Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:08:53 (79547): wrapper (7.7.26015): starting
13:08:53 (79547): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 13:08:53] Arguments: --nthreads 12
[2025-11-23 13:08:53] Threads: 12
[2025-11-23 13:08:53] Checking for CVMFS
[2025-11-23 13:08:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 13:08:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 13:08:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 13:08:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 13:08:54] 2.11.5.0 2639569 24547 225000 153220 0 499 44581554 45568000 14523 130560 0 235725510 99.801 138475999 30208 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-23 13:08:54] CVMFS is ok
[2025-11-23 13:08:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 13:08:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 13:08:54] Further information can be found at the LHC@home message board.
[2025-11-23 13:08:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 13:08:54] Checking for apptainer binary...
[2025-11-23 13:08:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 13:08:54] Running /usr/bin/apptainer --version
[2025-11-23 13:08:54] apptainer version 1.4.1-1.el9
[2025-11-23 13:08:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 13:08:54] wns0026.triumf.lcg
[2025-11-23 13:08:54] apptainer works
[2025-11-23 13:08:54] Set ATHENA_PROC_NUMBER=12
[2025-11-23 13:08:54] Set ATHENA_CORE_NUMBER=12
[2025-11-23 13:08:54] Starting ATLAS job with PandaID=6895358159
[2025-11-23 13:08:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 13:14:16]  *** The last 200 lines of the pilot log: ***
[2025-11-23 13:14:16] 2025-11-23 21:13:08,720 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-23 13:14:16] 2025-11-23 21:13:08,721 | WARNING  | wrong length of table data, x=[1763932190.0, 1763932251.0], y=[1226.0, 831620.0] (must be same and length>=4)
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | could have reported an average CPU frequency of 2479 MHz (4 samples)
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | ..............................
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | . Timing measurements:
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | . get job = 0 s
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | . initial setup = 3 s
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | . payload setup = 10 s
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | . stage-in = 0 s
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | . payload execution = 78 s
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | . stage-out = 0 s
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | . log creation = 0 s
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | ..............................
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895358159/pilotlog.txt
[2025-11-23 13:14:16] 2025-11-23 21:13:08,734 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-23 13:14:16] - Log from pilotlog.txt -
[2025-11-23 13:14:16] 2025-11-23 21:13:08,719 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895358159/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 13:14:16] 2025-11-23 21:13:08,720 | INFO     | extracted standard info from prmon json
[2025-11-23 13:14:16] 2025-11-23 21:13:08,720 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 13:14:16] 2025-11-23 21:13:08,720 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 13:14:16] 2025-11-23 21:13:08,720 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-23 13:14:16] 2025-11-23 21:13:08,720 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-23 13:14:16] 2025-11-23 21:13:08,721 | WARNING  | wrong length of table data, x=[1763932190.0, 1763932251.0], y=[1226.0, 831620.0] (must be same and length>=4)
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | could have reported an average CPU frequency of 2479 MHz (4 samples)
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | ..............................
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | . Timing measurements:
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | . get job = 0 s
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | . initial setup = 3 s
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | . payload setup = 10 s
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | . stage-in = 0 s
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | . payload execution = 78 s
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | . stage-out = 0 s
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | . log creation = 0 s
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | ..............................
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895358159/pilotlog.txt
[2025-11-23 13:14:16] 2025-11-23 21:13:08,734 | WARNING  | 
[2025-11-23 13:14:16] [begin log extracts]
[2025-11-23 13:14:16] - Log from pilotlog.txt -
[2025-11-23 13:14:16] 2025-11-23 21:13:08,719 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895358159/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 13:14:16] 2025-11-23 21:13:08,720 | INFO     | extracted standard info from prmon json
[2025-11-23 13:14:16] 2025-11-23 21:13:08,720 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 13:14:16] 2025-11-23 21:13:08,720 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 13:14:16] 2025-11-23 21:13:08,720 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-23 13:14:16] 2025-11-23 21:13:08,720 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-23 13:14:16] 2025-11-23 21:13:08,721 | WARNING  | wrong length of table data, x=[1763932190.0, 1763932251.0], y=[1226.0, 831620.0] (must be same and length>=4)
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | could have reported an average CPU frequency of 2479 MHz (4 samples)
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | ..............................
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | . Timing measurements:
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | . get job = 0 s
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | . initial setup = 3 s
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | . payload setup = 10 s
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | . stage-in = 0 s
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | . payload execution = 78 s
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | . stage-out = 0 s
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | . log creation = 0 s
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | ..............................
