Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:27:43 (2553483): wrapper (7.7.26015): starting
23:27:43 (2553483): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 23:27:43] Arguments: --nthreads 3
[2025-11-27 23:27:43] Threads: 3
[2025-11-27 23:27:43] Checking for CVMFS
[2025-11-27 23:27:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 23:27:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 23:27:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 23:27:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 23:27:43] 2.9.2.0 751620 13251 91668 153387 0 81 33633155 36864001 0 130560 0 4903503 99.941 654345 4814 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 23:27:43] CVMFS is ok
[2025-11-27 23:27:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 23:27:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 23:27:43] Further information can be found at the LHC@home message board.
[2025-11-27 23:27:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 23:27:43] Checking for apptainer binary...
[2025-11-27 23:27:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 23:27:43] Running /usr/bin/apptainer --version
[2025-11-27 23:27:43] apptainer version 1.4.1-1.1
[2025-11-27 23:27:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 23:27:43] thA361a
[2025-11-27 23:27:43] apptainer works
[2025-11-27 23:27:43] Set ATHENA_PROC_NUMBER=3
[2025-11-27 23:27:43] Set ATHENA_CORE_NUMBER=3
[2025-11-27 23:27:43] Starting ATLAS job with PandaID=6895334462
[2025-11-27 23:27:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 07:39:48]  *** The last 200 lines of the pilot log: ***
[2025-11-28 07:39:48] 2025-11-28 06:39:14,345 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-28 07:39:48] 2025-11-28 06:39:15,296 | INFO     | monitor loop #2249: job 0:6895334462 is in state 'finished'
[2025-11-28 07:39:48] 2025-11-28 06:39:15,297 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 07:39:48] 2025-11-28 06:39:15,706 | INFO     | time since job start (29486s) is within the limit (172800.0s)
[2025-11-28 07:39:48] 2025-11-28 06:39:16,835 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 07:39:48] 2025-11-28 06:39:16,837 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3691.4339999999997
[2025-11-28 07:39:48] 2025-11-28 06:39:16,838 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6895334462/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 07:39:48] 2025-11-28 06:39:16,838 | INFO     | extracted standard info from prmon json
[2025-11-28 07:39:48] 2025-11-28 06:39:16,838 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 07:39:48] 2025-11-28 06:39:16,838 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 07:39:48] 2025-11-28 06:39:16,841 | INFO     | fitting pss+swap vs Time
[2025-11-28 07:39:48] 2025-11-28 06:39:16,841 | INFO     | sum of square deviations: 34939602082.0
[2025-11-28 07:39:48] 2025-11-28 06:39:16,843 | INFO     | sum of deviations: 169114740922.00003
[2025-11-28 07:39:48] 2025-11-28 06:39:16,843 | INFO     | mean x: 1764297191.0
[2025-11-28 07:39:48] 2025-11-28 06:39:16,843 | INFO     | mean y: 2195045.797101449
[2025-11-28 07:39:48] 2025-11-28 06:39:16,843 | INFO     | intersect: -8537360203.433667
[2025-11-28 07:39:48] 2025-11-28 06:39:16,844 | INFO     | chi2: 4.1071968113902715
[2025-11-28 07:39:48] 2025-11-28 06:39:16,844 | INFO     | sum of square deviations: 33865712179.5
[2025-11-28 07:39:48] 2025-11-28 06:39:16,846 | INFO     | sum of deviations: 251298929929.0
