Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
02:06:51 (781780): wrapper (7.7.26015): starting
02:06:51 (781780): wrapper: running run_atlas (--nthreads 3)
[2025-11-25 02:06:51] Arguments: --nthreads 3
[2025-11-25 02:06:51] Threads: 3
[2025-11-25 02:06:51] Checking for CVMFS
[2025-11-25 02:06:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 02:06:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 02:06:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 02:06:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 02:06:52] 2.12.7.0 3613689 4459 45548 153264 1 90 4688955 6144000 6670 130560 0 16088637 99.965 623773 726 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-25 02:06:52] CVMFS is ok
[2025-11-25 02:06:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 02:06:52] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-25 02:06:52] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-25 02:06:52] Further information can be found at the LHC@home message board.
[2025-11-25 02:06:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 02:06:52] Checking for apptainer binary...
[2025-11-25 02:06:52] apptainer is not installed, using version from CVMFS
[2025-11-25 02:06:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 02:06:52] biggy
[2025-11-25 02:06:52] apptainer works
[2025-11-25 02:06:52] Set ATHENA_PROC_NUMBER=3
[2025-11-25 02:06:52] Set ATHENA_CORE_NUMBER=3
[2025-11-25 02:06:52] Starting ATLAS job with PandaID=6893857660
[2025-11-25 02:06:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/single_8TB/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 10:51:56]  *** The last 200 lines of the pilot log: ***
[2025-11-25 10:51:56] 2025-11-25 09:51:20,003 | INFO     | monitor loop #2357: job 0:6893857660 is in state 'finished'
[2025-11-25 10:51:56] 2025-11-25 09:51:20,003 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 10:51:56] 2025-11-25 09:51:20,720 | INFO     | time since job start (31463s) is within the limit (172800.0s)
[2025-11-25 10:51:56] 2025-11-25 09:51:20,993 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-11-25 10:51:56] 2025-11-25 09:51:22,511 | INFO     | monitor loop #2358: job 0:6893857660 is in state 'finished'
[2025-11-25 10:51:56] 2025-11-25 09:51:22,511 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 10:51:56] 2025-11-25 09:51:22,693 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 10:51:56] 2025-11-25 09:51:22,693 | INFO     | job 6893857660 has state=finished
[2025-11-25 10:51:56] 2025-11-25 09:51:22,693 | INFO     | preparing for final server update for job 6893857660 in state='finished'
[2025-11-25 10:51:56] 2025-11-25 09:51:22,694 | INFO     | this job has now completed (state=finished)
[2025-11-25 10:51:56] 2025-11-25 09:51:22,694 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-25 10:51:56] 2025-11-25 09:51:22,694 | INFO     | log transfer has been attempted: DONE
[2025-11-25 10:51:56] 2025-11-25 09:51:22,694 | INFO     | job 6893857660 has finished - writing final server update
[2025-11-25 10:51:56] 2025-11-25 09:51:22,694 | INFO     | total number of processed events: 1000 (read)
[2025-11-25 10:51:56] 2025-11-25 09:51:22,694 | INFO     | executing command: lscpu
[2025-11-25 10:51:56] 2025-11-25 09:51:22,709 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-25 10:51:56] 2025-11-25 09:51:22,725 | INFO     | time since job start (31465s) is within the limit (172800.0s)
