Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:13:09 (26934): wrapper (7.7.26015): starting
16:13:09 (26934): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 16:13:09] Arguments: --nthreads 8
[2025-11-23 16:13:09] Threads: 8
[2025-11-23 16:13:09] Checking for CVMFS
[2025-11-23 16:13:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 16:13:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 16:13:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 16:13:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 16:13:09] 2.11.2.0 2878 53702 83788 153220 2 81 13516578 20275200 1 130560 0 10807413 99.772 3270391 30880 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 16:13:09] CVMFS is ok
[2025-11-23 16:13:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 16:13:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 16:13:09] Further information can be found at the LHC@home message board.
[2025-11-23 16:13:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 16:13:09] Checking for apptainer binary...
[2025-11-23 16:13:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 16:13:09] Running /usr/bin/apptainer --version
[2025-11-23 16:13:09] apptainer version 1.3.2-1.el7
[2025-11-23 16:13:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 16:13:11] c-204-27.aglt2.org
[2025-11-23 16:13:11] apptainer works
[2025-11-23 16:13:11] Set ATHENA_PROC_NUMBER=8
[2025-11-23 16:13:11] Set ATHENA_CORE_NUMBER=8
[2025-11-23 16:13:11] Starting ATLAS job with PandaID=6895351755
[2025-11-23 16:13:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
04:27:16 (14867): wrapper (7.7.26015): starting
04:27:16 (14867): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 04:27:16] Arguments: --nthreads 8
[2025-11-24 04:27:16] Threads: 8
[2025-11-24 04:27:16] This job has been restarted, cleaning up previous attempt
[2025-11-24 04:27:16] Checking for CVMFS
[2025-11-24 04:27:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 04:27:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 04:27:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 04:27:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 04:27:17] 2.11.2.0 2878 54436 81060 153240 1 49 14415563 20275200 1 130560 0 11039038 99.777 3299232 30920 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 04:27:17] CVMFS is ok
[2025-11-24 04:27:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 04:27:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 04:27:17] Further information can be found at the LHC@home message board.
[2025-11-24 04:27:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 04:27:17] Checking for apptainer binary...
[2025-11-24 04:27:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 04:27:17] Running /usr/bin/apptainer --version
[2025-11-24 04:27:17] apptainer version 1.3.2-1.el7
[2025-11-24 04:27:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 04:27:19] c-204-27.aglt2.org
[2025-11-24 04:27:19] apptainer works
[2025-11-24 04:27:19] Set ATHENA_PROC_NUMBER=8
[2025-11-24 04:27:19] Set ATHENA_CORE_NUMBER=8
[2025-11-24 04:27:19] Starting ATLAS job with PandaID=6895351755
[2025-11-24 04:27:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 16:53:20]  *** The last 200 lines of the pilot log: ***
[2025-11-24 16:53:20] 2025-11-24 21:52:47,047 | INFO     | fitting pss+swap vs Time
[2025-11-24 16:53:20] 2025-11-24 21:52:47,048 | INFO     | sum of square deviations: 122120470283.11052
[2025-11-24 16:53:20] 2025-11-24 21:52:47,053 | INFO     | monitor loop #3282: job 0:6895351755 is in state 'finished'
