Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:00:56 (892116): wrapper (7.7.26015): starting
12:00:56 (892116): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 12:00:56] Arguments: --nthreads 12
[2025-11-24 12:00:56] Threads: 12
[2025-11-24 12:00:56] Checking for CVMFS
[2025-11-24 12:00:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 12:00:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 12:00:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 12:00:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 12:00:57] 2.13.3.0 9060 23380 389080 153242 2 83 24993022 46080001 7180 130560 0 130529530 99.876 44980231 26070 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-11-24 12:00:57] CVMFS is ok
[2025-11-24 12:00:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 12:00:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 12:00:57] Further information can be found at the LHC@home message board.
[2025-11-24 12:00:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 12:00:57] Checking for apptainer binary...
[2025-11-24 12:00:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 12:00:57] Running /usr/bin/apptainer --version
[2025-11-24 12:00:57] apptainer version 1.4.3-1.el9
[2025-11-24 12:00:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 12:00:57] mff2104.farm.particle.cz
[2025-11-24 12:00:57] apptainer works
[2025-11-24 12:00:57] Set ATHENA_PROC_NUMBER=12
[2025-11-24 12:00:57] Set ATHENA_CORE_NUMBER=12
[2025-11-24 12:00:57] Starting ATLAS job with PandaID=6895333381
[2025-11-24 12:00:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 17:31:49]  *** The last 200 lines of the pilot log: ***
[2025-11-24 17:31:49] 2025-11-24 16:30:46,159 | INFO     | time since job start (19776s) is within the limit (172800.0s)
[2025-11-24 17:31:49] 2025-11-24 16:30:47,468 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 17:31:49] 2025-11-24 16:30:47,483 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2750.593885416667
[2025-11-24 17:31:49] 2025-11-24 16:30:47,501 | INFO     | using path: /scratch/.boinc/slots/6/PanDA_Pilot-6895333381/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 17:31:49] 2025-11-24 16:30:47,501 | INFO     | extracted standard info from prmon json
[2025-11-24 17:31:49] 2025-11-24 16:30:47,501 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 17:31:49] 2025-11-24 16:30:47,501 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 17:31:49] 2025-11-24 16:30:47,507 | INFO     | fitting pss+swap vs Time
[2025-11-24 17:31:49] 2025-11-24 16:30:47,507 | INFO     | sum of square deviations: 10546582818.996906
[2025-11-24 17:31:49] 2025-11-24 16:30:47,510 | INFO     | sum of deviations: 235369216175.04294
[2025-11-24 17:31:49] 2025-11-24 16:30:47,510 | INFO     | mean x: 1763991952.5030863
[2025-11-24 17:31:49] 2025-11-24 16:30:47,511 | INFO     | mean y: 3435511.9567901236
[2025-11-24 17:31:49] 2025-11-24 16:30:47,511 | INFO     | intersect: -39363761458.409775
[2025-11-24 17:31:49] 2025-11-24 16:30:47,511 | INFO     | chi2: 5.279711564755095
[2025-11-24 17:31:49] 2025-11-24 16:30:47,511 | INFO     | sum of square deviations: 10065910133.88715
[2025-11-24 17:31:49] 2025-11-24 16:30:47,514 | INFO     | sum of deviations: 360876816609.5298
[2025-11-24 17:31:49] 2025-11-24 16:30:47,514 | INFO     | mean x: 1763991800.0188088
[2025-11-24 17:31:49] 2025-11-24 16:30:47,514 | INFO     | mean y: 3475305.078369906
