Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
01:42:32 (501216): wrapper (7.7.26015): starting
01:42:32 (501216): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 01:42:32] Arguments: --nthreads 12
[2025-11-24 01:42:32] Threads: 12
[2025-11-24 01:42:32] Checking for CVMFS
[2025-11-24 01:42:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 01:42:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 01:42:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 01:42:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 01:42:33] 2.13.0.0 371123 717 72524 153227 3 81 4116918 6144001 0 130560 0 438320 99.983 29234 1669 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-24 01:42:33] CVMFS is ok
[2025-11-24 01:42:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 01:42:33] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-24 01:42:33] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-24 01:42:33] Further information can be found at the LHC@home message board.
[2025-11-24 01:42:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 01:42:33] Checking for apptainer binary...
[2025-11-24 01:42:33] apptainer is not installed, using version from CVMFS
[2025-11-24 01:42:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 01:42:33] Debian-bookworm-latest-amd64-base
[2025-11-24 01:42:33] apptainer works
[2025-11-24 01:42:33] Set ATHENA_PROC_NUMBER=12
[2025-11-24 01:42:33] Set ATHENA_CORE_NUMBER=12
[2025-11-24 01:42:33] Starting ATLAS job with PandaID=6895338671
[2025-11-24 01:42:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 05:49:08]  *** The last 200 lines of the pilot log: ***
[2025-11-24 05:49:08] 2025-11-24 04:48:09,307 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 05:49:08] 2025-11-24 04:48:09,308 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3805.2408750000004
[2025-11-24 05:49:08] 2025-11-24 04:48:09,310 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6895338671/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 05:49:08] 2025-11-24 04:48:09,310 | INFO     | extracted standard info from prmon json
[2025-11-24 05:49:08] 2025-11-24 04:48:09,310 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 05:49:08] 2025-11-24 04:48:09,310 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 05:49:08] 2025-11-24 04:48:09,312 | INFO     | fitting pss+swap vs Time
[2025-11-24 05:49:08] 2025-11-24 04:48:09,312 | INFO     | sum of square deviations: 4394483883.161177
[2025-11-24 05:49:08] 2025-11-24 04:48:09,313 | INFO     | sum of deviations: 161945113312.10733
[2025-11-24 05:49:08] 2025-11-24 04:48:09,313 | INFO     | mean x: 1763952327.5743802
[2025-11-24 05:49:08] 2025-11-24 04:48:09,313 | INFO     | mean y: 3602177.0495867766
[2025-11-24 05:49:08] 2025-11-24 04:48:09,313 | INFO     | intersect: -65001405728.61057
[2025-11-24 05:49:08] 2025-11-24 04:48:09,313 | INFO     | chi2: 4.417528827154684
[2025-11-24 05:49:08] 2025-11-24 04:48:09,313 | INFO     | sum of square deviations: 4127684370.632908
[2025-11-24 05:49:08] 2025-11-24 04:48:09,314 | INFO     | sum of deviations: 240212005451.6963
[2025-11-24 05:49:08] 2025-11-24 04:48:09,314 | INFO     | mean x: 1763952175.0759494
[2025-11-24 05:49:08] 2025-11-24 04:48:09,314 | INFO     | mean y: 3646637.3502109703
[2025-11-24 05:49:08] 2025-11-24 04:48:09,314 | INFO     | intersect: -102650154246.87416
[2025-11-24 05:49:08] 2025-11-24 04:48:09,314 | INFO     | chi2: 1.8535476187754687
[2025-11-24 05:49:08] 2025-11-24 04:48:09,314 | INFO     | current chi2=1.8535476187754687 (change=58.041074743380165 %)
[2025-11-24 05:49:08] 2025-11-24 04:48:09,314 | INFO     | sum of square deviations: 3871908320.6034436