[2025-11-25 10:51:56] 2025-11-25 09:51:24,259 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-25 10:51:56] 2025-11-25 09:51:24,261 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 5221.267999999998
[2025-11-25 10:51:56] 2025-11-25 09:51:24,263 | INFO     | using path: /single_8TB/boinc-client/slots/4/PanDA_Pilot-6893857660/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 10:51:56] 2025-11-25 09:51:24,263 | INFO     | extracted standard info from prmon json
[2025-11-25 10:51:56] 2025-11-25 09:51:24,263 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 10:51:56] 2025-11-25 09:51:24,263 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 10:51:56] 2025-11-25 09:51:24,266 | INFO     | fitting pss+swap vs Time
[2025-11-25 10:51:56] 2025-11-25 09:51:24,266 | INFO     | sum of square deviations: 42601598765.0
[2025-11-25 10:51:56] 2025-11-25 09:51:24,268 | INFO     | sum of deviations: 1798432397520.0
[2025-11-25 10:51:56] 2025-11-25 09:51:24,268 | INFO     | mean x: 1764048543.5
[2025-11-25 10:51:56] 2025-11-25 09:51:24,268 | INFO     | mean y: 4251372.457364341
[2025-11-25 10:51:56] 2025-11-25 09:51:24,268 | INFO     | intersect: -74465302432.99284
[2025-11-25 10:51:56] 2025-11-25 09:51:24,268 | INFO     | chi2: 14.838239026603004
[2025-11-25 10:51:56] 2025-11-25 09:51:24,268 | INFO     | sum of square deviations: 41375138560.0
[2025-11-25 10:51:56] 2025-11-25 09:51:24,269 | INFO     | sum of deviations: 1912516342608.0005
[2025-11-25 10:51:56] 2025-11-25 09:51:24,269 | INFO     | mean x: 1764048391.0
[2025-11-25 10:51:56] 2025-11-25 09:51:24,269 | INFO     | mean y: 4265467.352250489
[2025-11-25 10:51:56] 2025-11-25 09:51:24,270 | INFO     | intersect: -81536763623.01288
[2025-11-25 10:51:56] 2025-11-25 09:51:24,270 | INFO     | chi2: 13.303805667946081
[2025-11-25 10:51:56] 2025-11-25 09:51:24,270 | INFO     | current chi2=13.303805667946081 (change=10.341074543319367 %)
[2025-11-25 10:51:56] 2025-11-25 09:51:24,270 | INFO     | right removable region: 510
[2025-11-25 10:51:56] 2025-11-25 09:51:24,270 | INFO     | sum of square deviations: 41375138560.0
[2025-11-25 10:51:56] 2025-11-25 09:51:24,271 | INFO     | sum of deviations: 1566511092798.0
[2025-11-25 10:51:56] 2025-11-25 09:51:24,271 | INFO     | mean x: 1764048696.0
[2025-11-25 10:51:56] 2025-11-25 09:51:24,271 | INFO     | mean y: 4280172.818003914
[2025-11-25 10:51:56] 2025-11-25 09:51:24,271 | INFO     | intersect: -66784664751.49954
[2025-11-25 10:51:56] 2025-11-25 09:51:24,272 | INFO     | chi2: 12.22826871250765
[2025-11-25 10:51:56] 2025-11-25 09:51:24,272 | INFO     | current chi2=12.22826871250765 (change=17.58948827698504 %)
[2025-11-25 10:51:56] 2025-11-25 09:51:24,272 | INFO     | left removable region: 10
[2025-11-25 10:51:56] 2025-11-25 09:51:24,272 | INFO     | sum of square deviations: 38760261625.0
[2025-11-25 10:51:56] 2025-11-25 09:51:24,273 | INFO     | sum of deviations: 1493212876881.0
[2025-11-25 10:51:56] 2025-11-25 09:51:24,273 | INFO     | mean x: 1764048665.5
[2025-11-25 10:51:56] 2025-11-25 09:51:24,273 | INFO     | mean y: 4316950.772
[2025-11-25 10:51:56] 2025-11-25 09:51:24,273 | INFO     | intersect: -67954465377.734634
[2025-11-25 10:51:56] 2025-11-25 09:51:24,274 | INFO     | chi2: 9.358459612215569
[2025-11-25 10:51:56] 2025-11-25 09:51:24,274 | INFO     | current memory leak: 38.52 B/s (using 500 data points, chi2=9.36)
[2025-11-25 10:51:56] 2025-11-25 09:51:24,274 | INFO     | could have reported an average CPU frequency of 5104 MHz (21 samples)
[2025-11-25 10:51:56] 2025-11-25 09:51:24,274 | INFO     | ..............................