[2025-11-24 17:31:49] 2025-11-24 16:30:47,515 | INFO     | intersect: -63238073332.73692
[2025-11-24 17:31:49] 2025-11-24 16:30:47,515 | INFO     | chi2: 2.1812683479988246
[2025-11-24 17:31:49] 2025-11-24 16:30:47,515 | INFO     | current chi2=2.1812683479988246 (change=58.685842564583254 %)
[2025-11-24 17:31:49] 2025-11-24 16:30:47,516 | INFO     | sum of square deviations: 9599977766.38528
[2025-11-24 17:31:49] 2025-11-24 16:30:47,518 | INFO     | sum of deviations: 356774284032.226
[2025-11-24 17:31:49] 2025-11-24 16:30:47,518 | INFO     | mean x: 1763991647.5191083
[2025-11-24 17:31:49] 2025-11-24 16:30:47,518 | INFO     | mean y: 3473927.378980892
[2025-11-24 17:31:49] 2025-11-24 16:30:47,519 | INFO     | intersect: -65553642182.42501
[2025-11-24 17:31:49] 2025-11-24 16:30:47,519 | INFO     | chi2: 2.1196658840414835
[2025-11-24 17:31:49] 2025-11-24 16:30:47,519 | INFO     | current chi2=2.1196658840414835 (change=2.8241579727619257 %)
[2025-11-24 17:31:49] 2025-11-24 16:30:47,519 | INFO     | right removable region: 313
[2025-11-24 17:31:49] 2025-11-24 16:30:47,520 | INFO     | sum of square deviations: 10065751047.949823
[2025-11-24 17:31:49] 2025-11-24 16:30:47,522 | INFO     | sum of deviations: 138362348369.7835
[2025-11-24 17:31:49] 2025-11-24 16:30:47,522 | INFO     | mean x: 1763992105.0125391
[2025-11-24 17:31:49] 2025-11-24 16:30:47,522 | INFO     | mean y: 3466136.304075235
[2025-11-24 17:31:49] 2025-11-24 16:30:47,523 | INFO     | intersect: -24244112508.610306
[2025-11-24 17:31:49] 2025-11-24 16:30:47,523 | INFO     | chi2: 3.27506783539131
[2025-11-24 17:31:49] 2025-11-24 16:30:47,523 | INFO     | current chi2=3.27506783539131 (change=37.96881145450931 %)
[2025-11-24 17:31:49] 2025-11-24 16:30:47,523 | INFO     | sum of square deviations: 9599815510.44901
[2025-11-24 17:31:49] 2025-11-24 16:30:47,526 | INFO     | sum of deviations: 118251352509.94269
[2025-11-24 17:31:49] 2025-11-24 16:30:47,526 | INFO     | mean x: 1763992257.512739
[2025-11-24 17:31:49] 2025-11-24 16:30:47,526 | INFO     | mean y: 3472704.7643312104
[2025-11-24 17:31:49] 2025-11-24 16:30:47,526 | INFO     | intersect: -21725535528.873264
[2025-11-24 17:31:49] 2025-11-24 16:30:47,527 | INFO     | chi2: 3.249121386683369
[2025-11-24 17:31:49] 2025-11-24 16:30:47,527 | INFO     | current chi2=3.249121386683369 (change=0.7922415660389126 %)
[2025-11-24 17:31:49] 2025-11-24 16:30:47,527 | INFO     | left removable region: 20
[2025-11-24 17:31:49] 2025-11-24 16:30:47,527 | INFO     | sum of square deviations: 7799763178.723568
[2025-11-24 17:31:49] 2025-11-24 16:30:47,529 | INFO     | sum of deviations: 207066374640.47772
[2025-11-24 17:31:49] 2025-11-24 16:30:47,529 | INFO     | mean x: 1763992227.0307167
[2025-11-24 17:31:49] 2025-11-24 16:30:47,530 | INFO     | mean y: 3524156.0580204776
[2025-11-24 17:31:49] 2025-11-24 16:30:47,530 | INFO     | intersect: -46826548369.939926
[2025-11-24 17:31:49] 2025-11-24 16:30:47,530 | INFO     | chi2: 0.028159979495699206
[2025-11-24 17:31:49] 2025-11-24 16:30:47,530 | INFO     | current memory leak: 26.55 B/s (using 293 data points, chi2=0.03)
[2025-11-24 17:31:49] 2025-11-24 16:30:47,531 | INFO     | could have reported an average CPU frequency of 2730 MHz (14 samples)
[2025-11-24 17:31:49] 2025-11-24 16:30:47,531 | INFO     | ..............................