[2025-11-28 07:39:48] 2025-11-28 06:39:16,846 | INFO     | mean x: 1764297038.5
[2025-11-28 07:39:48] 2025-11-28 06:39:16,846 | INFO     | mean y: 2206694.0041841003
[2025-11-28 07:39:48] 2025-11-28 06:39:16,846 | INFO     | intersect: -13089676786.903013
[2025-11-28 07:39:48] 2025-11-28 06:39:16,846 | INFO     | chi2: 2.3853486889257858
[2025-11-28 07:39:48] 2025-11-28 06:39:16,846 | INFO     | current chi2=2.3853486889257858 (change=41.92270790845414 %)
[2025-11-28 07:39:48] 2025-11-28 06:39:16,846 | INFO     | sum of square deviations: 32814055252.0
[2025-11-28 07:39:48] 2025-11-28 06:39:16,848 | INFO     | sum of deviations: 247990294015.99994
[2025-11-28 07:39:48] 2025-11-28 06:39:16,848 | INFO     | mean x: 1764296886.0
[2025-11-28 07:39:48] 2025-11-28 06:39:16,848 | INFO     | mean y: 2206214.2558139535
[2025-11-28 07:39:48] 2025-11-28 06:39:16,848 | INFO     | intersect: -13331363810.253302
[2025-11-28 07:39:48] 2025-11-28 06:39:16,848 | INFO     | chi2: 2.3837714067601916
[2025-11-28 07:39:48] 2025-11-28 06:39:16,848 | INFO     | current chi2=2.3837714067601916 (change=0.06612375678729275 %)
[2025-11-28 07:39:48] 2025-11-28 06:39:16,848 | INFO     | right removable region: 472
[2025-11-28 07:39:48] 2025-11-28 06:39:16,848 | INFO     | sum of square deviations: 33865712179.5
[2025-11-28 07:39:48] 2025-11-28 06:39:16,850 | INFO     | sum of deviations: 69061759084.99995
[2025-11-28 07:39:48] 2025-11-28 06:39:16,850 | INFO     | mean x: 1764297343.5
[2025-11-28 07:39:48] 2025-11-28 06:39:16,850 | INFO     | mean y: 2209232.627615063
[2025-11-28 07:39:48] 2025-11-28 06:39:16,850 | INFO     | intersect: -3595691719.3818746
[2025-11-28 07:39:48] 2025-11-28 06:39:16,851 | INFO     | chi2: 2.0301514052370697
[2025-11-28 07:39:48] 2025-11-28 06:39:16,851 | INFO     | current chi2=2.0301514052370697 (change=50.57087598999497 %)
[2025-11-28 07:39:48] 2025-11-28 06:39:16,851 | INFO     | sum of square deviations: 32814055252.0
[2025-11-28 07:39:48] 2025-11-28 06:39:16,853 | INFO     | sum of deviations: 43747004854.00003
[2025-11-28 07:39:48] 2025-11-28 06:39:16,853 | INFO     | mean x: 1764297496.0
[2025-11-28 07:39:48] 2025-11-28 06:39:16,853 | INFO     | mean y: 2212886.198731501
[2025-11-28 07:39:48] 2025-11-28 06:39:16,853 | INFO     | intersect: -2349911242.583183
[2025-11-28 07:39:48] 2025-11-28 06:39:16,853 | INFO     | chi2: 1.8012611991191156
[2025-11-28 07:39:48] 2025-11-28 06:39:16,853 | INFO     | current chi2=1.8012611991191156 (change=11.274538713097881 %)
[2025-11-28 07:39:48] 2025-11-28 06:39:16,853 | INFO     | left removable region: 20
[2025-11-28 07:39:48] 2025-11-28 06:39:16,853 | INFO     | sum of square deviations: 28634631773.0
[2025-11-28 07:39:48] 2025-11-28 06:39:16,855 | INFO     | sum of deviations: 108922462753.49998
[2025-11-28 07:39:48] 2025-11-28 06:39:16,855 | INFO     | mean x: 1764297465.5
[2025-11-28 07:39:48] 2025-11-28 06:39:16,855 | INFO     | mean y: 2226845.953539823
[2025-11-28 07:39:48] 2025-11-28 06:39:16,855 | INFO     | intersect: -6708934187.841192
[2025-11-28 07:39:48] 2025-11-28 06:39:16,855 | INFO     | chi2: 0.05860451786400781
[2025-11-28 07:39:48] 2025-11-28 06:39:16,855 | INFO     | current memory leak: 3.80 B/s (using 452 data points, chi2=0.06)
[2025-11-28 07:39:48] 2025-11-28 06:39:16,855 | INFO     | could have reported an average CPU frequency of 3936 MHz (20 samples)
[2025-11-28 07:39:48] 2025-11-28 06:39:16,855 | INFO     | ..............................
[2025-11-28 07:39:48] 2025-11-28 06:39:16,855 | INFO     | . Timing measurements:
[2025-11-28 07:39:48] 2025-11-28 06:39:16,855 | INFO     | . get job = 0 s
[2025-11-28 07:39:48] 2025-11-28 06:39:16,855 | INFO     | . initial setup = 1 s
[2025-11-28 07:39:48] 2025-11-28 06:39:16,855 | INFO     | . payload setup = 3 s
[2025-11-28 07:39:48] 2025-11-28 06:39:16,855 | INFO     | . stage-in = 0 s
[2025-11-28 07:39:48] 2025-11-28 06:39:16,855 | INFO     | . payload execution = 29454 s
[2025-11-28 07:39:48] 2025-11-28 06:39:16,855 | INFO     | . stage-out = 5 s
[2025-11-28 07:39:48] 2025-11-28 06:39:16,856 | INFO     | . log creation = 0 s
[2025-11-28 07:39:48] 2025-11-28 06:39:16,856 | INFO     | ..............................
[2025-11-28 07:39:48] 2025-11-28 06:39:17,230 | INFO     | 
[2025-11-28 07:39:48] 2025-11-28 06:39:17,230 | INFO     | job summary report
[2025-11-28 07:39:48] 2025-11-28 06:39:17,231 | INFO     | --------------------------------------------------
[2025-11-28 07:39:48] 2025-11-28 06:39:17,231 | INFO     | PanDA job id: 6895334462
[2025-11-28 07:39:48] 2025-11-28 06:39:17,231 | INFO     | task id: 47556137
[2025-11-28 07:39:48] 2025-11-28 06:39:17,231 | INFO     | errors: (none)
[2025-11-28 07:39:48] 2025-11-28 06:39:17,231 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 07:39:48] 2025-11-28 06:39:17,231 | INFO     | pilot state: finished 
[2025-11-28 07:39:48] 2025-11-28 06:39:17,231 | INFO     | transexitcode: 0
[2025-11-28 07:39:48] 2025-11-28 06:39:17,231 | INFO     | exeerrorcode: 0
[2025-11-28 07:39:48] 2025-11-28 06:39:17,231 | INFO     | exeerrordiag: 
[2025-11-28 07:39:48] 2025-11-28 06:39:17,231 | INFO     | exitcode: 0
[2025-11-28 07:39:48] 2025-11-28 06:39:17,231 | INFO     | exitmsg: OK
[2025-11-28 07:39:48] 2025-11-28 06:39:17,231 | INFO     | cpuconsumptiontime: 86809 s
[2025-11-28 07:39:48] 2025-11-28 06:39:17,231 | INFO     | nevents: 1000
[2025-11-28 07:39:48] 2025-11-28 06:39:17,231 | INFO     | neventsw: 0
[2025-11-28 07:39:48] 2025-11-28 06:39:17,231 | INFO     | pid: 2563659
[2025-11-28 07:39:48] 2025-11-28 06:39:17,231 | INFO     | pgrp: 2563659
[2025-11-28 07:39:48] 2025-11-28 06:39:17,231 | INFO     | corecount: 3
[2025-11-28 07:39:48] 2025-11-28 06:39:17,231 | INFO     | event service: False
[2025-11-28 07:39:48] 2025-11-28 06:39:17,231 | INFO     | sizes: {0: 2284146, 1: 2284345, 3: 2284607, 11: 2284635, 29460: 2323789, 29466: 2332789, 29469: 2332973, 29473: 2333219}
[2025-11-28 07:39:48] 2025-11-28 06:39:17,231 | INFO     | --------------------------------------------------
[2025-11-28 07:39:48] 2025-11-28 06:39:17,231 | INFO     | 
[2025-11-28 07:39:48] 2025-11-28 06:39:17,231 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-28 07:39:48] 2025-11-28 06:39:17,245 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 07:39:48] 2025-11-28 06:39:17,245 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 07:39:48] 2025-11-28 06:39:17,245 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 07:39:48] 2025-11-28 06:39:17,245 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 07:39:48] 2025-11-28 06:39:17,245 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 07:39:48] 2025-11-28 06:39:17,245 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 07:39:48] 2025-11-28 06:39:17,245 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 07:39:48] 2025-11-28 06:39:17,245 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 07:39:48] 2025-11-28 06:39:17,246 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 07:39:48] 2025-11-28 06:39:17,246 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 07:39:48] 2025-11-28 06:39:17,246 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 07:39:48] 2025-11-28 06:39:17,246 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 07:39:48] 2025-11-28 06:39:17,246 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 07:39:48] 2025-11-28 06:39:17,246 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 07:39:48] 2025-11-28 06:39:17,246 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 07:39:48] 2025-11-28 06:39:17,246 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 07:39:48] 2025-11-28 06:39:17,246 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 07:39:48] 2025-11-28 06:39:17,246 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 07:39:48] 2025-11-28 06:39:17,246 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 07:39:48] 2025-11-28 06:39:17,246 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 07:39:48] 2025-11-28 06:39:17,246 | INFO     | job 6895334462 has completed (purged errors)
[2025-11-28 07:39:48] 2025-11-28 06:39:17,246 | INFO     | overall cleanup function is called
[2025-11-28 07:39:48] 2025-11-28 06:39:18,255 | INFO     | --- collectZombieJob: --- 10, [2563659]
[2025-11-28 07:39:48] 2025-11-28 06:39:18,255 | INFO     | zombie collector waiting for pid 2563659
[2025-11-28 07:39:48] 2025-11-28 06:39:18,255 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 07:39:48] 2025-11-28 06:39:18,255 | INFO     | collected zombie processes
[2025-11-28 07:39:48] 2025-11-28 06:39:18,255 | INFO     | will attempt to kill all subprocesses of pid=2563659
[2025-11-28 07:39:48] 2025-11-28 06:39:18,296 | INFO     | process IDs to be killed: [2563659] (in reverse order)
[2025-11-28 07:39:48] 2025-11-28 06:39:18,321 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 07:39:48] 2025-11-28 06:39:18,322 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 07:39:48] 2025-11-28 06:39:18,323 | INFO     | did not find any defunct processes belonging to 2563659
[2025-11-28 07:39:48] 2025-11-28 06:39:18,324 | INFO     | did not find any defunct processes belonging to 2563659
[2025-11-28 07:39:48] 2025-11-28 06:39:18,324 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 07:39:48] 2025-11-28 06:39:18,325 | INFO     | ready for new job
[2025-11-28 07:39:48] 2025-11-28 06:39:18,325 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 07:39:48] 2025-11-28 06:39:18,326 | INFO     | ***************************************
[2025-11-28 07:39:48] 2025-11-28 06:39:18,326 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 07:39:48] 2025-11-28 06:39:18,326 | INFO     | ***************************************
[2025-11-28 07:39:48] 2025-11-28 06:39:18,326 | INFO     | 
[2025-11-28 07:39:48] 2025-11-28 06:39:18,326 | INFO     | architecture information:
[2025-11-28 07:39:48] 2025-11-28 06:39:18,326 | INFO     | executing command: cat /etc/os-release
[2025-11-28 07:39:48] 2025-11-28 06:39:18,336 | INFO     | cat /etc/os-release:
[2025-11-28 07:39:48] NAME="CentOS Linux"
[2025-11-28 07:39:48] VERSION="7 (Core)"
[2025-11-28 07:39:48] ID="centos"
[2025-11-28 07:39:48] ID_LIKE="rhel fedora"
[2025-11-28 07:39:48] VERSION_ID="7"
[2025-11-28 07:39:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 07:39:48] ANSI_COLOR="0;31"
[2025-11-28 07:39:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 07:39:48] HOME_URL="https://www.centos.org/"
[2025-11-28 07:39:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 07:39:48] 
[2025-11-28 07:39:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 07:39:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 07:39:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 07:39:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 07:39:48] 
[2025-11-28 07:39:48] 2025-11-28 06:39:18,336 | INFO     | ***************************************
[2025-11-28 07:39:48] 2025-11-28 06:39:18,839 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-28 07:39:48] 2025-11-28 06:39:18,850 | INFO     | sufficient remaining disk space (266670702592 B)
[2025-11-28 07:39:48] 2025-11-28 06:39:18,850 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 07:39:48] 2025-11-28 06:39:18,850 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 07:39:48] 2025-11-28 06:39:18,850 | INFO     | update_server=False
[2025-11-28 07:39:48] 2025-11-28 06:39:18,850 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 07:39:48] 2025-11-28 06:39:18,851 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 07:39:48] 2025-11-28 06:39:18,851 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 07:39:48] 2025-11-28 06:39:18,851 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 07:39:48] 2025-11-28 06:39:18,851 | INFO     | aborting loop
[2025-11-28 07:39:48] 2025-11-28 06:39:19,607 | INFO     | all payload control threads have been joined
[2025-11-28 07:39:48] 2025-11-28 06:39:19,856 | INFO     | [job] retrieve thread has finished
[2025-11-28 07:39:48] 2025-11-28 06:39:19,856 | INFO     | [job] queue monitor thread has finished
[2025-11-28 07:39:48] 2025-11-28 06:39:19,856 | INFO     | [job] job monitor thread has finished
[2025-11-28 07:39:48] 2025-11-28 06:39:19,897 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 07:39:48] 2025-11-28 06:39:19,919 | INFO     | all data control threads have been joined
[2025-11-28 07:39:48] 2025-11-28 06:39:19,938 | INFO     | [payload] failed_post thread has finished
[2025-11-28 07:39:48] 2025-11-28 06:39:20,277 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 07:39:48] 2025-11-28 06:39:20,455 | INFO     | all job control threads have been joined
[2025-11-28 07:39:48] 2025-11-28 06:39:20,613 | INFO     | [payload] control thread has finished
[2025-11-28 07:39:48] 2025-11-28 06:39:20,820 | INFO     | [payload] validate_post thread has finished
[2025-11-28 07:39:48] 2025-11-28 06:39:20,924 | INFO     | [data] control thread has finished
[2025-11-28 07:39:48] 2025-11-28 06:39:20,969 | INFO     | [job] validate thread has finished
[2025-11-28 07:39:48] 2025-11-28 06:39:20,969 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 07:39:48] 2025-11-28 06:39:20,995 | INFO     | [data] copytool_in thread has finished
[2025-11-28 07:39:48] 2025-11-28 06:39:21,127 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 07:39:48] 2025-11-28 06:39:21,289 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 07:39:48] 2025-11-28 06:39:21,460 | INFO     | [job] control thread has finished
[2025-11-28 07:39:48] 2025-11-28 06:39:22,282 | INFO     | [data] copytool_out thread has finished
[2025-11-28 07:39:48] 2025-11-28 06:39:22,856 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 07:39:48] 2025-11-28 06:39:24,678 | INFO     | [monitor] cgroup control has ended
[2025-11-28 07:39:48] 2025-11-28 06:39:24,875 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140591339857728)>', '<ExcThread(monitor, started 140590033393408)>']
[2025-11-28 07:39:48] 2025-11-28 06:39:29,900 | INFO     | all workflow threads have been joined
[2025-11-28 07:39:48] 2025-11-28 06:39:29,900 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 07:39:48] 2025-11-28 06:39:29,901 | INFO     | traces error code: 0
[2025-11-28 07:39:48] 2025-11-28 06:39:29,901 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 07:39:48] 2025-11-28 06:39:48,844 | INFO     | PID=2557211 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 07:39:48] 2025-11-28 06:39:48,844 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 07:39:48] 2025-11-28 06:39:48,844 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 07:39:48] 2025-11-28 06:39:48,844 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 07:39:48] 2025-11-28 06:39:48,844 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 07:39:48] 2025-11-28 06:39:48,844 | INFO     | [monitor] control thread has ended
[2025-11-28 07:39:48] 2025-11-28 06:39:48,896 [wrapper] ==== pilot stdout END ====
[2025-11-28 07:39:48] 2025-11-28 06:39:48,899 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 07:39:48] 2025-11-28 06:39:48,901 [wrapper] pilotpid: 2557211
[2025-11-28 07:39:48] 2025-11-28 06:39:48,904 [wrapper] Pilot exit status: 0
[2025-11-28 07:39:48] 2025-11-28 06:39:48,912 [wrapper] pandaids: 6895334462
[2025-11-28 07:39:48] 2025-11-28 06:39:48,929 [wrapper] cleanup supervisor_pilot 2615222 2557212
[2025-11-28 07:39:48] 2025-11-28 06:39:48,931 [wrapper] Test setup, not cleaning
[2025-11-28 07:39:48] 2025-11-28 06:39:48,934 [wrapper] apfmon messages muted
[2025-11-28 07:39:48] 2025-11-28 06:39:48,936 [wrapper] ==== wrapper stdout END ====
[2025-11-28 07:39:48] 2025-11-28 06:39:48,939 [wrapper] ==== wrapper stderr END ====
[2025-11-28 07:39:48]  *** Error codes and diagnostics ***
[2025-11-28 07:39:48]     "exeErrorCode": 0,
[2025-11-28 07:39:48]     "exeErrorDiag": "",
[2025-11-28 07:39:48]     "pilotErrorCode": 0,
[2025-11-28 07:39:48]     "pilotErrorDiag": "",
[2025-11-28 07:39:48]  *** Listing of results directory ***
[2025-11-28 07:39:48] total 1302044
[2025-11-28 07:39:48] -rw-r--r-- 1 boinc boinc    576529 Nov 22 04:44 pilot3.tar.gz
[2025-11-28 07:39:48] -rwx------ 1 boinc boinc     36292 Nov 22 04:45 runpilot2-wrapper.sh
[2025-11-28 07:39:48] -rw-r--r-- 1 boinc boinc      5112 Nov 22 04:45 queuedata.json
[2025-11-28 07:39:48] -rw-r--r-- 1 boinc boinc       100 Nov 27 23:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 07:39:48] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 23:27 run_atlas
[2025-11-28 07:39:48] -rw-r--r-- 1 boinc boinc       105 Nov 27 23:27 job.xml
[2025-11-28 07:39:48] -rw-r--r-- 2 boinc boinc 411318937 Nov 27 23:27 EVNT.47483658._000236.pool.root.1
[2025-11-28 07:39:48] -rw-r--r-- 2 boinc boinc    590100 Nov 27 23:27 input.tar.gz
[2025-11-28 07:39:48] -rw-r--r-- 2 boinc boinc     15847 Nov 27 23:27 start_atlas.sh
[2025-11-28 07:39:48] drwxrwx--x 2 boinc boinc      4096 Nov 27 23:27 shared
[2025-11-28 07:39:48] -rw-r--r-- 1 boinc boinc         0 Nov 27 23:27 boinc_setup_complete
[2025-11-28 07:39:48] -rw-r--r-- 1 boinc boinc      6449 Nov 27 23:27 init_data.xml
[2025-11-28 07:39:48] -rw-r--r-- 1 boinc boinc         0 Nov 27 23:27 boinc_lockfile
[2025-11-28 07:39:48] -rw-r--r-- 1 boinc boinc      2785 Nov 27 23:27 pandaJob.out
[2025-11-28 07:39:48] -rw------- 1 boinc boinc    991532 Nov 27 23:27 agis_schedconf.cvmfs.json
[2025-11-28 07:39:48] drwx------ 5 boinc boinc      4096 Nov 27 23:27 pilot3
[2025-11-28 07:39:48] -rw-r--r-- 1 boinc boinc       531 Nov 28 07:34 boinc_task_state.xml
[2025-11-28 07:39:48] -rw------- 1 boinc boinc 907388443 Nov 28 07:38 HITS.47556137._002324.pool.root.1
[2025-11-28 07:39:48] -rw------- 1 boinc boinc      1021 Nov 28 07:39 memory_monitor_summary.json
[2025-11-28 07:39:48] -rw------- 1 boinc boinc   1516240 Nov 28 07:39 agis_ddmendpoints.agis.ALL.json
[2025-11-28 07:39:48] -rw------- 1 boinc boinc   1181210 Nov 28 07:39 log.47556137._002324.job.log.tgz.1
[2025-11-28 07:39:48] -rw------- 1 boinc boinc        95 Nov 28 07:39 pilot_heartbeat.json
[2025-11-28 07:39:48] -rw------- 1 boinc boinc      8555 Nov 28 07:39 heartbeat.json
[2025-11-28 07:39:48] -rw-r--r-- 1 boinc boinc      8192 Nov 28 07:39 boinc_mmap_file
[2025-11-28 07:39:48] -rw-r--r-- 1 boinc boinc        28 Nov 28 07:39 wrapper_checkpoint.txt
[2025-11-28 07:39:48] -rw------- 1 boinc boinc       747 Nov 28 07:39 pilotlog.txt
[2025-11-28 07:39:48] -rw------- 1 boinc boinc   4152856 Nov 28 07:39 log.47556137._002324.job.log.1
[2025-11-28 07:39:48] -rw------- 1 boinc boinc       353 Nov 28 07:39 output.list
[2025-11-28 07:39:48] -rw-r--r-- 1 boinc boinc       620 Nov 28 07:39 runtime_log
[2025-11-28 07:39:48] -rw------- 1 boinc boinc   5355520 Nov 28 07:39 result.tar.gz
[2025-11-28 07:39:48] -rw-r--r-- 1 boinc boinc      8903 Nov 28 07:39 runtime_log.err
[2025-11-28 07:39:48] -rw------- 1 boinc boinc       666 Nov 28 07:39 O2ELDmijtg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmhvHKDmwgUHrn.diag
[2025-11-28 07:39:48] -rw-r--r-- 1 boinc boinc     21385 Nov 28 07:39 stderr.txt
[2025-11-28 07:39:48] HITS file was successfully produced:
[2025-11-28 07:39:48] -rw------- 1 boinc boinc 907388443 Nov 28 07:38 shared/HITS.pool.root.1
[2025-11-28 07:39:48]  *** Contents of shared directory: ***
[2025-11-28 07:39:49] total 1293640
[2025-11-28 07:39:49] -rw-r--r-- 2 boinc boinc 411318937 Nov 27 23:27 ATLAS.root_0
[2025-11-28 07:39:49] -rw-r--r-- 2 boinc boinc    590100 Nov 27 23:27 input.tar.gz
[2025-11-28 07:39:49] -rw-r--r-- 2 boinc boinc     15847 Nov 27 23:27 start_atlas.sh
[2025-11-28 07:39:49] -rw------- 1 boinc boinc 907388443 Nov 28 07:38 HITS.pool.root.1
[2025-11-28 07:39:49] -rw------- 1 boinc boinc   5355520 Nov 28 07:39 result.tar.gz
07:39:50 (2553483): run_atlas exited; CPU time 86824.190556
07:39:50 (2553483): called boinc_finish(0)

</stderr_txt>
]]>

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