[2025-11-25 10:51:56] 2025-11-25 09:51:24,274 | INFO     | . Timing measurements:
[2025-11-25 10:51:56] 2025-11-25 09:51:24,274 | INFO     | . get job = 0 s
[2025-11-25 10:51:56] 2025-11-25 09:51:24,274 | INFO     | . initial setup = 1 s
[2025-11-25 10:51:56] 2025-11-25 09:51:24,274 | INFO     | . payload setup = 2 s
[2025-11-25 10:51:56] 2025-11-25 09:51:24,274 | INFO     | . stage-in = 0 s
[2025-11-25 10:51:56] 2025-11-25 09:51:24,274 | INFO     | . payload execution = 31438 s
[2025-11-25 10:51:56] 2025-11-25 09:51:24,274 | INFO     | . stage-out = 2 s
[2025-11-25 10:51:56] 2025-11-25 09:51:24,274 | INFO     | . log creation = 0 s
[2025-11-25 10:51:56] 2025-11-25 09:51:24,274 | INFO     | ..............................
[2025-11-25 10:51:56] 2025-11-25 09:51:24,295 | INFO     | 
[2025-11-25 10:51:56] 2025-11-25 09:51:24,296 | INFO     | job summary report
[2025-11-25 10:51:56] 2025-11-25 09:51:24,296 | INFO     | --------------------------------------------------
[2025-11-25 10:51:56] 2025-11-25 09:51:24,296 | INFO     | PanDA job id: 6893857660
[2025-11-25 10:51:56] 2025-11-25 09:51:24,296 | INFO     | task id: 47523449
[2025-11-25 10:51:56] 2025-11-25 09:51:24,296 | INFO     | errors: (none)
[2025-11-25 10:51:56] 2025-11-25 09:51:24,296 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 10:51:56] 2025-11-25 09:51:24,296 | INFO     | pilot state: finished 
[2025-11-25 10:51:56] 2025-11-25 09:51:24,296 | INFO     | transexitcode: 0
[2025-11-25 10:51:56] 2025-11-25 09:51:24,296 | INFO     | exeerrorcode: 0
[2025-11-25 10:51:56] 2025-11-25 09:51:24,296 | INFO     | exeerrordiag: 
[2025-11-25 10:51:56] 2025-11-25 09:51:24,296 | INFO     | exitcode: 0
[2025-11-25 10:51:56] 2025-11-25 09:51:24,296 | INFO     | exitmsg: OK
[2025-11-25 10:51:56] 2025-11-25 09:51:24,296 | INFO     | cpuconsumptiontime: 93398 s
[2025-11-25 10:51:56] 2025-11-25 09:51:24,296 | INFO     | nevents: 1000
[2025-11-25 10:51:56] 2025-11-25 09:51:24,296 | INFO     | neventsw: 0
[2025-11-25 10:51:56] 2025-11-25 09:51:24,296 | INFO     | pid: 792377
[2025-11-25 10:51:56] 2025-11-25 09:51:24,296 | INFO     | pgrp: 792377
[2025-11-25 10:51:56] 2025-11-25 09:51:24,296 | INFO     | corecount: 3
[2025-11-25 10:51:56] 2025-11-25 09:51:24,296 | INFO     | event service: False
[2025-11-25 10:51:56] 2025-11-25 09:51:24,296 | INFO     | sizes: {0: 2284314, 3: 2284576, 11: 2284604, 31445: 2324472, 31448: 2333491, 31451: 2333547, 31454: 2333921}
[2025-11-25 10:51:56] 2025-11-25 09:51:24,296 | INFO     | --------------------------------------------------
[2025-11-25 10:51:56] 2025-11-25 09:51:24,296 | INFO     | 
[2025-11-25 10:51:56] 2025-11-25 09:51:24,296 | INFO     | executing command: ls -lF /single_8TB/boinc-client/slots/4
[2025-11-25 10:51:56] 2025-11-25 09:51:24,305 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 10:51:56] 2025-11-25 09:51:24,305 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 10:51:56] 2025-11-25 09:51:24,305 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 10:51:56] 2025-11-25 09:51:24,305 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 10:51:56] 2025-11-25 09:51:24,305 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 10:51:56] 2025-11-25 09:51:24,305 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 10:51:56] 2025-11-25 