Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:11:07 (2762194): wrapper (7.7.26015): starting
21:11:07 (2762194): wrapper: running run_atlas (--nthreads 4)
[2025-11-26 21:11:07] Arguments: --nthreads 4
[2025-11-26 21:11:07] Threads: 4
[2025-11-26 21:11:07] Checking for CVMFS
[2025-11-26 21:11:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 21:11:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 21:11:07] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 21:11:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 21:11:07] 2.9.2.0 2464124 2088 74876 153333 3 81 34610451 36864001 0 130560 0 817474 99.980 79408 1078 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 21:11:07] CVMFS is ok
[2025-11-26 21:11:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 21:11:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 21:11:07] Further information can be found at the LHC@home message board.
[2025-11-26 21:11:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 21:11:07] Checking for apptainer binary...
[2025-11-26 21:11:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 21:11:07] Running /usr/bin/apptainer --version
[2025-11-26 21:11:07] apptainer version 1.4.1-1.1
[2025-11-26 21:11:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 21:11:07] cosA131
[2025-11-26 21:11:07] apptainer works
[2025-11-26 21:11:07] Set ATHENA_PROC_NUMBER=4
[2025-11-26 21:11:07] Set ATHENA_CORE_NUMBER=4
[2025-11-26 21:11:07] Starting ATLAS job with PandaID=6895352020
[2025-11-26 21:11:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 04:03:04]  *** The last 200 lines of the pilot log: ***
[2025-11-27 04:03:04] 2025-11-27 03:02:31,497 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 04:03:04] 2025-11-27 03:02:31,500 | INFO     | fitting pss+swap vs Time
[2025-11-27 04:03:04] 2025-11-27 03:02:31,500 | INFO     | sum of square deviations: 20446541505.0
[2025-11-27 04:03:04] 2025-11-27 03:02:31,502 | INFO     | sum of deviations: 200938860022.5
[2025-11-27 04:03:04] 2025-11-27 03:02:31,502 | INFO     | mean x: 1764200190.5
[2025-11-27 04:03:04] 2025-11-27 03:02:31,502 | INFO     | mean y: 2365202.7301980196
[2025-11-27 04:03:04] 2025-11-27 03:02:31,502 | INFO     | intersect: -17335353014.497826
[2025-11-27 04:03:04] 2025-11-27 03:02:31,502 | INFO     | chi2: 3.9253423888447907
[2025-11-27 04:03:04] 2025-11-27 03:02:31,502 | INFO     | sum of square deviations: 19696741400.0
[2025-11-27 04:03:04] 2025-11-27 03:02:31,504 | INFO     | sum of deviations: 249027277240.99997
[2025-11-27 04:03:04] 2025-11-27 03:02:31,504 | INFO     | mean x: 1764200038.0
[2025-11-27 04:03:04] 2025-11-27 03:02:31,504 | INFO     | mean y: 2374928.3458646615
[2025-11-27 04:03:04] 2025-11-27 03:02:31,504 | INFO     | intersect: -22302529372.809692
[2025-11-27 04:03:04] 2025-11-27 03:02:31,504 | INFO     | chi2: 2.9064382431391893
[2025-11-27 04:03:04] 2025-11-27 03:02:31,504 | INFO     | current chi2=2.9064382431391893 (change=25.957076982664436 %)
[2025-11-27 04:03:04] 2025-11-27 03:02:31,504 | INFO     | sum of square deviations: 18965499782.5
[2025-11-27 04:03:04] 2025-11-27 03:02:31,506 | INFO     | sum of deviations: 243732001440.99997
[2025-11-27 04:03:04] 2025-11-27 03:02:31,506 | INFO     | mean x: 1764199885.5
[2025-11-27 04:03:04] 2025-11-27 03:02:31,506 | INFO     | mean y: 2373823.989847716
