Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:35:08 (15618): wrapper (7.7.26015): starting
17:35:08 (15618): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 17:35:08] Arguments: --nthreads 8
[2025-11-23 17:35:08] Threads: 8
[2025-11-23 17:35:08] Checking for CVMFS
[2025-11-23 17:35:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 17:35:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 17:35:08] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 17:35:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 17:35:09] 2.11.2.0 8814 113948 127736 153223 0 90 11339558 18432000 783 130560 0 81551723 99.972 4872899 31581 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 17:35:09] CVMFS is ok
[2025-11-23 17:35:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 17:35:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 17:35:09] Further information can be found at the LHC@home message board.
[2025-11-23 17:35:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 17:35:09] Checking for apptainer binary...
[2025-11-23 17:35:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 17:35:09] Running /usr/bin/apptainer --version
[2025-11-23 17:35:09] apptainer version 1.3.2-1.el7
[2025-11-23 17:35:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 17:35:10] c-206-19.aglt2.org
[2025-11-23 17:35:10] apptainer works
[2025-11-23 17:35:10] Set ATHENA_PROC_NUMBER=8
[2025-11-23 17:35:10] Set ATHENA_CORE_NUMBER=8
[2025-11-23 17:35:10] Starting ATLAS job with PandaID=6895352205
[2025-11-23 17:35:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 12:48:25]  *** The last 200 lines of the pilot log: ***
[2025-11-24 12:48:25] 2025-11-24 17:47:18,985 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 12:48:25] 2025-11-24 17:47:19,224 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 12:48:25] 2025-11-24 17:47:19,228 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2222.7916666666665
[2025-11-24 12:48:25] 2025-11-24 17:47:19,231 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895352205/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 12:48:25] 2025-11-24 17:47:19,231 | INFO     | extracted standard info from prmon json
[2025-11-24 12:48:25] 2025-11-24 17:47:19,231 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 12:48:25] 2025-11-24 17:47:19,231 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 12:48:25] 2025-11-24 17:47:19,247 | INFO     | fitting pss+swap vs Time
[2025-11-24 12:48:25] 2025-11-24 17:47:19,248 | INFO     | sum of square deviations: 450990424318.33734
[2025-11-24 12:48:25] 2025-11-24 17:47:19,270 | INFO     | sum of deviations: 2087144356558.578
[2025-11-24 12:48:25] 2025-11-24 17:47:19,270 | INFO     | mean x: 1763971874.5781112
[2025-11-24 12:48:25] 2025-11-24 17:47:19,271 | INFO     | mean y: 2861040.829655781
[2025-11-24 12:48:25] 2025-11-24 17:47:19,271 | INFO     | intersect: -8160646973.156492
[2025-11-24 12:48:25] 2025-11-24 17:47:19,272 | INFO     | chi2: 6.168545695428428
[2025-11-24 12:48:25] 2025-11-24 17:47:19,273 | INFO     | sum of square deviations: 445046177751.65875
[2025-11-24 12:48:25] 2025-11-24 17:47:19,295 | INFO     | sum of deviations: 2440692567439.3867
[2025-11-24 12:48:25] 2025-11-24 17:47:19,295 | INFO     | mean x: 1763971722.0806737
[2025-11-24 12:48:25] 2025-11-24 17:47:19,295 | INFO     | mean y: 2870106.545212766