09:51:24,305 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 10:51:56] 2025-11-25 09:51:24,306 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 10:51:56] 2025-11-25 09:51:24,306 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 10:51:56] 2025-11-25 09:51:24,306 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 10:51:56] 2025-11-25 09:51:24,306 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 10:51:56] 2025-11-25 09:51:24,306 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 10:51:56] 2025-11-25 09:51:24,306 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 10:51:56] 2025-11-25 09:51:24,306 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 10:51:56] 2025-11-25 09:51:24,306 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 10:51:56] 2025-11-25 09:51:24,306 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 10:51:56] 2025-11-25 09:51:24,306 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 10:51:56] 2025-11-25 09:51:24,306 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 10:51:56] 2025-11-25 09:51:24,306 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 10:51:56] 2025-11-25 09:51:24,306 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 10:51:56] 2025-11-25 09:51:24,306 | INFO     | job 6893857660 has completed (purged errors)
[2025-11-25 10:51:56] 2025-11-25 09:51:24,306 | INFO     | overall cleanup function is called
[2025-11-25 10:51:56] 2025-11-25 09:51:25,315 | INFO     | --- collectZombieJob: --- 10, [792377]
[2025-11-25 10:51:56] 2025-11-25 09:51:25,315 | INFO     | zombie collector waiting for pid 792377
[2025-11-25 10:51:56] 2025-11-25 09:51:25,315 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 10:51:56] 2025-11-25 09:51:25,315 | INFO     | collected zombie processes
[2025-11-25 10:51:56] 2025-11-25 09:51:25,315 | INFO     | will attempt to kill all subprocesses of pid=792377
[2025-11-25 10:51:56] 2025-11-25 09:51:25,397 | INFO     | process IDs to be killed: [792377] (in reverse order)
[2025-11-25 10:51:56] 2025-11-25 09:51:25,436 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 10:51:56] 2025-11-25 09:51:25,436 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 10:51:56] 2025-11-25 09:51:25,440 | INFO     | did not find any defunct processes belonging to 792377
[2025-11-25 10:51:56] 2025-11-25 09:51:25,444 | INFO     | did not find any defunct processes belonging to 792377
[2025-11-25 10:51:56] 2025-11-25 09:51:25,445 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 10:51:56] 2025-11-25 09:51:25,445 | INFO     | ready for new job
[2025-11-25 10:51:56] 2025-11-25 09:51:25,445 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 10:51:56] 2025-11-25 09:51:25,446 | INFO     | ***************************************
[2025-11-25 10:51:56] 2025-11-25 09:51:25,446 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 10:51:56] 2025-11-25 09:51:25,446 | INFO     | ***************************************
[2025-11-25 10:51:56] 2025-11-25 09:51:25,446 | INFO     | 
[2025-11-25 10:51:56] 2025-11-25 09:51:25,447 | INFO     | architecture information:
[2025-11-25 10:51:56] 2025-11-25 09:51:25,447 | INFO     | executing command: cat /etc/os-release
[2025-11-25 10:51:56] 2025-11-25 09:51:25,454 | INFO     | cat /etc/os-release:
[2025-11-25 10:51:56] NAME="CentOS Linux"
