Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:25:25 (17978): wrapper (7.7.26015): starting
16:25:25 (17978): wrapper: running run_atlas (--nthreads 4)
[2025-11-23 16:25:25] Arguments: --nthreads 4
[2025-11-23 16:25:25] Threads: 4
[2025-11-23 16:25:25] Checking for CVMFS
[2025-11-23 16:25:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 16:25:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 16:25:25] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 16:25:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 16:25:25] 2.11.2.0 2311 103661 77576 153221 0 81 11762069 20275200 1 130560 0 39523726 99.939 4556417 40579 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 16:25:25] CVMFS is ok
[2025-11-23 16:25:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 16:25:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 16:25:25] Further information can be found at the LHC@home message board.
[2025-11-23 16:25:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 16:25:25] Checking for apptainer binary...
[2025-11-23 16:25:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 16:25:25] Running /usr/bin/apptainer --version
[2025-11-23 16:25:25] apptainer version 1.3.2-1.el7
[2025-11-23 16:25:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 16:25:25] c-205-34.aglt2.org
[2025-11-23 16:25:25] apptainer works
[2025-11-23 16:25:25] Set ATHENA_PROC_NUMBER=4
[2025-11-23 16:25:25] Set ATHENA_CORE_NUMBER=4
[2025-11-23 16:25:25] Starting ATLAS job with PandaID=6893852259
[2025-11-23 16:25:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 01:27:53]  *** The last 200 lines of the pilot log: ***
[2025-11-24 01:27:53] 2025-11-24 06:27:18,726 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:27:53] 2025-11-24 06:27:19,674 | INFO     | time since job start (32506s) is within the limit (172800.0s)
[2025-11-24 01:27:53] 2025-11-24 06:27:21,227 | INFO     | monitor loop #2426: job 0:6893852259 is in state 'finished'
[2025-11-24 01:27:53] 2025-11-24 06:27:21,227 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:27:53] 2025-11-24 06:27:21,287 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 01:27:53] 2025-11-24 06:27:21,288 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3175.094
[2025-11-24 01:27:53] 2025-11-24 06:27:21,289 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893852259/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 01:27:53] 2025-11-24 06:27:21,289 | INFO     | extracted standard info from prmon json
[2025-11-24 01:27:53] 2025-11-24 06:27:21,289 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 01:27:53] 2025-11-24 06:27:21,289 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 01:27:53] 2025-11-24 06:27:21,293 | INFO     | fitting pss+swap vs Time
[2025-11-24 01:27:53] 2025-11-24 06:27:21,294 | INFO     | sum of square deviations: 46952478482.0
[2025-11-24 01:27:53] 2025-11-24 06:27:21,297 | INFO     | sum of deviations: 142703183632.99997
[2025-11-24 01:27:53] 2025-11-24 06:27:21,297 | INFO     | mean x: 1763949382.0
[2025-11-24 01:27:53] 2025-11-24 06:27:21,297 | INFO     | mean y: 2269983.0450281426
[2025-11-24 01:27:53] 2025-11-24 06:27:21,297 | INFO     | intersect: -5358920751.015246
[2025-11-24 01:27:53] 2025-11-24 06:27:21,297 | INFO     | chi2: 2.0788599611562666
[2025-11-24 01:27:53] 2025-11-24 06:27:21,298 | INFO     | sum of square deviations: 45643467892.0
[2025-11-24 01:27:53] 2025-11-24 06:27:21,301 | INFO     | sum of deviations: 200991692641.00006