[2025-11-27 04:03:04] 2025-11-27 03:02:31,506 | INFO     | intersect: -22669950869.064835
[2025-11-27 04:03:04] 2025-11-27 03:02:31,506 | INFO     | chi2: 2.90593731150846
[2025-11-27 04:03:04] 2025-11-27 03:02:31,506 | INFO     | current chi2=2.90593731150846 (change=0.017235240828242286 %)
[2025-11-27 04:03:04] 2025-11-27 03:02:31,506 | INFO     | right removable region: 393
[2025-11-27 04:03:04] 2025-11-27 03:02:31,506 | INFO     | sum of square deviations: 19696741400.0
[2025-11-27 04:03:04] 2025-11-27 03:02:31,508 | INFO     | sum of deviations: 103747931420.99995
[2025-11-27 04:03:04] 2025-11-27 03:02:31,508 | INFO     | mean x: 1764200343.0
[2025-11-27 04:03:04] 2025-11-27 03:02:31,508 | INFO     | mean y: 2384943.7944862153
[2025-11-27 04:03:04] 2025-11-27 03:02:31,508 | INFO     | intersect: -9290123521.512804
[2025-11-27 04:03:04] 2025-11-27 03:02:31,508 | INFO     | chi2: 1.5798372643314065
[2025-11-27 04:03:04] 2025-11-27 03:02:31,508 | INFO     | current chi2=1.5798372643314065 (change=59.75287993167024 %)
[2025-11-27 04:03:04] 2025-11-27 03:02:31,508 | INFO     | sum of square deviations: 18965499782.5
[2025-11-27 04:03:04] 2025-11-27 03:02:31,510 | INFO     | sum of deviations: 65586962832.0
[2025-11-27 04:03:04] 2025-11-27 03:02:31,510 | INFO     | mean x: 1764200495.5
[2025-11-27 04:03:04] 2025-11-27 03:02:31,510 | INFO     | mean y: 2392862.730964467
[2025-11-27 04:03:04] 2025-11-27 03:02:31,510 | INFO     | intersect: -6098609149.002047
[2025-11-27 04:03:04] 2025-11-27 03:02:31,510 | INFO     | chi2: 1.0716712912090007
[2025-11-27 04:03:04] 2025-11-27 03:02:31,510 | INFO     | current chi2=1.0716712912090007 (change=32.165716342781906 %)
[2025-11-27 04:03:04] 2025-11-27 03:02:31,510 | INFO     | sum of square deviations: 18252584090.0
[2025-11-27 04:03:04] 2025-11-27 03:02:31,511 | INFO     | sum of deviations: 55102956882.0
[2025-11-27 04:03:04] 2025-11-27 03:02:31,512 | INFO     | mean x: 1764200648.0
[2025-11-27 04:03:04] 2025-11-27 03:02:31,512 | INFO     | mean y: 2395104.3316195374
[2025-11-27 04:03:04] 2025-11-27 03:02:31,512 | INFO     | intersect: -5323572537.214551
[2025-11-27 04:03:04] 2025-11-27 03:02:31,512 | INFO     | chi2: 1.0575388533428103
[2025-11-27 04:03:04] 2025-11-27 03:02:31,512 | INFO     | current chi2=1.0575388533428103 (change=1.3187287913859305 %)
[2025-11-27 04:03:04] 2025-11-27 03:02:31,512 | INFO     | left removable region: 30
[2025-11-27 04:03:04] 2025-11-27 03:02:31,512 | INFO     | sum of square deviations: 14831839022.0
[2025-11-27 04:03:04] 2025-11-27 03:02:31,513 | INFO     | sum of deviations: 75167974558.0
[2025-11-27 04:03:04] 2025-11-27 03:02:31,513 | INFO     | mean x: 1764200770.0
[2025-11-27 04:03:04] 2025-11-27 03:02:31,513 | INFO     | mean y: 2410458.2369146007
[2025-11-27 04:03:04] 2025-11-27 03:02:31,513 | INFO     | intersect: -8938584545.677444
[2025-11-27 04:03:04] 2025-11-27 03:02:31,514 | INFO     | chi2: 0.013456394072755642
[2025-11-27 04:03:04] 2025-11-27 03:02:31,514 | INFO     | current memory leak: 5.07 B/s (using 363 data points, chi2=0.01)
[2025-11-27 04:03:04] 2025-11-27 03:02:31,514 | INFO     | could have reported an average CPU frequency of 3745 MHz (17 samples)
[2025-11-27 04:03:04] 2025-11-27 03:02:31,514 | INFO     | ..............................