[2025-11-24 17:31:49] 2025-11-24 16:30:47,531 | INFO     | . Timing measurements:
[2025-11-24 17:31:49] 2025-11-24 16:30:47,531 | INFO     | . get job = 0 s
[2025-11-24 17:31:49] 2025-11-24 16:30:47,531 | INFO     | . initial setup = 1 s
[2025-11-24 17:31:49] 2025-11-24 16:30:47,531 | INFO     | . payload setup = 6 s
[2025-11-24 17:31:49] 2025-11-24 16:30:47,531 | INFO     | . stage-in = 0 s
[2025-11-24 17:31:49] 2025-11-24 16:30:47,531 | INFO     | . payload execution = 19741 s
[2025-11-24 17:31:49] 2025-11-24 16:30:47,531 | INFO     | . stage-out = 2 s
[2025-11-24 17:31:49] 2025-11-24 16:30:47,532 | INFO     | . log creation = 0 s
[2025-11-24 17:31:49] 2025-11-24 16:30:47,532 | INFO     | ..............................
[2025-11-24 17:31:49] 2025-11-24 16:30:47,624 | INFO     | 
[2025-11-24 17:31:49] 2025-11-24 16:30:47,624 | INFO     | job summary report
[2025-11-24 17:31:49] 2025-11-24 16:30:47,624 | INFO     | --------------------------------------------------
[2025-11-24 17:31:49] 2025-11-24 16:30:47,624 | INFO     | PanDA job id: 6895333381
[2025-11-24 17:31:49] 2025-11-24 16:30:47,624 | INFO     | task id: 47556137
[2025-11-24 17:31:49] 2025-11-24 16:30:47,624 | INFO     | errors: (none)
[2025-11-24 17:31:49] 2025-11-24 16:30:47,624 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 17:31:49] 2025-11-24 16:30:47,624 | INFO     | pilot state: finished 
[2025-11-24 17:31:49] 2025-11-24 16:30:47,624 | INFO     | transexitcode: 0
[2025-11-24 17:31:49] 2025-11-24 16:30:47,625 | INFO     | exeerrorcode: 0
[2025-11-24 17:31:49] 2025-11-24 16:30:47,625 | INFO     | exeerrordiag: 
[2025-11-24 17:31:49] 2025-11-24 16:30:47,625 | INFO     | exitcode: 0
[2025-11-24 17:31:49] 2025-11-24 16:30:47,625 | INFO     | exitmsg: OK
[2025-11-24 17:31:49] 2025-11-24 16:30:47,625 | INFO     | cpuconsumptiontime: 226422 s
[2025-11-24 17:31:49] 2025-11-24 16:30:47,625 | INFO     | nevents: 1000
[2025-11-24 17:31:49] 2025-11-24 16:30:47,625 | INFO     | neventsw: 0
[2025-11-24 17:31:49] 2025-11-24 16:30:47,625 | INFO     | pid: 903283
[2025-11-24 17:31:49] 2025-11-24 16:30:47,625 | INFO     | pgrp: 903283
[2025-11-24 17:31:49] 2025-11-24 16:30:47,625 | INFO     | corecount: 12
[2025-11-24 17:31:49] 2025-11-24 16:30:47,625 | INFO     | event service: False
[2025-11-24 17:31:49] 2025-11-24 16:30:47,625 | INFO     | sizes: {0: 2298637, 1: 2298836, 6: 2299098, 11: 2299126, 19751: 2333470, 19754: 2343257, 19755: 2343441, 19760: 2343687}
[2025-11-24 17:31:49] 2025-11-24 16:30:47,626 | INFO     | --------------------------------------------------
[2025-11-24 17:31:49] 2025-11-24 16:30:47,626 | INFO     | 
[2025-11-24 17:31:49] 2025-11-24 16:30:47,626 | INFO     | executing command: ls -lF /scratch/.boinc/slots/6
[2025-11-24 17:31:49] 2025-11-24 16:30:47,650 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 17:31:49] 2025-11-24 16:30:47,650 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 17:31:49] 2025-11-24 16:30:47,650 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 17:31:49] 2025-11-24 16:30:47,650 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 17:31:49] 2025-11-24 16:30:47,651 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 17:31:49] 2025-11-24 16:30:47,651 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 17:31:49] 2025-11-24 16:30:47,651 