[2025-11-24 05:49:08] 2025-11-24 04:48:09,315 | INFO     | sum of deviations: 229532407638.6034
[2025-11-24 05:49:08] 2025-11-24 04:48:09,315 | INFO     | mean x: 1763952022.5775862
[2025-11-24 05:49:08] 2025-11-24 04:48:09,315 | INFO     | mean y: 3640269.577586207
[2025-11-24 05:49:08] 2025-11-24 04:48:09,315 | INFO     | intersect: -104566024395.96272
[2025-11-24 05:49:08] 2025-11-24 04:48:09,315 | INFO     | chi2: 1.8528840892722331
[2025-11-24 05:49:08] 2025-11-24 04:48:09,315 | INFO     | current chi2=1.8528840892722331 (change=0.03579781261157541 %)
[2025-11-24 05:49:08] 2025-11-24 04:48:09,315 | INFO     | right removable region: 231
[2025-11-24 05:49:08] 2025-11-24 04:48:09,316 | INFO     | sum of square deviations: 4127673390.632908
[2025-11-24 05:49:08] 2025-11-24 04:48:09,316 | INFO     | sum of deviations: 91438767109.62036
[2025-11-24 05:49:08] 2025-11-24 04:48:09,316 | INFO     | mean x: 1763952480.0759494
[2025-11-24 05:49:08] 2025-11-24 04:48:09,316 | INFO     | mean y: 3642206.6877637133
[2025-11-24 05:49:08] 2025-11-24 04:48:09,316 | INFO     | intersect: -39072521228.17411
[2025-11-24 05:49:08] 2025-11-24 04:48:09,316 | INFO     | chi2: 2.6486593014631676
[2025-11-24 05:49:08] 2025-11-24 04:48:09,317 | INFO     | current chi2=2.6486593014631676 (change=40.04205959717165 %)
[2025-11-24 05:49:08] 2025-11-24 04:48:09,317 | INFO     | sum of square deviations: 3871886360.6034436
[2025-11-24 05:49:08] 2025-11-24 04:48:09,317 | INFO     | sum of deviations: 77701468403.37933
[2025-11-24 05:49:08] 2025-11-24 04:48:09,317 | INFO     | mean x: 1763952632.5775862
[2025-11-24 05:49:08] 2025-11-24 04:48:09,317 | INFO     | mean y: 3650384.5344827585
[2025-11-24 05:49:08] 2025-11-24 04:48:09,317 | INFO     | intersect: -35395557386.61603
[2025-11-24 05:49:08] 2025-11-24 04:48:09,318 | INFO     | chi2: 2.6393811933545424
[2025-11-24 05:49:08] 2025-11-24 04:48:09,318 | INFO     | current chi2=2.6393811933545424 (change=0.3502945095090141 %)
[2025-11-24 05:49:08] 2025-11-24 04:48:09,318 | INFO     | left removable region: 20
[2025-11-24 05:49:08] 2025-11-24 04:48:09,318 | INFO     | sum of square deviations: 2912787255.0710926
[2025-11-24 05:49:08] 2025-11-24 04:48:09,318 | INFO     | sum of deviations: 124951140917.73932
[2025-11-24 05:49:08] 2025-11-24 04:48:09,318 | INFO     | mean x: 1763952602.0663507
[2025-11-24 05:49:08] 2025-11-24 04:48:09,318 | INFO     | mean y: 3704767.0900473935
[2025-11-24 05:49:08] 2025-11-24 04:48:09,318 | INFO     | intersect: -75665360925.66891
[2025-11-24 05:49:08] 2025-11-24 04:48:09,319 | INFO     | chi2: 0.017307560618945075
[2025-11-24 05:49:08] 2025-11-24 04:48:09,319 | INFO     | current memory leak: 42.90 B/s (using 211 data points, chi2=0.02)
[2025-11-24 05:49:08] 2025-11-24 04:48:09,319 | INFO     | could have reported an average CPU frequency of 3860 MHz (12 samples)
[2025-11-24 05:49:08] 2025-11-24 04:48:09,319 | INFO     | ..............................
[2025-11-24 05:49:08] 2025-11-24 04:48:09,319 | INFO     | . Timing measurements:
[2025-11-24 05:49:08] 2025-11-24 04:48:09,319 | INFO     | . get job = 0 s
[2025-11-24 05:49:08] 2025-11-24 04:48:09,319 | INFO     | . initial setup = 1 s
[2025-11-24 05:49:08] 2025-11-24 04:48:09,319 | INFO     | . payload setup = 3 s
[2025-11-24 05:49:08] 2025-11-24 04:48:09,319 | INFO     | . stage-in = 0 s
[2025-11-24 05:49:08] 2025-11-24 04:48:09,319 | INFO     | . payload execution = 14705 s
[2025-11-24 05:49:08] 2025-11-24 04:48:09,319 | INFO     | . stage-out = 1 s
[2025-11-24 05:49:08] 2025-11-24 04:48:09,319 | INFO     | . log creation = 0 s
[2025-11-24 05:49:08] 2025-11-24 04:48:09,319 | INFO     | ..............................
