Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:23:52 (1517514): wrapper (7.7.26015): starting
09:23:52 (1517514): wrapper: running run_atlas (--nthreads 3)
[2025-11-26 09:23:52] Arguments: --nthreads 3
[2025-11-26 09:23:52] Threads: 3
[2025-11-26 09:23:52] Checking for CVMFS
[2025-11-26 09:23:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 09:23:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 09:23:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 09:23:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 09:23:52] 2.9.2.0 28796 11029 93028 153315 2 81 30724159 36864001 0 130560 1 4134010 99.936 564457 769 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 09:23:52] CVMFS is ok
[2025-11-26 09:23:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 09:23:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 09:23:52] Further information can be found at the LHC@home message board.
[2025-11-26 09:23:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 09:23:52] Checking for apptainer binary...
[2025-11-26 09:23:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 09:23:52] Running /usr/bin/apptainer --version
[2025-11-26 09:23:52] apptainer version 1.4.1-1.1
[2025-11-26 09:23:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 09:23:52] thA331b
[2025-11-26 09:23:52] apptainer works
[2025-11-26 09:23:52] Set ATHENA_PROC_NUMBER=3
[2025-11-26 09:23:52] Set ATHENA_CORE_NUMBER=3
[2025-11-26 09:23:52] Starting ATLAS job with PandaID=6895351565
[2025-11-26 09:23:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 17:19:34]  *** The last 200 lines of the pilot log: ***
[2025-11-26 17:19:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 17:19:34] 
[2025-11-26 17:19:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 17:19:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 17:19:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 17:19:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 17:19:34] 
[2025-11-26 17:19:34] 2025-11-26 16:18:32,778 | INFO     | ***************************************
[2025-11-26 17:19:34] 2025-11-26 16:18:33,281 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-26 17:19:34] 2025-11-26 16:18:33,295 | INFO     | sufficient remaining disk space (225615806464 B)
[2025-11-26 17:19:34] 2025-11-26 16:18:33,295 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 17:19:34] 2025-11-26 16:18:33,295 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 17:19:34] 2025-11-26 16:18:33,295 | INFO     | update_server=False
[2025-11-26 17:19:34] 2025-11-26 16:18:33,295 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 17:19:34] 2025-11-26 16:18:33,295 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:19:34] 2025-11-26 16:18:33,295 | INFO     | aborting loop
[2025-11-26 17:19:34] 2025-11-26 16:18:33,295 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:19:34] 2025-11-26 16:18:33,295 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 17:19:34] 2025-11-26 16:18:33,339 | INFO     | all payload control threads have been joined
[2025-11-26 17:19:34] 2025-11-26 16:18:33,352 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 17:19:34] 2025-11-26 16:18:33,571 | INFO     | all job control threads have been joined
[2025-11-26 17:19:34] 2025-11-26 16:18:33,632 | INFO     | all data control threads have been joined
[2025-11-26 17:19:34] 2025-11-26 16:18:34,301 | INFO     | [job] retrieve thread has finished
[2025-11-26 17:19:34] 2025-11-26 16:18:34,301 | INFO     | [job] job monitor thread has finished
[2025-11-26 17:19:34] 2025-11-26 16:18:34,301 | INFO     | [job] queue monitor thread has finished
[2025-11-26 17:19:34] 2025-11-26 16:18:34,345 | INFO     | [payload] control thread has finished