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 17:31:49] 2025-11-24 16:30:47,651 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 17:31:49] 2025-11-24 16:30:47,651 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 17:31:49] 2025-11-24 16:30:47,651 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 17:31:49] 2025-11-24 16:30:47,651 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 17:31:49] 2025-11-24 16:30:47,651 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 17:31:49] 2025-11-24 16:30:47,651 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 17:31:49] 2025-11-24 16:30:47,651 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 17:31:49] 2025-11-24 16:30:47,651 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 17:31:49] 2025-11-24 16:30:47,652 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 17:31:49] 2025-11-24 16:30:47,652 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 17:31:49] 2025-11-24 16:30:47,652 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 17:31:49] 2025-11-24 16:30:47,652 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 17:31:49] 2025-11-24 16:30:47,652 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 17:31:49] 2025-11-24 16:30:47,652 | INFO     | job 6895333381 has completed (purged errors)
[2025-11-24 17:31:49] 2025-11-24 16:30:47,652 | INFO     | overall cleanup function is called
[2025-11-24 17:31:49] 2025-11-24 16:30:48,675 | INFO     | --- collectZombieJob: --- 10, [903283]
[2025-11-24 17:31:49] 2025-11-24 16:30:48,675 | INFO     | zombie collector waiting for pid 903283
[2025-11-24 17:31:49] 2025-11-24 16:30:48,676 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 17:31:49] 2025-11-24 16:30:48,676 | INFO     | collected zombie processes
[2025-11-24 17:31:49] 2025-11-24 16:30:48,676 | INFO     | will attempt to kill all subprocesses of pid=903283
[2025-11-24 17:31:49] 2025-11-24 16:30:49,053 | INFO     | process IDs to be killed: [903283] (in reverse order)
[2025-11-24 17:31:49] 2025-11-24 16:30:49,176 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 17:31:49] 2025-11-24 16:30:49,176 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 17:31:49] 2025-11-24 16:30:49,189 | INFO     | did not find any defunct processes belonging to 903283
[2025-11-24 17:31:49] 2025-11-24 16:30:49,201 | INFO     | did not find any defunct processes belonging to 903283
[2025-11-24 17:31:49] 2025-11-24 16:30:49,202 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 17:31:49] 2025-11-24 16:30:49,202 | INFO     | ready for new job
[2025-11-24 17:31:49] 2025-11-24 16:30:49,202 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 17:31:49] 2025-11-24 16:30:49,212 | INFO     | ***************************************
[2025-11-24 17:31:49] 2025-11-24 16:30:49,212 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 17:31:49] 2025-11-24 16:30:49,212 | INFO     | ***************************************
[2025-11-24 17:31:49] 2025-11-24 16:30:49,212 | INFO     | 
[2025-11-24 17:31:49] 2025-11-24 16:30:49,219 | INFO     | architecture information:
[2025-11-24 17:31:49] 2025-11-24 16:30:49,219 | INFO     | executing command: cat /etc/os-release
[2025-11-24 17:31:49] 2025-11-24 16:30:49,240 | INFO     | cat /etc/os-release:
[2025-11-24 17:31:49] NAME="CentOS Linux"
[2025-11-24 17:31:49] VERSION="7 (Core)"
