Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:37 (304289): wrapper (7.7.26015): starting
00:04:37 (304289): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 00:04:37] Arguments: --nthreads 8
[2025-11-24 00:04:37] Threads: 8
[2025-11-24 00:04:37] Checking for CVMFS
[2025-11-24 00:04:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:04:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:04:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:04:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:04:38] 2.13.2.0 6468 30441 453688 153233 2 425 30499106 40960000 16197 16776704 0 105219090 99.615 105053452 38300 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 00:04:38] CVMFS is ok
[2025-11-24 00:04:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:04:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:04:38] Further information can be found at the LHC@home message board.
[2025-11-24 00:04:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:04:38] Checking for apptainer binary...
[2025-11-24 00:04:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:04:38] Running /usr/bin/apptainer --version
[2025-11-24 00:04:38] apptainer version 1.4.4-1.el9
[2025-11-24 00:04:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:04:38] c-206-41.aglt2.org
[2025-11-24 00:04:38] apptainer works
[2025-11-24 00:04:38] Set ATHENA_PROC_NUMBER=8
[2025-11-24 00:04:38] Set ATHENA_CORE_NUMBER=8
[2025-11-24 00:04:38] Starting ATLAS job with PandaID=6895351480
[2025-11-24 00:04:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:30:59 (430347): wrapper (7.7.26015): starting
00:30:59 (430347): wrapper: running run_atlas (--nthreads 10)
[2025-11-24 00:30:59] Arguments: --nthreads 10
[2025-11-24 00:30:59] Threads: 10
[2025-11-24 00:30:59] This job has been restarted, cleaning up previous attempt
[2025-11-24 00:30:59] Checking for CVMFS
[2025-11-24 00:30:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:30:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:30:59] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:30:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:30:59] 2.13.2.0 6468 30468 443352 153235 0 184 30849104 40960000 12580 16776704 0 105470758 99.615 105179683 38302 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 00:30:59] CVMFS is ok
[2025-11-24 00:30:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:30:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:30:59] Further information can be found at the LHC@home message board.
[2025-11-24 00:30:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:30:59] Checking for apptainer binary...
[2025-11-24 00:30:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:30:59] Running /usr/bin/apptainer --version
[2025-11-24 00:30:59] apptainer version 1.4.4-1.el9
[2025-11-24 00:30:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:30:59] c-206-41.aglt2.org
[2025-11-24 00:30:59] apptainer works
[2025-11-24 00:30:59] Set ATHENA_PROC_NUMBER=10
[2025-11-24 00:30:59] Set ATHENA_CORE_NUMBER=10
[2025-11-24 00:31:00] Starting ATLAS job with PandaID=6895351480
[2025-11-24 00:31:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:20:06 (430347): BOINC client no longer exists - exiting
00:20:06 (430347): timer handler: client dead, exiting
00:31:09 (3811358): wrapper (7.7.26015): starting
00:31:09 (3811358): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 00:31:09] Arguments: --nthreads 8
[2025-11-25 00:31:09] Threads: 8
[2025-11-25 00:31:09] This job has been restarted, cleaning up previous attempt
[2025-11-25 00:31:09] Checking for CVMFS
[2025-11-25 00:31:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:31:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:31:10] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:31:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:31:10] 2.13.2.0 6468 31908 446864 153272 3 273 30701567 40960001 16761 16776704 0 110730529 99.613 110301937 38154 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 00:31:10] CVMFS is ok
[2025-11-25 00:31:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:31:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:31:10] Further information can be found at the LHC@home message board.
[2025-11-25 00:31:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:31:10] Checking for apptainer binary...