[2025-11-27 04:03:04] 2025-11-27 03:02:31,514 | INFO     | . Timing measurements:
[2025-11-27 04:03:04] 2025-11-27 03:02:31,514 | INFO     | . get job = 0 s
[2025-11-27 04:03:04] 2025-11-27 03:02:31,514 | INFO     | . initial setup = 1 s
[2025-11-27 04:03:04] 2025-11-27 03:02:31,514 | INFO     | . payload setup = 4 s
[2025-11-27 04:03:04] 2025-11-27 03:02:31,514 | INFO     | . stage-in = 0 s
[2025-11-27 04:03:04] 2025-11-27 03:02:31,514 | INFO     | . payload execution = 24645 s
[2025-11-27 04:03:04] 2025-11-27 03:02:31,514 | INFO     | . stage-out = 1 s
[2025-11-27 04:03:04] 2025-11-27 03:02:31,514 | INFO     | . log creation = 0 s
[2025-11-27 04:03:04] 2025-11-27 03:02:31,514 | INFO     | ..............................
[2025-11-27 04:03:04] 2025-11-27 03:02:31,553 | INFO     | 
[2025-11-27 04:03:04] 2025-11-27 03:02:31,553 | INFO     | job summary report
[2025-11-27 04:03:04] 2025-11-27 03:02:31,554 | INFO     | --------------------------------------------------
[2025-11-27 04:03:04] 2025-11-27 03:02:31,554 | INFO     | PanDA job id: 6895352020
[2025-11-27 04:03:04] 2025-11-27 03:02:31,554 | INFO     | task id: 47556137
[2025-11-27 04:03:04] 2025-11-27 03:02:31,554 | INFO     | errors: (none)
[2025-11-27 04:03:04] 2025-11-27 03:02:31,554 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 04:03:04] 2025-11-27 03:02:31,554 | INFO     | pilot state: finished 
[2025-11-27 04:03:04] 2025-11-27 03:02:31,554 | INFO     | transexitcode: 0
[2025-11-27 04:03:04] 2025-11-27 03:02:31,554 | INFO     | exeerrorcode: 0
[2025-11-27 04:03:04] 2025-11-27 03:02:31,554 | INFO     | exeerrordiag: 
[2025-11-27 04:03:04] 2025-11-27 03:02:31,554 | INFO     | exitcode: 0
[2025-11-27 04:03:04] 2025-11-27 03:02:31,554 | INFO     | exitmsg: OK
[2025-11-27 04:03:04] 2025-11-27 03:02:31,554 | INFO     | cpuconsumptiontime: 96590 s
[2025-11-27 04:03:04] 2025-11-27 03:02:31,554 | INFO     | nevents: 1000
[2025-11-27 04:03:04] 2025-11-27 03:02:31,554 | INFO     | neventsw: 0
[2025-11-27 04:03:04] 2025-11-27 03:02:31,554 | INFO     | pid: 2772562
[2025-11-27 04:03:04] 2025-11-27 03:02:31,554 | INFO     | pgrp: 2772562
[2025-11-27 04:03:04] 2025-11-27 03:02:31,554 | INFO     | corecount: 4
[2025-11-27 04:03:04] 2025-11-27 03:02:31,554 | INFO     | event service: False
[2025-11-27 04:03:04] 2025-11-27 03:02:31,554 | INFO     | sizes: {0: 2284318, 3: 2284580, 10: 2284608, 24653: 2321502, 24654: 2330502, 24656: 2330558, 24661: 2330996}
[2025-11-27 04:03:04] 2025-11-27 03:02:31,554 | INFO     | --------------------------------------------------
[2025-11-27 04:03:04] 2025-11-27 03:02:31,554 | INFO     | 
[2025-11-27 04:03:04] 2025-11-27 03:02:31,554 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-27 04:03:04] 2025-11-27 03:02:31,572 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 04:03:04] 2025-11-27 03:02:31,572 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 04:03:04] 2025-11-27 03:02:31,572 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 04:03:04] 2025-11-27 03:02:31,572 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 04:03:04] 2025-11-27 03:02:31,572 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 04:03:04] 2025-11-27 03:02:31,572 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 04:03:04] 2025-11-27 03:02:31,572 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 