[2025-11-24 17:31:49] ID="centos"
[2025-11-24 17:31:49] ID_LIKE="rhel fedora"
[2025-11-24 17:31:49] VERSION_ID="7"
[2025-11-24 17:31:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 17:31:49] ANSI_COLOR="0;31"
[2025-11-24 17:31:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 17:31:49] HOME_URL="https://www.centos.org/"
[2025-11-24 17:31:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 17:31:49] 
[2025-11-24 17:31:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 17:31:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 17:31:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 17:31:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 17:31:49] 
[2025-11-24 17:31:49] 2025-11-24 16:30:49,241 | INFO     | ***************************************
[2025-11-24 17:31:49] 2025-11-24 16:30:49,743 | INFO     | executing command: df -mP /scratch/.boinc/slots/6
[2025-11-24 17:31:49] 2025-11-24 16:30:49,764 | INFO     | sufficient remaining disk space (1673795731456 B)
[2025-11-24 17:31:49] 2025-11-24 16:30:49,764 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 17:31:49] 2025-11-24 16:30:49,764 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 17:31:49] 2025-11-24 16:30:49,765 | INFO     | update_server=False
[2025-11-24 17:31:49] 2025-11-24 16:30:49,765 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 17:31:49] 2025-11-24 16:30:49,765 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:31:49] 2025-11-24 16:30:49,765 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 17:31:49] 2025-11-24 16:30:49,766 | INFO     | aborting loop
[2025-11-24 17:31:49] 2025-11-24 16:30:50,165 | INFO     | all payload control threads have been joined
[2025-11-24 17:31:49] 2025-11-24 16:30:50,432 | INFO     | all data control threads have been joined
[2025-11-24 17:31:49] 2025-11-24 16:30:50,767 | INFO     | [job] job monitor thread has finished
[2025-11-24 17:31:49] 2025-11-24 16:30:50,770 | INFO     | [job] retrieve thread has finished
[2025-11-24 17:31:49] 2025-11-24 16:30:50,914 | INFO     | all job control threads have been joined
[2025-11-24 17:31:49] 2025-11-24 16:30:51,070 | INFO     | [job] validate thread has finished
[2025-11-24 17:31:49] 2025-11-24 16:30:51,101 | INFO     | [payload] validate_post thread has finished
[2025-11-24 17:31:49] 2025-11-24 16:30:51,171 | INFO     | [payload] control thread has finished
[2025-11-24 17:31:49] 2025-11-24 16:30:51,438 | INFO     | [data] control thread has finished
[2025-11-24 17:31:49] 2025-11-24 16:30:51,572 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 17:31:49] 2025-11-24 16:30:51,712 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 17:31:49] 2025-11-24 16:30:51,772 | INFO     | [data] copytool_out thread has finished
[2025-11-24 17:31:49] 2025-11-24 16:30:51,803 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 17:31:49] 2025-11-24 16:30:51,919 | INFO     | [job] control thread has finished
[2025-11-24 17:31:49] 2025-11-24 16:30:52,063 | INFO     | [data] copytool_in thread has finished
[2025-11-24 17:31:49] 2025-11-24 16:30:52,142 | INFO     | [payload] failed_post thread has finished
[2025-11-24 17:31:49] 2025-11-24 16:30:52,635 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:31:49] 2025-11-24 16:30:52,732 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 17:31:49] 2025-11-24 16:30:53,639 | INFO     | [job] queue monitor thread has finished
