Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:08:11 (1112470): wrapper (7.7.26015): starting
13:08:11 (1112470): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 13:08:11] Arguments: --nthreads 3
[2025-11-27 13:08:11] Threads: 3
[2025-11-27 13:08:11] Checking for CVMFS
[2025-11-27 13:08:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 13:08:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 13:08:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 13:08:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 13:08:11] 2.9.2.0 3626579 12551 93308 153362 1 81 9197019 36864000 0 130560 0 4582418 99.876 714056 5998 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 13:08:11] CVMFS is ok
[2025-11-27 13:08:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 13:08:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 13:08:11] Further information can be found at the LHC@home message board.
[2025-11-27 13:08:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 13:08:11] Checking for apptainer binary...
[2025-11-27 13:08:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 13:08:11] Running /usr/bin/apptainer --version
[2025-11-27 13:08:11] apptainer version 1.4.1-1.1
[2025-11-27 13:08:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 13:08:11] thA332
[2025-11-27 13:08:11] apptainer works
[2025-11-27 13:08:11] Set ATHENA_PROC_NUMBER=3
[2025-11-27 13:08:11] Set ATHENA_CORE_NUMBER=3
[2025-11-27 13:08:11] Starting ATLAS job with PandaID=6894052191
[2025-11-27 13:08:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 16:59:53]  *** The last 200 lines of the pilot log: ***
[2025-11-27 16:59:53] VERSION="7 (Core)"
[2025-11-27 16:59:53] ID="centos"
[2025-11-27 16:59:53] ID_LIKE="rhel fedora"
[2025-11-27 16:59:53] VERSION_ID="7"
[2025-11-27 16:59:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 16:59:53] ANSI_COLOR="0;31"
[2025-11-27 16:59:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 16:59:53] HOME_URL="https://www.centos.org/"
[2025-11-27 16:59:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 16:59:53] 
[2025-11-27 16:59:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 16:59:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 16:59:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 16:59:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 16:59:53] 
[2025-11-27 16:59:53] 2025-11-27 15:59:22,223 | INFO     | ***************************************
[2025-11-27 16:59:53] 2025-11-27 15:59:22,727 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-27 16:59:53] 2025-11-27 15:59:22,740 | INFO     | sufficient remaining disk space (247747051520 B)
[2025-11-27 16:59:53] 2025-11-27 15:59:22,740 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 16:59:53] 2025-11-27 15:59:22,740 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 16:59:53] 2025-11-27 15:59:22,740 | INFO     | update_server=False
[2025-11-27 16:59:53] 2025-11-27 15:59:22,740 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 16:59:53] 2025-11-27 15:59:22,740 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 16:59:53] 2025-11-27 15:59:22,775 | INFO     | all payload control threads have been joined
[2025-11-27 16:59:53] 2025-11-27 15:59:22,952 | INFO     | all job control threads have been joined
[2025-11-27 16:59:53] 2025-11-27 15:59:23,122 | INFO     | all data control threads have been joined
[2025-11-27 16:59:53] 2025-11-27 15:59:23,184 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 16:59:53] 2025-11-27 15:59:23,184 | INFO     | aborting loop
[2025-11-27 16:59:53] 2025-11-27 15:59:23,746 | INFO     | [job] retrieve thread has finished
[2025-11-27 16:59:53] 2025-11-27 15:59:23,746 | INFO     | [job] queue monitor thread has finished
[2025-11-27 16:59:53] 2025-11-27 15:59:23,781 | INFO     | [payload] control thread has finished
