Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:03:51 (1604): wrapper (7.7.26015): starting
16:03:51 (1604): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 16:03:51] Arguments: --nthreads 8
[2025-11-23 16:03:51] Threads: 8
[2025-11-23 16:03:51] Checking for CVMFS
[2025-11-23 16:03:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 16:03:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 16:03:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 16:03:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 16:03:51] 2.11.2.0 2831 39249 81168 153220 2 81 12562640 20275200 1 130560 0 4591863 99.566 2638490 24718 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 16:03:51] CVMFS is ok
[2025-11-23 16:03:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 16:03:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 16:03:51] Further information can be found at the LHC@home message board.
[2025-11-23 16:03:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 16:03:51] Checking for apptainer binary...
[2025-11-23 16:03:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 16:03:51] Running /usr/bin/apptainer --version
[2025-11-23 16:03:51] apptainer version 1.3.2-1.el7
[2025-11-23 16:03:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 16:03:53] c-204-31.aglt2.org
[2025-11-23 16:03:53] apptainer works
[2025-11-23 16:03:53] Set ATHENA_PROC_NUMBER=8
[2025-11-23 16:03:53] Set ATHENA_CORE_NUMBER=8
[2025-11-23 16:03:53] Starting ATLAS job with PandaID=6895351764
[2025-11-23 16:03:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 04:18:33]  *** The last 200 lines of the pilot log: ***
[2025-11-24 04:18:33] 2025-11-24 09:17:58,293 | INFO     | monitor loop #3226: job 0:6895351764 is in state 'finished'
[2025-11-24 04:18:33] 2025-11-24 09:17:58,294 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 04:18:33] 2025-11-24 09:17:59,267 | INFO     | PID=5501 has CPU usage=14.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 04:18:33] 2025-11-24 09:18:00,268 | INFO     | time since job start (44030s) is within the limit (172800.0s)
[2025-11-24 04:18:33] 2025-11-24 09:18:00,342 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 04:18:33] 2025-11-24 09:18:00,346 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.5
[2025-11-24 04:18:33] 2025-11-24 09:18:00,348 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895351764/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 04:18:33] 2025-11-24 09:18:00,349 | INFO     | extracted standard info from prmon json
[2025-11-24 04:18:33] 2025-11-24 09:18:00,349 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 04:18:33] 2025-11-24 09:18:00,350 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 04:18:33] 2025-11-24 09:18:00,363 | INFO     | fitting pss+swap vs Time
[2025-11-24 04:18:33] 2025-11-24 09:18:00,363 | INFO     | sum of square deviations: 116703802667.66205
[2025-11-24 04:18:33] 2025-11-24 09:18:00,374 | INFO     | sum of deviations: 819731788601.8813
[2025-11-24 04:18:33] 2025-11-24 09:18:00,374 | INFO     | mean x: 1763953874.204986
[2025-11-24 04:18:33] 2025-11-24 09:18:00,374 | INFO     | mean y: 3153921.088642659
[2025-11-24 04:18:33] 2025-11-24 09:18:00,375 | INFO     | intersect: -12386922762.45323
[2025-11-24 04:18:33] 2025-11-24 09:18:00,375 | INFO     | chi2: 7.238059489406599
[2025-11-24 04:18:33] 2025-11-24 09:18:00,376 | INFO     | sum of square deviations: 114296089507.65955
[2025-11-24 04:18:33] 2025-11-24 09:18:00,387 | INFO     | sum of deviations: 1120750541050.7212