[2025-11-24 16:53:20] 2025-11-24 21:52:47,059 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 16:53:20] 2025-11-24 21:52:47,060 | INFO     | sum of deviations: 655073499095.2717
[2025-11-24 16:53:20] 2025-11-24 21:52:47,060 | INFO     | mean x: 1763998816.6657572
[2025-11-24 16:53:20] 2025-11-24 21:52:47,060 | INFO     | mean y: 3162067.4051841744
[2025-11-24 16:53:20] 2025-11-24 21:52:47,060 | INFO     | intersect: -9459206318.126417
[2025-11-24 16:53:20] 2025-11-24 21:52:47,061 | INFO     | chi2: 7.080421671934765
[2025-11-24 16:53:20] 2025-11-24 21:52:47,062 | INFO     | sum of square deviations: 119638563280.87917
[2025-11-24 16:53:20] 2025-11-24 21:52:47,074 | INFO     | sum of deviations: 954676631047.0221
[2025-11-24 16:53:20] 2025-11-24 21:52:47,074 | INFO     | mean x: 1763998664.1703296
[2025-11-24 16:53:20] 2025-11-24 21:52:47,074 | INFO     | mean y: 3180478.241758242
[2025-11-24 16:53:20] 2025-11-24 21:52:47,074 | INFO     | intersect: -14072952297.842196
[2025-11-24 16:53:20] 2025-11-24 21:52:47,075 | INFO     | chi2: 3.2865729642264525
[2025-11-24 16:53:20] 2025-11-24 21:52:47,075 | INFO     | current chi2=3.2865729642264525 (change=53.582242463698094 %)
[2025-11-24 16:53:20] 2025-11-24 21:52:47,076 | INFO     | sum of square deviations: 117190517378.6169
[2025-11-24 16:53:20] 2025-11-24 21:52:47,087 | INFO     | sum of deviations: 1084470500966.5526
[2025-11-24 16:53:20] 2025-11-24 21:52:47,087 | INFO     | mean x: 1763998511.6749654
[2025-11-24 16:53:20] 2025-11-24 21:52:47,087 | INFO     | mean y: 3188556.074688797
[2025-11-24 16:53:20] 2025-11-24 21:52:47,087 | INFO     | intersect: -16320694915.4856
[2025-11-24 16:53:20] 2025-11-24 21:52:47,088 | INFO     | chi2: 2.4281964522820036
[2025-11-24 16:53:20] 2025-11-24 21:52:47,088 | INFO     | current chi2=2.4281964522820036 (change=26.117677023686024 %)
[2025-11-24 16:53:20] 2025-11-24 21:52:47,089 | INFO     | sum of square deviations: 114776012052.53612
[2025-11-24 16:53:20] 2025-11-24 21:52:47,100 | INFO     | sum of deviations: 1088719975996.1653
[2025-11-24 16:53:20] 2025-11-24 21:52:47,100 | INFO     | mean x: 1763998359.1768801
[2025-11-24 16:53:20] 2025-11-24 21:52:47,100 | INFO     | mean y: 3188818.6364902505
[2025-11-24 16:53:20] 2025-11-24 21:52:47,100 | INFO     | intersect: -16729403792.973524
[2025-11-24 16:53:20] 2025-11-24 21:52:47,101 | INFO     | chi2: 2.377736046402969
[2025-11-24 16:53:20] 2025-11-24 21:52:47,101 | INFO     | current chi2=2.377736046402969 (change=2.078102281700156 %)
[2025-11-24 16:53:20] 2025-11-24 21:52:47,101 | INFO     | right removable region: 717
[2025-11-24 16:53:20] 2025-11-24 21:52:47,102 | INFO     | sum of square deviations: 119638265600.8791
[2025-11-24 16:53:20] 2025-11-24 21:52:47,113 | INFO     | sum of deviations: 434386360755.5871
[2025-11-24 16:53:20] 2025-11-24 21:52:47,113 | INFO     | mean x: 1763998969.1703296
[2025-11-24 16:53:20] 2025-11-24 21:52:47,113 | INFO     | mean y: 3175604.342032967
[2025-11-24 16:53:20] 2025-11-24 21:52:47,113 | INFO     | intersect: -6401607085.761392
[2025-11-24 16:53:20] 2025-11-24 21:52:47,114 | INFO     | chi2: 4.85152354470308
[2025-11-24 16:53:20] 2025-11-24 21:52:47,114 | INFO     | current chi2=4.85152354470308 (change=31.479737090610676 %)
[2025-11-24 16:53:20] 2025-11-24 21:52:47,115 | INFO     | sum of square deviations: 117190055365.65393
[2025-11-24 16:53:20] 2025-11-24 21:52:47,126 | INFO     | sum of deviations: 390149136221.1909
[2025-11-24 16:53:20] 2025-11-24 21:52:47,127 | INFO     | mean x: 1763999121.670816
[2025-11-24 16:53:20] 2025-11-24 21:52:47,127 | INFO     | mean y: 3178358.269709544