[2025-11-27 16:59:53] 2025-11-27 15:59:23,958 | INFO     | [job] control thread has finished
[2025-11-27 16:59:53] 2025-11-27 15:59:24,079 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 16:59:53] 2025-11-27 15:59:24,087 | INFO     | [payload] failed_post thread has finished
[2025-11-27 16:59:53] 2025-11-27 15:59:24,128 | INFO     | [data] control thread has finished
[2025-11-27 16:59:53] 2025-11-27 15:59:24,190 | INFO     | [job] job monitor thread has finished
[2025-11-27 16:59:53] 2025-11-27 15:59:24,328 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 16:59:53] 2025-11-27 15:59:24,574 | INFO     | [data] copytool_in thread has finished
[2025-11-27 16:59:53] 2025-11-27 15:59:24,726 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 16:59:53] 2025-11-27 15:59:24,789 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 16:59:53] 2025-11-27 15:59:25,063 | INFO     | [payload] validate_post thread has finished
[2025-11-27 16:59:53] 2025-11-27 15:59:25,077 | INFO     | [job] validate thread has finished
[2025-11-27 16:59:53] 2025-11-27 15:59:25,149 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 16:59:53] 2025-11-27 15:59:25,169 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 16:59:53] 2025-11-27 15:59:26,085 | INFO     | [data] copytool_out thread has finished
[2025-11-27 16:59:53] 2025-11-27 15:59:28,795 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 16:59:53] 2025-11-27 15:59:31,917 | INFO     | [monitor] cgroup control has ended
[2025-11-27 16:59:53] 2025-11-27 15:59:32,683 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140633529026368)>', '<ExcThread(monitor, started 140633041782528)>']
[2025-11-27 16:59:53] 2025-11-27 15:59:37,690 | INFO     | all workflow threads have been joined
[2025-11-27 16:59:53] 2025-11-27 15:59:37,690 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 16:59:53] 2025-11-27 15:59:37,690 | INFO     | traces error code: 0
[2025-11-27 16:59:53] 2025-11-27 15:59:37,690 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 16:59:53] 2025-11-27 15:59:53,151 | INFO     | PID=1116193 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 16:59:53] 2025-11-27 15:59:53,151 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 16:59:53] 2025-11-27 15:59:53,151 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 16:59:53] 2025-11-27 15:59:53,151 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 16:59:53] 2025-11-27 15:59:53,151 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 16:59:53] 2025-11-27 15:59:53,152 | INFO     | [monitor] control thread has ended
[2025-11-27 16:59:53] 2025-11-27 15:59:53,202 [wrapper] ==== pilot stdout END ====
[2025-11-27 16:59:53] 2025-11-27 15:59:53,204 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 16:59:53] 2025-11-27 15:59:53,207 [wrapper] pilotpid: 1116193
[2025-11-27 16:59:53] 2025-11-27 15:59:53,209 [wrapper] Pilot exit status: 0
[2025-11-27 16:59:53] 2025-11-27 15:59:53,217 [wrapper] pandaids: 6894052191
[2025-11-27 16:59:53] 2025-11-27 15:59:53,232 [wrapper] cleanup supervisor_pilot 1151355 1116194
[2025-11-27 16:59:53] 2025-11-27 15:59:53,235 [wrapper] Test setup, not cleaning
[2025-11-27 16:59:53] 2025-11-27 15:59:53,237 [wrapper] apfmon messages muted
[2025-11-27 16:59:53] 2025-11-27 15:59:53,239 [wrapper] ==== wrapper stdout END ====
[2025-11-27 16:59:53] 2025-11-27 15:59:53,241 [wrapper] ==== wrapper stderr END ====
[2025-11-27 16:59:53]  *** Error codes and diagnostics ***
[2025-11-27 16:59:53]     "exeErrorCode": 0,
[2025-11-27 16:59:53]     "exeErrorDiag": "",
[2025-11-27 16:59:53]     "pilotErrorCode": 0,
[2025-11-27 16:59:53]     "pilotErrorDiag": "",
[2025-11-27 16:59:53]  *** Listing of results directory ***
[2025-11-27 16:59:53] total 625712
[2025-11-27 16:59:53] -rw-r--r-- 1 boinc boinc    576529 Nov 23 02:50 pilot3.tar.gz
