Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:25:02 (3596809): wrapper (7.7.26015): starting
06:25:02 (3596809): wrapper: running run_atlas (--nthreads 3)
[2025-11-24 06:25:02] Arguments: --nthreads 3
[2025-11-24 06:25:02] Threads: 3
[2025-11-24 06:25:02] Checking for CVMFS
[2025-11-24 06:25:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 06:25:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 06:25:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 06:25:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 06:25:02] 2.9.2.0 2886065 5218 85812 153235 2 81 6650819 36864000 0 130560 0 1938754 99.976 174748 5574 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-24 06:25:02] CVMFS is ok
[2025-11-24 06:25:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 06:25:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 06:25:02] Further information can be found at the LHC@home message board.
[2025-11-24 06:25:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 06:25:02] Checking for apptainer binary...
[2025-11-24 06:25:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 06:25:02] Running /usr/bin/apptainer --version
[2025-11-24 06:25:02] apptainer version 1.4.1-1.1
[2025-11-24 06:25:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 06:25:02] thA330a
[2025-11-24 06:25:02] apptainer works
[2025-11-24 06:25:02] Set ATHENA_PROC_NUMBER=3
[2025-11-24 06:25:02] Set ATHENA_CORE_NUMBER=3
[2025-11-24 06:25:02] Starting ATLAS job with PandaID=6895351824
[2025-11-24 06:25:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
12:49:57 (3650645): wrapper (7.7.26015): starting
12:49:57 (3650645): wrapper: running run_atlas (--nthreads 3)
[2025-11-24 12:49:57] Arguments: --nthreads 3
[2025-11-24 12:49:57] Threads: 3
[2025-11-24 12:49:57] This job has been restarted, cleaning up previous attempt
[2025-11-24 12:49:57] Checking for CVMFS
[2025-11-24 12:49:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 12:49:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 12:49:59] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 12:49:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 12:49:59] 2.9.2.0 3650771 0 30012 153244 3 1 6683993 36864000 0 130560 0 0 100.000 0 0 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-24 12:49:59] CVMFS is ok
[2025-11-24 12:49:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 12:49:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 12:49:59] Further information can be found at the LHC@home message board.
[2025-11-24 12:49:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 12:49:59] Checking for apptainer binary...
[2025-11-24 12:49:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 12:49:59] Running /usr/bin/apptainer --version
[2025-11-24 12:49:59] apptainer version 1.4.1-1.1
[2025-11-24 12:49:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 12:49:59] thA330a
[2025-11-24 12:49:59] apptainer works
[2025-11-24 12:49:59] Set ATHENA_PROC_NUMBER=3
[2025-11-24 12:49:59] Set ATHENA_CORE_NUMBER=3
[2025-11-24 12:49:59] Starting ATLAS job with PandaID=6895351824
[2025-11-24 12:49:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 20:37:47]  *** The last 200 lines of the pilot log: ***
[2025-11-24 20:37:47] 2025-11-24 19:37:07,267 | INFO     | aborting loop
[2025-11-24 20:37:47] 2025-11-24 19:37:07,490 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 20:37:47] 2025-11-24 19:37:07,557 | INFO     | [job] retrieve thread has finished
[2025-11-24 20:37:47] 2025-11-24 19:37:07,560 | INFO     | [job] queue monitor thread has finished
[2025-11-24 20:37:47] 2025-11-24 19:37:07,589 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 20:37:47] 2025-11-24 19:37:07,680 | INFO     | [data] copytool_in thread has finished
[2025-11-24 20:37:47] 2025-11-24 19:37:07,830 | INFO     | [data] control thread has finished
[2025-11-24 20:37:47] 2025-11-24 19:37:07,837 | INFO     | [payload] failed_post thread has finished
[2025-11-24 20:37:47] 2025-11-24 19:37:08,009 | INFO     | all payload control threads have been joined
[2025-11-24 20:37:47] 2025-11-24 19:37:08,193 | INFO     | [job] validate thread has finished
[2025-11-24 20:37:47] 2025-11-24 19:37:08,245 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 20:37:47] 2025-11-24 19:37:08,271 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 20:37:47] 2025-11-24 19:37:08,273 | INFO     | [job] job monitor thread has finished
[2025-11-24 20:37:47] 2025-11-24 19:37:08,273 | INFO     | [job] control thread has finished
[2025-11-24 20:37:47] 2025-11-24 19:37:08,444 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 20:37:47] 2025-11-24 19:37:08,622 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 20:37:47] 2025-11-24 19:37:09,013 | INFO     | [payload] control thread has finished
[2025-11-24 20:37:47] 2025-11-24 19:37:09,081 | INFO     | [payload] validate_post thread has finished
[2025-11-24 20:37:47] 2025-11-24 19:37:09,496 | INFO     | [data] copytool_out thread has finished
[2025-11-24 20:37:47] 2025-11-24 19:37:11,596 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 20:37:47] 2025-11-24 19:37:41,183 | INFO     | [monitor] cgroup control has ended
[2025-11-24 20:37:47] 2025-11-24 19:37:42,359 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139673709832000)>', '<ExcThread(monitor, started 139672864941824)>']
[2025-11-24 20:37:47] 2025-11-24 19:37:42,735 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 20:37:47] 2025-11-24 19:37:42,736 | INFO     | [monitor] control thread has ended
[2025-11-24 20:37:47] 2025-11-24 19:37:47,385 | INFO     | all workflow threads have been joined
[2025-11-24 20:37:47] 2025-11-24 19:37:47,385 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 20:37:47] 2025-11-24 19:37:47,385 | INFO     | traces error code: 0
[2025-11-24 20:37:47] 2025-11-24 19:37:47,386 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 20:37:47] 2025-11-24 19:37:47,436 [wrapper] ==== pilot stdout END ====
[2025-11-24 20:37:47] 2025-11-24 19:37:47,438 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 20:37:47] 2025-11-24 19:37:47,440 [wrapper] pilotpid: 3654849
[2025-11-24 20:37:47] 2025-11-24 19:37:47,443 [wrapper] Pilot exit status: 0
[2025-11-24 20:37:47] 2025-11-24 19:37:47,450 [wrapper] pandaids: 6895351824 6895351824
[2025-11-24 20:37:47] 2025-11-24 19:37:47,467 [wrapper] cleanup supervisor_pilot 3712686 3654850
[2025-11-24 20:37:47] 2025-11-24 19:37:47,469 [wrapper] Test setup, not cleaning
[2025-11-24 20:37:47] 2025-11-24 19:37:47,472 [wrapper] apfmon messages muted
[2025-11-24 20:37:47] 2025-11-24 19:37:47,474 [wrapper] ==== wrapper stdout END ====
[2025-11-24 20:37:47] 2025-11-24 19:37:47,476 [wrapper] ==== wrapper stderr END ====
[2025-11-24 20:37:47]  *** Error codes and diagnostics ***
[2025-11-24 20:37:47]     "exeErrorCode": 0,
[2025-11-24 20:37:47]     "exeErrorDiag": "",
[2025-11-24 20:37:47]     "pilotErrorCode": 0,
[2025-11-24 20:37:47]     "pilotErrorDiag": "",
[2025-11-24 20:37:47]  *** Listing of results directory ***
[2025-11-24 20:37:47] total 1708124
[2025-11-24 20:37:47] drwx------ 5 boinc boinc      4096 Nov  5 18:16 pilot3
[2025-11-24 20:37:47] -rw-r--r-- 1 boinc boinc    576529 Nov 23 02:11 pilot3.tar.gz
[2025-11-24 20:37:47] -rwx------ 1 boinc boinc     36292 Nov 23 02:17 runpilot2-wrapper.sh
[2025-11-24 20:37:47] -rw-r--r-- 1 boinc boinc      5112 Nov 23 02:17 queuedata.json
[2025-11-24 20:37:47] -rw-r--r-- 1 boinc boinc       100 Nov 24 06:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 20:37:47] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 06:25 run_atlas
[2025-11-24 20:37:47] -rw-r--r-- 1 boinc boinc       105 Nov 24 06:25 job.xml
[2025-11-24 20:37:47] -rw-r--r-- 3 boinc boinc 410909674 Nov 24 06:25 EVNT.47483658._000568.pool.root.1
[2025-11-24 20:37:47] -rw-r--r-- 3 boinc boinc 410909674 Nov 24 06:25 ATLAS.root_0
[2025-11-24 20:37:47] -rw-r--r-- 2 boinc boinc    590104 Nov 24 06:25 input.tar.gz
[2025-11-24 20:37:47] -rw-r--r-- 2 boinc boinc     15847 Nov 24 06:25 start_atlas.sh
[2025-11-24 20:37:47] drwxrwx--x 2 boinc boinc      4096 Nov 24 06:25 shared
[2025-11-24 20:37:47] -rw-r--r-- 1 boinc boinc         0 Nov 24 06:25 boinc_setup_complete
[2025-11-24 20:37:47] -rw-r--r-- 1 boinc boinc         0 Nov 24 06:25 boinc_lockfile
[2025-11-24 20:37:47] -rw-r--r-- 1 boinc boinc      6448 Nov 24 12:49 init_data.xml
[2025-11-24 20:37:47] -rw-r--r-- 1 boinc boinc      2783 Nov 24 12:49 pandaJob.out
[2025-11-24 20:37:47] -rw------- 1 boinc boinc    989803 Nov 24 12:50 agis_schedconf.cvmfs.json
[2025-11-24 20:37:47] -rw-r--r-- 1 boinc boinc       533 Nov 24 20:32 boinc_task_state.xml
[2025-11-24 20:37:47] -rw------- 1 boinc boinc        96 Nov 24 20:36 pilot_heartbeat.json
[2025-11-24 20:37:47] -rw------- 1 boinc boinc 913201619 Nov 24 20:36 HITS.47556137._005631.pool.root.1
[2025-11-24 20:37:47] -rw------- 1 boinc boinc      1027 Nov 24 20:36 memory_monitor_summary.json
[2025-11-24 20:37:47] -rw------- 1 boinc boinc   1516227 Nov 24 20:36 agis_ddmendpoints.agis.ALL.json
[2025-11-24 20:37:47] -rw------- 1 boinc boinc   1152910 Nov 24 20:36 log.47556137._005631.job.log.tgz.1
[2025-11-24 20:37:47] -rw------- 1 boinc boinc      8565 Nov 24 20:37 heartbeat.json
[2025-11-24 20:37:47] -rw-r--r-- 1 boinc boinc      8192 Nov 24 20:37 boinc_mmap_file
[2025-11-24 20:37:47] -rw-r--r-- 1 boinc boinc        29 Nov 24 20:37 wrapper_checkpoint.txt
[2025-11-24 20:37:47] -rw------- 1 boinc boinc      4556 Nov 24 20:37 pilotlog.txt
[2025-11-24 20:37:47] -rw------- 1 boinc boinc   3944519 Nov 24 20:37 log.47556137._005631.job.log.1
[2025-11-24 20:37:47] -rw------- 1 boinc boinc       353 Nov 24 20:37 output.list
[2025-11-24 20:37:47] -rw-r--r-- 1 boinc boinc       620 Nov 24 20:37 runtime_log
[2025-11-24 20:37:47] -rw------- 1 boinc boinc   5120000 Nov 24 20:37 result.tar.gz
[2025-11-24 20:37:47] -rw-r--r-- 1 boinc boinc      8988 Nov 24 20:37 runtime_log.err
[2025-11-24 20:37:47] -rw------- 1 boinc boinc       791 Nov 24 20:37 0BuKDmZuDh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPWKKDmVQpuNn.diag
[2025-11-24 20:37:47] -rw-r--r-- 1 boinc boinc      8300 Nov 24 20:37 stderr.txt
[2025-11-24 20:37:47] HITS file was successfully produced:
[2025-11-24 20:37:47] -rw------- 1 boinc boinc 913201619 Nov 24 20:36 shared/HITS.pool.root.1
[2025-11-24 20:37:47]  *** Contents of shared directory: ***
[2025-11-24 20:37:47] total 1298680
[2025-11-24 20:37:47] -rw-r--r-- 3 boinc boinc 410909674 Nov 24 06:25 ATLAS.root_0
[2025-11-24 20:37:47] -rw-r--r-- 2 boinc boinc    590104 Nov 24 06:25 input.tar.gz
[2025-11-24 20:37:47] -rw-r--r-- 2 boinc boinc     15847 Nov 24 06:25 start_atlas.sh
[2025-11-24 20:37:47] -rw------- 1 boinc boinc 913201619 Nov 24 20:36 HITS.pool.root.1
[2025-11-24 20:37:47] -rw------- 1 boinc boinc   5120000 Nov 24 20:37 result.tar.gz
20:37:49 (3650645): run_atlas exited; CPU time 82569.058617
20:37:49 (3650645): called boinc_finish(0)

</stderr_txt>
]]>

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