[2025-11-24 16:53:20] 2025-11-24 21:52:47,127 | INFO     | intersect: -5869527576.269107
[2025-11-24 16:53:20] 2025-11-24 21:52:47,128 | INFO     | chi2: 4.808064329180658
[2025-11-24 16:53:20] 2025-11-24 21:52:47,128 | INFO     | current chi2=4.808064329180658 (change=0.8957849038962512 %)
[2025-11-24 16:53:20] 2025-11-24 21:52:47,128 | INFO     | left removable region: 20
[2025-11-24 16:53:20] 2025-11-24 21:52:47,129 | INFO     | sum of square deviations: 104996465113.81728
[2025-11-24 16:53:20] 2025-11-24 21:52:47,139 | INFO     | sum of deviations: 770141256205.0063
[2025-11-24 16:53:20] 2025-11-24 21:52:47,139 | INFO     | mean x: 1763998938.687231
[2025-11-24 16:53:20] 2025-11-24 21:52:47,139 | INFO     | mean y: 3209017.6972740316
[2025-11-24 16:53:20] 2025-11-24 21:52:47,139 | INFO     | intersect: -12935591894.430798
[2025-11-24 16:53:20] 2025-11-24 21:52:47,140 | INFO     | chi2: 0.06231749621051007
[2025-11-24 16:53:20] 2025-11-24 21:52:47,140 | INFO     | current memory leak: 7.33 B/s (using 697 data points, chi2=0.06)
[2025-11-24 16:53:20] 2025-11-24 21:52:47,141 | INFO     | could have reported an average CPU frequency of 2166 MHz (28 samples)
[2025-11-24 16:53:20] 2025-11-24 21:52:47,141 | INFO     | ..............................
[2025-11-24 16:53:20] 2025-11-24 21:52:47,141 | INFO     | . Timing measurements:
[2025-11-24 16:53:20] 2025-11-24 21:52:47,141 | INFO     | . get job = 0 s
[2025-11-24 16:53:20] 2025-11-24 21:52:47,141 | INFO     | . initial setup = 2 s
[2025-11-24 16:53:20] 2025-11-24 21:52:47,141 | INFO     | . payload setup = 9 s
[2025-11-24 16:53:20] 2025-11-24 21:52:47,141 | INFO     | . stage-in = 0 s
[2025-11-24 16:53:20] 2025-11-24 21:52:47,142 | INFO     | . payload execution = 44663 s
[2025-11-24 16:53:20] 2025-11-24 21:52:47,142 | INFO     | . stage-out = 3 s
[2025-11-24 16:53:20] 2025-11-24 21:52:47,142 | INFO     | . log creation = 0 s
[2025-11-24 16:53:20] 2025-11-24 21:52:47,142 | INFO     | ..............................
[2025-11-24 16:53:20] 2025-11-24 21:52:47,231 | INFO     | 
[2025-11-24 16:53:20] 2025-11-24 21:52:47,232 | INFO     | job summary report
[2025-11-24 16:53:20] 2025-11-24 21:52:47,232 | INFO     | --------------------------------------------------
[2025-11-24 16:53:20] 2025-11-24 21:52:47,232 | INFO     | PanDA job id: 6895351755
[2025-11-24 16:53:20] 2025-11-24 21:52:47,232 | INFO     | task id: 47556137
[2025-11-24 16:53:20] 2025-11-24 21:52:47,232 | INFO     | errors: (none)
[2025-11-24 16:53:20] 2025-11-24 21:52:47,232 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 16:53:20] 2025-11-24 21:52:47,233 | INFO     | pilot state: finished 
[2025-11-24 16:53:20] 2025-11-24 21:52:47,233 | INFO     | transexitcode: 0
[2025-11-24 16:53:20] 2025-11-24 21:52:47,233 | INFO     | exeerrorcode: 0
[2025-11-24 16:53:20] 2025-11-24 21:52:47,233 | INFO     | exeerrordiag: 
[2025-11-24 16:53:20] 2025-11-24 21:52:47,233 | INFO     | exitcode: 0
[2025-11-24 16:53:20] 2025-11-24 21:52:47,233 | INFO     | exitmsg: OK
[2025-11-24 16:53:20] 2025-11-24 21:52:47,234 | INFO     | cpuconsumptiontime: 346207 s
[2025-11-24 16:53:20] 2025-11-24 21:52:47,234 | INFO     | nevents: 1000
[2025-11-24 16:53:20] 2025-11-24 21:52:47,234 | INFO     | neventsw: 0
[2025-11-24 16:53:20] 2025-11-24 21:52:47,234 | INFO     | pid: 25080
[2025-11-24 16:53:20] 2025-11-24 21:52:47,234 | INFO     | pgrp: 25080
[2025-11-24 16:53:20] 2025-11-24 21:52:47,234 | INFO     | corecount: 8
[2025-11-24 16:53:20] 2025-11-24 21:52:47,234 | INFO     | event service: False