[2025-11-24 12:48:25] 2025-11-24 17:47:19,295 | INFO     | intersect: -9670985970.605444
[2025-11-24 12:48:25] 2025-11-24 17:47:19,296 | INFO     | chi2: 3.2812678561057878
[2025-11-24 12:48:25] 2025-11-24 17:47:19,296 | INFO     | current chi2=3.2812678561057878 (change=46.806459445739875 %)
[2025-11-24 12:48:25] 2025-11-24 17:47:19,297 | INFO     | sum of square deviations: 439154397284.9653
[2025-11-24 12:48:25] 2025-11-24 17:47:19,320 | INFO     | sum of deviations: 2615603003810.2817
[2025-11-24 12:48:25] 2025-11-24 17:47:19,320 | INFO     | mean x: 1763971569.583259
[2025-11-24 12:48:25] 2025-11-24 17:47:19,320 | INFO     | mean y: 2874632.3446126445
[2025-11-24 12:48:25] 2025-11-24 17:47:19,320 | INFO     | intersect: -10503337680.597355
[2025-11-24 12:48:25] 2025-11-24 17:47:19,321 | INFO     | chi2: 2.4815003237790196
[2025-11-24 12:48:25] 2025-11-24 17:47:19,321 | INFO     | current chi2=2.4815003237790196 (change=24.37373501339001 %)
[2025-11-24 12:48:25] 2025-11-24 17:47:19,321 | INFO     | right removable region: 1122
[2025-11-24 12:48:25] 2025-11-24 17:47:19,322 | INFO     | sum of square deviations: 445045778201.6588
[2025-11-24 12:48:25] 2025-11-24 17:47:19,345 | INFO     | sum of deviations: 1815289395480.1736
[2025-11-24 12:48:25] 2025-11-24 17:47:19,345 | INFO     | mean x: 1763972027.0806737
[2025-11-24 12:48:25] 2025-11-24 17:47:19,345 | INFO     | mean y: 2868005.5585106383
[2025-11-24 12:48:25] 2025-11-24 17:47:19,345 | INFO     | intersect: -7192166463.979296
[2025-11-24 12:48:25] 2025-11-24 17:47:19,346 | INFO     | chi2: 4.297896232594909
[2025-11-24 12:48:25] 2025-11-24 17:47:19,346 | INFO     | current chi2=4.297896232594909 (change=30.32561571554663 %)
[2025-11-24 12:48:25] 2025-11-24 17:47:19,347 | INFO     | sum of square deviations: 439153804731.4567
[2025-11-24 12:48:25] 2025-11-24 17:47:19,369 | INFO     | sum of deviations: 1722629111746.4155
[2025-11-24 12:48:25] 2025-11-24 17:47:19,370 | INFO     | mean x: 1763972179.5805876
[2025-11-24 12:48:25] 2025-11-24 17:47:19,370 | INFO     | mean y: 2870403.431878896
[2025-11-24 12:48:25] 2025-11-24 17:47:19,370 | INFO     | intersect: -6916504531.084395
[2025-11-24 12:48:25] 2025-11-24 17:47:19,371 | INFO     | chi2: 4.198760604176587
[2025-11-24 12:48:25] 2025-11-24 17:47:19,371 | INFO     | current chi2=4.198760604176587 (change=2.306608234663401 %)
[2025-11-24 12:48:25] 2025-11-24 17:47:19,371 | INFO     | left removable region: 20
[2025-11-24 12:48:25] 2025-11-24 17:47:19,372 | INFO     | sum of square deviations: 414975616310.81036
[2025-11-24 12:48:25] 2025-11-24 17:47:19,393 | INFO     | sum of deviations: 2134116618158.518
[2025-11-24 12:48:25] 2025-11-24 17:47:19,393 | INFO     | mean x: 1763972149.086207
[2025-11-24 12:48:25] 2025-11-24 17:47:19,393 | INFO     | mean y: 2888369.7313974593
[2025-11-24 12:48:25] 2025-11-24 17:47:19,393 | INFO     | intersect: -9068782661.932545
[2025-11-24 12:48:25] 2025-11-24 17:47:19,394 | INFO     | chi2: 0.3686068910293091
[2025-11-24 12:48:25] 2025-11-24 17:47:19,395 | INFO     | current memory leak: 5.14 B/s (using 1102 data points, chi2=0.37)
[2025-11-24 12:48:25] 2025-11-24 17:47:19,395 | INFO     | could have reported an average CPU frequency of 2604 MHz (41 samples)
[2025-11-24 12:48:25] 2025-11-24 17:47:19,396 | INFO     | ..............................