[2025-11-24 01:27:53] 2025-11-24 06:27:21,301 | INFO     | mean x: 1763949229.5
[2025-11-24 01:27:53] 2025-11-24 06:27:21,301 | INFO     | mean y: 2276747.9318181816
[2025-11-24 01:27:53] 2025-11-24 06:27:21,301 | INFO     | intersect: -7765300032.362159
[2025-11-24 01:27:53] 2025-11-24 06:27:21,301 | INFO     | chi2: 1.2284053641268544
[2025-11-24 01:27:53] 2025-11-24 06:27:21,301 | INFO     | current chi2=1.2284053641268544 (change=40.9096626478095 %)
[2025-11-24 01:27:53] 2025-11-24 06:27:21,301 | INFO     | sum of square deviations: 44359015902.0
[2025-11-24 01:27:53] 2025-11-24 06:27:21,305 | INFO     | sum of deviations: 196919453787.0
[2025-11-24 01:27:53] 2025-11-24 06:27:21,305 | INFO     | mean x: 1763949077.0
[2025-11-24 01:27:53] 2025-11-24 06:27:21,305 | INFO     | mean y: 2276264.4856596556
[2025-11-24 01:27:53] 2025-11-24 06:27:21,305 | INFO     | intersect: -7828282680.246512
[2025-11-24 01:27:53] 2025-11-24 06:27:21,305 | INFO     | chi2: 1.2284254757564357
[2025-11-24 01:27:53] 2025-11-24 06:27:21,305 | INFO     | current chi2=1.2284254757564357 (change=-0.0016372144056502553 %)
[2025-11-24 01:27:53] 2025-11-24 06:27:21,305 | INFO     | right removable region: 522
[2025-11-24 01:27:53] 2025-11-24 06:27:21,306 | INFO     | sum of square deviations: 45643467892.0
[2025-11-24 01:27:53] 2025-11-24 06:27:21,309 | INFO     | sum of deviations: 83982604945.5
[2025-11-24 01:27:53] 2025-11-24 06:27:21,309 | INFO     | mean x: 1763949534.5
[2025-11-24 01:27:53] 2025-11-24 06:27:21,309 | INFO     | mean y: 2276787.797348485
[2025-11-24 01:27:53] 2025-11-24 06:27:21,309 | INFO     | intersect: -3243337179.358662
[2025-11-24 01:27:53] 2025-11-24 06:27:21,309 | INFO     | chi2: 0.915347897832772
[2025-11-24 01:27:53] 2025-11-24 06:27:21,309 | INFO     | current chi2=0.915347897832772 (change=55.9687561963696 %)
[2025-11-24 01:27:53] 2025-11-24 06:27:21,310 | INFO     | sum of square deviations: 44359015902.0
[2025-11-24 01:27:53] 2025-11-24 06:27:21,313 | INFO     | sum of deviations: 80022421780.00003
[2025-11-24 01:27:53] 2025-11-24 06:27:21,313 | INFO     | mean x: 1763949687.0
[2025-11-24 01:27:53] 2025-11-24 06:27:21,313 | INFO     | mean y: 2277257.260038241
[2025-11-24 01:27:53] 2025-11-24 06:27:21,313 | INFO     | intersect: -3179838553.506828
[2025-11-24 01:27:53] 2025-11-24 06:27:21,313 | INFO     | chi2: 0.9149839365548703
[2025-11-24 01:27:53] 2025-11-24 06:27:21,313 | INFO     | current chi2=0.9149839365548703 (change=0.0397620706578843 %)
[2025-11-24 01:27:53] 2025-11-24 06:27:21,313 | INFO     | left removable region: 20
[2025-11-24 01:27:53] 2025-11-24 06:27:21,314 | INFO     | sum of square deviations: 39227248985.5
[2025-11-24 01:27:53] 2025-11-24 06:27:21,316 | INFO     | sum of deviations: 131410768442.5
[2025-11-24 01:27:53] 2025-11-24 06:27:21,316 | INFO     | mean x: 1763949656.5
[2025-11-24 01:27:53] 2025-11-24 06:27:21,316 | INFO     | mean y: 2284012.5239043823
[2025-11-24 01:27:53] 2025-11-24 06:27:21,317 | INFO     | intersect: -5906924148.880237
[2025-11-24 01:27:53] 2025-11-24 06:27:21,317 | INFO     | chi2: 0.056624666697023075
[2025-11-24 01:27:53] 2025-11-24 06:27:21,317 | INFO     | current memory leak: 3.35 B/s (using 502 data points, chi2=0.06)
[2025-11-24 01:27:53] 2025-11-24 06:27:21,317 | INFO     | could have reported an average CPU frequency of 3262 MHz (21 samples)
[2025-11-24 01:27:53] 2025-11-24 06:27:21,317 | INFO     | ..............................