[2025-11-24 04:18:33] 2025-11-24 09:18:00,388 | INFO     | mean x: 1763953721.7099023
[2025-11-24 04:18:33] 2025-11-24 09:18:00,388 | INFO     | mean y: 3172986.320781032
[2025-11-24 04:18:33] 2025-11-24 09:18:00,388 | INFO     | intersect: -17293587528.502613
[2025-11-24 04:18:33] 2025-11-24 09:18:00,389 | INFO     | chi2: 3.273253259421884
[2025-11-24 04:18:33] 2025-11-24 09:18:00,389 | INFO     | current chi2=3.273253259421884 (change=54.77719872000891 %)
[2025-11-24 04:18:33] 2025-11-24 09:18:00,390 | INFO     | sum of square deviations: 111921725810.1212
[2025-11-24 04:18:33] 2025-11-24 09:18:00,400 | INFO     | sum of deviations: 1218910986363.528
[2025-11-24 04:18:33] 2025-11-24 09:18:00,401 | INFO     | mean x: 1763953569.2148876
[2025-11-24 04:18:33] 2025-11-24 09:18:00,401 | INFO     | mean y: 3179277.1011235956
[2025-11-24 04:18:33] 2025-11-24 09:18:00,401 | INFO     | intersect: -19207589404.208366
[2025-11-24 04:18:33] 2025-11-24 09:18:00,402 | INFO     | chi2: 2.6149710483916038
[2025-11-24 04:18:33] 2025-11-24 09:18:00,402 | INFO     | current chi2=2.6149710483916038 (change=20.110946476122805 %)
[2025-11-24 04:18:33] 2025-11-24 09:18:00,402 | INFO     | right removable region: 711
[2025-11-24 04:18:33] 2025-11-24 09:18:00,403 | INFO     | sum of square deviations: 114295779017.65964
[2025-11-24 04:18:33] 2025-11-24 09:18:00,413 | INFO     | sum of deviations: 597393934372.7422
[2025-11-24 04:18:33] 2025-11-24 09:18:00,414 | INFO     | mean x: 1763954026.7099023
[2025-11-24 04:18:33] 2025-11-24 09:18:00,414 | INFO     | mean y: 3167977.59972106
[2025-11-24 04:18:33] 2025-11-24 09:18:00,414 | INFO     | intersect: -9216555140.137222
[2025-11-24 04:18:33] 2025-11-24 09:18:00,415 | INFO     | chi2: 4.853840479763503
[2025-11-24 04:18:33] 2025-11-24 09:18:00,415 | INFO     | current chi2=4.853840479763503 (change=32.94003058599568 %)
[2025-11-24 04:18:33] 2025-11-24 09:18:00,416 | INFO     | sum of square deviations: 111921192182.97635
[2025-11-24 04:18:33] 2025-11-24 09:18:00,427 | INFO     | sum of deviations: 553289250244.6248
[2025-11-24 04:18:33] 2025-11-24 09:18:00,427 | INFO     | mean x: 1763954179.2120786
[2025-11-24 04:18:33] 2025-11-24 09:18:00,427 | INFO     | mean y: 3170808.625
[2025-11-24 04:18:33] 2025-11-24 09:18:00,427 | INFO     | intersect: -8717044427.168148
[2025-11-24 04:18:33] 2025-11-24 09:18:00,428 | INFO     | chi2: 4.817964286560006
[2025-11-24 04:18:33] 2025-11-24 09:18:00,428 | INFO     | current chi2=4.817964286560006 (change=0.7391300425523007 %)
[2025-11-24 04:18:33] 2025-11-24 09:18:00,428 | INFO     | left removable region: 20
[2025-11-24 04:18:33] 2025-11-24 09:18:00,429 | INFO     | sum of square deviations: 102307470114.20538
[2025-11-24 04:18:33] 2025-11-24 09:18:00,439 | INFO     | sum of deviations: 872686827230.9153
[2025-11-24 04:18:33] 2025-11-24 09:18:00,439 | INFO     | mean x: 1763954148.723589
[2025-11-24 04:18:33] 2025-11-24 09:18:00,439 | INFO     | mean y: 3202294.502170767
[2025-11-24 04:18:33] 2025-11-24 09:18:00,439 | INFO     | intersect: -15043397408.452036
[2025-11-24 04:18:33] 2025-11-24 09:18:00,440 | INFO     | chi2: 0.10594835932009623
[2025-11-24 04:18:33] 2025-11-24 09:18:00,440 | INFO     | current memory leak: 8.53 B/s (using 691 data points, chi2=0.11)
[2025-11-24 04:18:33] 2025-11-24 09:18:00,441 | INFO     | could have reported an average CPU frequency of 2156 MHz (28 samples)
[2025-11-24 04:18:33] 2025-11-24 09:18:00,441 | INFO     | ..............................