[2025-11-25 00:31:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:31:10] Running /usr/bin/apptainer --version
[2025-11-25 00:31:10] apptainer version 1.4.4-1.el9
[2025-11-25 00:31:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:31:11] c-206-41.aglt2.org
[2025-11-25 00:31:11] apptainer works
[2025-11-25 00:31:11] Set ATHENA_PROC_NUMBER=8
[2025-11-25 00:31:11] Set ATHENA_CORE_NUMBER=8
[2025-11-25 00:31:11] Starting ATLAS job with PandaID=6895351480
[2025-11-25 00:31:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 17:38:56]  *** The last 200 lines of the pilot log: ***
[2025-11-26 17:38:56] 2025-11-26 22:37:25,766 | INFO     | time since job start (147939s) is within the limit (172800.0s)
[2025-11-26 17:38:56] 2025-11-26 22:37:27,019 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 17:38:56] 2025-11-26 22:37:27,027 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3195.6777968750002
[2025-11-26 17:38:56] 2025-11-26 22:37:27,038 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6895351480/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 17:38:56] 2025-11-26 22:37:27,038 | INFO     | extracted standard info from prmon json
[2025-11-26 17:38:56] 2025-11-26 22:37:27,038 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 17:38:56] 2025-11-26 22:37:27,038 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 17:38:56] 2025-11-26 22:37:27,072 | INFO     | fitting pss+swap vs Time
[2025-11-26 17:38:56] 2025-11-26 22:37:27,074 | INFO     | sum of square deviations: 4416327875886.799
[2025-11-26 17:38:56] 2025-11-26 22:37:27,178 | INFO     | sum of deviations: 16926060942676.156
[2025-11-26 17:38:56] 2025-11-26 22:37:27,178 | INFO     | mean x: 1764122700.9636965
[2025-11-26 17:38:56] 2025-11-26 22:37:27,178 | INFO     | mean y: 2900891.922029703
[2025-11-26 17:38:56] 2025-11-26 22:37:27,180 | INFO     | intersect: -6758292838.71197
[2025-11-26 17:38:56] 2025-11-26 22:37:27,182 | INFO     | chi2: 5.855666230318424
[2025-11-26 17:38:56] 2025-11-26 22:37:27,188 | INFO     | sum of square deviations: 4389057069426.702
[2025-11-26 17:38:56] 2025-11-26 22:37:27,361 | INFO     | sum of deviations: 17568127813555.518
[2025-11-26 17:38:56] 2025-11-26 22:37:27,361 | INFO     | mean x: 1764122548.4708557
[2025-11-26 17:38:56] 2025-11-26 22:37:27,361 | INFO     | mean y: 2904481.2128978916
[2025-11-26 17:38:56] 2025-11-26 22:37:27,361 | INFO     | intersect: -7058368571.306214
[2025-11-26 17:38:56] 2025-11-26 22:37:27,363 | INFO     | chi2: 3.635301405326933
[2025-11-26 17:38:56] 2025-11-26 22:37:27,363 | INFO     | current chi2=3.635301405326933 (change=37.91822719497369 %)
[2025-11-26 17:38:56] 2025-11-26 22:37:27,365 | INFO     | sum of square deviations: 4361898186855.662
[2025-11-26 17:38:56] 2025-11-26 22:37:27,467 | INFO     | sum of deviations: 17583895964003.56
[2025-11-26 17:38:56] 2025-11-26 22:37:27,467 | INFO     | mean x: 1764122395.9763877
[2025-11-26 17:38:56] 2025-11-26 22:37:27,467 | INFO     | mean y: 2904568.958160729
[2025-11-26 17:38:56] 2025-11-26 22:37:27,467 | INFO     | intersect: -7108711372.031701
[2025-11-26 17:38:56] 2025-11-26 22:37:27,469 | INFO     | chi2: 3.507629424319865
[2025-11-26 17:38:56] 2025-11-26 22:37:27,469 | INFO     | current chi2=3.507629424319865 (change=3.5120053820017705 %)