[2025-11-24 01:27:53] 2025-11-24 06:27:21,317 | INFO     | . Timing measurements:
[2025-11-24 01:27:53] 2025-11-24 06:27:21,317 | INFO     | . get job = 0 s
[2025-11-24 01:27:53] 2025-11-24 06:27:21,317 | INFO     | . initial setup = 2 s
[2025-11-24 01:27:53] 2025-11-24 06:27:21,317 | INFO     | . payload setup = 3 s
[2025-11-24 01:27:53] 2025-11-24 06:27:21,317 | INFO     | . stage-in = 0 s
[2025-11-24 01:27:53] 2025-11-24 06:27:21,317 | INFO     | . payload execution = 32478 s
[2025-11-24 01:27:53] 2025-11-24 06:27:21,317 | INFO     | . stage-out = 2 s
[2025-11-24 01:27:53] 2025-11-24 06:27:21,317 | INFO     | . log creation = 0 s
[2025-11-24 01:27:53] 2025-11-24 06:27:21,318 | INFO     | ..............................
[2025-11-24 01:27:53] 2025-11-24 06:27:21,354 | INFO     | 
[2025-11-24 01:27:53] 2025-11-24 06:27:21,355 | INFO     | job summary report
[2025-11-24 01:27:53] 2025-11-24 06:27:21,355 | INFO     | --------------------------------------------------
[2025-11-24 01:27:53] 2025-11-24 06:27:21,355 | INFO     | PanDA job id: 6893852259
[2025-11-24 01:27:53] 2025-11-24 06:27:21,355 | INFO     | task id: 47523449
[2025-11-24 01:27:53] 2025-11-24 06:27:21,355 | INFO     | errors: (none)
[2025-11-24 01:27:53] 2025-11-24 06:27:21,355 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 01:27:53] 2025-11-24 06:27:21,355 | INFO     | pilot state: finished 
[2025-11-24 01:27:53] 2025-11-24 06:27:21,355 | INFO     | transexitcode: 0
[2025-11-24 01:27:53] 2025-11-24 06:27:21,355 | INFO     | exeerrorcode: 0
[2025-11-24 01:27:53] 2025-11-24 06:27:21,355 | INFO     | exeerrordiag: 
[2025-11-24 01:27:53] 2025-11-24 06:27:21,355 | INFO     | exitcode: 0
[2025-11-24 01:27:53] 2025-11-24 06:27:21,355 | INFO     | exitmsg: OK
[2025-11-24 01:27:53] 2025-11-24 06:27:21,355 | INFO     | cpuconsumptiontime: 128066 s
[2025-11-24 01:27:53] 2025-11-24 06:27:21,355 | INFO     | nevents: 1000
[2025-11-24 01:27:53] 2025-11-24 06:27:21,355 | INFO     | neventsw: 0
[2025-11-24 01:27:53] 2025-11-24 06:27:21,355 | INFO     | pid: 28038
[2025-11-24 01:27:53] 2025-11-24 06:27:21,355 | INFO     | pgrp: 28038
[2025-11-24 01:27:53] 2025-11-24 06:27:21,355 | INFO     | corecount: 4
[2025-11-24 01:27:53] 2025-11-24 06:27:21,355 | INFO     | event service: False
[2025-11-24 01:27:53] 2025-11-24 06:27:21,355 | INFO     | sizes: {0: 2298807, 3: 2299069, 11: 2299097, 32486: 2339669, 32489: 2348663, 32491: 2348719, 32495: 2349093}
[2025-11-24 01:27:53] 2025-11-24 06:27:21,355 | INFO     | --------------------------------------------------
[2025-11-24 01:27:53] 2025-11-24 06:27:21,355 | INFO     | 
[2025-11-24 01:27:53] 2025-11-24 06:27:21,355 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 01:27:53] 2025-11-24 06:27:21,368 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 01:27:53] 2025-11-24 06:27:21,368 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 01:27:53] 2025-11-24 06:27:21,368 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 01:27:53] 2025-11-24 06:27:21,368 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 01:27:53] 2025-11-24 06:27:21,368 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 01:27:53] 2025-11-24 06:27:21,368 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 01:27:53] 2025-11-24 06:27:21,368 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 