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-23 13:14:16] 2025-11-23 21:13:08,722 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895358159/pilotlog.txt
[2025-11-23 13:14:16] [end log extracts]
[2025-11-23 13:14:16] 2025-11-23 21:13:08,734 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-23 13:14:16] 2025-11-23 21:13:08,735 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-23 13:14:16] 2025-11-23 21:13:08,775 | INFO     | time since job start (238s) is within the limit (172800.0s)
[2025-11-23 13:14:16] 2025-11-23 21:13:08,791 | INFO     | 
[2025-11-23 13:14:16] 2025-11-23 21:13:08,792 | INFO     | job summary report
[2025-11-23 13:14:16] 2025-11-23 21:13:08,792 | INFO     | --------------------------------------------------
[2025-11-23 13:14:16] 2025-11-23 21:13:08,792 | INFO     | PanDA job id: 6895358159
[2025-11-23 13:14:16] 2025-11-23 21:13:08,792 | INFO     | task id: 47556137
[2025-11-23 13:14:16] 2025-11-23 21:13:08,792 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-23 13:10:52,391 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-23 13:14:16] 2025-11-23 21:13:08,792 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-23 13:14:16] 2025-11-23 21:13:08,792 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 13:14:16] 2025-11-23 21:13:08,792 | INFO     | pilot state: failed 
[2025-11-23 13:14:16] 2025-11-23 21:13:08,792 | INFO     | transexitcode: 65
[2025-11-23 13:14:16] 2025-11-23 21:13:08,792 | INFO     | exeerrorcode: 65
[2025-11-23 13:14:16] 2025-11-23 21:13:08,792 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-23 13:14:16] 2025-11-23 21:13:08,792 | INFO     | exitcode: 65
[2025-11-23 13:14:16] 2025-11-23 21:13:08,792 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-23 13:14:16] 2025-11-23 21:13:08,792 | INFO     | cpuconsumptiontime: 44 s
[2025-11-23 13:14:16] 2025-11-23 21:13:08,792 | INFO     | nevents: 0
[2025-11-23 13:14:16] 2025-11-23 21:13:08,792 | INFO     | neventsw: 0
[2025-11-23 13:14:16] 2025-11-23 21:13:08,792 | INFO     | pid: 91939
[2025-11-23 13:14:16] 2025-11-23 21:13:08,792 | INFO     | pgrp: 91939
[2025-11-23 13:14:16] 2025-11-23 21:13:08,792 | INFO     | corecount: 12
[2025-11-23 13:14:16] 2025-11-23 21:13:08,792 | INFO     | event service: False
[2025-11-23 13:14:16] 2025-11-23 21:13:08,793 | INFO     | sizes: {0: 2298753, 1: 2298753, 10: 2299043, 11: 2299071, 92: 2324466, 94: 2328756, 97: 2328912, 221: 2329078}
[2025-11-23 13:14:16] 2025-11-23 21:13:08,793 | INFO     | --------------------------------------------------
[2025-11-23 13:14:16] 2025-11-23 21:13:08,793 | INFO     | 
[2025-11-23 13:14:16] 2025-11-23 21:13:08,793 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-23 13:14:16] 2025-11-23 21:13:08,806 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 13:14:16] 2025-11-23 21:13:08,807 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 13:14:16] 2025-11-23 21:13:08,807 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 13:14:16] 2025-11-23 21:13:08,807 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 13:14:16] 2025-11-23 21:13:08,807 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 13:14:16] 2025-11-23 21:13:08,807 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 13:14:16] 2025-11-23 21:13:08,807 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 13:14:16] 2025-11-23 21:13:08,807 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 13:14:16] 2025-11-23 21:13:08,807 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 13:14:16] 2025-11-23 21:13:08,807 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 13:14:16] 2025-11-23 21:13:08,807 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 13:14:16] 2025-11-23 21:13:08,807 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 13:14:16] 2025-11-23 21:13:08,807 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 13:14:16] 2025-11-23 21:13:08,807 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 13:14:16] 2025-11-23 21:13:08,807 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 13:14:16] 2025-11-23 21:13:08,807 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 13:14:16] 2025-11-23 21:13:08,807 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 13:14:16] 2025-11-23 21:13:08,807 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 13:14:16] 2025-11-23 21:13:08,808 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 13:14:16] 2025-11-23 21:13:08,808 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 13:14:16] 2025-11-23 21:13:08,808 | INFO     | job 6895358159 has completed (purged errors)