[2025-11-24 17:31:49] 2025-11-24 16:30:56,737 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 17:31:49] 2025-11-24 16:30:59,903 | INFO     | job.realtimelogging is not enabled
[2025-11-24 17:31:49] 2025-11-24 16:31:00,910 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 17:31:49] 2025-11-24 16:31:12,130 [wrapper] supervise_pilot (15 min periods counter: 23)
[2025-11-24 17:31:49] 2025-11-24 16:31:19,725 | INFO     | PID=896212 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-24 17:31:49] 2025-11-24 16:31:19,725 | INFO     | .. there are 8 such processes running
[2025-11-24 17:31:49] 2025-11-24 16:31:19,726 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 17:31:49] 2025-11-24 16:31:19,726 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 17:31:49] 2025-11-24 16:31:19,726 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 17:31:49] 2025-11-24 16:31:43,036 | INFO     | [monitor] cgroup control has ended
[2025-11-24 17:31:49] 2025-11-24 16:31:44,214 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140062717953856)>', '<ExcThread(monitor, started 140062196999936)>']
[2025-11-24 17:31:49] 2025-11-24 16:31:44,835 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 17:31:49] 2025-11-24 16:31:44,836 | INFO     | [monitor] control thread has ended
[2025-11-24 17:31:49] 2025-11-24 16:31:49,231 | INFO     | all workflow threads have been joined
[2025-11-24 17:31:49] 2025-11-24 16:31:49,231 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 17:31:49] 2025-11-24 16:31:49,232 | INFO     | traces error code: 0
[2025-11-24 17:31:49] 2025-11-24 16:31:49,232 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 17:31:49] 2025-11-24 16:31:49,375 [wrapper] ==== pilot stdout END ====
[2025-11-24 17:31:49] 2025-11-24 16:31:49,379 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 17:31:49] 2025-11-24 16:31:49,383 [wrapper] pilotpid: 896212
[2025-11-24 17:31:49] 2025-11-24 16:31:49,386 [wrapper] Pilot exit status: 0
[2025-11-24 17:31:49] 2025-11-24 16:31:49,401 [wrapper] pandaids: 6895333381
[2025-11-24 17:31:49] 2025-11-24 16:31:49,486 [wrapper] cleanup supervisor_pilot 1386916 896213
[2025-11-24 17:31:49] 2025-11-24 16:31:49,490 [wrapper] Test setup, not cleaning
[2025-11-24 17:31:49] 2025-11-24 16:31:49,494 [wrapper] apfmon messages muted
[2025-11-24 17:31:49] 2025-11-24 16:31:49,497 [wrapper] ==== wrapper stdout END ====
[2025-11-24 17:31:49] 2025-11-24 16:31:49,501 [wrapper] ==== wrapper stderr END ====
[2025-11-24 17:31:49]  *** Error codes and diagnostics ***
[2025-11-24 17:31:49]     "exeErrorCode": 0,
[2025-11-24 17:31:49]     "exeErrorDiag": "",
[2025-11-24 17:31:49]     "pilotErrorCode": 0,
[2025-11-24 17:31:49]     "pilotErrorDiag": "",
[2025-11-24 17:31:49]  *** Listing of results directory ***
[2025-11-24 17:31:49] total 1309508
[2025-11-24 17:31:49] -rw-r--r-- 1 boinc boinc      5112 Nov 22 02:38 queuedata.json
[2025-11-24 17:31:49] -rw-r--r-- 1 boinc boinc    576529 Nov 22 02:38 pilot3.tar.gz
[2025-11-24 17:31:49] -rwx------ 1 boinc boinc     36292 Nov 22 02:39 runpilot2-wrapper.sh
[2025-11-24 17:31:49] -rw-r--r-- 1 boinc boinc       100 Nov 24 12:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 17:31:49] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 12:00 run_atlas