01:27:53] 2025-11-24 06:27:21,368 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 01:27:53] 2025-11-24 06:27:21,368 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 01:27:53] 2025-11-24 06:27:21,368 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 01:27:53] 2025-11-24 06:27:21,368 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 01:27:53] 2025-11-24 06:27:21,368 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 01:27:53] 2025-11-24 06:27:21,369 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 01:27:53] 2025-11-24 06:27:21,369 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 01:27:53] 2025-11-24 06:27:21,369 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 01:27:53] 2025-11-24 06:27:21,369 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 01:27:53] 2025-11-24 06:27:21,369 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 01:27:53] 2025-11-24 06:27:21,369 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 01:27:53] 2025-11-24 06:27:21,369 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 01:27:53] 2025-11-24 06:27:21,369 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 01:27:53] 2025-11-24 06:27:21,369 | INFO     | job 6893852259 has completed (purged errors)
[2025-11-24 01:27:53] 2025-11-24 06:27:21,369 | INFO     | overall cleanup function is called
[2025-11-24 01:27:53] 2025-11-24 06:27:22,377 | INFO     | --- collectZombieJob: --- 10, [28038]
[2025-11-24 01:27:53] 2025-11-24 06:27:22,377 | INFO     | zombie collector waiting for pid 28038
[2025-11-24 01:27:53] 2025-11-24 06:27:22,377 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 01:27:53] 2025-11-24 06:27:22,377 | INFO     | collected zombie processes
[2025-11-24 01:27:53] 2025-11-24 06:27:22,377 | INFO     | will attempt to kill all subprocesses of pid=28038
[2025-11-24 01:27:53] 2025-11-24 06:27:22,410 | INFO     | process IDs to be killed: [28038] (in reverse order)
[2025-11-24 01:27:53] 2025-11-24 06:27:22,433 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 01:27:53] 2025-11-24 06:27:22,433 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 01:27:53] 2025-11-24 06:27:22,434 | INFO     | did not find any defunct processes belonging to 28038
[2025-11-24 01:27:53] 2025-11-24 06:27:22,435 | INFO     | did not find any defunct processes belonging to 28038
[2025-11-24 01:27:53] 2025-11-24 06:27:22,436 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 01:27:53] 2025-11-24 06:27:22,436 | INFO     | ready for new job
[2025-11-24 01:27:53] 2025-11-24 06:27:22,436 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 01:27:53] 2025-11-24 06:27:22,438 | INFO     | ***************************************
[2025-11-24 01:27:53] 2025-11-24 06:27:22,438 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 01:27:53] 2025-11-24 06:27:22,438 | INFO     | ***************************************
[2025-11-24 01:27:53] 2025-11-24 06:27:22,438 | INFO     | 
[2025-11-24 01:27:53] 2025-11-24 06:27:22,438 | INFO     | architecture information:
[2025-11-24 01:27:53] 2025-11-24 06:27:22,438 | INFO     | executing command: cat /etc/os-release
[2025-11-24 01:27:53] 2025-11-24 06:27:22,446 | INFO     | cat /etc/os-release:
[2025-11-24 01:27:53] NAME="CentOS Linux"
[2025-11-24 01:27:53] VERSION="7 (Core)"