[2025-11-24 16:53:20] 2025-11-24 21:52:47,235 | INFO     | sizes: {0: 2298529, 1: 2298784, 7: 2299046, 12: 2299074, 44676: 2344916, 44680: 2354701, 44684: 2354885, 44692: 2355131}
[2025-11-24 16:53:20] 2025-11-24 21:52:47,235 | INFO     | --------------------------------------------------
[2025-11-24 16:53:20] 2025-11-24 21:52:47,235 | INFO     | 
[2025-11-24 16:53:20] 2025-11-24 21:52:47,235 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 16:53:20] 2025-11-24 21:52:47,262 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 16:53:20] 2025-11-24 21:52:47,263 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 16:53:20] 2025-11-24 21:52:47,263 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 16:53:20] 2025-11-24 21:52:47,263 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 16:53:20] 2025-11-24 21:52:47,263 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 16:53:20] 2025-11-24 21:52:47,264 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 16:53:20] 2025-11-24 21:52:47,264 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 16:53:20] 2025-11-24 21:52:47,264 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 16:53:20] 2025-11-24 21:52:47,264 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 16:53:20] 2025-11-24 21:52:47,264 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 16:53:20] 2025-11-24 21:52:47,264 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 16:53:20] 2025-11-24 21:52:47,265 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 16:53:20] 2025-11-24 21:52:47,265 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 16:53:20] 2025-11-24 21:52:47,265 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 16:53:20] 2025-11-24 21:52:47,265 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 16:53:20] 2025-11-24 21:52:47,265 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 16:53:20] 2025-11-24 21:52:47,266 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 16:53:20] 2025-11-24 21:52:47,266 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 16:53:20] 2025-11-24 21:52:47,266 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 16:53:20] 2025-11-24 21:52:47,266 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 16:53:20] 2025-11-24 21:52:47,266 | INFO     | job 6895351755 has completed (purged errors)
[2025-11-24 16:53:20] 2025-11-24 21:52:47,267 | INFO     | overall cleanup function is called
[2025-11-24 16:53:20] 2025-11-24 21:52:48,283 | INFO     | --- collectZombieJob: --- 10, [25080]
[2025-11-24 16:53:20] 2025-11-24 21:52:48,283 | INFO     | zombie collector waiting for pid 25080
[2025-11-24 16:53:20] 2025-11-24 21:52:48,283 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 16:53:20] 2025-11-24 21:52:48,283 | INFO     | collected zombie processes
[2025-11-24 16:53:20] 2025-11-24 21:52:48,283 | INFO     | will attempt to kill all subprocesses of pid=25080
[2025-11-24 16:53:20] 2025-11-24 21:52:48,373 | INFO     | process IDs to be killed: [25080] (in reverse order)
[2025-11-24 16:53:20] 2025-11-24 21:52:48,431 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 16:53:20] 2025-11-24 21:52:48,432 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 16:53:20] 2025-11-24 21:52:48,436 | INFO     | did not find any defunct processes belonging to 25080
[2025-11-24 16:53:20] 2025-11-24 21:52:48,438 | INFO     | did not find any defunct processes belonging to 25080
[2025-11-24 16:53:20] 2025-11-24 21:52:48,441 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 16:53:20] 2025-11-24 21:52:48,441 | INFO     | ready for new job
[2025-11-24 16:53:20] 2025-11-24 21:52:48,441 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 16:53:20] 2025-11-24 21:52:48,444 | INFO     | ***************************************