[2025-11-23 13:14:16] 2025-11-23 21:13:08,808 | INFO     | overall cleanup function is called
[2025-11-23 13:14:16] 2025-11-23 21:13:09,817 | INFO     | --- collectZombieJob: --- 10, [91939]
[2025-11-23 13:14:16] 2025-11-23 21:13:09,817 | INFO     | zombie collector waiting for pid 91939
[2025-11-23 13:14:16] 2025-11-23 21:13:09,817 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 13:14:16] 2025-11-23 21:13:09,817 | INFO     | collected zombie processes
[2025-11-23 13:14:16] 2025-11-23 21:13:09,817 | INFO     | will attempt to kill all subprocesses of pid=91939
[2025-11-23 13:14:16] 2025-11-23 21:13:09,978 | INFO     | process IDs to be killed: [91939] (in reverse order)
[2025-11-23 13:14:16] 2025-11-23 21:13:10,041 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 13:14:16] 2025-11-23 21:13:10,041 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 13:14:16] 2025-11-23 21:13:10,048 | INFO     | did not find any defunct processes belonging to 91939
[2025-11-23 13:14:16] 2025-11-23 21:13:10,055 | INFO     | did not find any defunct processes belonging to 91939
[2025-11-23 13:14:16] 2025-11-23 21:13:10,056 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 13:14:16] 2025-11-23 21:13:10,056 | INFO     | ready for new job
[2025-11-23 13:14:16] 2025-11-23 21:13:10,056 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 13:14:16] 2025-11-23 21:13:10,057 | INFO     | ***************************************
[2025-11-23 13:14:16] 2025-11-23 21:13:10,057 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 13:14:16] 2025-11-23 21:13:10,057 | INFO     | ***************************************
[2025-11-23 13:14:16] 2025-11-23 21:13:10,057 | INFO     | 
[2025-11-23 13:14:16] 2025-11-23 21:13:10,059 | INFO     | architecture information:
[2025-11-23 13:14:16] 2025-11-23 21:13:10,060 | INFO     | executing command: cat /etc/os-release
[2025-11-23 13:14:16] 2025-11-23 21:13:10,143 | INFO     | cat /etc/os-release:
[2025-11-23 13:14:16] NAME="CentOS Linux"
[2025-11-23 13:14:16] VERSION="7 (Core)"
[2025-11-23 13:14:16] ID="centos"
[2025-11-23 13:14:16] ID_LIKE="rhel fedora"
[2025-11-23 13:14:16] VERSION_ID="7"
[2025-11-23 13:14:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 13:14:16] ANSI_COLOR="0;31"
[2025-11-23 13:14:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 13:14:16] HOME_URL="https://www.centos.org/"
[2025-11-23 13:14:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 13:14:16] 
[2025-11-23 13:14:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 13:14:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 13:14:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 13:14:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 13:14:16] 
[2025-11-23 13:14:16] 2025-11-23 21:13:10,143 | INFO     | ***************************************
[2025-11-23 13:14:16] 2025-11-23 21:13:10,646 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-23 13:14:16] 2025-11-23 21:13:10,730 | INFO     | sufficient remaining disk space (1718733504512 B)
[2025-11-23 13:14:16] 2025-11-23 21:13:10,731 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 13:14:16] 2025-11-23 21:13:10,731 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 13:14:16] 2025-11-23 21:13:10,731 | INFO     | update_server=False