[2025-11-24 12:48:25] 2025-11-24 17:47:19,396 | INFO     | . Timing measurements:
[2025-11-24 12:48:25] 2025-11-24 17:47:19,396 | INFO     | . get job = 0 s
[2025-11-24 12:48:25] 2025-11-24 17:47:19,396 | INFO     | . initial setup = 2 s
[2025-11-24 12:48:25] 2025-11-24 17:47:19,396 | INFO     | . payload setup = 5 s
[2025-11-24 12:48:25] 2025-11-24 17:47:19,396 | INFO     | . stage-in = 0 s
[2025-11-24 12:48:25] 2025-11-24 17:47:19,396 | INFO     | . payload execution = 69083 s
[2025-11-24 12:48:25] 2025-11-24 17:47:19,396 | INFO     | . stage-out = 3 s
[2025-11-24 12:48:25] 2025-11-24 17:47:19,396 | INFO     | . log creation = 0 s
[2025-11-24 12:48:25] 2025-11-24 17:47:19,396 | INFO     | ..............................
[2025-11-24 12:48:25] 2025-11-24 17:47:19,477 | INFO     | 
[2025-11-24 12:48:25] 2025-11-24 17:47:19,477 | INFO     | job summary report
[2025-11-24 12:48:25] 2025-11-24 17:47:19,477 | INFO     | --------------------------------------------------
[2025-11-24 12:48:25] 2025-11-24 17:47:19,477 | INFO     | PanDA job id: 6895352205
[2025-11-24 12:48:25] 2025-11-24 17:47:19,477 | INFO     | task id: 47556137
[2025-11-24 12:48:25] 2025-11-24 17:47:19,477 | INFO     | errors: (none)
[2025-11-24 12:48:25] 2025-11-24 17:47:19,478 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 12:48:25] 2025-11-24 17:47:19,478 | INFO     | pilot state: finished 
[2025-11-24 12:48:25] 2025-11-24 17:47:19,478 | INFO     | transexitcode: 0
[2025-11-24 12:48:25] 2025-11-24 17:47:19,478 | INFO     | exeerrorcode: 0
[2025-11-24 12:48:25] 2025-11-24 17:47:19,478 | INFO     | exeerrordiag: 
[2025-11-24 12:48:25] 2025-11-24 17:47:19,478 | INFO     | exitcode: 0
[2025-11-24 12:48:25] 2025-11-24 17:47:19,478 | INFO     | exitmsg: OK
[2025-11-24 12:48:25] 2025-11-24 17:47:19,478 | INFO     | cpuconsumptiontime: 537462 s
[2025-11-24 12:48:25] 2025-11-24 17:47:19,478 | INFO     | nevents: 1000
[2025-11-24 12:48:25] 2025-11-24 17:47:19,478 | INFO     | neventsw: 0
[2025-11-24 12:48:25] 2025-11-24 17:47:19,479 | INFO     | pid: 4677
[2025-11-24 12:48:25] 2025-11-24 17:47:19,479 | INFO     | pgrp: 4677
[2025-11-24 12:48:25] 2025-11-24 17:47:19,479 | INFO     | corecount: 8
[2025-11-24 12:48:25] 2025-11-24 17:47:19,479 | INFO     | event service: False
[2025-11-24 12:48:25] 2025-11-24 17:47:19,479 | INFO     | sizes: {0: 2298756, 4: 2299018, 11: 2299046, 69093: 2355107, 69097: 2364948, 69102: 2365234}
[2025-11-24 12:48:25] 2025-11-24 17:47:19,479 | INFO     | --------------------------------------------------
[2025-11-24 12:48:25] 2025-11-24 17:47:19,479 | INFO     | 
[2025-11-24 12:48:25] 2025-11-24 17:47:19,479 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 12:48:25] 2025-11-24 17:47:19,494 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 12:48:25] 2025-11-24 17:47:19,495 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 12:48:25] 2025-11-24 17:47:19,495 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 12:48:25] 2025-11-24 17:47:19,495 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 12:48:25] 2025-11-24 17:47:19,495 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 12:48:25] 2025-11-24 17:47:19,495 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 12:48:25] 2025-11-24 17:47:19,495 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 12:48:25] 2025-11-24 17:47:19,495 