[2025-11-24 01:27:53] ID="centos"
[2025-11-24 01:27:53] ID_LIKE="rhel fedora"
[2025-11-24 01:27:53] VERSION_ID="7"
[2025-11-24 01:27:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 01:27:53] ANSI_COLOR="0;31"
[2025-11-24 01:27:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 01:27:53] HOME_URL="https://www.centos.org/"
[2025-11-24 01:27:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 01:27:53] 
[2025-11-24 01:27:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 01:27:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 01:27:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 01:27:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 01:27:53] 
[2025-11-24 01:27:53] 2025-11-24 06:27:22,446 | INFO     | ***************************************
[2025-11-24 01:27:53] 2025-11-24 06:27:22,949 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 01:27:53] 2025-11-24 06:27:22,968 | INFO     | sufficient remaining disk space (28254928896 B)
[2025-11-24 01:27:53] 2025-11-24 06:27:22,968 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 01:27:53] 2025-11-24 06:27:22,969 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 01:27:53] 2025-11-24 06:27:22,969 | INFO     | update_server=False
[2025-11-24 01:27:53] 2025-11-24 06:27:22,969 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 01:27:53] 2025-11-24 06:27:22,970 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 01:27:53] 2025-11-24 06:27:22,970 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 01:27:53] 2025-11-24 06:27:22,971 | INFO     | aborting loop
[2025-11-24 01:27:53] 2025-11-24 06:27:23,467 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 01:27:53] 2025-11-24 06:27:23,555 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 01:27:53] 2025-11-24 06:27:23,694 | INFO     | all data control threads have been joined
[2025-11-24 01:27:53] 2025-11-24 06:27:23,975 | INFO     | [job] job monitor thread has finished
[2025-11-24 01:27:53] 2025-11-24 06:27:23,975 | INFO     | [job] retrieve thread has finished
[2025-11-24 01:27:53] 2025-11-24 06:27:23,976 | INFO     | [job] queue monitor thread has finished
[2025-11-24 01:27:53] 2025-11-24 06:27:23,980 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 01:27:53] 2025-11-24 06:27:24,265 | INFO     | [payload] failed_post thread has finished
[2025-11-24 01:27:53] 2025-11-24 06:27:24,268 | INFO     | all job control threads have been joined
[2025-11-24 01:27:53] 2025-11-24 06:27:24,272 | INFO     | all payload control threads have been joined
[2025-11-24 01:27:53] 2025-11-24 06:27:24,352 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 01:27:53] 2025-11-24 06:27:24,356 | INFO     | [job] validate thread has finished
[2025-11-24 01:27:53] 2025-11-24 06:27:24,357 | INFO     | [data] copytool_in thread has finished
[2025-11-24 01:27:53] 2025-11-24 06:27:24,361 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 01:27:53] 2025-11-24 06:27:24,479 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 01:27:53] 2025-11-24 06:27:24,700 | INFO     | [data] control thread has finished
[2025-11-24 01:27:53] 2025-11-24 06:27:25,222 | INFO     | [payload] validate_post thread has finished
[2025-11-24 01:27:53] 2025-11-24 06:27:25,273 | INFO     | [job] control thread has finished