[2025-11-23 13:14:16] 2025-11-23 21:13:10,731 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 13:14:16] 2025-11-23 21:13:10,731 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-23 13:14:16] 2025-11-23 21:13:10,732 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 13:14:16] 2025-11-23 21:13:10,732 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 13:14:16] 2025-11-23 21:13:10,732 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 13:14:16] 2025-11-23 21:13:10,732 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 13:14:16] 2025-11-23 21:13:10,740 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 13:14:16] 2025-11-23 21:13:10,810 | INFO     | all job control threads have been joined
[2025-11-23 13:14:16] 2025-11-23 21:13:11,122 | INFO     | all payload control threads have been joined
[2025-11-23 13:14:16] 2025-11-23 21:13:11,358 | INFO     | all data control threads have been joined
[2025-11-23 13:14:16] 2025-11-23 21:13:11,713 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 13:14:16] 2025-11-23 21:13:11,713 | INFO     | aborting loop
[2025-11-23 13:14:16] 2025-11-23 21:13:11,737 | INFO     | [job] retrieve thread has finished
[2025-11-23 13:14:16] 2025-11-23 21:13:11,739 | INFO     | [job] queue monitor thread has finished
[2025-11-23 13:14:16] 2025-11-23 21:13:11,742 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 13:14:16] 2025-11-23 21:13:11,816 | INFO     | [job] control thread has finished
[2025-11-23 13:14:16] 2025-11-23 21:13:12,035 | INFO     | [job] validate thread has finished
[2025-11-23 13:14:16] 2025-11-23 21:13:12,129 | INFO     | [payload] control thread has finished
[2025-11-23 13:14:16] 2025-11-23 21:13:12,217 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 13:14:16] 2025-11-23 21:13:12,318 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 13:14:16] 2025-11-23 21:13:12,363 | INFO     | [data] control thread has finished
[2025-11-23 13:14:16] 2025-11-23 21:13:12,521 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 13:14:16] 2025-11-23 21:13:12,621 | INFO     | [payload] failed_post thread has finished
[2025-11-23 13:14:16] 2025-11-23 21:13:12,693 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 13:14:16] 2025-11-23 21:13:12,718 | INFO     | [job] job monitor thread has finished
[2025-11-23 13:14:16] 2025-11-23 21:13:12,748 | INFO     | [data] copytool_out thread has finished
[2025-11-23 13:14:16] 2025-11-23 21:13:13,070 | INFO     | [data] copytool_in thread has finished
[2025-11-23 13:14:16] 2025-11-23 21:13:13,147 | INFO     | [payload] validate_post thread has finished
[2025-11-23 13:14:16] 2025-11-23 21:13:16,700 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 13:14:16] 2025-11-23 21:14:10,083 | INFO     | [monitor] cgroup control has ended
[2025-11-23 13:14:16] 2025-11-23 21:14:10,729 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140678404683584)>', '<ExcThread(monitor, started 140677862110976)>']
[2025-11-23 13:14:16] 2025-11-23 21:14:11,084 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 13:14:16] 2025-11-23 21:14:11,084 | INFO     | [monitor] control thread has ended
[2025-11-23 13:14:16] 2025-11-23 21:14:15,755 | INFO     | all workflow threads have been joined
[2025-11-23 13:14:16] 2025-11-23 21:14:15,755 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 13:14:16] 2025-11-23 21:14:15,755 | INFO     | traces error code: 0
[2025-11-23 13:14:16] 2025-11-23 21:14:15,755 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 13:14:16] 2025-11-23 21:14:15,930 [wrapper] ==== pilot stdout END ====
[2025-11-23 13:14:16] 2025-11-23 21:14:15,932 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 13:14:16] 2025-11-23 21:14:15,934 [wrapper] pilotpid: 84315
[2025-11-23 13:14:16] 2025-11-23 21:14:15,936 [wrapper] Pilot exit status: 0
[2025-11-23 13:14:16] 2025-11-23 21:14:15,950 [wrapper] pandaids: 6895358159
[2025-11-23 13:14:16] 2025-11-23 21:14:15,990 [wrapper] cleanup supervisor_pilot   84321 84316
[2025-11-23 13:14:16] 2025-11-23 21:14:15,993 [wrapper] Test setup, not cleaning
[2025-11-23 13:14:16] 2025-11-23 21:14:15,996 [wrapper] apfmon messages muted
