix-user    576529 Nov 22 17:22 pilot3.tar.gz
[2025-11-24 03:59:36] -rwx------ 1 mf493845 unix-user     36292 Nov 22 17:35 runpilot2-wrapper.sh
[2025-11-24 03:59:36] -rw------- 1 mf493845 unix-user      5112 Nov 22 17:35 queuedata.json
[2025-11-24 03:59:36] -rw------- 1 mf493845 unix-user       100 Nov 24 00:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 03:59:36] -rwxr-xr-x 1 mf493845 unix-user      7986 Nov 24 00:54 run_atlas
[2025-11-24 03:59:36] -rw------- 1 mf493845 unix-user       105 Nov 24 00:54 job.xml
[2025-11-24 03:59:36] -rw-r--r-- 2 mf493845 unix-user 299009041 Nov 24 02:10 EVNT.47523657._000004.pool.root.1
[2025-11-24 03:59:36] -rw-r--r-- 2 mf493845 unix-user     15847 Nov 24 02:10 start_atlas.sh
[2025-11-24 03:59:36] drwxrwx--x 2 mf493845 unix-user       100 Nov 24 02:10 shared
[2025-11-24 03:59:36] -rw-r--r-- 2 mf493845 unix-user    589942 Nov 24 02:10 input.tar.gz
[2025-11-24 03:59:36] -rw------- 1 mf493845 unix-user      6394 Nov 24 02:10 init_data.xml
[2025-11-24 03:59:36] -rw------- 1 mf493845 unix-user         0 Nov 24 02:10 boinc_setup_complete
[2025-11-24 03:59:36] -rw------- 1 mf493845 unix-user      8192 Nov 24 02:10 boinc_mmap_file
[2025-11-24 03:59:36] -rw------- 1 mf493845 unix-user         0 Nov 24 02:10 boinc_lockfile
[2025-11-24 03:59:36] -rw------- 1 mf493845 unix-user      2613 Nov 24 02:10 pandaJob.out
[2025-11-24 03:59:36] -rw------- 1 mf493845 unix-user    989786 Nov 24 02:10 agis_schedconf.cvmfs.json
[2025-11-24 03:59:36] -rw------- 1 mf493845 unix-user   1526164 Nov 24 02:10 agis_ddmendpoints.agis.ALL.json
[2025-11-24 03:59:36] drwx------ 5 mf493845 unix-user       440 Nov 24 02:10 pilot3
[2025-11-24 03:59:36] -rw------- 1 mf493845 unix-user 317437688 Nov 24 03:58 HITS.47523659._000097.pool.root.1
[2025-11-24 03:59:36] -rw------- 1 mf493845 unix-user        95 Nov 24 03:58 pilot_heartbeat.json
[2025-11-24 03:59:36] -rw------- 1 mf493845 unix-user      1017 Nov 24 03:58 memory_monitor_summary.json
[2025-11-24 03:59:36] -rw------- 1 mf493845 unix-user    363873 Nov 24 03:59 log.47523659._000097.job.log.tgz.1
[2025-11-24 03:59:36] -rw------- 1 mf493845 unix-user      7759 Nov 24 03:59 heartbeat.json
[2025-11-24 03:59:36] -rw------- 1 mf493845 unix-user      5020 Nov 24 03:59 pilotlog.txt
[2025-11-24 03:59:36] -rw------- 1 mf493845 unix-user    950189 Nov 24 03:59 log.47523659._000097.job.log.1
[2025-11-24 03:59:36] -rw------- 1 mf493845 unix-user       357 Nov 24 03:59 output.list
[2025-11-24 03:59:36] -rw------- 1 mf493845 unix-user       620 Nov 24 03:59 runtime_log
[2025-11-24 03:59:36] -rw------- 1 mf493845 unix-user   1331200 Nov 24 03:59 result.tar.gz
[2025-11-24 03:59:36] -rw------- 1 mf493845 unix-user      9220 Nov 24 03:59 runtime_log.err
[2025-11-24 03:59:36] -rw------- 1 mf493845 unix-user       646 Nov 24 03:59 CaQMDmxk5g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxGKKDmmBmoNo.diag
[2025-11-24 03:59:36] -rw------- 1 mf493845 unix-user     21854 Nov 24 03:59 stderr.txt
[2025-11-24 03:59:36] HITS file was successfully produced:
[2025-11-24 03:59:36] -rw------- 1 mf493845 unix-user 317437688 Nov 24 03:58 shared/HITS.pool.root.1
[2025-11-24 03:59:36]  *** Contents of shared directory: ***
[2025-11-24 03:59:36] total 603900
[2025-11-24 03:59:36] -rw-r--r-- 2 mf493845 unix-user 299009041 Nov 24 02:10 ATLAS.root_0
[2025-11-24 03:59:36] -rw-r--r-- 2 mf493845 unix-user     15847 Nov 24 02:10 start_atlas.sh
[2025-11-24 03:59:36] -rw-r--r-- 2 mf493845 unix-user    589942 Nov 24 02:10 input.tar.gz
[2025-11-24 03:59:36] -rw------- 1 mf493845 unix-user 317437688 Nov 24 03:58 HITS.pool.root.1
[2025-11-24 03:59:36] -rw------- 1 mf493845 unix-user   1331200 Nov 24 03:59 result.tar.gz
03:59:37 (1241): run_atlas exited; CPU time 46131.092139
03:59:37 (1241): called boinc_finish(0)

</stderr_txt>
]]>

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