04:03:04] 2025-11-27 03:02:31,572 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 04:03:04] 2025-11-27 03:02:31,573 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 04:03:04] 2025-11-27 03:02:31,573 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 04:03:04] 2025-11-27 03:02:31,573 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 04:03:04] 2025-11-27 03:02:31,573 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 04:03:04] 2025-11-27 03:02:31,573 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 04:03:04] 2025-11-27 03:02:31,573 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 04:03:04] 2025-11-27 03:02:31,573 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 04:03:04] 2025-11-27 03:02:31,573 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 04:03:04] 2025-11-27 03:02:31,573 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 04:03:04] 2025-11-27 03:02:31,573 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 04:03:04] 2025-11-27 03:02:31,573 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 04:03:04] 2025-11-27 03:02:31,573 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 04:03:04] 2025-11-27 03:02:31,573 | INFO     | job 6895352020 has completed (purged errors)
[2025-11-27 04:03:04] 2025-11-27 03:02:31,573 | INFO     | overall cleanup function is called
[2025-11-27 04:03:04] 2025-11-27 03:02:32,157 | INFO     | PID=2765986 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 04:03:04] 2025-11-27 03:02:32,582 | INFO     | --- collectZombieJob: --- 10, [2772562]
[2025-11-27 04:03:04] 2025-11-27 03:02:32,583 | INFO     | zombie collector waiting for pid 2772562
[2025-11-27 04:03:04] 2025-11-27 03:02:32,583 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 04:03:04] 2025-11-27 03:02:32,583 | INFO     | collected zombie processes
[2025-11-27 04:03:04] 2025-11-27 03:02:32,583 | INFO     | will attempt to kill all subprocesses of pid=2772562
[2025-11-27 04:03:04] 2025-11-27 03:02:32,635 | INFO     | process IDs to be killed: [2772562] (in reverse order)
[2025-11-27 04:03:04] 2025-11-27 03:02:32,672 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 04:03:04] 2025-11-27 03:02:32,672 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 04:03:04] 2025-11-27 03:02:32,674 | INFO     | did not find any defunct processes belonging to 2772562
[2025-11-27 04:03:04] 2025-11-27 03:02:32,676 | INFO     | did not find any defunct processes belonging to 2772562
[2025-11-27 04:03:04] 2025-11-27 03:02:32,677 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 04:03:04] 2025-11-27 03:02:32,677 | INFO     | ready for new job
[2025-11-27 04:03:04] 2025-11-27 03:02:32,677 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 04:03:04] 2025-11-27 03:02:32,678 | INFO     | ***************************************
[2025-11-27 04:03:04] 2025-11-27 03:02:32,678 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 04:03:04] 2025-11-27 03:02:32,678 | INFO     | ***************************************
[2025-11-27 04:03:04] 2025-11-27 03:02:32,678 | INFO     | 
[2025-11-27 04:03:04] 2025-11-27 03:02:32,679 | INFO     | architecture information:
[2025-11-27 04:03:04] 2025-11-27 03:02:32,679 | INFO     | executing command: cat /etc/os-release
[2025-11-27 04:03:04] 2025-11-27 03:02:32,693 | INFO     | cat /etc/os-release:
[2025-11-27 04:03:04] NAME="CentOS Linux"
[2025-11-27 04:03:04] VERSION="7 (Core)"
[2025-11-27 04:03:04] ID="centos"
[2025-11-27 04:03:04] ID_LIKE="rhel fedora"
[2025-11-27 04:03:04] VERSION_ID="7"
[2025-11-27 04:03:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 04:03:04] ANSI_COLOR="0;31"
[2025-11-27 04:03:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 04:03:04] HOME_URL="https://www.centos.org/"
[2025-11-27 04:03:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 04:03:04] 
[2025-11-27 04:03:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 04:03:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 04:03:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 04:03:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 04:03:04] 
[2025-11-27 04:03:04] 2025-11-27 03:02:32,694 | INFO     | ***************************************
[2025-11-27 04:03:04] 2025-11-27 03:02:33,197 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-27 04:03:04] 2025-11-27 03:02:33,216 | INFO     | sufficient remaining disk space (322001960960 B)
[2025-11-27 04:03:04] 2025-11-27 03:02:33,216 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 04:03:04] 2025-11-27 03:02:33,216 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 04:03:04] 2025-11-27 03:02:33,216 | INFO     | update_server=False
[2025-11-27 04:03:04] 2025-11-27 03:02:33,216 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 04:03:04] 2025-11-27 03:02:33,216 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 04:03:04] 2025-11-27 03:02:33,217 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:03:04] 2025-11-27 03:02:33,217 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 04:03:04] 2025-11-27 03:02:33,831 | INFO     | all data control threads have been joined
[2025-11-27 04:03:04] 2025-11-27 03:02:33,863 | INFO     | all job control threads have been joined
[2025-11-27 04:03:04] 2025-11-27 03:02:33,986 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:03:04] 2025-11-27 03:02:33,986 | INFO     | aborting loop
[2025-11-27 04:03:04] 2025-11-27 03:02:34,217 | INFO     | [job] retrieve thread has finished
[2025-11-27 04:03:04] 2025-11-27 03:02:34,222 | INFO     | [job] queue monitor thread has finished
[2025-11-27 04:03:04] 2025-11-27 03:02:34,419 | INFO     | all payload control threads have been joined
[2025-11-27 04:03:04] 2025-11-27 03:02:34,476 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 04:03:04] 2025-11-27 03:02:34,671 | INFO     | [job] validate thread has finished
[2025-11-27 04:03:04] 2025-11-27 03:02:34,837 | INFO     | [data] control thread has finished
[2025-11-27 04:03:04] 2025-11-27 03:02:34,869 | INFO     | [job] control thread has finished
[2025-11-27 04:03:04] 2025-11-27 03:02:34,966 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 04:03:04] 2025-11-27 03:02:34,992 | INFO     | [job] job monitor thread has finished
[2025-11-27 04:03:04] 2025-11-27 03:02:35,146 | INFO     | [payload] failed_post thread has finished
[2025-11-27 04:03:04] 2025-11-27 03:02:35,223 | INFO     | [data] copytool_out thread has finished
[2025-11-27 04:03:04] 2025-11-27 03:02:35,425 | INFO     | [payload] control thread has finished
[2025-11-27 04:03:04] 2025-11-27 03:02:35,536 | INFO     | [data] copytool_in thread has finished