[2025-11-24 01:27:53] 2025-11-24 06:27:25,277 | INFO     | [payload] control thread has finished
[2025-11-24 01:27:53] 2025-11-24 06:27:25,560 | INFO     | [data] copytool_out thread has finished
[2025-11-24 01:27:53] 2025-11-24 06:27:27,473 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 01:27:53] 2025-11-24 06:27:27,760 | INFO     | [monitor] cgroup control has ended
[2025-11-24 01:27:53] 2025-11-24 06:27:28,770 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140588468512576)>', '<ExcThread(monitor, started 140587726513920)>']
[2025-11-24 01:27:53] 2025-11-24 06:27:33,795 | INFO     | all workflow threads have been joined
[2025-11-24 01:27:53] 2025-11-24 06:27:33,807 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 01:27:53] 2025-11-24 06:27:33,807 | INFO     | traces error code: 0
[2025-11-24 01:27:53] 2025-11-24 06:27:33,808 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 01:27:53] 2025-11-24 06:27:52,794 | INFO     | PID=21640 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 01:27:53] 2025-11-24 06:27:52,794 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 01:27:53] 2025-11-24 06:27:52,794 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 01:27:53] 2025-11-24 06:27:52,794 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 01:27:53] 2025-11-24 06:27:52,794 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 01:27:53] 2025-11-24 06:27:52,794 | INFO     | [monitor] control thread has ended
[2025-11-24 01:27:53] 2025-11-24 06:27:52,851 [wrapper] ==== pilot stdout END ====
[2025-11-24 01:27:53] 2025-11-24 06:27:52,853 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 01:27:53] 2025-11-24 06:27:52,875 [wrapper] pilotpid: 21640
[2025-11-24 01:27:53] 2025-11-24 06:27:52,881 [wrapper] Pilot exit status: 0
[2025-11-24 01:27:53] 2025-11-24 06:27:52,897 [wrapper] pandaids: 6893852259
[2025-11-24 01:27:53] 2025-11-24 06:27:52,936 [wrapper] cleanup supervisor_pilot  8358 21641
[2025-11-24 01:27:53] 2025-11-24 06:27:52,941 [wrapper] Test setup, not cleaning
[2025-11-24 01:27:53] 2025-11-24 06:27:52,946 [wrapper] apfmon messages muted
[2025-11-24 01:27:53] 2025-11-24 06:27:52,951 [wrapper] ==== wrapper stdout END ====
[2025-11-24 01:27:53] 2025-11-24 06:27:52,955 [wrapper] ==== wrapper stderr END ====
[2025-11-24 01:27:53]  *** Error codes and diagnostics ***
[2025-11-24 01:27:53]     "exeErrorCode": 0,
[2025-11-24 01:27:53]     "exeErrorDiag": "",
[2025-11-24 01:27:53]     "pilotErrorCode": 0,
[2025-11-24 01:27:53]     "pilotErrorDiag": "",
[2025-11-24 01:27:53]  *** Listing of results directory ***
[2025-11-24 01:27:53] total 1306376
[2025-11-24 01:27:53] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 06:09 pilot3.tar.gz
[2025-11-24 01:27:53] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 06:52 queuedata.json
[2025-11-24 01:27:53] -rwx------ 1 boincer umatlas     36292 Nov 20 06:54 runpilot2-wrapper.sh
[2025-11-24 01:27:53] -rw-r--r-- 1 boincer umatlas       100 Nov 23 16:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 01:27:53] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 16:25 run_atlas
[2025-11-24 01:27:53] -rw-r--r-- 1 boincer umatlas       105 Nov 23 16:25 job.xml
[2025-11-24 01:27:53] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 16:25 start_atlas.sh
[2025-11-24 01:27:53] drwxrwx--x 2 boincer umatlas      4096 Nov 23 16:25 shared
