Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:38:08 (2094429): wrapper (7.7.26015): starting
16:38:08 (2094429): wrapper: running run_atlas (--nthreads 3)
[2025-11-26 16:38:08] Arguments: --nthreads 3
[2025-11-26 16:38:08] Threads: 3
[2025-11-26 16:38:08] Checking for CVMFS
[2025-11-26 16:38:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 16:38:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 16:38:08] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 16:39:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 16:39:24] 2.9.2.0 528461 11384 95364 153326 2 81 35138711 36864001 0 130560 1 4230395 99.934 572876 877 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 16:39:24] CVMFS is ok
[2025-11-26 16:39:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 16:39:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 16:39:24] Further information can be found at the LHC@home message board.
[2025-11-26 16:39:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 16:39:24] Checking for apptainer binary...
[2025-11-26 16:39:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 16:39:24] Running /usr/bin/apptainer --version
[2025-11-26 16:39:24] apptainer version 1.4.1-1.1
[2025-11-26 16:39:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 16:39:24] magicA246a
[2025-11-26 16:39:24] apptainer works
[2025-11-26 16:39:24] Set ATHENA_PROC_NUMBER=3
[2025-11-26 16:39:24] Set ATHENA_CORE_NUMBER=3
[2025-11-26 16:39:24] Starting ATLAS job with PandaID=6894052131
[2025-11-26 16:39:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 19:47:49]  *** The last 200 lines of the pilot log: ***
[2025-11-26 19:47:49] ID_LIKE="rhel fedora"
[2025-11-26 19:47:49] VERSION_ID="7"
[2025-11-26 19:47:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 19:47:49] ANSI_COLOR="0;31"
[2025-11-26 19:47:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 19:47:49] HOME_URL="https://www.centos.org/"
[2025-11-26 19:47:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 19:47:49] 
[2025-11-26 19:47:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 19:47:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 19:47:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 19:47:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 19:47:49] 
[2025-11-26 19:47:49] 2025-11-26 18:47:02,416 | INFO     | ***************************************
[2025-11-26 19:47:49] 2025-11-26 18:47:02,919 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-26 19:47:49] 2025-11-26 18:47:02,931 | INFO     | sufficient remaining disk space (267636441088 B)
[2025-11-26 19:47:49] 2025-11-26 18:47:02,931 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 19:47:49] 2025-11-26 18:47:02,932 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 19:47:49] 2025-11-26 18:47:02,932 | INFO     | update_server=False
[2025-11-26 19:47:49] 2025-11-26 18:47:02,932 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 19:47:49] 2025-11-26 18:47:03,005 | INFO     | all data control threads have been joined
[2025-11-26 19:47:49] 2025-11-26 18:47:03,868 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 19:47:49] 2025-11-26 18:47:03,868 | INFO     | aborting loop
[2025-11-26 19:47:49] 2025-11-26 18:47:03,914 | INFO     | all job control threads have been joined
[2025-11-26 19:47:49] 2025-11-26 18:47:03,935 | INFO     | [job] retrieve thread has finished
[2025-11-26 19:47:49] 2025-11-26 18:47:04,011 | INFO     | [data] control thread has finished
[2025-11-26 19:47:49] 2025-11-26 18:47:04,169 | INFO     | [payload] failed_post thread has finished
[2025-11-26 19:47:49] 2025-11-26 18:47:04,176 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 19:47:49] 2025-11-26 18:47:04,295 | INFO     | all payload control threads have been joined