[2025-11-27 04:03:04] 2025-11-27 03:02:35,538 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 04:03:04] 2025-11-27 03:02:35,709 | INFO     | [payload] validate_post thread has finished
[2025-11-27 04:03:04] 2025-11-27 03:02:37,224 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 04:03:04] 2025-11-27 03:02:43,363 | INFO     | job.realtimelogging is not enabled
[2025-11-27 04:03:04] 2025-11-27 03:02:44,369 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 04:03:04] 2025-11-27 03:02:44,937 | INFO     | [monitor] cgroup control has ended
[2025-11-27 04:03:04] 2025-11-27 03:02:45,205 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140318329792320)>', '<ExcThread(monitor, started 140317839841024)>']
[2025-11-27 04:03:04] 2025-11-27 03:02:50,231 | INFO     | all workflow threads have been joined
[2025-11-27 04:03:04] 2025-11-27 03:02:50,231 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 04:03:04] 2025-11-27 03:02:50,231 | INFO     | traces error code: 0
[2025-11-27 04:03:04] 2025-11-27 03:02:50,231 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 04:03:04] 2025-11-27 03:03:04,293 | INFO     | PID=2765986 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 04:03:04] 2025-11-27 03:03:04,294 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 04:03:04] 2025-11-27 03:03:04,294 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 04:03:04] 2025-11-27 03:03:04,294 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 04:03:04] 2025-11-27 03:03:04,294 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 04:03:04] 2025-11-27 03:03:04,294 | INFO     | [monitor] control thread has ended
[2025-11-27 04:03:04] 2025-11-27 03:03:04,373 [wrapper] ==== pilot stdout END ====
[2025-11-27 04:03:04] 2025-11-27 03:03:04,377 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 04:03:04] 2025-11-27 03:03:04,382 [wrapper] pilotpid: 2765986
[2025-11-27 04:03:04] 2025-11-27 03:03:04,386 [wrapper] Pilot exit status: 0
[2025-11-27 04:03:04] 2025-11-27 03:03:04,399 [wrapper] pandaids: 6895352020
[2025-11-27 04:03:04] 2025-11-27 03:03:04,424 [wrapper] cleanup supervisor_pilot 2818635 2765987
[2025-11-27 04:03:04] 2025-11-27 03:03:04,429 [wrapper] Test setup, not cleaning
[2025-11-27 04:03:04] 2025-11-27 03:03:04,433 [wrapper] apfmon messages muted
[2025-11-27 04:03:04] 2025-11-27 03:03:04,437 [wrapper] ==== wrapper stdout END ====
[2025-11-27 04:03:04] 2025-11-27 03:03:04,441 [wrapper] ==== wrapper stderr END ====
[2025-11-27 04:03:04]  *** Error codes and diagnostics ***
[2025-11-27 04:03:04]     "exeErrorCode": 0,
[2025-11-27 04:03:04]     "exeErrorDiag": "",
[2025-11-27 04:03:04]     "pilotErrorCode": 0,
[2025-11-27 04:03:04]     "pilotErrorDiag": "",
[2025-11-27 04:03:04]  *** Listing of results directory ***
[2025-11-27 04:03:04] total 1298676
[2025-11-27 04:03:04] -rw-r--r-- 1 boinc boinc    576529 Nov 23 03:20 pilot3.tar.gz
[2025-11-27 04:03:04] -rwx------ 1 boinc boinc     36292 Nov 23 03:22 runpilot2-wrapper.sh
[2025-11-27 04:03:04] -rw-r--r-- 1 boinc boinc      5112 Nov 23 03:22 queuedata.json
[2025-11-27 04:03:04] -rw-r--r-- 1 boinc boinc       100 Nov 26 21:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 04:03:04] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 21:11 run_atlas
[2025-11-27 04:03:04] -rw-r--r-- 1 boinc boinc       105 Nov 26 21:11 job.xml