[2025-11-24 16:53:20] 2025-11-24 21:52:48,445 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 16:53:20] 2025-11-24 21:52:48,445 | INFO     | ***************************************
[2025-11-24 16:53:20] 2025-11-24 21:52:48,445 | INFO     | 
[2025-11-24 16:53:20] 2025-11-24 21:52:48,445 | INFO     | architecture information:
[2025-11-24 16:53:20] 2025-11-24 21:52:48,446 | INFO     | executing command: cat /etc/os-release
[2025-11-24 16:53:20] 2025-11-24 21:52:48,466 | INFO     | cat /etc/os-release:
[2025-11-24 16:53:20] NAME="CentOS Linux"
[2025-11-24 16:53:20] VERSION="7 (Core)"
[2025-11-24 16:53:20] ID="centos"
[2025-11-24 16:53:20] ID_LIKE="rhel fedora"
[2025-11-24 16:53:20] VERSION_ID="7"
[2025-11-24 16:53:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 16:53:20] ANSI_COLOR="0;31"
[2025-11-24 16:53:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 16:53:20] HOME_URL="https://www.centos.org/"
[2025-11-24 16:53:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 16:53:20] 
[2025-11-24 16:53:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 16:53:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 16:53:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 16:53:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 16:53:20] 
[2025-11-24 16:53:20] 2025-11-24 21:52:48,467 | INFO     | ***************************************
[2025-11-24 16:53:20] 2025-11-24 21:52:48,970 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 16:53:20] 2025-11-24 21:52:48,992 | INFO     | sufficient remaining disk space (17014194176 B)
[2025-11-24 16:53:20] 2025-11-24 21:52:48,993 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 16:53:20] 2025-11-24 21:52:48,993 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 16:53:20] 2025-11-24 21:52:48,993 | INFO     | update_server=False
[2025-11-24 16:53:20] 2025-11-24 21:52:48,994 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 16:53:20] 2025-11-24 21:52:48,994 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 16:53:20] 2025-11-24 21:52:48,994 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 16:53:20] 2025-11-24 21:52:48,995 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 16:53:20] 2025-11-24 21:52:48,995 | INFO     | aborting loop
[2025-11-24 16:53:20] 2025-11-24 21:52:49,237 | INFO     | all payload control threads have been joined
[2025-11-24 16:53:20] 2025-11-24 21:52:49,383 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 16:53:20] 2025-11-24 21:52:49,520 | INFO     | all data control threads have been joined
[2025-11-24 16:53:20] 2025-11-24 21:52:49,543 | INFO     | all job control threads have been joined
[2025-11-24 16:53:20] 2025-11-24 21:52:49,999 | INFO     | [job] retrieve thread has finished
[2025-11-24 16:53:20] 2025-11-24 21:52:50,000 | INFO     | [job] queue monitor thread has finished
[2025-11-24 16:53:20] 2025-11-24 21:52:50,001 | INFO     | [job] job monitor thread has finished
[2025-11-24 16:53:20] 2025-11-24 21:52:50,031 | INFO     | [data] copytool_in thread has finished
[2025-11-24 16:53:20] 2025-11-24 21:52:50,242 | INFO     | [payload] control thread has finished
[2025-11-24 16:53:20] 2025-11-24 21:52:50,525 | INFO     | [data] control thread has finished
[2025-11-24 16:53:20] 2025-11-24 21:52:50,549 | INFO     | [job] control thread has finished
[2025-11-24 16:53:20] 2025-11-24 21:52:50,756 | INFO     | [job] validate thread has finished
[2025-11-24 16:53:20] 2025-11-24 21:52:50,815 | INFO     | [monitor] cgroup control has ended