[2025-11-24 04:18:33] 2025-11-24 09:18:00,441 | INFO     | . Timing measurements:
[2025-11-24 04:18:33] 2025-11-24 09:18:00,441 | INFO     | . get job = 0 s
[2025-11-24 04:18:33] 2025-11-24 09:18:00,441 | INFO     | . initial setup = 2 s
[2025-11-24 04:18:33] 2025-11-24 09:18:00,441 | INFO     | . payload setup = 9 s
[2025-11-24 04:18:33] 2025-11-24 09:18:00,442 | INFO     | . stage-in = 0 s
[2025-11-24 04:18:33] 2025-11-24 09:18:00,442 | INFO     | . payload execution = 43986 s
[2025-11-24 04:18:33] 2025-11-24 09:18:00,442 | INFO     | . stage-out = 3 s
[2025-11-24 04:18:33] 2025-11-24 09:18:00,442 | INFO     | . log creation = 0 s
[2025-11-24 04:18:33] 2025-11-24 09:18:00,442 | INFO     | ..............................
[2025-11-24 04:18:33] 2025-11-24 09:18:00,536 | INFO     | 
[2025-11-24 04:18:33] 2025-11-24 09:18:00,537 | INFO     | job summary report
[2025-11-24 04:18:33] 2025-11-24 09:18:00,537 | INFO     | --------------------------------------------------
[2025-11-24 04:18:33] 2025-11-24 09:18:00,537 | INFO     | PanDA job id: 6895351764
[2025-11-24 04:18:33] 2025-11-24 09:18:00,537 | INFO     | task id: 47556137
[2025-11-24 04:18:33] 2025-11-24 09:18:00,537 | INFO     | errors: (none)
[2025-11-24 04:18:33] 2025-11-24 09:18:00,537 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 04:18:33] 2025-11-24 09:18:00,538 | INFO     | pilot state: finished 
[2025-11-24 04:18:33] 2025-11-24 09:18:00,538 | INFO     | transexitcode: 0
[2025-11-24 04:18:33] 2025-11-24 09:18:00,538 | INFO     | exeerrorcode: 0
[2025-11-24 04:18:33] 2025-11-24 09:18:00,538 | INFO     | exeerrordiag: 
[2025-11-24 04:18:33] 2025-11-24 09:18:00,538 | INFO     | exitcode: 0
[2025-11-24 04:18:33] 2025-11-24 09:18:00,538 | INFO     | exitmsg: OK
[2025-11-24 04:18:33] 2025-11-24 09:18:00,539 | INFO     | cpuconsumptiontime: 340511 s
[2025-11-24 04:18:33] 2025-11-24 09:18:00,539 | INFO     | nevents: 1000
[2025-11-24 04:18:33] 2025-11-24 09:18:00,539 | INFO     | neventsw: 0
[2025-11-24 04:18:33] 2025-11-24 09:18:00,539 | INFO     | pid: 11877
[2025-11-24 04:18:33] 2025-11-24 09:18:00,539 | INFO     | pgrp: 11877
[2025-11-24 04:18:33] 2025-11-24 09:18:00,539 | INFO     | corecount: 8
[2025-11-24 04:18:33] 2025-11-24 09:18:00,540 | INFO     | event service: False
[2025-11-24 04:18:33] 2025-11-24 09:18:00,540 | INFO     | sizes: {0: 2298636, 1: 2298835, 6: 2299097, 11: 2299125, 43999: 2344660, 44000: 2344659, 44004: 2353921, 44013: 2354111}
[2025-11-24 04:18:33] 2025-11-24 09:18:00,540 | INFO     | --------------------------------------------------
[2025-11-24 04:18:33] 2025-11-24 09:18:00,540 | INFO     | 
[2025-11-24 04:18:33] 2025-11-24 09:18:00,540 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 04:18:33] 2025-11-24 09:18:00,567 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 04:18:33] 2025-11-24 09:18:00,567 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 04:18:33] 2025-11-24 09:18:00,567 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 04:18:33] 2025-11-24 09:18:00,567 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 04:18:33] 2025-11-24 09:18:00,568 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 04:18:33] 2025-11-24 09:18:00,568 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 04:18:33] 2025-11-24 09:18:00,568 