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 12:48:25] 2025-11-24 17:47:19,495 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 12:48:25] 2025-11-24 17:47:19,496 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 12:48:25] 2025-11-24 17:47:19,496 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 12:48:25] 2025-11-24 17:47:19,496 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 12:48:25] 2025-11-24 17:47:19,496 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 12:48:25] 2025-11-24 17:47:19,496 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 12:48:25] 2025-11-24 17:47:19,496 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 12:48:25] 2025-11-24 17:47:19,496 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 12:48:25] 2025-11-24 17:47:19,496 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 12:48:25] 2025-11-24 17:47:19,496 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 12:48:25] 2025-11-24 17:47:19,496 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 12:48:25] 2025-11-24 17:47:19,497 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 12:48:25] 2025-11-24 17:47:19,497 | INFO     | job 6895352205 has completed (purged errors)
[2025-11-24 12:48:25] 2025-11-24 17:47:19,497 | INFO     | overall cleanup function is called
[2025-11-24 12:48:25] 2025-11-24 17:47:20,509 | INFO     | --- collectZombieJob: --- 10, [4677]
[2025-11-24 12:48:25] 2025-11-24 17:47:20,509 | INFO     | zombie collector waiting for pid 4677
[2025-11-24 12:48:25] 2025-11-24 17:47:20,509 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 12:48:25] 2025-11-24 17:47:20,509 | INFO     | collected zombie processes
[2025-11-24 12:48:25] 2025-11-24 17:47:20,509 | INFO     | will attempt to kill all subprocesses of pid=4677
[2025-11-24 12:48:25] 2025-11-24 17:47:20,635 | INFO     | process IDs to be killed: [4677] (in reverse order)
[2025-11-24 12:48:25] 2025-11-24 17:47:20,676 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 12:48:25] 2025-11-24 17:47:20,676 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 12:48:25] 2025-11-24 17:47:20,679 | INFO     | did not find any defunct processes belonging to 4677
[2025-11-24 12:48:25] 2025-11-24 17:47:20,681 | INFO     | did not find any defunct processes belonging to 4677
[2025-11-24 12:48:25] 2025-11-24 17:47:20,682 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 12:48:25] 2025-11-24 17:47:20,682 | INFO     | ready for new job
[2025-11-24 12:48:25] 2025-11-24 17:47:20,683 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 12:48:25] 2025-11-24 17:47:20,686 | INFO     | ***************************************
[2025-11-24 12:48:25] 2025-11-24 17:47:20,686 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 12:48:25] 2025-11-24 17:47:20,687 | INFO     | ***************************************
[2025-11-24 12:48:25] 2025-11-24 17:47:20,687 | INFO     | 
[2025-11-24 12:48:25] 2025-11-24 17:47:20,688 | INFO     | architecture information:
[2025-11-24 12:48:25] 2025-11-24 17:47:20,688 | INFO     | executing command: cat /etc/os-release
[2025-11-24 12:48:25] 2025-11-24 17:47:20,698 | INFO     | cat /etc/os-release:
[2025-11-24 12:48:25] NAME="CentOS Linux"
[2025-11-24 12:48:25] VERSION="7 (Core)"
[2025-11-24 12:48:25] ID="centos"
[2025-11-24 12:48:25] ID_LIKE="rhel fedora"
[2025-11-24 12:48:25] VERSION_ID="7"