[2025-11-26 17:38:56] 2025-11-26 22:37:27,469 | INFO     | right removable region: 2413
[2025-11-26 17:38:56] 2025-11-26 22:37:27,472 | INFO     | sum of square deviations: 4389052390738.523
[2025-11-26 17:38:56] 2025-11-26 22:37:27,581 | INFO     | sum of deviations: 16130457271974.55
[2025-11-26 17:38:56] 2025-11-26 22:37:27,581 | INFO     | mean x: 1764122853.4696155
[2025-11-26 17:38:56] 2025-11-26 22:37:27,581 | INFO     | mean y: 2905339.334022323
[2025-11-26 17:38:56] 2025-11-26 22:37:27,581 | INFO     | intersect: -6480523377.637226
[2025-11-26 17:38:56] 2025-11-26 22:37:27,583 | INFO     | chi2: 3.1613888624905084
[2025-11-26 17:38:56] 2025-11-26 22:37:27,583 | INFO     | current chi2=3.1613888624905084 (change=46.01145731083454 %)
[2025-11-26 17:38:56] 2025-11-26 22:37:27,585 | INFO     | sum of square deviations: 4361890894709.0293
[2025-11-26 17:38:56] 2025-11-26 22:37:27,680 | INFO     | sum of deviations: 15889848054659.818
[2025-11-26 17:38:56] 2025-11-26 22:37:27,680 | INFO     | mean x: 1764123005.9714167
[2025-11-26 17:38:56] 2025-11-26 22:37:27,681 | INFO     | mean y: 2906690.2149958573
[2025-11-26 17:38:56] 2025-11-26 22:37:27,681 | INFO     | intersect: -6423582919.742447
[2025-11-26 17:38:56] 2025-11-26 22:37:27,682 | INFO     | chi2: 3.0604827622562136
[2025-11-26 17:38:56] 2025-11-26 22:37:27,683 | INFO     | current chi2=3.0604827622562136 (change=3.191828168674007 %)
[2025-11-26 17:38:56] 2025-11-26 22:37:27,683 | INFO     | left removable region: 20
[2025-11-26 17:38:56] 2025-11-26 22:37:27,685 | INFO     | sum of square deviations: 4249043179547.807
[2025-11-26 17:38:56] 2025-11-26 22:37:27,776 | INFO     | time since job start (147941s) is within the limit (172800.0s)
[2025-11-26 17:38:56] 2025-11-26 22:37:27,780 | INFO     | sum of deviations: 16102649955104.316
[2025-11-26 17:38:56] 2025-11-26 22:37:27,780 | INFO     | mean x: 1764122975.4864187
[2025-11-26 17:38:56] 2025-11-26 22:37:27,780 | INFO     | mean y: 2912764.948182198
[2025-11-26 17:38:56] 2025-11-26 22:37:27,780 | INFO     | intersect: -6682605256.791013
[2025-11-26 17:38:56] 2025-11-26 22:37:27,782 | INFO     | chi2: 0.5718990547583979
[2025-11-26 17:38:56] 2025-11-26 22:37:27,782 | INFO     | current memory leak: 3.79 B/s (using 2393 data points, chi2=0.57)
[2025-11-26 17:38:56] 2025-11-26 22:37:27,784 | INFO     | could have reported an average CPU frequency of 3217 MHz (84 samples)
[2025-11-26 17:38:56] 2025-11-26 22:37:27,784 | INFO     | ..............................
[2025-11-26 17:38:56] 2025-11-26 22:37:27,784 | INFO     | . Timing measurements:
[2025-11-26 17:38:56] 2025-11-26 22:37:27,784 | INFO     | . get job = 0 s
[2025-11-26 17:38:56] 2025-11-26 22:37:27,784 | INFO     | . initial setup = 1 s
[2025-11-26 17:38:56] 2025-11-26 22:37:27,784 | INFO     | . payload setup = 27 s
[2025-11-26 17:38:56] 2025-11-26 22:37:27,784 | INFO     | . stage-in = 0 s
[2025-11-26 17:38:56] 2025-11-26 22:37:27,784 | INFO     | . payload execution = 147852 s
[2025-11-26 17:38:56] 2025-11-26 22:37:27,784 | INFO     | . stage-out = 3 s
[2025-11-26 17:38:56] 2025-11-26 22:37:27,784 | INFO     | . log creation = 1 s
[2025-11-26 17:38:56] 2025-11-26 22:37:27,785 | INFO     | ..............................