[2025-11-24 16:53:20] 2025-11-24 21:52:51,000 | INFO     | [data] copytool_out thread has finished
[2025-11-24 16:53:20] 2025-11-24 21:52:51,194 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 16:53:20] 2025-11-24 21:52:51,275 | INFO     | [payload] failed_post thread has finished
[2025-11-24 16:53:20] 2025-11-24 21:52:51,287 | INFO     | [payload] validate_post thread has finished
[2025-11-24 16:53:20] 2025-11-24 21:52:51,454 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 16:53:20] 2025-11-24 21:52:51,459 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 16:53:20] 2025-11-24 21:52:53,389 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 16:53:20] 2025-11-24 21:52:59,190 | INFO     | job.realtimelogging is not enabled
[2025-11-24 16:53:20] 2025-11-24 21:53:00,195 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 16:53:20] 2025-11-24 21:53:02,214 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139721807009600)>', '<ExcThread(monitor, started 139720755492608)>']
[2025-11-24 16:53:20] 2025-11-24 21:53:07,215 | INFO     | all workflow threads have been joined
[2025-11-24 16:53:20] 2025-11-24 21:53:07,216 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 16:53:20] 2025-11-24 21:53:07,216 | INFO     | traces error code: 0
[2025-11-24 16:53:20] 2025-11-24 21:53:07,216 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 16:53:20] 2025-11-24 21:53:20,159 | INFO     | PID=18569 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 16:53:20] 2025-11-24 21:53:20,159 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 16:53:20] 2025-11-24 21:53:20,159 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 16:53:20] 2025-11-24 21:53:20,159 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 16:53:20] 2025-11-24 21:53:20,159 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 16:53:20] 2025-11-24 21:53:20,159 | INFO     | [monitor] control thread has ended
[2025-11-24 16:53:20] 2025-11-24 21:53:20,262 [wrapper] ==== pilot stdout END ====
[2025-11-24 16:53:20] 2025-11-24 21:53:20,268 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 16:53:20] 2025-11-24 21:53:20,272 [wrapper] pilotpid: 18569
[2025-11-24 16:53:20] 2025-11-24 21:53:20,277 [wrapper] Pilot exit status: 0
[2025-11-24 16:53:20] 2025-11-24 21:53:20,299 [wrapper] pandaids: 6895351755 6895351755
[2025-11-24 16:53:20] 2025-11-24 21:53:20,348 [wrapper] cleanup supervisor_pilot  8579 18570
[2025-11-24 16:53:20] 2025-11-24 21:53:20,353 [wrapper] Test setup, not cleaning
[2025-11-24 16:53:20] 2025-11-24 21:53:20,358 [wrapper] apfmon messages muted
[2025-11-24 16:53:20] 2025-11-24 21:53:20,363 [wrapper] ==== wrapper stdout END ====
[2025-11-24 16:53:20] 2025-11-24 21:53:20,368 [wrapper] ==== wrapper stderr END ====
[2025-11-24 16:53:20]  *** Error codes and diagnostics ***
[2025-11-24 16:53:20]     "exeErrorCode": 0,
[2025-11-24 16:53:20]     "exeErrorDiag": "",
[2025-11-24 16:53:20]     "pilotErrorCode": 0,
[2025-11-24 16:53:20]     "pilotErrorDiag": "",
[2025-11-24 16:53:20]  *** Listing of results directory ***
[2025-11-24 16:53:20] total 1729624
[2025-11-24 16:53:20] drwx------ 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-24 16:53:20] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 20:11 queuedata.json
[2025-11-24 16:53:20] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 20:11 pilot3.tar.gz
[2025-11-24 16:53:20] -rwx------ 1 boincer umatlas     36292 Nov 22 20:11 runpilot2-wrapper.sh
[2025-11-24 16:53:20] -rw-r--r-- 1 boincer umatlas       100 Nov 23 16:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 16:53:20] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 16:13 run_atlas