[2025-11-25 10:51:56] VERSION="7 (Core)"
[2025-11-25 10:51:56] ID="centos"
[2025-11-25 10:51:56] ID_LIKE="rhel fedora"
[2025-11-25 10:51:56] VERSION_ID="7"
[2025-11-25 10:51:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 10:51:56] ANSI_COLOR="0;31"
[2025-11-25 10:51:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 10:51:56] HOME_URL="https://www.centos.org/"
[2025-11-25 10:51:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 10:51:56] 
[2025-11-25 10:51:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 10:51:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 10:51:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 10:51:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 10:51:56] 
[2025-11-25 10:51:56] 2025-11-25 09:51:25,455 | INFO     | ***************************************
[2025-11-25 10:51:56] 2025-11-25 09:51:25,957 | INFO     | executing command: df -mP /single_8TB/boinc-client/slots/4
[2025-11-25 10:51:56] 2025-11-25 09:51:25,964 | INFO     | sufficient remaining disk space (950887514112 B)
[2025-11-25 10:51:56] 2025-11-25 09:51:25,965 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 10:51:56] 2025-11-25 09:51:25,965 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 10:51:56] 2025-11-25 09:51:25,965 | INFO     | update_server=False
[2025-11-25 10:51:56] 2025-11-25 09:51:25,965 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 10:51:56] 2025-11-25 09:51:25,965 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 10:51:56] 2025-11-25 09:51:25,965 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 10:51:56] 2025-11-25 09:51:26,019 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 10:51:56] 2025-11-25 09:51:26,019 | INFO     | aborting loop
[2025-11-25 10:51:56] 2025-11-25 09:51:26,735 | INFO     | all payload control threads have been joined
[2025-11-25 10:51:56] 2025-11-25 09:51:26,885 | INFO     | all data control threads have been joined
[2025-11-25 10:51:56] 2025-11-25 09:51:26,970 | INFO     | [job] retrieve thread has finished
[2025-11-25 10:51:56] 2025-11-25 09:51:26,970 | INFO     | [job] queue monitor thread has finished
[2025-11-25 10:51:56] 2025-11-25 09:51:27,024 | INFO     | [job] job monitor thread has finished
[2025-11-25 10:51:56] 2025-11-25 09:51:27,028 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 10:51:56] 2025-11-25 09:51:27,180 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 10:51:56] 2025-11-25 09:51:27,215 | INFO     | [payload] validate_post thread has finished
[2025-11-25 10:51:56] 2025-11-25 09:51:27,455 | INFO     | all job control threads have been joined
[2025-11-25 10:51:56] 2025-11-25 09:51:27,740 | INFO     | [payload] control thread has finished
[2025-11-25 10:51:56] 2025-11-25 09:51:27,890 | INFO     | [data] control thread has finished
[2025-11-25 10:51:56] 2025-11-25 09:51:27,934 | INFO     | [data] copytool_in thread has finished
[2025-11-25 10:51:56] 2025-11-25 09:51:27,934 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 10:51:56] 2025-11-25 09:51:27,970 | INFO     | [data] copytool_out thread has finished
[2025-11-25 10:51:56] 2025-11-25 09:51:28,016 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 10:51:56] 2025-11-25 09:51:28,216 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 10:51:56] 2025-11-25 09:51:28,238 | INFO     | [job] validate thread has finished