[2025-11-24 12:48:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 12:48:25] ANSI_COLOR="0;31"
[2025-11-24 12:48:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 12:48:25] HOME_URL="https://www.centos.org/"
[2025-11-24 12:48:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 12:48:25] 
[2025-11-24 12:48:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 12:48:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 12:48:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 12:48:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 12:48:25] 
[2025-11-24 12:48:25] 2025-11-24 17:47:20,698 | INFO     | ***************************************
[2025-11-24 12:48:25] 2025-11-24 17:47:21,200 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 12:48:25] 2025-11-24 17:47:21,214 | INFO     | sufficient remaining disk space (24567087104 B)
[2025-11-24 12:48:25] 2025-11-24 17:47:21,214 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 12:48:25] 2025-11-24 17:47:21,214 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 12:48:25] 2025-11-24 17:47:21,215 | INFO     | update_server=False
[2025-11-24 12:48:25] 2025-11-24 17:47:21,215 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 12:48:25] 2025-11-24 17:47:21,215 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 12:48:25] 2025-11-24 17:47:21,215 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 12:48:25] 2025-11-24 17:47:21,311 | INFO     | all data control threads have been joined
[2025-11-24 12:48:25] 2025-11-24 17:47:21,488 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 12:48:25] 2025-11-24 17:47:21,488 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 12:48:25] 2025-11-24 17:47:21,488 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 12:48:25] 2025-11-24 17:47:21,488 | INFO     | will abort loop
[2025-11-24 12:48:25] 2025-11-24 17:47:22,150 | INFO     | all payload control threads have been joined
[2025-11-24 12:48:25] 2025-11-24 17:47:22,217 | INFO     | [job] queue monitor thread has finished
[2025-11-24 12:48:25] 2025-11-24 17:47:22,220 | INFO     | [job] retrieve thread has finished
[2025-11-24 12:48:25] 2025-11-24 17:47:22,237 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 12:48:25] 2025-11-24 17:47:22,316 | INFO     | [data] control thread has finished
[2025-11-24 12:48:25] 2025-11-24 17:47:22,420 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 12:48:25] 2025-11-24 17:47:22,493 | INFO     | [job] job monitor thread has finished
[2025-11-24 12:48:25] 2025-11-24 17:47:22,665 | INFO     | [job] validate thread has finished
[2025-11-24 12:48:25] 2025-11-24 17:47:22,735 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 12:48:25] 2025-11-24 17:47:22,821 | INFO     | [data] copytool_in thread has finished
[2025-11-24 12:48:25] 2025-11-24 17:47:22,853 | INFO     | all job control threads have been joined
[2025-11-24 12:48:25] 2025-11-24 17:47:22,900 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 12:48:25] 2025-11-24 17:47:22,913 | INFO     | [payload] failed_post thread has finished
[2025-11-24 12:48:25] 2025-11-24 17:47:23,144 | INFO     | [payload] validate_post thread has finished
[2025-11-24 12:48:25] 2025-11-24 17:47:23,155 | INFO     | [payload] control thread has finished
[2025-11-24 12:48:25] 2025-11-24 17:47:23,614 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 12:48:25] 2025-11-24 17:47:23,858 | INFO     | [job] control thread has finished