[2025-11-24 16:53:20] -rw-r--r-- 1 boincer umatlas       105 Nov 23 16:13 job.xml
[2025-11-24 16:53:20] -rw-r--r-- 3 boincer umatlas 409781839 Nov 23 16:13 EVNT.47483658._000563.pool.root.1
[2025-11-24 16:53:20] -rw-r--r-- 3 boincer umatlas 409781839 Nov 23 16:13 ATLAS.root_0
[2025-11-24 16:53:20] drwxrwx--x 2 boincer umatlas      4096 Nov 23 16:13 shared
[2025-11-24 16:53:20] -rw-r--r-- 2 boincer umatlas    590102 Nov 23 16:13 input.tar.gz
[2025-11-24 16:53:20] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 16:13 start_atlas.sh
[2025-11-24 16:53:20] -rw-r--r-- 1 boincer umatlas         0 Nov 23 16:13 boinc_lockfile
[2025-11-24 16:53:20] -rw-r--r-- 1 boincer umatlas      2785 Nov 24 04:27 pandaJob.out
[2025-11-24 16:53:20] -rw------- 1 boincer umatlas        57 Nov 24 04:27 setup.sh.local
[2025-11-24 16:53:20] -rw------- 1 boincer umatlas    989824 Nov 24 04:27 agis_schedconf.cvmfs.json
[2025-11-24 16:53:20] -rw-r--r-- 1 boincer umatlas       533 Nov 24 16:40 boinc_task_state.xml
[2025-11-24 16:53:20] -rw-r--r-- 1 boincer umatlas      5912 Nov 24 16:45 init_data.xml
[2025-11-24 16:53:20] -rw------- 1 boincer umatlas 931409083 Nov 24 16:51 HITS.47556137._005585.pool.root.1
[2025-11-24 16:53:20] -rw------- 1 boincer umatlas      1074 Nov 24 16:52 memory_monitor_summary.json
[2025-11-24 16:53:20] -rw------- 1 boincer umatlas   1516227 Nov 24 16:52 agis_ddmendpoints.agis.ALL.json
[2025-11-24 16:53:20] -rw------- 1 boincer umatlas   1974599 Nov 24 16:52 log.47556137._005585.job.log.tgz.1
[2025-11-24 16:53:20] -rw------- 1 boincer umatlas      8660 Nov 24 16:52 heartbeat.json
[2025-11-24 16:53:20] -rw------- 1 boincer umatlas        96 Nov 24 16:52 pilot_heartbeat.json
[2025-11-24 16:53:20] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 16:53 boinc_mmap_file
[2025-11-24 16:53:20] -rw-r--r-- 1 boincer umatlas        29 Nov 24 16:53 wrapper_checkpoint.txt
[2025-11-24 16:53:20] -rw------- 1 boincer umatlas       745 Nov 24 16:53 pilotlog.txt
[2025-11-24 16:53:20] -rw------- 1 boincer umatlas   6150563 Nov 24 16:53 log.47556137._005585.job.log.1
[2025-11-24 16:53:20] -rw------- 1 boincer umatlas       353 Nov 24 16:53 output.list
[2025-11-24 16:53:20] -rw-r--r-- 1 boincer umatlas       620 Nov 24 16:53 runtime_log
[2025-11-24 16:53:20] -rw------- 1 boincer umatlas   8140800 Nov 24 16:53 result.tar.gz
[2025-11-24 16:53:20] -rw-r--r-- 1 boincer umatlas      9428 Nov 24 16:53 runtime_log.err
[2025-11-24 16:53:20] -rw------- 1 boincer umatlas       793 Nov 24 16:53 a41KDmZoDh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmgVKKDmavhO2n.diag
[2025-11-24 16:53:20] -rw-r--r-- 1 boincer umatlas     23292 Nov 24 16:53 stderr.txt
[2025-11-24 16:53:20] HITS file was successfully produced:
[2025-11-24 16:53:20] -rw------- 1 boincer umatlas 931409083 Nov 24 16:51 shared/HITS.pool.root.1
[2025-11-24 16:53:20]  *** Contents of shared directory: ***
[2025-11-24 16:53:20] total 1318312
[2025-11-24 16:53:20] -rw-r--r-- 3 boincer umatlas 409781839 Nov 23 16:13 ATLAS.root_0
[2025-11-24 16:53:20] -rw-r--r-- 2 boincer umatlas    590102 Nov 23 16:13 input.tar.gz
[2025-11-24 16:53:20] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 16:13 start_atlas.sh
[2025-11-24 16:53:20] -rw------- 1 boincer umatlas 931409083 Nov 24 16:51 HITS.pool.root.1
[2025-11-24 16:53:20] -rw------- 1 boincer umatlas   8140800 Nov 24 16:53 result.tar.gz
16:53:21 (14867): run_atlas exited; CPU time 343891.856879
16:53:21 (14867): called boinc_finish(0)

</stderr_txt>
]]>

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