[2025-11-26 17:19:34] 2025-11-26 16:18:34,374 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 17:19:34] 2025-11-26 16:18:34,571 | INFO     | [payload] validate_post thread has finished
[2025-11-26 17:19:34] 2025-11-26 16:18:34,576 | INFO     | [job] control thread has finished
[2025-11-26 17:19:34] 2025-11-26 16:18:34,587 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 17:19:34] 2025-11-26 16:18:34,638 | INFO     | [data] control thread has finished
[2025-11-26 17:19:34] 2025-11-26 16:18:34,645 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 17:19:34] 2025-11-26 16:18:35,130 | INFO     | [data] copytool_in thread has finished
[2025-11-26 17:19:34] 2025-11-26 16:18:35,358 | INFO     | [data] copytool_out thread has finished
[2025-11-26 17:19:34] 2025-11-26 16:18:35,623 | INFO     | [payload] failed_post thread has finished
[2025-11-26 17:19:34] 2025-11-26 16:18:35,769 | INFO     | [job] validate thread has finished
[2025-11-26 17:19:34] 2025-11-26 16:18:37,302 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 17:19:34] 2025-11-26 16:18:43,480 | INFO     | job.realtimelogging is not enabled
[2025-11-26 17:19:34] 2025-11-26 16:18:44,485 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 17:19:34] 2025-11-26 16:19:03,261 | INFO     | PID=1521243 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 17:19:34] 2025-11-26 16:19:03,261 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 17:19:34] 2025-11-26 16:19:03,261 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 17:19:34] 2025-11-26 16:19:03,261 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 17:19:34] 2025-11-26 16:19:29,394 | INFO     | [monitor] cgroup control has ended
[2025-11-26 17:19:34] 2025-11-26 16:19:29,830 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140321986201408)>', '<ExcThread(monitor, started 140321631475456)>']
[2025-11-26 17:19:34] 2025-11-26 16:19:30,402 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 17:19:34] 2025-11-26 16:19:30,402 | INFO     | [monitor] control thread has ended
[2025-11-26 17:19:34] 2025-11-26 16:19:34,853 | INFO     | all workflow threads have been joined
[2025-11-26 17:19:34] 2025-11-26 16:19:34,853 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 17:19:34] 2025-11-26 16:19:34,853 | INFO     | traces error code: 0
[2025-11-26 17:19:34] 2025-11-26 16:19:34,853 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 17:19:34] 2025-11-26 16:19:34,906 [wrapper] ==== pilot stdout END ====
[2025-11-26 17:19:34] 2025-11-26 16:19:34,908 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 17:19:34] 2025-11-26 16:19:34,910 [wrapper] pilotpid: 1521243
[2025-11-26 17:19:34] 2025-11-26 16:19:34,913 [wrapper] Pilot exit status: 0
[2025-11-26 17:19:34] 2025-11-26 16:19:34,920 [wrapper] pandaids: 6895351565
[2025-11-26 17:19:34] 2025-11-26 16:19:34,936 [wrapper] cleanup supervisor_pilot 1577872 1521244
[2025-11-26 17:19:34] 2025-11-26 16:19:34,939 [wrapper] Test setup, not cleaning
[2025-11-26 17:19:34] 2025-11-26 16:19:34,941 [wrapper] apfmon messages muted
[2025-11-26 17:19:34] 2025-11-26 16:19:34,943 [wrapper] ==== wrapper stdout END ====
[2025-11-26 17:19:34] 2025-11-26 16:19:34,946 [wrapper] ==== wrapper stderr END ====
[2025-11-26 17:19:34]  *** Error codes and diagnostics ***
[2025-11-26 17:19:34]     "exeErrorCode": 0,
[2025-11-26 17:19:34]     "exeErrorDiag": "",
[2025-11-26 17:19:34]     "pilotErrorCode": 0,
[2025-11-26 17:19:34]     "pilotErrorDiag": "",
[2025-11-26 17:19:34]  *** Listing of results directory ***
[2025-11-26 17:19:34] total 1305736
[2025-11-26 17:19:34] -rw-r--r-- 1 boinc boinc    576529 Nov 23 01:28 pilot3.tar.gz
[2025-11-26 17:19:34] -rw-r--r-- 1 boinc boinc      5112 Nov 23 01:58 queuedata.json