[2025-11-26 17:38:56] 2025-11-26 22:37:27,922 | INFO     | 
[2025-11-26 17:38:56] 2025-11-26 22:37:27,922 | INFO     | job summary report
[2025-11-26 17:38:56] 2025-11-26 22:37:27,922 | INFO     | --------------------------------------------------
[2025-11-26 17:38:56] 2025-11-26 22:37:27,922 | INFO     | PanDA job id: 6895351480
[2025-11-26 17:38:56] 2025-11-26 22:37:27,922 | INFO     | task id: 47556137
[2025-11-26 17:38:56] 2025-11-26 22:37:27,922 | INFO     | errors: (none)
[2025-11-26 17:38:56] 2025-11-26 22:37:27,922 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 17:38:56] 2025-11-26 22:37:27,922 | INFO     | pilot state: finished 
[2025-11-26 17:38:56] 2025-11-26 22:37:27,922 | INFO     | transexitcode: 0
[2025-11-26 17:38:56] 2025-11-26 22:37:27,923 | INFO     | exeerrorcode: 0
[2025-11-26 17:38:56] 2025-11-26 22:37:27,923 | INFO     | exeerrordiag: 
[2025-11-26 17:38:56] 2025-11-26 22:37:27,923 | INFO     | exitcode: 0
[2025-11-26 17:38:56] 2025-11-26 22:37:27,923 | INFO     | exitmsg: OK
[2025-11-26 17:38:56] 2025-11-26 22:37:27,923 | INFO     | cpuconsumptiontime: 208289 s
[2025-11-26 17:38:56] 2025-11-26 22:37:27,923 | INFO     | nevents: 1000
[2025-11-26 17:38:56] 2025-11-26 22:37:27,923 | INFO     | neventsw: 0
[2025-11-26 17:38:56] 2025-11-26 22:37:27,923 | INFO     | pid: 3890839
[2025-11-26 17:38:56] 2025-11-26 22:37:27,923 | INFO     | pgrp: 3890839
[2025-11-26 17:38:56] 2025-11-26 22:37:27,923 | INFO     | corecount: 8
[2025-11-26 17:38:56] 2025-11-26 22:37:27,923 | INFO     | event service: False
[2025-11-26 17:38:56] 2025-11-26 22:37:27,923 | INFO     | sizes: {0: 2284087, 1: 2284286, 2: 2284286, 12: 2284314, 22: 2284604, 23: 2284632, 147884: 2376439, 147888: 2385438, 147889: 2385494, 147898: 2385740}
[2025-11-26 17:38:56] 2025-11-26 22:37:27,925 | INFO     | --------------------------------------------------
[2025-11-26 17:38:56] 2025-11-26 22:37:27,925 | INFO     | 
[2025-11-26 17:38:56] 2025-11-26 22:37:27,925 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-26 17:38:56] 2025-11-26 22:37:27,944 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 17:38:56] 2025-11-26 22:37:27,945 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 17:38:56] 2025-11-26 22:37:27,945 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 17:38:56] 2025-11-26 22:37:27,945 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 17:38:56] 2025-11-26 22:37:27,945 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 17:38:56] 2025-11-26 22:37:27,945 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 17:38:56] 2025-11-26 22:37:27,945 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 17:38:56] 2025-11-26 22:37:27,945 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 17:38:56] 2025-11-26 22:37:27,945 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 17:38:56] 2025-11-26 22:37:27,945 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 17:38:56] 2025-11-26 22:37:27,945 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 17:38:56] 2025-11-26 22:37:27,945 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 17:38:56] 2025-11-26 22:37:27,945 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 17:38:56] 2025-11-26 22:37:27,945 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 17:38:56] 2025-11-26 22:37:27,945 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 17:38:56] 2025-11-26 22:37:27,945 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 17:38:56] 2025-11-26 22:37:27,945 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 17:38:56] 2025-11-26 22:37:27,945 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 17:38:56] 2025-11-26 22:37:27,946 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 17:38:56] 2025-11-26 22:37:27,946 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 17:38:56] 2025-11-26 22:37:27,946 | INFO     | job 6895351480 has completed (purged errors)
[2025-11-26 17:38:56] 2025-11-26 22:37:27,946 | INFO     | overall cleanup function is called
[2025-11-26 17:38:56] 2025-11-26 22:37:28,964 | INFO     | --- collectZombieJob: --- 10, [3890839]
[2025-11-26 17:38:56] 2025-11-26 22:37:28,964 | INFO     | zombie collector waiting for pid 3890839
[2025-11-26 17:38:56] 2025-11-26 22:37:28,964 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 17:38:56] 2025-11-26 22:37:28,964 | INFO     | collected zombie processes
[2025-11-26 17:38:56] 2025-11-26 22:37:28,965 | INFO     | will attempt to kill all subprocesses of pid=3890839
[2025-11-26 17:38:56] 2025-11-26 22:37:29,283 | INFO     | process IDs to be killed: [3890839] (in reverse order)
[2025-11-26 17:38:56] 2025-11-26 22:37:29,397 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 17:38:56] 2025-11-26 22:37:29,397 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 17:38:56] 2025-11-26 22:37:29,411 | INFO     | did not find any defunct processes belonging to 3890839
[2025-11-26 17:38:56] 2025-11-26 22:37:29,422 | INFO     | did not find any defunct processes belonging to 3890839
[2025-11-26 17:38:56] 2025-11-26 22:37:29,423 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 17:38:56] 2025-11-26 22:37:29,423 | INFO     | ready for new job
[2025-11-26 17:38:56] 2025-11-26 22:37:29,423 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 17:38:56] 2025-11-26 22:37:29,434 | INFO     | ***************************************
[2025-11-26 17:38:56] 2025-11-26 22:37:29,434 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 17:38:56] 2025-11-26 22:37:29,434 | INFO     | ***************************************
[2025-11-26 17:38:56] 2025-11-26 22:37:29,434 | INFO     | 
[2025-11-26 17:38:56] 2025-11-26 22:37:29,438 | INFO     | architecture information:
[2025-11-26 17:38:56] 2025-11-26 22:37:29,438 | INFO     | executing command: cat /etc/os-release
[2025-11-26 17:38:56] 2025-11-26 22:37:29,460 | INFO     | cat /etc/os-release:
[2025-11-26 17:38:56] NAME="CentOS Linux"
[2025-11-26 17:38:56] VERSION="7 (Core)"
[2025-11-26 17:38:56] ID="centos"
[2025-11-26 17:38:56] ID_LIKE="rhel fedora"
[2025-11-26 17:38:56] VERSION_ID="7"
[2025-11-26 17:38:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 17:38:56] ANSI_COLOR="0;31"
[2025-11-26 17:38:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 17:38:56] HOME_URL="https://www.centos.org/"
[2025-11-26 17:38:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 17:38:56] 
[2025-11-26 17:38:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 17:38:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 17:38:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 17:38:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 17:38:56] 
[2025-11-26 17:38:56] 2025-11-26 22:37:29,460 | INFO     | ***************************************
[2025-11-26 17:38:56] 2025-11-26 22:37:29,964 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-26 17:38:56] 2025-11-26 22:37:30,031 | INFO     | sufficient remaining disk space (77510737920 B)
[2025-11-26 17:38:56] 2025-11-26 22:37:30,031 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 17:38:56] 2025-11-26 22:37:30,032 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 17:38:56] 2025-11-26 22:37:30,032 | INFO     | update_server=False
[2025-11-26 17:38:56] 2025-11-26 22:37:30,032 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 17:38:56] 2025-11-26 22:37:30,032 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 17:38:56] 2025-11-26 22:37:30,033 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:38:56] 2025-11-26 22:37:30,033 | INFO     | aborting loop
[2025-11-26 17:38:56] 2025-11-26 22:37:30,350 | INFO     | all payload control threads have been joined
[2025-11-26 17:38:56] 2025-11-26 22:37:30,826 | INFO     | all job control threads have been joined
[2025-11-26 17:38:56] 2025-11-26 22:37:30,997 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 17:38:56] 2025-11-26 22:37:31,038 | INFO     | [job] retrieve thread has finished
[2025-11-26 17:38:56] 2025-11-26 22:37:31,039 | INFO     | [job] job monitor thread has finished
[2025-11-26 17:38:56] 2025-11-26 22:37:31,050 | INFO     | all data control threads have been joined
[2025-11-26 17:38:56] 2025-11-26 22:37:31,128 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 17:38:56] 2025-11-26 22:37:31,355 | INFO     | [payload] control thread has finished
[2025-11-26 17:38:56] 2025-11-26 22:37:31,561 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 17:38:56] 2025-11-26 22:37:31,769 | INFO     | [data] copytool_in thread has finished
[2025-11-26 17:38:56] 2025-11-26 22:37:31,834 | INFO     | [job] control thread has finished
[2025-11-26 17:38:56] 2025-11-26 22:37:32,056 | INFO     | [data] control thread has finished
[2025-11-26 17:38:56] 2025-11-26 22:37:32,284 | INFO     | [payload] validate_post thread has finished
[2025-11-26 17:38:56] 2025-11-26 22:37:32,284 | INFO     | [payload] failed_post thread has finished
[2025-11-26 17:38:56] 2025-11-26 22:37:32,305 | INFO     | [job] validate thread has finished
[2025-11-26 17:38:56] 2025-11-26 22:37:32,319 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 17:38:56] 2025-11-26 22:37:32,936 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:38:56] 2025-11-26 22:37:33,003 | INFO     | [data] copytool_out thread has finished
[2025-11-26 17:38:56] 2025-11-26 22:37:33,941 | INFO     | [job] queue monitor thread has finished
[2025-11-26 17:38:56] 2025-11-26 22:37:34,039 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 17:38:56] 2025-11-26 22:37:40,316 | INFO     | job.realtimelogging is not enabled
[2025-11-26 17:38:56] 2025-11-26 22:37:41,322 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 17:38:56] 2025-11-26 22:38:01,183 | INFO     | PID=3839595 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 17:38:56] 2025-11-26 22:38:01,183 | INFO     | .. there are 19 such processes running
[2025-11-26 17:38:56] 2025-11-26 22:38:01,184 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 17:38:56] 2025-11-26 22:38:01,184 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 17:38:56] 2025-11-26 22:38:01,184 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 17:38:56] 2025-11-26 22:38:29,047 | INFO     | [monitor] cgroup control has ended
[2025-11-26 17:38:56] 2025-11-26 22:38:30,174 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140411061958464)>', '<ExcThread(monitor, started 140410584291072)>']
[2025-11-26 17:38:56] 2025-11-26 22:38:30,383 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 17:38:56] 2025-11-26 22:38:30,383 | INFO     | [monitor] control thread has ended
[2025-11-26 17:38:56] 2025-11-26 22:38:35,200 | INFO     | all workflow threads have been joined
[2025-11-26 17:38:56] 2025-11-26 22:38:35,200 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 17:38:56] 2025-11-26 22:38:35,201 | INFO     | traces error code: 0
[2025-11-26 17:38:56] 2025-11-26 22:38:35,201 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 17:38:56] 2025-11-26 22:38:35,386 [wrapper] ==== pilot stdout END ====
[2025-11-26 17:38:56] 2025-11-26 22:38:35,424 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 17:38:56] 2025-11-26 22:38:35,462 [wrapper] pilotpid: 3839595
[2025-11-26 17:38:56] 2025-11-26 22:38:35,473 [wrapper] Pilot exit status: 0
[2025-11-26 17:38:56] 2025-11-26 22:38:35,509 [wrapper] pandaids: 6895351480 6895351480 6895351480
[2025-11-26 17:38:56] 2025-11-26 22:38:35,582 [wrapper] cleanup supervisor_pilot 2443415 3839596
[2025-11-26 17:38:56] 2025-11-26 22:38:35,602 [wrapper] Test setup, not cleaning
[2025-11-26 17:38:56] 2025-11-26 22:38:35,632 [wrapper] apfmon messages muted
[2025-11-26 17:38:56] 2025-11-26 22:38:35,640 [wrapper] ==== wrapper stdout END ====
[2025-11-26 17:38:56] 2025-11-26 22:38:35,679 [wrapper] ==== wrapper stderr END ====
[2025-11-26 17:38:56]  *** Error codes and diagnostics ***
[2025-11-26 17:38:56]     "exeErrorCode": 0,
[2025-11-26 17:38:56]     "exeErrorDiag": "",
[2025-11-26 17:38:56]     "pilotErrorCode": 0,
[2025-11-26 17:38:56]     "pilotErrorDiag": "",
[2025-11-26 17:38:56]  *** Listing of results directory ***
[2025-11-26 17:38:56] total 1731308
[2025-11-26 17:38:56] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-26 17:38:56] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 19:28 pilot3.tar.gz
[2025-11-26 17:38:56] -rwx------. 1 boincer umatlas     36292 Nov 22 19:37 runpilot2-wrapper.sh
[2025-11-26 17:38:56] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 19:37 queuedata.json
[2025-11-26 17:38:56] -rw-r--r--. 1 boincer umatlas       100 Nov 24 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 17:38:56] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 00:04 run_atlas
[2025-11-26 17:38:56] -rw-r--r--. 1 boincer umatlas       105 Nov 24 00:04 job.xml
[2025-11-26 17:38:56] -rw-r--r--. 3 boincer umatlas 409080231 Nov 24 00:04 EVNT.47483658._000551.pool.root.1
[2025-11-26 17:38:56] -rw-r--r--. 3 boincer umatlas 409080231 Nov 24 00:04 ATLAS.root_0
[2025-11-26 17:38:56] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:04 start_atlas.sh
[2025-11-26 17:38:56] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 00:04 shared
[2025-11-26 17:38:56] -rw-r--r--. 2 boincer umatlas    590095 Nov 24 00:04 input.tar.gz
[2025-11-26 17:38:56] -rw-r--r--. 1 boincer umatlas         0 Nov 24 00:04 boinc_lockfile
[2025-11-26 17:38:56] -rw-r--r--. 1 boincer umatlas      2784 Nov 25 00:31 pandaJob.out
[2025-11-26 17:38:56] -rw-------. 1 boincer umatlas        57 Nov 25 00:31 setup.sh.local
[2025-11-26 17:38:56] -rw-------. 1 boincer umatlas    991801 Nov 25 00:31 agis_schedconf.cvmfs.json
[2025-11-26 17:38:56] -rw-r--r--. 1 boincer umatlas       533 Nov 26 17:29 boinc_task_state.xml
[2025-11-26 17:38:56] -rw-r--r--. 1 boincer umatlas      6903 Nov 26 17:31 init_data.xml
[2025-11-26 17:38:56] -rw-------. 1 boincer umatlas 908915774 Nov 26 17:36 HITS.47556137._005467.pool.root.1
[2025-11-26 17:38:56] -rw-------. 1 boincer umatlas      1069 Nov 26 17:37 memory_monitor_summary.json
[2025-11-26 17:38:56] -rw-------. 1 boincer umatlas   1516240 Nov 26 17:37 agis_ddmendpoints.agis.ALL.json
[2025-11-26 17:38:56] -rw-------. 1 boincer umatlas   3105257 Nov 26 17:37 log.47556137._005467.job.log.tgz.1
[2025-11-26 17:38:56] -rw-------. 1 boincer umatlas      8618 Nov 26 17:37 heartbeat.json
[2025-11-26 17:38:56] -rw-------. 1 boincer umatlas        96 Nov 26 17:38 pilot_heartbeat.json
[2025-11-26 17:38:56] -rw-------. 1 boincer umatlas      4896 Nov 26 17:38 pilotlog.txt
[2025-11-26 17:38:56] -rw-------. 1 boincer umatlas  17814733 Nov 26 17:38 log.47556137._005467.job.log.1
[2025-11-26 17:38:56] -rw-------. 1 boincer umatlas       353 Nov 26 17:38 output.list
[2025-11-26 17:38:56] -rw-r--r--. 1 boincer umatlas       620 Nov 26 17:38 runtime_log
[2025-11-26 17:38:56] -rw-------. 1 boincer umatlas  20940800 Nov 26 17:38 result.tar.gz
[2025-11-26 17:38:56] -rw-r--r--. 1 boincer umatlas      9429 Nov 26 17:38 runtime_log.err
[2025-11-26 17:38:56] -rw-------. 1 boincer umatlas       918 Nov 26 17:38 pBzKDm4HDh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxTKKDme3dTjn.diag
[2025-11-26 17:38:56] -rw-r--r--. 1 boincer umatlas        29 Nov 26 17:38 wrapper_checkpoint.txt
[2025-11-26 17:38:56] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 17:38 boinc_mmap_file
[2025-11-26 17:38:56] -rw-r--r--. 1 boincer umatlas     25778 Nov 26 17:38 stderr.txt
[2025-11-26 17:38:56] HITS file was successfully produced:
[2025-11-26 17:38:56] -rw-------. 1 boincer umatlas 908915774 Nov 26 17:36 shared/HITS.pool.root.1
[2025-11-26 17:38:56]  *** Contents of shared directory: ***
[2025-11-26 17:38:56] total 1308168
[2025-11-26 17:38:56] -rw-r--r--. 3 boincer umatlas 409080231 Nov 24 00:04 ATLAS.root_0
[2025-11-26 17:38:56] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:04 start_atlas.sh
[2025-11-26 17:38:56] -rw-r--r--. 2 boincer umatlas    590095 Nov 24 00:04 input.tar.gz
[2025-11-26 17:38:56] -rw-------. 1 boincer umatlas 908915774 Nov 26 17:36 HITS.pool.root.1
[2025-11-26 17:38:56] -rw-------. 1 boincer umatlas  20940800 Nov 26 17:38 result.tar.gz
17:38:58 (3811358): run_atlas exited; CPU time 208955.929268
17:38:58 (3811358): called boinc_finish(0)

</stderr_txt>
]]>

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