[2025-11-25 10:51:56] 2025-11-25 09:51:28,270 | INFO     | [payload] failed_post thread has finished
[2025-11-25 10:51:56] 2025-11-25 09:51:28,460 | INFO     | [job] control thread has finished
[2025-11-25 10:51:56] 2025-11-25 09:51:31,033 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 10:51:56] 2025-11-25 09:51:48,726 | INFO     | [monitor] cgroup control has ended
[2025-11-25 10:51:56] 2025-11-25 09:51:49,341 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138328520337216)>', '<ExcThread(monitor, started 138327978129152)>']
[2025-11-25 10:51:56] 2025-11-25 09:51:54,367 | INFO     | all workflow threads have been joined
[2025-11-25 10:51:56] 2025-11-25 09:51:54,367 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 10:51:56] 2025-11-25 09:51:54,368 | INFO     | traces error code: 0
[2025-11-25 10:51:56] 2025-11-25 09:51:54,368 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 10:51:56] 2025-11-25 09:51:55,892 | INFO     | PID=785641 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 10:51:56] 2025-11-25 09:51:55,892 | INFO     | .. there are 5 such processes running
[2025-11-25 10:51:56] 2025-11-25 09:51:55,892 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 10:51:56] 2025-11-25 09:51:55,892 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 10:51:56] 2025-11-25 09:51:55,892 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 10:51:56] 2025-11-25 09:51:55,892 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 10:51:56] 2025-11-25 09:51:55,892 | INFO     | [monitor] control thread has ended
[2025-11-25 10:51:56] 2025-11-25 09:51:55,947 [wrapper] ==== pilot stdout END ====
[2025-11-25 10:51:56] 2025-11-25 09:51:55,948 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 10:51:56] 2025-11-25 09:51:55,949 [wrapper] pilotpid: 785641
[2025-11-25 10:51:56] 2025-11-25 09:51:55,952 [wrapper] Pilot exit status: 0
[2025-11-25 10:51:56] 2025-11-25 09:51:55,956 [wrapper] pandaids: 6893857660
[2025-11-25 10:51:56] 2025-11-25 09:51:55,980 [wrapper] cleanup supervisor_pilot 1406561 785642
[2025-11-25 10:51:56] 2025-11-25 09:51:55,981 [wrapper] Test setup, not cleaning
[2025-11-25 10:51:56] 2025-11-25 09:51:55,983 [wrapper] apfmon messages muted
[2025-11-25 10:51:56] 2025-11-25 09:51:55,984 [wrapper] ==== wrapper stdout END ====
[2025-11-25 10:51:56] 2025-11-25 09:51:55,985 [wrapper] ==== wrapper stderr END ====
[2025-11-25 10:51:56]  *** Error codes and diagnostics ***
[2025-11-25 10:51:56]     "exeErrorCode": 0,
[2025-11-25 10:51:56]     "exeErrorDiag": "",
[2025-11-25 10:51:56]     "pilotErrorCode": 0,
[2025-11-25 10:51:56]     "pilotErrorDiag": "",
[2025-11-25 10:51:56]  *** Listing of results directory ***
[2025-11-25 10:51:56] total 1298600
[2025-11-25 10:51:56] -rw-r--r-- 1 boinc boinc    576529 Nov 20 14:01 pilot3.tar.gz
[2025-11-25 10:51:56] -rwx------ 1 boinc boinc     36292 Nov 20 14:08 runpilot2-wrapper.sh
[2025-11-25 10:51:56] -rw-r--r-- 1 boinc boinc      5112 Nov 20 14:08 queuedata.json
[2025-11-25 10:51:56] -rw-r--r-- 1 boinc boinc       100 Nov 25 02:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 10:51:56] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 02:06 run_atlas
[2025-11-25 10:51:56] -rw-r--r-- 1 boinc boinc       105 Nov 25 02:06 job.xml