[2025-11-24 17:31:49] -rw-r--r-- 1 boinc boinc       105 Nov 24 12:00 job.xml
[2025-11-24 17:31:49] -rw-r--r-- 1 boinc boinc      6665 Nov 24 12:00 init_data.xml
[2025-11-24 17:31:49] -rw-r--r-- 2 boinc boinc 409403146 Nov 24 12:00 EVNT.47483658._000202.pool.root.1
[2025-11-24 17:31:49] -rw-r--r-- 2 boinc boinc     15847 Nov 24 12:00 start_atlas.sh
[2025-11-24 17:31:49] drwxrwx--x 2 boinc boinc      4096 Nov 24 12:00 shared
[2025-11-24 17:31:49] -rw-r--r-- 2 boinc boinc    590100 Nov 24 12:00 input.tar.gz
[2025-11-24 17:31:49] -rw-r--r-- 1 boinc boinc         0 Nov 24 12:00 boinc_lockfile
[2025-11-24 17:31:49] -rw-r--r-- 1 boinc boinc      2786 Nov 24 12:00 pandaJob.out
[2025-11-24 17:31:49] -rw------- 1 boinc boinc    989824 Nov 24 12:01 agis_schedconf.cvmfs.json
[2025-11-24 17:31:49] drwx------ 5 boinc boinc      4096 Nov 24 12:01 pilot3
[2025-11-24 17:31:49] -rw-r--r-- 1 boinc boinc       533 Nov 24 17:24 boinc_task_state.xml
[2025-11-24 17:31:49] -rw------- 1 boinc boinc 917993189 Nov 24 17:30 HITS.47556137._001994.pool.root.1
[2025-11-24 17:31:49] -rw------- 1 boinc boinc      1035 Nov 24 17:30 memory_monitor_summary.json
[2025-11-24 17:31:49] -rw------- 1 boinc boinc   1516227 Nov 24 17:30 agis_ddmendpoints.agis.ALL.json
[2025-11-24 17:31:49] -rw------- 1 boinc boinc   2070248 Nov 24 17:30 log.47556137._001994.job.log.tgz.1
[2025-11-24 17:31:49] -rw------- 1 boinc boinc      8608 Nov 24 17:30 heartbeat.json
[2025-11-24 17:31:49] -rw------- 1 boinc boinc        95 Nov 24 17:31 pilot_heartbeat.json
[2025-11-24 17:31:49] -rw-r--r-- 1 boinc boinc        29 Nov 24 17:31 wrapper_checkpoint.txt
[2025-11-24 17:31:49] -rw-r--r-- 1 boinc boinc      8192 Nov 24 17:31 boinc_mmap_file
[2025-11-24 17:31:49] -rw------- 1 boinc boinc      4897 Nov 24 17:31 pilotlog.txt
[2025-11-24 17:31:49] -rw------- 1 boinc boinc   2743818 Nov 24 17:31 log.47556137._001994.job.log.1
[2025-11-24 17:31:49] -rw------- 1 boinc boinc       353 Nov 24 17:31 output.list
[2025-11-24 17:31:49] -rw-r--r-- 1 boinc boinc       620 Nov 24 17:31 runtime_log
[2025-11-24 17:31:49] -rw------- 1 boinc boinc   4833280 Nov 24 17:31 result.tar.gz
[2025-11-24 17:31:49] -rw------- 1 boinc boinc       671 Nov 24 17:31 n6oNDm0lrg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLqJKDmg8WXLm.diag
[2025-11-24 17:31:49] -rw-r--r-- 1 boinc boinc      8881 Nov 24 17:31 runtime_log.err
[2025-11-24 17:31:49] -rw-r--r-- 1 boinc boinc     21285 Nov 24 17:31 stderr.txt
[2025-11-24 17:31:49] HITS file was successfully produced:
[2025-11-24 17:31:49] -rw------- 1 boinc boinc 917993189 Nov 24 17:30 shared/HITS.pool.root.1
[2025-11-24 17:31:49]  *** Contents of shared directory: ***
[2025-11-24 17:31:49] total 1301612
[2025-11-24 17:31:49] -rw-r--r-- 2 boinc boinc 409403146 Nov 24 12:00 ATLAS.root_0
[2025-11-24 17:31:49] -rw-r--r-- 2 boinc boinc     15847 Nov 24 12:00 start_atlas.sh
[2025-11-24 17:31:49] -rw-r--r-- 2 boinc boinc    590100 Nov 24 12:00 input.tar.gz
[2025-11-24 17:31:49] -rw------- 1 boinc boinc 917993189 Nov 24 17:30 HITS.pool.root.1
[2025-11-24 17:31:49] -rw------- 1 boinc boinc   4833280 Nov 24 17:31 result.tar.gz
17:31:51 (892116): run_atlas exited; CPU time 226354.487624
17:31:51 (892116): called boinc_finish(0)

</stderr_txt>
]]>

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