[2025-11-26 17:19:34] -rwx------ 1 boinc boinc     36292 Nov 23 01:59 runpilot2-wrapper.sh
[2025-11-26 17:19:34] -rw-r--r-- 1 boinc boinc       100 Nov 26 09:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 17:19:34] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 09:23 run_atlas
[2025-11-26 17:19:34] -rw-r--r-- 1 boinc boinc       105 Nov 26 09:23 job.xml
[2025-11-26 17:19:34] -rw-r--r-- 2 boinc boinc 409242576 Nov 26 09:23 EVNT.47483658._000556.pool.root.1
[2025-11-26 17:19:34] drwxrwx--x 2 boinc boinc      4096 Nov 26 09:23 shared
[2025-11-26 17:19:34] -rw-r--r-- 2 boinc boinc    590101 Nov 26 09:23 input.tar.gz
[2025-11-26 17:19:34] -rw-r--r-- 2 boinc boinc     15847 Nov 26 09:23 start_atlas.sh
[2025-11-26 17:19:34] -rw-r--r-- 1 boinc boinc         0 Nov 26 09:23 boinc_setup_complete
[2025-11-26 17:19:34] -rw-r--r-- 1 boinc boinc      6442 Nov 26 09:23 init_data.xml
[2025-11-26 17:19:34] -rw-r--r-- 1 boinc boinc         0 Nov 26 09:23 boinc_lockfile
[2025-11-26 17:19:34] -rw-r--r-- 1 boinc boinc      2785 Nov 26 09:23 pandaJob.out
[2025-11-26 17:19:34] -rw------- 1 boinc boinc    991877 Nov 26 09:23 agis_schedconf.cvmfs.json
[2025-11-26 17:19:34] drwx------ 5 boinc boinc      4096 Nov 26 09:23 pilot3
[2025-11-26 17:19:34] -rw-r--r-- 1 boinc boinc       531 Nov 26 17:09 boinc_task_state.xml
[2025-11-26 17:19:34] -rw------- 1 boinc boinc 913583585 Nov 26 17:17 HITS.47556137._005520.pool.root.1
[2025-11-26 17:19:34] -rw------- 1 boinc boinc      1050 Nov 26 17:17 memory_monitor_summary.json
[2025-11-26 17:19:34] -rw------- 1 boinc boinc   1516240 Nov 26 17:17 agis_ddmendpoints.agis.ALL.json
[2025-11-26 17:19:34] -rw------- 1 boinc boinc   1161173 Nov 26 17:17 log.47556137._005520.job.log.tgz.1
[2025-11-26 17:19:34] -rw------- 1 boinc boinc        95 Nov 26 17:18 pilot_heartbeat.json
[2025-11-26 17:19:34] -rw------- 1 boinc boinc      8565 Nov 26 17:18 heartbeat.json
[2025-11-26 17:19:34] -rw-r--r-- 1 boinc boinc      8192 Nov 26 17:19 boinc_mmap_file
[2025-11-26 17:19:34] -rw-r--r-- 1 boinc boinc        28 Nov 26 17:19 wrapper_checkpoint.txt
[2025-11-26 17:19:34] -rw------- 1 boinc boinc      4824 Nov 26 17:19 pilotlog.txt
[2025-11-26 17:19:34] -rw------- 1 boinc boinc   4008560 Nov 26 17:19 log.47556137._005520.job.log.1
[2025-11-26 17:19:34] -rw------- 1 boinc boinc       353 Nov 26 17:19 output.list
[2025-11-26 17:19:34] -rw-r--r-- 1 boinc boinc       620 Nov 26 17:19 runtime_log
[2025-11-26 17:19:34] -rw------- 1 boinc boinc   5191680 Nov 26 17:19 result.tar.gz
[2025-11-26 17:19:34] -rw------- 1 boinc boinc       666 Nov 26 17:19 wUAODmUdDh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmhUKKDmx5ahln.diag
[2025-11-26 17:19:34] -rw-r--r-- 1 boinc boinc      8903 Nov 26 17:19 runtime_log.err
[2025-11-26 17:19:34] -rw-r--r-- 1 boinc boinc      8391 Nov 26 17:19 stderr.txt
[2025-11-26 17:19:34] HITS file was successfully produced:
[2025-11-26 17:19:34] -rw------- 1 boinc boinc 913583585 Nov 26 17:17 shared/HITS.pool.root.1
[2025-11-26 17:19:34]  *** Contents of shared directory: ***
[2025-11-26 17:19:35] total 1297500
[2025-11-26 17:19:35] -rw-r--r-- 2 boinc boinc 409242576 Nov 26 09:23 ATLAS.root_0
[2025-11-26 17:19:35] -rw-r--r-- 2 boinc boinc    590101 Nov 26 09:23 input.tar.gz
[2025-11-26 17:19:35] -rw-r--r-- 2 boinc boinc     15847 Nov 26 09:23 start_atlas.sh
[2025-11-26 17:19:35] -rw------- 1 boinc boinc 913583585 Nov 26 17:17 HITS.pool.root.1
[2025-11-26 17:19:35] -rw------- 1 boinc boinc   5191680 Nov 26 17:19 result.tar.gz
17:19:36 (1517514): run_atlas exited; CPU time 82983.622770
17:19:36 (1517514): called boinc_finish(0)

</stderr_txt>
]]>

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