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 04:18:33] 2025-11-24 09:18:00,568 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 04:18:33] 2025-11-24 09:18:00,568 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 04:18:33] 2025-11-24 09:18:00,568 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 04:18:33] 2025-11-24 09:18:00,569 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 04:18:33] 2025-11-24 09:18:00,569 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 04:18:33] 2025-11-24 09:18:00,569 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 04:18:33] 2025-11-24 09:18:00,569 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 04:18:33] 2025-11-24 09:18:00,569 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 04:18:33] 2025-11-24 09:18:00,569 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 04:18:33] 2025-11-24 09:18:00,570 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 04:18:33] 2025-11-24 09:18:00,570 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 04:18:33] 2025-11-24 09:18:00,570 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 04:18:33] 2025-11-24 09:18:00,570 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 04:18:33] 2025-11-24 09:18:00,570 | INFO     | job 6895351764 has completed (purged errors)
[2025-11-24 04:18:33] 2025-11-24 09:18:00,571 | INFO     | overall cleanup function is called
[2025-11-24 04:18:33] 2025-11-24 09:18:01,586 | INFO     | --- collectZombieJob: --- 10, [11877]
[2025-11-24 04:18:33] 2025-11-24 09:18:01,587 | INFO     | zombie collector waiting for pid 11877
[2025-11-24 04:18:33] 2025-11-24 09:18:01,587 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 04:18:33] 2025-11-24 09:18:01,587 | INFO     | collected zombie processes
[2025-11-24 04:18:33] 2025-11-24 09:18:01,588 | INFO     | will attempt to kill all subprocesses of pid=11877
[2025-11-24 04:18:33] 2025-11-24 09:18:01,686 | INFO     | process IDs to be killed: [11877] (in reverse order)
[2025-11-24 04:18:33] 2025-11-24 09:18:01,741 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 04:18:33] 2025-11-24 09:18:01,741 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 04:18:33] 2025-11-24 09:18:01,746 | INFO     | did not find any defunct processes belonging to 11877
[2025-11-24 04:18:33] 2025-11-24 09:18:01,749 | INFO     | did not find any defunct processes belonging to 11877
[2025-11-24 04:18:33] 2025-11-24 09:18:01,752 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 04:18:33] 2025-11-24 09:18:01,753 | INFO     | ready for new job
[2025-11-24 04:18:33] 2025-11-24 09:18:01,753 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 04:18:33] 2025-11-24 09:18:01,756 | INFO     | ***************************************
[2025-11-24 04:18:33] 2025-11-24 09:18:01,757 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 04:18:33] 2025-11-24 09:18:01,757 | INFO     | ***************************************
[2025-11-24 04:18:33] 2025-11-24 09:18:01,757 | INFO     | 
[2025-11-24 04:18:33] 2025-11-24 09:18:01,757 | INFO     | architecture information:
[2025-11-24 04:18:33] 2025-11-24 09:18:01,758 | INFO     | executing command: cat /etc/os-release
[2025-11-24 04:18:33] 2025-11-24 09:18:01,776 | INFO     | cat /etc/os-release:
[2025-11-24 04:18:33] NAME="CentOS Linux"
[2025-11-24 04:18:33] VERSION="7 (Core)"