[2025-11-23 13:14:16] 2025-11-23 21:14:15,998 [wrapper] ==== wrapper stdout END ====
[2025-11-23 13:14:16] 2025-11-23 21:14:16,000 [wrapper] ==== wrapper stderr END ====
[2025-11-23 13:14:16]  *** Error codes and diagnostics ***
[2025-11-23 13:14:16]     "exeErrorCode": 65,
[2025-11-23 13:14:16]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-23 13:14:16]     "pilotErrorCode": 1305,
[2025-11-23 13:14:16]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-23 13:14:16]  *** Listing of results directory ***
[2025-11-23 13:14:16] total 401008
[2025-11-23 13:14:16] -rw-r--r--. 1 boinc boinc    576529 Nov 23 04:14 pilot3.tar.gz
[2025-11-23 13:14:16] -rwx------. 1 boinc boinc     36292 Nov 23 04:24 runpilot2-wrapper.sh
[2025-11-23 13:14:16] -rw-r--r--. 1 boinc boinc      5112 Nov 23 04:24 queuedata.json
[2025-11-23 13:14:16] -rw-r--r--. 1 boinc boinc       100 Nov 23 13:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 13:14:16] -rwxr-xr-x. 1 boinc boinc      7986 Nov 23 13:08 run_atlas
[2025-11-23 13:14:16] -rw-r--r--. 1 boinc boinc       105 Nov 23 13:08 job.xml
[2025-11-23 13:14:16] -rw-r--r--. 1 boinc boinc      6594 Nov 23 13:08 init_data.xml
[2025-11-23 13:14:16] -rw-r--r--. 2 boinc boinc 406426515 Nov 23 13:08 EVNT.47483658._000729.pool.root.1
[2025-11-23 13:14:16] -rw-r--r--. 2 boinc boinc     15847 Nov 23 13:08 start_atlas.sh
[2025-11-23 13:14:16] drwxrwx--x. 2 boinc boinc      4096 Nov 23 13:08 shared
[2025-11-23 13:14:16] -rw-r--r--. 2 boinc boinc    590098 Nov 23 13:08 input.tar.gz
[2025-11-23 13:14:16] -rw-r--r--. 1 boinc boinc         0 Nov 23 13:08 boinc_lockfile
[2025-11-23 13:14:16] -rw-r--r--. 1 boinc boinc      2785 Nov 23 13:08 pandaJob.out
[2025-11-23 13:14:16] -rw-------. 1 boinc boinc    989786 Nov 23 13:09 agis_schedconf.cvmfs.json
[2025-11-23 13:14:16] -rw-------. 1 boinc boinc   1526164 Nov 23 13:09 agis_ddmendpoints.agis.ALL.json
[2025-11-23 13:14:16] drwx------. 5 boinc boinc      4096 Nov 23 13:09 pilot3
[2025-11-23 13:14:16] -rw-r--r--. 1 boinc boinc       523 Nov 23 13:10 boinc_task_state.xml
[2025-11-23 13:14:16] -rw-------. 1 boinc boinc       989 Nov 23 13:10 memory_monitor_summary.json
[2025-11-23 13:14:16] -rw-------. 1 boinc boinc     48596 Nov 23 13:11 log.47556137._007245.job.log.tgz.1
[2025-11-23 13:14:16] -rw-------. 1 boinc boinc        95 Nov 23 13:12 pilot_heartbeat.json
[2025-11-23 13:14:16] -rw-------. 1 boinc boinc     10333 Nov 23 13:13 heartbeat.json
[2025-11-23 13:14:16] -rw-r--r--. 1 boinc boinc      8192 Nov 23 13:13 boinc_mmap_file
[2025-11-23 13:14:16] -rw-r--r--. 1 boinc boinc        23 Nov 23 13:13 wrapper_checkpoint.txt
[2025-11-23 13:14:16] -rw-------. 1 boinc boinc      4551 Nov 23 13:14 pilotlog.txt
[2025-11-23 13:14:16] -rw-------. 1 boinc boinc     97279 Nov 23 13:14 log.47556137._007245.job.log.1
[2025-11-23 13:14:16] -rw-------. 1 boinc boinc       186 Nov 23 13:14 output.list
[2025-11-23 13:14:16] -rw-r--r--. 1 boinc boinc       620 Nov 23 13:14 runtime_log
[2025-11-23 13:14:16] -rw-------. 1 boinc boinc    163840 Nov 23 13:14 result.tar.gz
[2025-11-23 13:14:16] -rw-r--r--. 1 boinc boinc      8636 Nov 23 13:14 runtime_log.err
[2025-11-23 13:14:16] -rw-------. 1 boinc boinc       645 Nov 23 13:14 RBMMDmtJOh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTXIKDmuYDBvm.diag
[2025-11-23 13:14:16] -rw-r--r--. 1 boinc boinc     22401 Nov 23 13:14 stderr.txt
[2025-11-23 13:14:16] No HITS result produced
[2025-11-23 13:14:16]  *** Contents of shared directory: ***
[2025-11-23 13:14:16] total 397664
[2025-11-23 13:14:16] -rw-r--r--. 2 boinc boinc 406426515 Nov 23 13:08 ATLAS.root_0
[2025-11-23 13:14:16] -rw-r--r--. 2 boinc boinc     15847 Nov 23 13:08 start_atlas.sh
[2025-11-23 13:14:16] -rw-r--r--. 2 boinc boinc    590098 Nov 23 13:08 input.tar.gz
[2025-11-23 13:14:16] -rw-------. 1 boinc boinc    163840 Nov 23 13:14 result.tar.gz
13:14:17 (79547): run_atlas exited; CPU time 44.937210
13:14:17 (79547): called boinc_finish(0)

</stderr_txt>
]]>

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