[2025-11-26 19:47:49] 2025-11-26 18:47:04,445 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 19:47:49] 2025-11-26 18:47:04,820 | INFO     | [data] copytool_in thread has finished
[2025-11-26 19:47:49] 2025-11-26 18:47:04,874 | INFO     | [job] job monitor thread has finished
[2025-11-26 19:47:49] 2025-11-26 18:47:04,919 | INFO     | [job] control thread has finished
[2025-11-26 19:47:49] 2025-11-26 18:47:05,188 | INFO     | [payload] validate_post thread has finished
[2025-11-26 19:47:49] 2025-11-26 18:47:05,300 | INFO     | [payload] control thread has finished
[2025-11-26 19:47:49] 2025-11-26 18:47:05,397 | INFO     | [job] validate thread has finished
[2025-11-26 19:47:49] 2025-11-26 18:47:05,402 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 19:47:49] 2025-11-26 18:47:05,403 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 19:47:49] 2025-11-26 18:47:05,900 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 19:47:49] 2025-11-26 18:47:06,156 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 19:47:49] 2025-11-26 18:47:06,182 | INFO     | [data] copytool_out thread has finished
[2025-11-26 19:47:49] 2025-11-26 18:47:06,906 | INFO     | [job] queue monitor thread has finished
[2025-11-26 19:47:49] 2025-11-26 18:47:10,163 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 19:47:49] 2025-11-26 18:47:13,607 | INFO     | job.realtimelogging is not enabled
[2025-11-26 19:47:49] 2025-11-26 18:47:14,612 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 19:47:49] 2025-11-26 18:47:32,983 | INFO     | PID=2098185 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 19:47:49] 2025-11-26 18:47:32,983 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 19:47:49] 2025-11-26 18:47:32,983 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 19:47:49] 2025-11-26 18:47:32,983 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 19:47:49] 2025-11-26 18:47:42,931 | INFO     | [monitor] cgroup control has ended
[2025-11-26 19:47:49] 2025-11-26 18:47:44,331 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139726923622208)>', '<ExcThread(monitor, started 139726642185984)>']
[2025-11-26 19:47:49] 2025-11-26 18:47:45,045 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 19:47:49] 2025-11-26 18:47:45,046 | INFO     | [monitor] control thread has ended
[2025-11-26 19:47:49] 2025-11-26 18:47:49,357 | INFO     | all workflow threads have been joined
[2025-11-26 19:47:49] 2025-11-26 18:47:49,357 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 19:47:49] 2025-11-26 18:47:49,357 | INFO     | traces error code: 0
[2025-11-26 19:47:49] 2025-11-26 18:47:49,358 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 19:47:49] 2025-11-26 18:47:49,410 [wrapper] ==== pilot stdout END ====
[2025-11-26 19:47:49] 2025-11-26 18:47:49,412 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 19:47:49] 2025-11-26 18:47:49,415 [wrapper] pilotpid: 2098185
[2025-11-26 19:47:49] 2025-11-26 18:47:49,417 [wrapper] Pilot exit status: 0
[2025-11-26 19:47:49] 2025-11-26 18:47:49,424 [wrapper] pandaids: 6894052131
[2025-11-26 19:47:49] 2025-11-26 18:47:49,440 [wrapper] cleanup supervisor_pilot 2125713 2098186
[2025-11-26 19:47:49] 2025-11-26 18:47:49,443 [wrapper] Test setup, not cleaning
[2025-11-26 19:47:49] 2025-11-26 18:47:49,445 [wrapper] apfmon messages muted
[2025-11-26 19:47:49] 2025-11-26 18:47:49,447 [wrapper] ==== wrapper stdout END ====
[2025-11-26 19:47:49] 2025-11-26 18:47:49,449 [wrapper] ==== wrapper stderr END ====
[2025-11-26 19:47:49]  *** Error codes and diagnostics ***
[2025-11-26 19:47:49]     "exeErrorCode": 0,
[2025-11-26 19:47:49]     "exeErrorDiag": "",
[2025-11-26 19:47:49]     "pilotErrorCode": 0,
[2025-11-26 19:47:49]     "pilotErrorDiag": "",
[2025-11-26 19:47:49]  *** Listing of results directory ***
[2025-11-26 19:47:49] total 621820
[2025-11-26 19:47:49] -rw-r--r-- 1 boinc boinc    576529 Nov 22 17:22 pilot3.tar.gz