[2025-11-24 01:27:53] -rw-r--r-- 2 boincer umatlas    590105 Nov 23 16:25 input.tar.gz
[2025-11-24 01:27:53] -rw-r--r-- 2 boincer umatlas 410101737 Nov 23 16:25 EVNT.47493127._000374.pool.root.1
[2025-11-24 01:27:53] -rw-r--r-- 1 boincer umatlas         0 Nov 23 16:25 boinc_lockfile
[2025-11-24 01:27:53] -rw-r--r-- 1 boincer umatlas      2786 Nov 23 16:25 pandaJob.out
[2025-11-24 01:27:53] -rw------- 1 boincer umatlas        57 Nov 23 16:25 setup.sh.local
[2025-11-24 01:27:53] -rw------- 1 boincer umatlas    989786 Nov 23 16:25 agis_schedconf.cvmfs.json
[2025-11-24 01:27:53] drwx------ 5 boincer umatlas      4096 Nov 23 16:25 pilot3
[2025-11-24 01:27:53] -rw-r--r-- 1 boincer umatlas      6241 Nov 24 01:20 init_data.xml
[2025-11-24 01:27:53] -rw-r--r-- 1 boincer umatlas       532 Nov 24 01:22 boinc_task_state.xml
[2025-11-24 01:27:53] -rw------- 1 boincer umatlas 911971891 Nov 24 01:26 HITS.47523449._003738.pool.root.1
[2025-11-24 01:27:53] -rw------- 1 boincer umatlas        95 Nov 24 01:26 pilot_heartbeat.json
[2025-11-24 01:27:53] -rw------- 1 boincer umatlas      1051 Nov 24 01:27 memory_monitor_summary.json
[2025-11-24 01:27:53] -rw------- 1 boincer umatlas   1526164 Nov 24 01:27 agis_ddmendpoints.agis.ALL.json
[2025-11-24 01:27:53] -rw------- 1 boincer umatlas   1354441 Nov 24 01:27 log.47523449._003738.job.log.tgz.1
[2025-11-24 01:27:53] -rw-r--r-- 1 boincer umatlas        29 Nov 24 01:27 wrapper_checkpoint.txt
[2025-11-24 01:27:53] -rw------- 1 boincer umatlas      8656 Nov 24 01:27 heartbeat.json
[2025-11-24 01:27:53] -rw------- 1 boincer umatlas       745 Nov 24 01:27 pilotlog.txt
[2025-11-24 01:27:53] -rw------- 1 boincer umatlas   4511417 Nov 24 01:27 log.47523449._003738.job.log.1
[2025-11-24 01:27:53] -rw------- 1 boincer umatlas       353 Nov 24 01:27 output.list
[2025-11-24 01:27:53] -rw-r--r-- 1 boincer umatlas       620 Nov 24 01:27 runtime_log
[2025-11-24 01:27:53] -rw------- 1 boincer umatlas   5888000 Nov 24 01:27 result.tar.gz
[2025-11-24 01:27:53] -rw------- 1 boincer umatlas       665 Nov 24 01:27 tqqMDmoPIg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm1ZGKDm1z29Io.diag
[2025-11-24 01:27:53] -rw-r--r-- 1 boincer umatlas      9343 Nov 24 01:27 runtime_log.err
[2025-11-24 01:27:53] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 01:27 boinc_mmap_file
[2025-11-24 01:27:53] -rw-r--r-- 1 boincer umatlas     21254 Nov 24 01:27 stderr.txt
[2025-11-24 01:27:53] HITS file was successfully produced:
[2025-11-24 01:27:53] -rw------- 1 boincer umatlas 911971891 Nov 24 01:26 shared/HITS.pool.root.1
[2025-11-24 01:27:53]  *** Contents of shared directory: ***
[2025-11-24 01:27:53] total 1297444
[2025-11-24 01:27:53] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 16:25 start_atlas.sh
[2025-11-24 01:27:53] -rw-r--r-- 2 boincer umatlas    590105 Nov 23 16:25 input.tar.gz
[2025-11-24 01:27:53] -rw-r--r-- 2 boincer umatlas 410101737 Nov 23 16:25 ATLAS.root_0
[2025-11-24 01:27:53] -rw------- 1 boincer umatlas 911971891 Nov 24 01:26 HITS.pool.root.1
[2025-11-24 01:27:53] -rw------- 1 boincer umatlas   5888000 Nov 24 01:27 result.tar.gz
01:27:54 (17978): run_atlas exited; CPU time 128005.091592
01:27:54 (17978): called boinc_finish(0)

</stderr_txt>
]]>

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