[2025-11-24 04:18:33] ID="centos"
[2025-11-24 04:18:33] ID_LIKE="rhel fedora"
[2025-11-24 04:18:33] VERSION_ID="7"
[2025-11-24 04:18:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 04:18:33] ANSI_COLOR="0;31"
[2025-11-24 04:18:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 04:18:33] HOME_URL="https://www.centos.org/"
[2025-11-24 04:18:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 04:18:33] 
[2025-11-24 04:18:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 04:18:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 04:18:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 04:18:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 04:18:33] 
[2025-11-24 04:18:33] 2025-11-24 09:18:01,777 | INFO     | ***************************************
[2025-11-24 04:18:33] 2025-11-24 09:18:02,280 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 04:18:33] 2025-11-24 09:18:02,300 | INFO     | sufficient remaining disk space (17440964608 B)
[2025-11-24 04:18:33] 2025-11-24 09:18:02,301 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 04:18:33] 2025-11-24 09:18:02,301 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 04:18:33] 2025-11-24 09:18:02,301 | INFO     | update_server=False
[2025-11-24 04:18:33] 2025-11-24 09:18:02,302 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 04:18:33] 2025-11-24 09:18:02,302 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 04:18:33] 2025-11-24 09:18:02,303 | INFO     | aborting loop
[2025-11-24 04:18:33] 2025-11-24 09:18:02,303 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 04:18:33] 2025-11-24 09:18:02,303 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 04:18:33] 2025-11-24 09:18:02,303 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 04:18:33] 2025-11-24 09:18:02,314 | INFO     | all payload control threads have been joined
[2025-11-24 04:18:33] 2025-11-24 09:18:02,667 | INFO     | all data control threads have been joined
[2025-11-24 04:18:33] 2025-11-24 09:18:03,307 | INFO     | [job] retrieve thread has finished
[2025-11-24 04:18:33] 2025-11-24 09:18:03,310 | INFO     | [job] queue monitor thread has finished
[2025-11-24 04:18:33] 2025-11-24 09:18:03,311 | INFO     | [job] job monitor thread has finished
[2025-11-24 04:18:33] 2025-11-24 09:18:03,319 | INFO     | [payload] control thread has finished
[2025-11-24 04:18:33] 2025-11-24 09:18:03,457 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 04:18:33] 2025-11-24 09:18:03,519 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 04:18:33] 2025-11-24 09:18:03,525 | INFO     | [data] copytool_in thread has finished
[2025-11-24 04:18:33] 2025-11-24 09:18:03,574 | INFO     | [payload] failed_post thread has finished
[2025-11-24 04:18:33] 2025-11-24 09:18:03,610 | INFO     | all job control threads have been joined
[2025-11-24 04:18:33] 2025-11-24 09:18:03,668 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 04:18:33] 2025-11-24 09:18:03,669 | INFO     | [data] control thread has finished
[2025-11-24 04:18:33] 2025-11-24 09:18:04,057 | INFO     | [job] validate thread has finished
[2025-11-24 04:18:33] 2025-11-24 09:18:04,310 | INFO     | [data] copytool_out thread has finished
[2025-11-24 04:18:33] 2025-11-24 09:18:04,615 | INFO     | [job] control thread has finished