[2025-11-27 04:03:04] -rw-r--r-- 2 boinc boinc 408614321 Nov 26 21:11 EVNT.47483658._000578.pool.root.1
[2025-11-27 04:03:04] drwxrwx--x 2 boinc boinc      4096 Nov 26 21:11 shared
[2025-11-27 04:03:04] -rw-r--r-- 2 boinc boinc    590095 Nov 26 21:11 input.tar.gz
[2025-11-27 04:03:04] -rw-r--r-- 2 boinc boinc     15847 Nov 26 21:11 start_atlas.sh
[2025-11-27 04:03:04] -rw-r--r-- 1 boinc boinc         0 Nov 26 21:11 boinc_setup_complete
[2025-11-27 04:03:04] -rw-r--r-- 1 boinc boinc      6380 Nov 26 21:11 init_data.xml
[2025-11-27 04:03:04] -rw-r--r-- 1 boinc boinc         0 Nov 26 21:11 boinc_lockfile
[2025-11-27 04:03:04] -rw-r--r-- 1 boinc boinc      2786 Nov 26 21:11 pandaJob.out
[2025-11-27 04:03:04] -rw------- 1 boinc boinc    991522 Nov 26 21:11 agis_schedconf.cvmfs.json
[2025-11-27 04:03:04] drwx------ 5 boinc boinc      4096 Nov 26 21:11 pilot3
[2025-11-27 04:03:04] -rw-r--r-- 1 boinc boinc       532 Nov 27 03:57 boinc_task_state.xml
[2025-11-27 04:03:04] -rw------- 1 boinc boinc 907812453 Nov 27 04:02 HITS.47556137._005739.pool.root.1
[2025-11-27 04:03:04] -rw------- 1 boinc boinc      1028 Nov 27 04:02 memory_monitor_summary.json
[2025-11-27 04:03:04] -rw------- 1 boinc boinc   1516240 Nov 27 04:02 agis_ddmendpoints.agis.ALL.json
[2025-11-27 04:03:04] -rw------- 1 boinc boinc   1260198 Nov 27 04:02 log.47556137._005739.job.log.tgz.1
[2025-11-27 04:03:04] -rw------- 1 boinc boinc      8573 Nov 27 04:02 heartbeat.json
[2025-11-27 04:03:04] -rw-r--r-- 1 boinc boinc        28 Nov 27 04:03 wrapper_checkpoint.txt
[2025-11-27 04:03:04] -rw------- 1 boinc boinc       747 Nov 27 04:03 pilotlog.txt
[2025-11-27 04:03:04] -rw------- 1 boinc boinc        95 Nov 27 04:03 pilot_heartbeat.json
[2025-11-27 04:03:04] -rw------- 1 boinc boinc   3490538 Nov 27 04:03 log.47556137._005739.job.log.1
[2025-11-27 04:03:04] -rw------- 1 boinc boinc       353 Nov 27 04:03 output.list
[2025-11-27 04:03:04] -rw-r--r-- 1 boinc boinc       620 Nov 27 04:03 runtime_log
[2025-11-27 04:03:04] -rw------- 1 boinc boinc   4771840 Nov 27 04:03 result.tar.gz
[2025-11-27 04:03:04] -rw-r--r-- 1 boinc boinc      8192 Nov 27 04:03 boinc_mmap_file
[2025-11-27 04:03:04] -rw-r--r-- 1 boinc boinc      8903 Nov 27 04:03 runtime_log.err
[2025-11-27 04:03:04] -rw------- 1 boinc boinc       666 Nov 27 04:03 00jMDmevEh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmlXKKDmJOPUIm.diag
[2025-11-27 04:03:04] -rw-r--r-- 1 boinc boinc     21127 Nov 27 04:03 stderr.txt
[2025-11-27 04:03:04] HITS file was successfully produced:
[2025-11-27 04:03:04] -rw------- 1 boinc boinc 907812453 Nov 27 04:02 shared/HITS.pool.root.1
[2025-11-27 04:03:04]  *** Contents of shared directory: ***
[2025-11-27 04:03:04] total 1290840
[2025-11-27 04:03:04] -rw-r--r-- 2 boinc boinc 408614321 Nov 26 21:11 ATLAS.root_0
[2025-11-27 04:03:04] -rw-r--r-- 2 boinc boinc    590095 Nov 26 21:11 input.tar.gz
[2025-11-27 04:03:04] -rw-r--r-- 2 boinc boinc     15847 Nov 26 21:11 start_atlas.sh
[2025-11-27 04:03:04] -rw------- 1 boinc boinc 907812453 Nov 27 04:02 HITS.pool.root.1
[2025-11-27 04:03:04] -rw------- 1 boinc boinc   4771840 Nov 27 04:03 result.tar.gz
04:03:06 (2762194): run_atlas exited; CPU time 96581.029414
04:03:06 (2762194): called boinc_finish(0)

</stderr_txt>
]]>

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