[2025-11-26 19:47:49] -rw-r--r-- 1 boinc boinc      5112 Nov 22 17:39 queuedata.json
[2025-11-26 19:47:49] -rwx------ 1 boinc boinc     36292 Nov 22 17:40 runpilot2-wrapper.sh
[2025-11-26 19:47:49] -rw-r--r-- 1 boinc boinc       100 Nov 26 16:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 19:47:49] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 16:38 run_atlas
[2025-11-26 19:47:49] -rw-r--r-- 1 boinc boinc       105 Nov 26 16:38 job.xml
[2025-11-26 19:47:49] -rw-r--r-- 2 boinc boinc 302121022 Nov 26 16:38 EVNT.47523657._000005.pool.root.1
[2025-11-26 19:47:49] drwxrwx--x 2 boinc boinc      4096 Nov 26 16:38 shared
[2025-11-26 19:47:49] -rw-r--r-- 2 boinc boinc    589948 Nov 26 16:38 input.tar.gz
[2025-11-26 19:47:49] -rw-r--r-- 2 boinc boinc     15847 Nov 26 16:38 start_atlas.sh
[2025-11-26 19:47:49] -rw-r--r-- 1 boinc boinc         0 Nov 26 16:38 boinc_setup_complete
[2025-11-26 19:47:49] -rw-r--r-- 1 boinc boinc      6448 Nov 26 16:38 init_data.xml
[2025-11-26 19:47:49] -rw-r--r-- 1 boinc boinc         0 Nov 26 16:38 boinc_lockfile
[2025-11-26 19:47:49] -rw-r--r-- 1 boinc boinc      2614 Nov 26 16:39 pandaJob.out
[2025-11-26 19:47:49] -rw------- 1 boinc boinc    991855 Nov 26 16:39 agis_schedconf.cvmfs.json
[2025-11-26 19:47:49] drwx------ 5 boinc boinc      4096 Nov 26 16:39 pilot3
[2025-11-26 19:47:49] -rw-r--r-- 1 boinc boinc       530 Nov 26 19:46 boinc_task_state.xml
[2025-11-26 19:47:49] -rw------- 1 boinc boinc 326846211 Nov 26 19:46 HITS.47523659._000105.pool.root.1
[2025-11-26 19:47:49] -rw------- 1 boinc boinc      1028 Nov 26 19:46 memory_monitor_summary.json
[2025-11-26 19:47:49] -rw------- 1 boinc boinc   1516240 Nov 26 19:46 agis_ddmendpoints.agis.ALL.json
[2025-11-26 19:47:49] -rw------- 1 boinc boinc    335814 Nov 26 19:46 log.47523659._000105.job.log.tgz.1
[2025-11-26 19:47:49] -rw------- 1 boinc boinc      7767 Nov 26 19:47 heartbeat.json
[2025-11-26 19:47:49] -rw-r--r-- 1 boinc boinc      8192 Nov 26 19:47 boinc_mmap_file
[2025-11-26 19:47:49] -rw-r--r-- 1 boinc boinc        28 Nov 26 19:47 wrapper_checkpoint.txt
[2025-11-26 19:47:49] -rw------- 1 boinc boinc        95 Nov 26 19:47 pilot_heartbeat.json
[2025-11-26 19:47:49] -rw------- 1 boinc boinc      4824 Nov 26 19:47 pilotlog.txt
[2025-11-26 19:47:49] -rw------- 1 boinc boinc   1599641 Nov 26 19:47 log.47523659._000105.job.log.1
[2025-11-26 19:47:49] -rw------- 1 boinc boinc       357 Nov 26 19:47 output.list
[2025-11-26 19:47:49] -rw-r--r-- 1 boinc boinc       620 Nov 26 19:47 runtime_log
[2025-11-26 19:47:49] -rw------- 1 boinc boinc   1955840 Nov 26 19:47 result.tar.gz
[2025-11-26 19:47:49] -rw-r--r-- 1 boinc boinc      8918 Nov 26 19:47 runtime_log.err
[2025-11-26 19:47:49] -rw------- 1 boinc boinc       665 Nov 26 19:47 QxdNDmGq5g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUHKKDmNKTJpn.diag
[2025-11-26 19:47:49] -rw-r--r-- 1 boinc boinc      8687 Nov 26 19:47 stderr.txt
[2025-11-26 19:47:49] HITS file was successfully produced:
[2025-11-26 19:47:49] -rw------- 1 boinc boinc 326846211 Nov 26 19:46 shared/HITS.pool.root.1
[2025-11-26 19:47:49]  *** Contents of shared directory: ***
[2025-11-26 19:47:49] total 616748
[2025-11-26 19:47:49] -rw-r--r-- 2 boinc boinc 302121022 Nov 26 16:38 ATLAS.root_0
[2025-11-26 19:47:49] -rw-r--r-- 2 boinc boinc    589948 Nov 26 16:38 input.tar.gz
[2025-11-26 19:47:49] -rw-r--r-- 2 boinc boinc     15847 Nov 26 16:38 start_atlas.sh
[2025-11-26 19:47:49] -rw------- 1 boinc boinc 326846211 Nov 26 19:46 HITS.pool.root.1
[2025-11-26 19:47:49] -rw------- 1 boinc boinc   1955840 Nov 26 19:47 result.tar.gz
19:47:50 (2094429): run_atlas exited; CPU time 32192.254648
19:47:50 (2094429): called boinc_finish(0)

</stderr_txt>
]]>

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