[2025-11-24 05:49:08] 2025-11-24 04:48:09,442 | INFO     | time since job start (14731s) is within the limit (172800.0s)
[2025-11-24 05:49:08] 2025-11-24 04:48:09,500 | INFO     | 
[2025-11-24 05:49:08] 2025-11-24 04:48:09,500 | INFO     | job summary report
[2025-11-24 05:49:08] 2025-11-24 04:48:09,500 | INFO     | --------------------------------------------------
[2025-11-24 05:49:08] 2025-11-24 04:48:09,500 | INFO     | PanDA job id: 6895338671
[2025-11-24 05:49:08] 2025-11-24 04:48:09,500 | INFO     | task id: 47556137
[2025-11-24 05:49:08] 2025-11-24 04:48:09,501 | INFO     | errors: (none)
[2025-11-24 05:49:08] 2025-11-24 04:48:09,501 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 05:49:08] 2025-11-24 04:48:09,501 | INFO     | pilot state: finished 
[2025-11-24 05:49:08] 2025-11-24 04:48:09,501 | INFO     | transexitcode: 0
[2025-11-24 05:49:08] 2025-11-24 04:48:09,501 | INFO     | exeerrorcode: 0
[2025-11-24 05:49:08] 2025-11-24 04:48:09,501 | INFO     | exeerrordiag: 
[2025-11-24 05:49:08] 2025-11-24 04:48:09,501 | INFO     | exitcode: 0
[2025-11-24 05:49:08] 2025-11-24 04:48:09,501 | INFO     | exitmsg: OK
[2025-11-24 05:49:08] 2025-11-24 04:48:09,501 | INFO     | cpuconsumptiontime: 170527 s
[2025-11-24 05:49:08] 2025-11-24 04:48:09,501 | INFO     | nevents: 1000
[2025-11-24 05:49:08] 2025-11-24 04:48:09,501 | INFO     | neventsw: 0
[2025-11-24 05:49:08] 2025-11-24 04:48:09,501 | INFO     | pid: 511811
[2025-11-24 05:49:08] 2025-11-24 04:48:09,501 | INFO     | pgrp: 511811
[2025-11-24 05:49:08] 2025-11-24 04:48:09,501 | INFO     | corecount: 12
[2025-11-24 05:49:08] 2025-11-24 04:48:09,501 | INFO     | event service: False
[2025-11-24 05:49:08] 2025-11-24 04:48:09,502 | INFO     | sizes: {0: 2298757, 2: 2299019, 11: 2299047, 14711: 2331106, 14712: 2331105, 14714: 2340169, 14715: 2340353, 14718: 2340599}
[2025-11-24 05:49:08] 2025-11-24 04:48:09,502 | INFO     | --------------------------------------------------
[2025-11-24 05:49:08] 2025-11-24 04:48:09,502 | INFO     | 
[2025-11-24 05:49:08] 2025-11-24 04:48:09,502 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-11-24 05:49:08] 2025-11-24 04:48:09,515 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 05:49:08] 2025-11-24 04:48:09,515 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 05:49:08] 2025-11-24 04:48:09,515 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 05:49:08] 2025-11-24 04:48:09,515 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 05:49:08] 2025-11-24 04:48:09,515 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 05:49:08] 2025-11-24 04:48:09,515 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 05:49:08] 2025-11-24 04:48:09,515 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 05:49:08] 2025-11-24 04:48:09,516 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 05:49:08] 2025-11-24 04:48:09,516 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 05:49:08] 2025-11-24 04:48:09,516 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 05:49:08] 2025-11-24 04:48:09,516 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 05:49:08] 2025-11-24 04:48:09,516 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 05:49:08] 2025-11-24 04:48:09,516 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 05:49:08] 2025-11-24 04:48:09,516 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 05:49:08] 2025-11-24 04:48:09,516 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 05:49:08] 2025-11-24 04:48:09,516 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 05:49:08] 2025-11-24 04:48:09,516 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 05:49:08] 2025-11-24 04:48:09,516 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 05:49:08] 2025-11-24 04:48:09,516 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 05:49:08] 2025-11-24 04:48:09,516 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 05:49:08] 2025-11-24 04:48:09,516 | INFO     | job 6895338671 has completed (purged errors)
[2025-11-24 05:49:08] 2025-11-24 04:48:09,516 | INFO     | overall cleanup function is called
[2025-11-24 05:49:08] 2025-11-24 04:48:10,525 | INFO     | --- collectZombieJob: --- 10, [511811]
[2025-11-24 05:49:08] 2025-11-24 04:48:10,525 | INFO     | zombie collector waiting for pid 511811