[2025-11-24 04:18:33] 2025-11-24 09:18:04,730 | INFO     | [payload] validate_post thread has finished
[2025-11-24 04:18:33] 2025-11-24 09:18:04,747 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 04:18:33] 2025-11-24 09:18:06,305 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 04:18:33] 2025-11-24 09:18:23,347 | INFO     | [monitor] cgroup control has ended
[2025-11-24 04:18:33] 2025-11-24 09:18:24,465 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139801602328384)>', '<ExcThread(monitor, started 139800564717312)>']
[2025-11-24 04:18:33] 2025-11-24 09:18:29,477 | INFO     | all workflow threads have been joined
[2025-11-24 04:18:33] 2025-11-24 09:18:29,477 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 04:18:33] 2025-11-24 09:18:29,478 | INFO     | traces error code: 0
[2025-11-24 04:18:33] 2025-11-24 09:18:29,479 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 04:18:33] 2025-11-24 09:18:33,496 | INFO     | PID=5501 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-24 04:18:33] 2025-11-24 09:18:33,497 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 04:18:33] 2025-11-24 09:18:33,497 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 04:18:33] 2025-11-24 09:18:33,497 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 04:18:33] 2025-11-24 09:18:33,497 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 04:18:33] 2025-11-24 09:18:33,497 | INFO     | [monitor] control thread has ended
[2025-11-24 04:18:33] 2025-11-24 09:18:33,605 [wrapper] ==== pilot stdout END ====
[2025-11-24 04:18:33] 2025-11-24 09:18:33,611 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 04:18:33] 2025-11-24 09:18:33,616 [wrapper] pilotpid: 5501
[2025-11-24 04:18:33] 2025-11-24 09:18:33,621 [wrapper] Pilot exit status: 0
[2025-11-24 04:18:33] 2025-11-24 09:18:33,638 [wrapper] pandaids: 6895351764
[2025-11-24 04:18:33] 2025-11-24 09:18:33,686 [wrapper] cleanup supervisor_pilot  7768 5502
[2025-11-24 04:18:33] 2025-11-24 09:18:33,691 [wrapper] Test setup, not cleaning
[2025-11-24 04:18:33] 2025-11-24 09:18:33,696 [wrapper] apfmon messages muted
[2025-11-24 04:18:33] 2025-11-24 09:18:33,701 [wrapper] ==== wrapper stdout END ====
[2025-11-24 04:18:33] 2025-11-24 09:18:33,706 [wrapper] ==== wrapper stderr END ====
[2025-11-24 04:18:33]  *** Error codes and diagnostics ***
[2025-11-24 04:18:33]     "exeErrorCode": 0,
[2025-11-24 04:18:33]     "exeErrorDiag": "",
[2025-11-24 04:18:33]     "pilotErrorCode": 0,
[2025-11-24 04:18:33]     "pilotErrorDiag": "",
[2025-11-24 04:18:33]  *** Listing of results directory ***
[2025-11-24 04:18:33] total 1313652
[2025-11-24 04:18:33] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 20:11 queuedata.json
[2025-11-24 04:18:33] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 20:11 pilot3.tar.gz
[2025-11-24 04:18:33] -rwx------ 1 boincer umatlas     36292 Nov 22 20:11 runpilot2-wrapper.sh
[2025-11-24 04:18:33] -rw-r--r-- 1 boincer umatlas       100 Nov 23 16:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 04:18:33] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 16:03 run_atlas
[2025-11-24 04:18:33] -rw-r--r-- 1 boincer umatlas       105 Nov 23 16:03 job.xml
[2025-11-24 04:18:33] -rw-r--r-- 2 boincer umatlas 409217744 Nov 23 16:03 EVNT.47483658._000564.pool.root.1