[2025-11-25 10:51:56] -rw-r--r-- 2 boinc boinc 406495110 Nov 25 02:06 EVNT.47493127._000497.pool.root.1
[2025-11-25 10:51:56] -rw-r--r-- 2 boinc boinc     15847 Nov 25 02:06 start_atlas.sh
[2025-11-25 10:51:56] -rw-r--r-- 2 boinc boinc    590098 Nov 25 02:06 input.tar.gz
[2025-11-25 10:51:56] drwxrwx--x 2 boinc boinc         5 Nov 25 02:06 shared
[2025-11-25 10:51:56] -rw-r--r-- 1 boinc boinc         0 Nov 25 02:06 boinc_setup_complete
[2025-11-25 10:51:56] -rw-r--r-- 1 boinc boinc         0 Nov 25 02:06 boinc_lockfile
[2025-11-25 10:51:56] -rw-r--r-- 1 boinc boinc      2783 Nov 25 02:06 pandaJob.out
[2025-11-25 10:51:56] -rw------- 1 boinc boinc    991801 Nov 25 02:06 agis_schedconf.cvmfs.json
[2025-11-25 10:51:56] drwx------ 5 boinc boinc        22 Nov 25 02:06 pilot3
[2025-11-25 10:51:56] -rw-r--r-- 1 boinc boinc      6813 Nov 25 03:07 init_data.xml
[2025-11-25 10:51:56] -rw-r--r-- 1 boinc boinc       531 Nov 25 10:48 boinc_task_state.xml
[2025-11-25 10:51:56] -rw------- 1 boinc boinc 912493309 Nov 25 10:50 HITS.47523449._004961.pool.root.1
[2025-11-25 10:51:56] -rw------- 1 boinc boinc      1059 Nov 25 10:51 memory_monitor_summary.json
[2025-11-25 10:51:56] -rw------- 1 boinc boinc   1516240 Nov 25 10:51 agis_ddmendpoints.agis.ALL.json
[2025-11-25 10:51:56] -rw------- 1 boinc boinc        95 Nov 25 10:51 pilot_heartbeat.json
[2025-11-25 10:51:56] -rw------- 1 boinc boinc   1215388 Nov 25 10:51 log.47523449._004961.job.log.tgz.1
[2025-11-25 10:51:56] -rw------- 1 boinc boinc      8608 Nov 25 10:51 heartbeat.json
[2025-11-25 10:51:56] -rw-r--r-- 1 boinc boinc        28 Nov 25 10:51 wrapper_checkpoint.txt
[2025-11-25 10:51:56] -rw-r--r-- 1 boinc boinc      8192 Nov 25 10:51 boinc_mmap_file
[2025-11-25 10:51:56] -rw------- 1 boinc boinc       821 Nov 25 10:51 pilotlog.txt
[2025-11-25 10:51:56] -rw------- 1 boinc boinc   4524223 Nov 25 10:51 log.47523449._004961.job.log.1
[2025-11-25 10:51:56] -rw------- 1 boinc boinc       353 Nov 25 10:51 output.list
[2025-11-25 10:51:56] -rw-r--r-- 1 boinc boinc       620 Nov 25 10:51 runtime_log
[2025-11-25 10:51:56] -rw------- 1 boinc boinc   5754880 Nov 25 10:51 result.tar.gz
[2025-11-25 10:51:56] -rw-r--r-- 1 boinc boinc      8940 Nov 25 10:51 runtime_log.err
[2025-11-25 10:51:56] -rw------- 1 boinc boinc       660 Nov 25 10:51 mKfMDmQZJg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxgGKDmlHs3Sn.diag
[2025-11-25 10:51:56] -rw-r--r-- 1 boinc boinc     21861 Nov 25 10:51 stderr.txt
[2025-11-25 10:51:56] HITS file was successfully produced:
[2025-11-25 10:51:56] -rw------- 1 boinc boinc 912493309 Nov 25 10:50 shared/HITS.pool.root.1
[2025-11-25 10:51:56]  *** Contents of shared directory: ***
[2025-11-25 10:51:56] total 1289696
[2025-11-25 10:51:56] -rw-r--r-- 2 boinc boinc 406495110 Nov 25 02:06 ATLAS.root_0
[2025-11-25 10:51:56] -rw-r--r-- 2 boinc boinc    590098 Nov 25 02:06 input.tar.gz
[2025-11-25 10:51:56] -rw-r--r-- 2 boinc boinc     15847 Nov 25 02:06 start_atlas.sh
[2025-11-25 10:51:56] -rw------- 1 boinc boinc 912493309 Nov 25 10:50 HITS.pool.root.1
[2025-11-25 10:51:56] -rw------- 1 boinc boinc   5754880 Nov 25 10:51 result.tar.gz
10:51:58 (781780): run_atlas exited; CPU time 93632.828415
10:51:58 (781780): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN