Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:46:44 (463): wrapper (7.7.26015): starting
16:46:44 (463): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 16:46:44] Arguments: --nthreads 12
[2025-11-23 16:46:44] Threads: 12
[2025-11-23 16:46:44] Checking for CVMFS
[2025-11-23 16:46:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 16:46:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 16:46:44] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 16:46:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 16:46:44] 2.11.2.0 30551 113861 91704 153221 3 82 13437827 20275201 1 130560 0 50546474 99.915 6256279 28701 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 16:46:44] CVMFS is ok
[2025-11-23 16:46:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 16:46:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 16:46:44] Further information can be found at the LHC@home message board.
[2025-11-23 16:46:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 16:46:44] Checking for apptainer binary...
[2025-11-23 16:46:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 16:46:44] Running /usr/bin/apptainer --version
[2025-11-23 16:46:44] apptainer version 1.3.2-1.el7
[2025-11-23 16:46:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 16:46:46] c-205-16.aglt2.org
[2025-11-23 16:46:46] apptainer works
[2025-11-23 16:46:46] Set ATHENA_PROC_NUMBER=12
[2025-11-23 16:46:46] Set ATHENA_CORE_NUMBER=12
[2025-11-23 16:46:46] Starting ATLAS job with PandaID=6895331997
[2025-11-23 16:46:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 00:03:09]  *** The last 200 lines of the pilot log: ***
[2025-11-24 00:03:09] 2025-11-24 05:02:37,190 | INFO     | monitor loop #1959: job 0:6895331997 is in state 'finished'
[2025-11-24 00:03:09] 2025-11-24 05:02:37,190 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 00:03:09] 2025-11-24 05:02:37,606 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 00:03:09] 2025-11-24 05:02:37,610 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-11-24 00:03:09] 2025-11-24 05:02:37,613 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895331997/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 00:03:09] 2025-11-24 05:02:37,613 | INFO     | extracted standard info from prmon json
[2025-11-24 00:03:09] 2025-11-24 05:02:37,613 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 00:03:09] 2025-11-24 05:02:37,613 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 00:03:09] 2025-11-24 05:02:37,620 | INFO     | fitting pss+swap vs Time
[2025-11-24 00:03:09] 2025-11-24 05:02:37,620 | INFO     | sum of square deviations: 24311166559.289616
[2025-11-24 00:03:09] 2025-11-24 05:02:37,624 | INFO     | sum of deviations: 373669514848.26086
[2025-11-24 00:03:09] 2025-11-24 05:02:37,625 | INFO     | mean x: 1763947474.6915889
[2025-11-24 00:03:09] 2025-11-24 05:02:37,625 | INFO     | mean y: 3418075.10046729
[2025-11-24 00:03:09] 2025-11-24 05:02:37,625 | INFO     | intersect: -27108954154.275642
[2025-11-24 00:03:09] 2025-11-24 05:02:37,626 | INFO     | chi2: 5.957732969161501
[2025-11-24 00:03:09] 2025-11-24 05:02:37,626 | INFO     | sum of square deviations: 23469073454.103848
[2025-11-24 00:03:09] 2025-11-24 05:02:37,630 | INFO     | sum of deviations: 522498042464.1328
[2025-11-24 00:03:09] 2025-11-24 05:02:37,630 | INFO     | mean x: 1763947322.1938534
[2025-11-24 00:03:09] 2025-11-24 05:02:37,630 | INFO     | mean y: 3444994.973995272
[2025-11-24 00:03:09] 2025-11-24 05:02:37,630 | INFO     | intersect: -39267769723.346054
[2025-11-24 00:03:09] 2025-11-24 05:02:37,631 | INFO     | chi2: 3.364840877454413
[2025-11-24 00:03:09] 2025-11-24 05:02:37,631 | INFO     | current chi2=3.364840877454413 (change=43.52145531074406 %)
[2025-11-24 00:03:09] 2025-11-24 05:02:37,631 | INFO     | sum of square deviations: 22646655136.413876
[2025-11-24 00:03:09] 2025-11-24 05:02:37,635 | INFO     | sum of deviations: 586983346645.3188
[2025-11-24 00:03:09] 2025-11-24 05:02:37,635 | INFO     | mean x: 1763947169.6961722
[2025-11-24 00:03:09] 2025-11-24 05:02:37,635 | INFO     | mean y: 3456905.1363636362
[2025-11-24 00:03:09] 2025-11-24 05:02:37,635 | INFO     | intersect: -45716655258.75449
[2025-11-24 00:03:09] 2025-11-24 05:02:37,636 | INFO     | chi2: 2.615428035991414
[2025-11-24 00:03:09] 2025-11-24 05:02:37,636 | INFO     | current chi2=2.615428035991414 (change=22.271865706468382 %)
[2025-11-24 00:03:09] 2025-11-24 05:02:37,636 | INFO     | right removable region: 417
[2025-11-24 00:03:09] 2025-11-24 05:02:37,637 | INFO     | sum of square deviations: 23469023434.103848
[2025-11-24 00:03:09] 2025-11-24 05:02:37,640 | INFO     | sum of deviations: 226991440087.60236
[2025-11-24 00:03:09] 2025-11-24 05:02:37,641 | INFO     | mean x: 1763947627.1938534
[2025-11-24 00:03:09] 2025-11-24 05:02:37,641 | INFO     | mean y: 3444564.0780141843
[2025-11-24 00:03:09] 2025-11-24 05:02:37,641 | INFO     | intersect: -17057385140.23776
[2025-11-24 00:03:09] 2025-11-24 05:02:37,641 | INFO     | chi2: 3.5004859936901243
[2025-11-24 00:03:09] 2025-11-24 05:02:37,641 | INFO     | current chi2=3.5004859936901243 (change=41.24466450897703 %)
[2025-11-24 00:03:09] 2025-11-24 05:02:37,642 | INFO     | sum of square deviations: 22646555096.41387
[2025-11-24 00:03:09] 2025-11-24 05:02:37,646 | INFO     | sum of deviations: 194809708182.64838
[2025-11-24 00:03:09] 2025-11-24 05:02:37,646 | INFO     | mean x: 1763947779.6961722
[2025-11-24 00:03:09] 2025-11-24 05:02:37,646 | INFO     | mean y: 3450524.2177033494
[2025-11-24 00:03:09] 2025-11-24 05:02:37,646 | INFO     | intersect: -15170343050.525902
[2025-11-24 00:03:09] 2025-11-24 05:02:37,646 | INFO     | chi2: 3.447296946675547
[2025-11-24 00:03:09] 2025-11-24 05:02:37,647 | INFO     | current chi2=3.447296946675547 (change=1.5194760701929482 %)
[2025-11-24 00:03:09] 2025-11-24 05:02:37,647 | INFO     | left removable region: 20
[2025-11-24 00:03:09] 2025-11-24 05:02:37,647 | INFO     | sum of square deviations: 19401898331.062847
[2025-11-24 00:03:09] 2025-11-24 05:02:37,651 | INFO     | sum of deviations: 365816729605.5788
[2025-11-24 00:03:09] 2025-11-24 05:02:37,651 | INFO     | mean x: 1763947749.2065492
[2025-11-24 00:03:09] 2025-11-24 05:02:37,651 | INFO     | mean y: 3498595.700251889
[2025-11-24 00:03:09] 2025-11-24 05:02:37,651 | INFO     | intersect: -33255184951.6077
[2025-11-24 00:03:09] 2025-11-24 05:02:37,652 | INFO     | chi2: 0.05878348502733802
[2025-11-24 00:03:09] 2025-11-24 05:02:37,652 | INFO     | current memory leak: 18.85 B/s (using 397 data points, chi2=0.06)
[2025-11-24 00:03:09] 2025-11-24 05:02:37,652 | INFO     | could have reported an average CPU frequency of 2397 MHz (18 samples)
[2025-11-24 00:03:09] 2025-11-24 05:02:37,652 | INFO     | ..............................
[2025-11-24 00:03:09] 2025-11-24 05:02:37,652 | INFO     | . Timing measurements:
[2025-11-24 00:03:09] 2025-11-24 05:02:37,652 | INFO     | . get job = 0 s
[2025-11-24 00:03:09] 2025-11-24 05:02:37,653 | INFO     | . initial setup = 2 s
[2025-11-24 00:03:09] 2025-11-24 05:02:37,653 | INFO     | . payload setup = 7 s
[2025-11-24 00:03:09] 2025-11-24 05:02:37,653 | INFO     | . stage-in = 0 s
[2025-11-24 00:03:09] 2025-11-24 05:02:37,653 | INFO     | . payload execution = 26096 s
[2025-11-24 00:03:09] 2025-11-24 05:02:37,653 | INFO     | . stage-out = 3 s
[2025-11-24 00:03:09] 2025-11-24 05:02:37,653 | INFO     | . log creation = 0 s
[2025-11-24 00:03:09] 2025-11-24 05:02:37,653 | INFO     | ..............................
[2025-11-24 00:03:09] 2025-11-24 05:02:37,734 | INFO     | 
[2025-11-24 00:03:09] 2025-11-24 05:02:37,735 | INFO     | job summary report
[2025-11-24 00:03:09] 2025-11-24 05:02:37,735 | INFO     | --------------------------------------------------
[2025-11-24 00:03:09] 2025-11-24 05:02:37,735 | INFO     | PanDA job id: 6895331997
[2025-11-24 00:03:09] 2025-11-24 05:02:37,735 | INFO     | task id: 47556137
[2025-11-24 00:03:09] 2025-11-24 05:02:37,735 | INFO     | errors: (none)
[2025-11-24 00:03:09] 2025-11-24 05:02:37,735 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 00:03:09] 2025-11-24 05:02:37,736 | INFO     | pilot state: finished 
[2025-11-24 00:03:09] 2025-11-24 05:02:37,736 | INFO     | transexitcode: 0
[2025-11-24 00:03:09] 2025-11-24 05:02:37,736 | INFO     | exeerrorcode: 0
[2025-11-24 00:03:09] 2025-11-24 05:02:37,736 | INFO     | exeerrordiag: 
[2025-11-24 00:03:09] 2025-11-24 05:02:37,736 | INFO     | exitcode: 0
[2025-11-24 00:03:09] 2025-11-24 05:02:37,736 | INFO     | exitmsg: OK
[2025-11-24 00:03:09] 2025-11-24 05:02:37,737 | INFO     | cpuconsumptiontime: 298143 s
[2025-11-24 00:03:09] 2025-11-24 05:02:37,737 | INFO     | nevents: 1000
[2025-11-24 00:03:09] 2025-11-24 05:02:37,737 | INFO     | neventsw: 0
[2025-11-24 00:03:09] 2025-11-24 05:02:37,737 | INFO     | pid: 11664
[2025-11-24 00:03:09] 2025-11-24 05:02:37,737 | INFO     | pgrp: 11664
[2025-11-24 00:03:09] 2025-11-24 05:02:37,737 | INFO     | corecount: 12
[2025-11-24 00:03:09] 2025-11-24 05:02:37,737 | INFO     | event service: False
[2025-11-24 00:03:09] 2025-11-24 05:02:37,738 | INFO     | sizes: {0: 2298750, 5: 2299012, 11: 2299068, 26107: 2336414, 26112: 2345408, 26114: 2345464, 26120: 2345838}
[2025-11-24 00:03:09] 2025-11-24 05:02:37,738 | INFO     | --------------------------------------------------
[2025-11-24 00:03:09] 2025-11-24 05:02:37,738 | INFO     | 
[2025-11-24 00:03:09] 2025-11-24 05:02:37,738 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 00:03:09] 2025-11-24 05:02:37,764 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 00:03:09] 2025-11-24 05:02:37,765 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 00:03:09] 2025-11-24 05:02:37,765 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 00:03:09] 2025-11-24 05:02:37,765 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 00:03:09] 2025-11-24 05:02:37,765 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 00:03:09] 2025-11-24 05:02:37,765 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 00:03:09] 2025-11-24 05:02:37,765 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 00:03:09] 2025-11-24 05:02:37,766 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 00:03:09] 2025-11-24 05:02:37,766 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 00:03:09] 2025-11-24 05:02:37,766 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 00:03:09] 2025-11-24 05:02:37,766 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 00:03:09] 2025-11-24 05:02:37,766 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 00:03:09] 2025-11-24 05:02:37,767 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 00:03:09] 2025-11-24 05:02:37,767 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 00:03:09] 2025-11-24 05:02:37,767 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 00:03:09] 2025-11-24 05:02:37,767 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 00:03:09] 2025-11-24 05:02:37,767 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 00:03:09] 2025-11-24 05:02:37,767 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 00:03:09] 2025-11-24 05:02:37,768 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 00:03:09] 2025-11-24 05:02:37,768 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 00:03:09] 2025-11-24 05:02:37,768 | INFO     | job 6895331997 has completed (purged errors)
[2025-11-24 00:03:09] 2025-11-24 05:02:37,768 | INFO     | overall cleanup function is called
[2025-11-24 00:03:09] 2025-11-24 05:02:38,785 | INFO     | --- collectZombieJob: --- 10, [11664]
[2025-11-24 00:03:09] 2025-11-24 05:02:38,785 | INFO     | zombie collector waiting for pid 11664
[2025-11-24 00:03:09] 2025-11-24 05:02:38,785 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 00:03:09] 2025-11-24 05:02:38,785 | INFO     | collected zombie processes
[2025-11-24 00:03:09] 2025-11-24 05:02:38,785 | INFO     | will attempt to kill all subprocesses of pid=11664
[2025-11-24 00:03:09] 2025-11-24 05:02:38,881 | INFO     | process IDs to be killed: [11664] (in reverse order)
[2025-11-24 00:03:09] 2025-11-24 05:02:38,932 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 00:03:09] 2025-11-24 05:02:38,932 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 00:03:09] 2025-11-24 05:02:38,936 | INFO     | did not find any defunct processes belonging to 11664
[2025-11-24 00:03:09] 2025-11-24 05:02:38,940 | INFO     | did not find any defunct processes belonging to 11664
[2025-11-24 00:03:09] 2025-11-24 05:02:38,942 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 00:03:09] 2025-11-24 05:02:38,943 | INFO     | ready for new job
[2025-11-24 00:03:09] 2025-11-24 05:02:38,943 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 00:03:09] 2025-11-24 05:02:38,945 | INFO     | ***************************************
[2025-11-24 00:03:09] 2025-11-24 05:02:38,945 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 00:03:09] 2025-11-24 05:02:38,945 | INFO     | ***************************************
[2025-11-24 00:03:09] 2025-11-24 05:02:38,945 | INFO     | 
[2025-11-24 00:03:09] 2025-11-24 05:02:38,946 | INFO     | architecture information:
[2025-11-24 00:03:09] 2025-11-24 05:02:38,946 | INFO     | executing command: cat /etc/os-release
[2025-11-24 00:03:09] 2025-11-24 05:02:38,961 | INFO     | cat /etc/os-release:
[2025-11-24 00:03:09] NAME="CentOS Linux"
[2025-11-24 00:03:09] VERSION="7 (Core)"
[2025-11-24 00:03:09] ID="centos"
[2025-11-24 00:03:09] ID_LIKE="rhel fedora"
[2025-11-24 00:03:09] VERSION_ID="7"
[2025-11-24 00:03:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 00:03:09] ANSI_COLOR="0;31"
[2025-11-24 00:03:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 00:03:09] HOME_URL="https://www.centos.org/"
[2025-11-24 00:03:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 00:03:09] 
[2025-11-24 00:03:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 00:03:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 00:03:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 00:03:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 00:03:09] 
[2025-11-24 00:03:09] 2025-11-24 05:02:38,962 | INFO     | ***************************************
[2025-11-24 00:03:09] 2025-11-24 05:02:39,464 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 00:03:09] 2025-11-24 05:02:39,481 | INFO     | sufficient remaining disk space (28379709440 B)
[2025-11-24 00:03:09] 2025-11-24 05:02:39,481 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 00:03:09] 2025-11-24 05:02:39,482 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 00:03:09] 2025-11-24 05:02:39,482 | INFO     | update_server=False
[2025-11-24 00:03:09] 2025-11-24 05:02:39,482 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 00:03:09] 2025-11-24 05:02:39,482 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 00:03:09] 2025-11-24 05:02:39,693 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 00:03:09] 2025-11-24 05:02:39,693 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 00:03:09] 2025-11-24 05:02:39,693 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 00:03:09] 2025-11-24 05:02:39,694 | INFO     | will abort loop
[2025-11-24 00:03:09] 2025-11-24 05:02:40,041 | INFO     | all job control threads have been joined
[2025-11-24 00:03:09] 2025-11-24 05:02:40,394 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 00:03:09] 2025-11-24 05:02:40,449 | INFO     | all data control threads have been joined
[2025-11-24 00:03:09] 2025-11-24 05:02:40,488 | INFO     | [job] retrieve thread has finished
[2025-11-24 00:03:09] 2025-11-24 05:02:40,488 | INFO     | [job] queue monitor thread has finished
[2025-11-24 00:03:09] 2025-11-24 05:02:40,494 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 00:03:09] 2025-11-24 05:02:40,522 | INFO     | [job] validate thread has finished
[2025-11-24 00:03:09] 2025-11-24 05:02:40,590 | INFO     | all payload control threads have been joined
[2025-11-24 00:03:09] 2025-11-24 05:02:40,699 | INFO     | [job] job monitor thread has finished
[2025-11-24 00:03:09] 2025-11-24 05:02:40,875 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 00:03:09] 2025-11-24 05:02:41,005 | INFO     | [payload] failed_post thread has finished
[2025-11-24 00:03:09] 2025-11-24 05:02:41,047 | INFO     | [job] control thread has finished
[2025-11-24 00:03:09] 2025-11-24 05:02:41,267 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 00:03:09] 2025-11-24 05:02:41,277 | INFO     | [data] copytool_in thread has finished
[2025-11-24 00:03:09] 2025-11-24 05:02:41,454 | INFO     | [data] control thread has finished
[2025-11-24 00:03:09] 2025-11-24 05:02:41,596 | INFO     | [payload] control thread has finished
[2025-11-24 00:03:09] 2025-11-24 05:02:41,658 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 00:03:09] 2025-11-24 05:02:41,975 | INFO     | [payload] validate_post thread has finished
[2025-11-24 00:03:09] 2025-11-24 05:02:42,397 | INFO     | [data] copytool_out thread has finished
[2025-11-24 00:03:09] 2025-11-24 05:02:42,551 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 00:03:09] 2025-11-24 05:02:43,474 | INFO     | [monitor] cgroup control has ended
[2025-11-24 00:03:09] 2025-11-24 05:02:46,557 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 00:03:09] 2025-11-24 05:02:47,286 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140710966318912)>', '<ExcThread(monitor, started 140710233761536)>']
[2025-11-24 00:03:09] 2025-11-24 05:02:52,311 | INFO     | all workflow threads have been joined
[2025-11-24 00:03:09] 2025-11-24 05:02:52,311 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 00:03:09] 2025-11-24 05:02:52,319 | INFO     | traces error code: 0
[2025-11-24 00:03:09] 2025-11-24 05:02:52,320 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 00:03:09] 2025-11-24 05:03:09,152 | INFO     | PID=4402 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-24 00:03:09] 2025-11-24 05:03:09,152 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 00:03:09] 2025-11-24 05:03:09,152 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 00:03:09] 2025-11-24 05:03:09,152 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 00:03:09] 2025-11-24 05:03:09,152 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 00:03:09] 2025-11-24 05:03:09,152 | INFO     | [monitor] control thread has ended
[2025-11-24 00:03:09] 2025-11-24 05:03:09,239 [wrapper] ==== pilot stdout END ====
[2025-11-24 00:03:09] 2025-11-24 05:03:09,244 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 00:03:09] 2025-11-24 05:03:09,249 [wrapper] pilotpid: 4402
[2025-11-24 00:03:09] 2025-11-24 05:03:09,252 [wrapper] Pilot exit status: 0
[2025-11-24 00:03:09] 2025-11-24 05:03:09,266 [wrapper] pandaids: 6895331997
[2025-11-24 00:03:09] 2025-11-24 05:03:09,308 [wrapper] cleanup supervisor_pilot 26978 4403
[2025-11-24 00:03:09] 2025-11-24 05:03:09,312 [wrapper] Test setup, not cleaning
[2025-11-24 00:03:09] 2025-11-24 05:03:09,316 [wrapper] apfmon messages muted
[2025-11-24 00:03:09] 2025-11-24 05:03:09,320 [wrapper] ==== wrapper stdout END ====
[2025-11-24 00:03:09] 2025-11-24 05:03:09,324 [wrapper] ==== wrapper stderr END ====
[2025-11-24 00:03:09]  *** Error codes and diagnostics ***
[2025-11-24 00:03:09]     "exeErrorCode": 0,
[2025-11-24 00:03:09]     "exeErrorDiag": "",
[2025-11-24 00:03:09]     "pilotErrorCode": 0,
[2025-11-24 00:03:09]     "pilotErrorDiag": "",
[2025-11-24 00:03:09]  *** Listing of results directory ***
[2025-11-24 00:03:09] total 1317952
[2025-11-24 00:03:09] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 18:51 pilot3.tar.gz
[2025-11-24 00:03:09] -rwx------ 1 boincer umatlas     36292 Nov 21 19:04 runpilot2-wrapper.sh
[2025-11-24 00:03:09] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 19:04 queuedata.json
[2025-11-24 00:03:09] -rw-r--r-- 1 boincer umatlas       100 Nov 23 16:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 00:03:09] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 16:46 run_atlas
[2025-11-24 00:03:09] -rw-r--r-- 1 boincer umatlas       105 Nov 23 16:46 job.xml
[2025-11-24 00:03:09] -rw-r--r-- 2 boincer umatlas 410505383 Nov 23 16:46 EVNT.47483658._000186.pool.root.1
[2025-11-24 00:03:09] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 16:46 start_atlas.sh
[2025-11-24 00:03:09] drwxrwx--x 2 boincer umatlas      4096 Nov 23 16:46 shared
[2025-11-24 00:03:09] -rw-r--r-- 2 boincer umatlas    590098 Nov 23 16:46 input.tar.gz
[2025-11-24 00:03:09] -rw-r--r-- 1 boincer umatlas         0 Nov 23 16:46 boinc_lockfile
[2025-11-24 00:03:09] -rw-r--r-- 1 boincer umatlas      2782 Nov 23 16:46 pandaJob.out
[2025-11-24 00:03:09] -rw------- 1 boincer umatlas        57 Nov 23 16:46 setup.sh.local
[2025-11-24 00:03:09] -rw------- 1 boincer umatlas    989786 Nov 23 16:46 agis_schedconf.cvmfs.json
[2025-11-24 00:03:09] drwx------ 5 boincer umatlas      4096 Nov 23 16:47 pilot3
[2025-11-24 00:03:09] -rw-r--r-- 1 boincer umatlas       532 Nov 23 23:52 boinc_task_state.xml
[2025-11-24 00:03:09] -rw------- 1 boincer umatlas 923497012 Nov 24 00:01 HITS.47556137._001851.pool.root.1
[2025-11-24 00:03:09] -rw------- 1 boincer umatlas        95 Nov 24 00:02 pilot_heartbeat.json
[2025-11-24 00:03:09] -rw------- 1 boincer umatlas      1061 Nov 24 00:02 memory_monitor_summary.json
[2025-11-24 00:03:09] -rw------- 1 boincer umatlas   1526164 Nov 24 00:02 agis_ddmendpoints.agis.ALL.json
[2025-11-24 00:03:09] -rw------- 1 boincer umatlas   2172517 Nov 24 00:02 log.47556137._001851.job.log.tgz.1
[2025-11-24 00:03:09] -rw-r--r-- 1 boincer umatlas      5956 Nov 24 00:02 init_data.xml
[2025-11-24 00:03:09] -rw------- 1 boincer umatlas      8662 Nov 24 00:02 heartbeat.json
[2025-11-24 00:03:09] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 00:03 boinc_mmap_file
[2025-11-24 00:03:09] -rw-r--r-- 1 boincer umatlas        29 Nov 24 00:03 wrapper_checkpoint.txt
[2025-11-24 00:03:09] -rw------- 1 boincer umatlas       744 Nov 24 00:03 pilotlog.txt
[2025-11-24 00:03:09] -rw------- 1 boincer umatlas   3655293 Nov 24 00:03 log.47556137._001851.job.log.1
[2025-11-24 00:03:09] -rw------- 1 boincer umatlas       353 Nov 24 00:03 output.list
[2025-11-24 00:03:09] -rw-r--r-- 1 boincer umatlas       620 Nov 24 00:03 runtime_log
[2025-11-24 00:03:09] -rw------- 1 boincer umatlas   5847040 Nov 24 00:03 result.tar.gz
[2025-11-24 00:03:09] -rw-r--r-- 1 boincer umatlas      9345 Nov 24 00:03 runtime_log.err
[2025-11-24 00:03:09] -rw------- 1 boincer umatlas       670 Nov 24 00:03 kgpKDmQIqg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmYoJKDmAkpkLo.diag
[2025-11-24 00:03:09] -rw-r--r-- 1 boincer umatlas     21306 Nov 24 00:03 stderr.txt
[2025-11-24 00:03:09] HITS file was successfully produced:
[2025-11-24 00:03:09] -rw------- 1 boincer umatlas 923497012 Nov 24 00:01 shared/HITS.pool.root.1
[2025-11-24 00:03:09]  *** Contents of shared directory: ***
[2025-11-24 00:03:09] total 1309056
[2025-11-24 00:03:09] -rw-r--r-- 2 boincer umatlas 410505383 Nov 23 16:46 ATLAS.root_0
[2025-11-24 00:03:09] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 16:46 start_atlas.sh
[2025-11-24 00:03:09] -rw-r--r-- 2 boincer umatlas    590098 Nov 23 16:46 input.tar.gz
[2025-11-24 00:03:09] -rw------- 1 boincer umatlas 923497012 Nov 24 00:01 HITS.pool.root.1
[2025-11-24 00:03:09] -rw------- 1 boincer umatlas   5847040 Nov 24 00:03 result.tar.gz
00:03:10 (463): run_atlas exited; CPU time 291164.002441
00:03:10 (463): called boinc_finish(0)

</stderr_txt>
]]>

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