[2025-11-27 16:59:53] -rwx------ 1 boinc boinc     36292 Nov 23 03:18 runpilot2-wrapper.sh
[2025-11-27 16:59:53] -rw-r--r-- 1 boinc boinc      5112 Nov 23 03:18 queuedata.json
[2025-11-27 16:59:53] -rw-r--r-- 1 boinc boinc       100 Nov 27 13:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 16:59:53] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 13:08 run_atlas
[2025-11-27 16:59:53] -rw-r--r-- 1 boinc boinc       105 Nov 27 13:08 job.xml
[2025-11-27 16:59:53] -rw-r--r-- 2 boinc boinc 292942607 Nov 27 13:08 EVNT.47523648._000002.pool.root.1
[2025-11-27 16:59:53] -rw-r--r-- 2 boinc boinc    589952 Nov 27 13:08 input.tar.gz
[2025-11-27 16:59:53] -rw-r--r-- 2 boinc boinc     15847 Nov 27 13:08 start_atlas.sh
[2025-11-27 16:59:53] drwxrwx--x 2 boinc boinc      4096 Nov 27 13:08 shared
[2025-11-27 16:59:53] -rw-r--r-- 1 boinc boinc         0 Nov 27 13:08 boinc_setup_complete
[2025-11-27 16:59:53] -rw-r--r-- 1 boinc boinc      6440 Nov 27 13:08 init_data.xml
[2025-11-27 16:59:53] -rw-r--r-- 1 boinc boinc         0 Nov 27 13:08 boinc_lockfile
[2025-11-27 16:59:53] -rw-r--r-- 1 boinc boinc      2623 Nov 27 13:08 pandaJob.out
[2025-11-27 16:59:53] -rw------- 1 boinc boinc    991572 Nov 27 13:08 agis_schedconf.cvmfs.json
[2025-11-27 16:59:53] drwx------ 5 boinc boinc      4096 Nov 27 13:08 pilot3
[2025-11-27 16:59:53] -rw-r--r-- 1 boinc boinc       530 Nov 27 16:58 boinc_task_state.xml
[2025-11-27 16:59:53] -rw------- 1 boinc boinc 339193979 Nov 27 16:58 HITS.47523650._000039.pool.root.1
[2025-11-27 16:59:53] -rw------- 1 boinc boinc      1023 Nov 27 16:59 memory_monitor_summary.json
[2025-11-27 16:59:53] -rw------- 1 boinc boinc   1516240 Nov 27 16:59 agis_ddmendpoints.agis.ALL.json
[2025-11-27 16:59:53] -rw------- 1 boinc boinc    383136 Nov 27 16:59 log.47523650._000039.job.log.tgz.1
[2025-11-27 16:59:53] -rw------- 1 boinc boinc      7751 Nov 27 16:59 heartbeat.json
[2025-11-27 16:59:53] -rw-r--r-- 1 boinc boinc      8192 Nov 27 16:59 boinc_mmap_file
[2025-11-27 16:59:53] -rw-r--r-- 1 boinc boinc        28 Nov 27 16:59 wrapper_checkpoint.txt
[2025-11-27 16:59:53] -rw------- 1 boinc boinc       747 Nov 27 16:59 pilotlog.txt
[2025-11-27 16:59:53] -rw------- 1 boinc boinc        95 Nov 27 16:59 pilot_heartbeat.json
[2025-11-27 16:59:53] -rw------- 1 boinc boinc   1960053 Nov 27 16:59 log.47523650._000039.job.log.1
[2025-11-27 16:59:53] -rw------- 1 boinc boinc       357 Nov 27 16:59 output.list
[2025-11-27 16:59:53] -rw-r--r-- 1 boinc boinc       620 Nov 27 16:59 runtime_log
[2025-11-27 16:59:53] -rw------- 1 boinc boinc   2365440 Nov 27 16:59 result.tar.gz
[2025-11-27 16:59:53] -rw-r--r-- 1 boinc boinc      8898 Nov 27 16:59 runtime_log.err
[2025-11-27 16:59:53] -rw------- 1 boinc boinc       662 Nov 27 16:59 OjRLDmRrEh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAOIKDmZ70cen.diag
[2025-11-27 16:59:53] -rw-r--r-- 1 boinc boinc      8665 Nov 27 16:59 stderr.txt
[2025-11-27 16:59:53] HITS file was successfully produced:
[2025-11-27 16:59:53] -rw------- 1 boinc boinc 339193979 Nov 27 16:58 shared/HITS.pool.root.1
[2025-11-27 16:59:53]  *** Contents of shared directory: ***
[2025-11-27 16:59:53] total 620244
[2025-11-27 16:59:53] -rw-r--r-- 2 boinc boinc 292942607 Nov 27 13:08 ATLAS.root_0
[2025-11-27 16:59:53] -rw-r--r-- 2 boinc boinc    589952 Nov 27 13:08 input.tar.gz
[2025-11-27 16:59:53] -rw-r--r-- 2 boinc boinc     15847 Nov 27 13:08 start_atlas.sh
[2025-11-27 16:59:53] -rw------- 1 boinc boinc 339193979 Nov 27 16:58 HITS.pool.root.1
[2025-11-27 16:59:53] -rw------- 1 boinc boinc   2365440 Nov 27 16:59 result.tar.gz
16:59:54 (1112470): run_atlas exited; CPU time 40718.641937
16:59:54 (1112470): called boinc_finish(0)

</stderr_txt>
]]>

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