[2025-11-24 12:48:25] 2025-11-24 17:47:24,426 | INFO     | [data] copytool_out thread has finished
[2025-11-24 12:48:25] 2025-11-24 17:47:25,221 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 12:48:25] 2025-11-24 17:47:51,891 | INFO     | PID=21823 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 12:48:25] 2025-11-24 17:47:51,891 | INFO     | .. there are 3 such processes running
[2025-11-24 12:48:25] 2025-11-24 17:47:51,892 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 12:48:25] 2025-11-24 17:47:51,892 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 12:48:25] 2025-11-24 17:47:51,892 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 12:48:25] 2025-11-24 17:48:18,306 | INFO     | [monitor] cgroup control has ended
[2025-11-24 12:48:25] 2025-11-24 17:48:20,200 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140683871336256)>', '<ExcThread(monitor, started 140683432146688)>']
[2025-11-24 12:48:25] 2025-11-24 17:48:21,022 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 12:48:25] 2025-11-24 17:48:21,022 | INFO     | [monitor] control thread has ended
[2025-11-24 12:48:25] 2025-11-24 17:48:25,225 | INFO     | all workflow threads have been joined
[2025-11-24 12:48:25] 2025-11-24 17:48:25,225 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 12:48:25] 2025-11-24 17:48:25,225 | INFO     | traces error code: 0
[2025-11-24 12:48:25] 2025-11-24 17:48:25,225 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 12:48:25] 2025-11-24 17:48:25,317 [wrapper] ==== pilot stdout END ====
[2025-11-24 12:48:25] 2025-11-24 17:48:25,319 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 12:48:25] 2025-11-24 17:48:25,321 [wrapper] pilotpid: 21823
[2025-11-24 12:48:25] 2025-11-24 17:48:25,323 [wrapper] Pilot exit status: 0
[2025-11-24 12:48:25] 2025-11-24 17:48:25,330 [wrapper] pandaids: 6895352205
[2025-11-24 12:48:25] 2025-11-24 17:48:25,358 [wrapper] cleanup supervisor_pilot 20103 21824
[2025-11-24 12:48:25] 2025-11-24 17:48:25,360 [wrapper] Test setup, not cleaning
[2025-11-24 12:48:25] 2025-11-24 17:48:25,363 [wrapper] apfmon messages muted
[2025-11-24 12:48:25] 2025-11-24 17:48:25,365 [wrapper] ==== wrapper stdout END ====
[2025-11-24 12:48:25] 2025-11-24 17:48:25,367 [wrapper] ==== wrapper stderr END ====
[2025-11-24 12:48:25]  *** Error codes and diagnostics ***
[2025-11-24 12:48:25]     "exeErrorCode": 0,
[2025-11-24 12:48:25]     "exeErrorDiag": "",
[2025-11-24 12:48:25]     "pilotErrorCode": 0,
[2025-11-24 12:48:25]     "pilotErrorDiag": "",
[2025-11-24 12:48:25]  *** Listing of results directory ***
[2025-11-24 12:48:25] total 1319892
[2025-11-24 12:48:25] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 21:20 pilot3.tar.gz
[2025-11-24 12:48:25] -rwx------ 1 boincer umatlas     36292 Nov 22 21:35 runpilot2-wrapper.sh
[2025-11-24 12:48:25] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 21:35 queuedata.json
[2025-11-24 12:48:25] -rw-r--r-- 1 boincer umatlas       100 Nov 23 17:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 12:48:25] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 17:35 run_atlas
[2025-11-24 12:48:25] -rw-r--r-- 1 boincer umatlas       105 Nov 23 17:35 job.xml
[2025-11-24 12:48:25] -rw-r--r-- 2 boincer umatlas 408259440 Nov 23 17:35 EVNT.47483658._000582.pool.root.1
[2025-11-24 12:48:25] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 17:35 start_atlas.sh
[2025-11-24 12:48:25] drwxrwx--x 2 boincer umatlas      4096 Nov 23 17:35 shared
[2025-11-24 12:48:25] -rw-r--r-- 2 boincer umatlas    590102 Nov 23 17:35 input.tar.gz
[2025-11-24 12:48:25] -rw-r--r-- 1 boincer umatlas         0 Nov 23 17:35 boinc_lockfile
[2025-11-24 12:48:25] -rw-r--r-- 1 boincer umatlas      2785 Nov 23 17:35 pandaJob.out
[2025-11-24 12:48:25] -rw------- 1 boincer umatlas        57 Nov 23 17:35 setup.sh.local
[2025-11-24 12:48:25] -rw------- 1 boincer umatlas    989786 Nov 23 17:35 agis_schedconf.cvmfs.json
[2025-11-24 12:48:25] drwx------ 5 boincer umatlas      4096 Nov 23 17:35 pilot3
[2025-11-24 12:48:25] -rw-r--r-- 1 boincer umatlas       533 Nov 24 12:30 boinc_task_state.xml
[2025-11-24 12:48:25] -rw-r--r-- 1 boincer umatlas      5954 Nov 24 12:46 init_data.xml
[2025-11-24 12:48:25] -rw------- 1 boincer umatlas 915676771 Nov 24 12:46 HITS.47556137._005774.pool.root.1
[2025-11-24 12:48:25] -rw------- 1 boincer umatlas      1064 Nov 24 12:47 memory_monitor_summary.json
[2025-11-24 12:48:25] -rw------- 1 boincer umatlas   1516227 Nov 24 12:47 agis_ddmendpoints.agis.ALL.json
[2025-11-24 12:48:25] -rw------- 1 boincer umatlas   2303966 Nov 24 12:47 log.47556137._005774.job.log.tgz.1
[2025-11-24 12:48:25] -rw------- 1 boincer umatlas        95 Nov 24 12:47 pilot_heartbeat.json
[2025-11-24 12:48:25] -rw------- 1 boincer umatlas      8660 Nov 24 12:47 heartbeat.json
[2025-11-24 12:48:25] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 12:48 boinc_mmap_file
[2025-11-24 12:48:25] -rw-r--r-- 1 boincer umatlas        29 Nov 24 12:48 wrapper_checkpoint.txt
[2025-11-24 12:48:25] -rw------- 1 boincer umatlas      5007 Nov 24 12:48 pilotlog.txt
[2025-11-24 12:48:25] -rw------- 1 boincer umatlas   9554360 Nov 24 12:48 log.47556137._005774.job.log.1
[2025-11-24 12:48:25] -rw------- 1 boincer umatlas       353 Nov 24 12:48 output.list
[2025-11-24 12:48:25] -rw-r--r-- 1 boincer umatlas       620 Nov 24 12:48 runtime_log
[2025-11-24 12:48:25] -rw------- 1 boincer umatlas  11878400 Nov 24 12:48 result.tar.gz
[2025-11-24 12:48:25] -rw-r--r-- 1 boincer umatlas      9343 Nov 24 12:48 runtime_log.err
[2025-11-24 12:48:25] -rw------- 1 boincer umatlas       668 Nov 24 12:48 pucLDmn7Eh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmlOIKDmHpKHUo.diag
[2025-11-24 12:48:25] -rw-r--r-- 1 boincer umatlas     21262 Nov 24 12:48 stderr.txt
[2025-11-24 12:48:25] HITS file was successfully produced:
[2025-11-24 12:48:25] -rw------- 1 boincer umatlas 915676771 Nov 24 12:46 shared/HITS.pool.root.1
[2025-11-24 12:48:25]  *** Contents of shared directory: ***
[2025-11-24 12:48:25] total 1305112
[2025-11-24 12:48:25] -rw-r--r-- 2 boincer umatlas 408259440 Nov 23 17:35 ATLAS.root_0
[2025-11-24 12:48:25] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 17:35 start_atlas.sh
[2025-11-24 12:48:25] -rw-r--r-- 2 boincer umatlas    590102 Nov 23 17:35 input.tar.gz
[2025-11-24 12:48:25] -rw------- 1 boincer umatlas 915676771 Nov 24 12:46 HITS.pool.root.1
[2025-11-24 12:48:25] -rw------- 1 boincer umatlas  11878400 Nov 24 12:48 result.tar.gz
12:48:27 (15618): run_atlas exited; CPU time 536944.341279
12:48:27 (15618): called boinc_finish(0)

</stderr_txt>
]]>

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