[2025-11-24 04:18:33] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 16:03 start_atlas.sh
[2025-11-24 04:18:33] drwxrwx--x 2 boincer umatlas      4096 Nov 23 16:03 shared
[2025-11-24 04:18:33] -rw-r--r-- 2 boincer umatlas    590100 Nov 23 16:03 input.tar.gz
[2025-11-24 04:18:33] -rw-r--r-- 1 boincer umatlas         0 Nov 23 16:03 boinc_lockfile
[2025-11-24 04:18:33] -rw-r--r-- 1 boincer umatlas      2786 Nov 23 16:03 pandaJob.out
[2025-11-24 04:18:33] -rw------- 1 boincer umatlas        57 Nov 23 16:03 setup.sh.local
[2025-11-24 04:18:33] -rw------- 1 boincer umatlas    989786 Nov 23 16:04 agis_schedconf.cvmfs.json
[2025-11-24 04:18:33] drwx------ 5 boincer umatlas      4096 Nov 23 16:04 pilot3
[2025-11-24 04:18:33] -rw-r--r-- 1 boincer umatlas       532 Nov 24 04:07 boinc_task_state.xml
[2025-11-24 04:18:33] -rw-r--r-- 1 boincer umatlas      5912 Nov 24 04:10 init_data.xml
[2025-11-24 04:18:33] -rw------- 1 boincer umatlas 915982028 Nov 24 04:17 HITS.47556137._005594.pool.root.1
[2025-11-24 04:18:33] -rw------- 1 boincer umatlas      1064 Nov 24 04:17 memory_monitor_summary.json
[2025-11-24 04:18:33] -rw------- 1 boincer umatlas   1526164 Nov 24 04:17 agis_ddmendpoints.agis.ALL.json
[2025-11-24 04:18:33] -rw------- 1 boincer umatlas   1968766 Nov 24 04:17 log.47556137._005594.job.log.tgz.1
[2025-11-24 04:18:33] -rw------- 1 boincer umatlas      8658 Nov 24 04:18 heartbeat.json
[2025-11-24 04:18:33] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 04:18 boinc_mmap_file
[2025-11-24 04:18:33] -rw-r--r-- 1 boincer umatlas        29 Nov 24 04:18 wrapper_checkpoint.txt
[2025-11-24 04:18:33] -rw------- 1 boincer umatlas        95 Nov 24 04:18 pilot_heartbeat.json
[2025-11-24 04:18:33] -rw------- 1 boincer umatlas       744 Nov 24 04:18 pilotlog.txt
[2025-11-24 04:18:33] -rw------- 1 boincer umatlas   6062110 Nov 24 04:18 log.47556137._005594.job.log.1
[2025-11-24 04:18:33] -rw------- 1 boincer umatlas       353 Nov 24 04:18 output.list
[2025-11-24 04:18:33] -rw-r--r-- 1 boincer umatlas       620 Nov 24 04:18 runtime_log
[2025-11-24 04:18:33] -rw------- 1 boincer umatlas   8048640 Nov 24 04:18 result.tar.gz
[2025-11-24 04:18:33] -rw------- 1 boincer umatlas       668 Nov 24 04:18 XJ6KDmZoDh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjVKKDmr7UrQm.diag
[2025-11-24 04:18:33] -rw-r--r-- 1 boincer umatlas      9343 Nov 24 04:18 runtime_log.err
[2025-11-24 04:18:33] -rw-r--r-- 1 boincer umatlas     21400 Nov 24 04:18 stderr.txt
[2025-11-24 04:18:33] HITS file was successfully produced:
[2025-11-24 04:18:33] -rw------- 1 boincer umatlas 915982028 Nov 24 04:17 shared/HITS.pool.root.1
[2025-11-24 04:18:33]  *** Contents of shared directory: ***
[2025-11-24 04:18:33] total 1302604
[2025-11-24 04:18:33] -rw-r--r-- 2 boincer umatlas 409217744 Nov 23 16:03 ATLAS.root_0
[2025-11-24 04:18:33] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 16:03 start_atlas.sh
[2025-11-24 04:18:33] -rw-r--r-- 2 boincer umatlas    590100 Nov 23 16:03 input.tar.gz
[2025-11-24 04:18:33] -rw------- 1 boincer umatlas 915982028 Nov 24 04:17 HITS.pool.root.1
[2025-11-24 04:18:33] -rw------- 1 boincer umatlas   8048640 Nov 24 04:18 result.tar.gz
04:18:34 (1604): run_atlas exited; CPU time 338224.341926
04:18:34 (1604): called boinc_finish(0)

</stderr_txt>
]]>

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