[2025-11-24 05:49:08] 2025-11-24 04:48:10,526 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 05:49:08] 2025-11-24 04:48:10,526 | INFO     | collected zombie processes
[2025-11-24 05:49:08] 2025-11-24 04:48:10,526 | INFO     | will attempt to kill all subprocesses of pid=511811
[2025-11-24 05:49:08] 2025-11-24 04:48:10,581 | INFO     | process IDs to be killed: [511811] (in reverse order)
[2025-11-24 05:49:08] 2025-11-24 04:48:10,608 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 05:49:08] 2025-11-24 04:48:10,608 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 05:49:08] 2025-11-24 04:48:10,610 | INFO     | did not find any defunct processes belonging to 511811
[2025-11-24 05:49:08] 2025-11-24 04:48:10,611 | INFO     | did not find any defunct processes belonging to 511811
[2025-11-24 05:49:08] 2025-11-24 04:48:10,612 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 05:49:08] 2025-11-24 04:48:10,612 | INFO     | ready for new job
[2025-11-24 05:49:08] 2025-11-24 04:48:10,612 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 05:49:08] 2025-11-24 04:48:10,613 | INFO     | ***************************************
[2025-11-24 05:49:08] 2025-11-24 04:48:10,613 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 05:49:08] 2025-11-24 04:48:10,613 | INFO     | ***************************************
[2025-11-24 05:49:08] 2025-11-24 04:48:10,613 | INFO     | 
[2025-11-24 05:49:08] 2025-11-24 04:48:10,614 | INFO     | architecture information:
[2025-11-24 05:49:08] 2025-11-24 04:48:10,614 | INFO     | executing command: cat /etc/os-release
[2025-11-24 05:49:08] 2025-11-24 04:48:10,624 | INFO     | cat /etc/os-release:
[2025-11-24 05:49:08] NAME="CentOS Linux"
[2025-11-24 05:49:08] VERSION="7 (Core)"
[2025-11-24 05:49:08] ID="centos"
[2025-11-24 05:49:08] ID_LIKE="rhel fedora"
[2025-11-24 05:49:08] VERSION_ID="7"
[2025-11-24 05:49:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 05:49:08] ANSI_COLOR="0;31"
[2025-11-24 05:49:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 05:49:08] HOME_URL="https://www.centos.org/"
[2025-11-24 05:49:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 05:49:08] 
[2025-11-24 05:49:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 05:49:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 05:49:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 05:49:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 05:49:08] 
[2025-11-24 05:49:08] 2025-11-24 04:48:10,625 | INFO     | ***************************************
[2025-11-24 05:49:08] 2025-11-24 04:48:11,127 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-11-24 05:49:08] 2025-11-24 04:48:11,141 | INFO     | sufficient remaining disk space (761112035328 B)
[2025-11-24 05:49:08] 2025-11-24 04:48:11,141 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 05:49:08] 2025-11-24 04:48:11,141 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 05:49:08] 2025-11-24 04:48:11,141 | INFO     | update_server=False
[2025-11-24 05:49:08] 2025-11-24 04:48:11,141 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 05:49:08] 2025-11-24 04:48:11,141 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-24 05:49:08] 2025-11-24 04:48:11,141 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 05:49:08] 2025-11-24 04:48:11,141 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 05:49:08] 2025-11-24 04:48:11,141 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 05:49:08] 2025-11-24 04:48:11,142 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 05:49:08] 2025-11-24 04:48:11,142 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 05:49:08] 2025-11-24 04:48:11,500 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 05:49:08] 2025-11-24 04:48:11,501 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 05:49:08] 2025-11-24 04:48:11,501 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 05:49:08] 2025-11-24 04:48:11,501 | INFO     | will abort loop
[2025-11-24 05:49:08] 2025-11-24 04:48:11,548 | INFO     | all data control threads have been joined
[2025-11-24 05:49:08] 2025-11-24 04:48:11,800 | INFO     | all payload control threads have been joined
[2025-11-24 05:49:08] 2025-11-24 04:48:12,143 | INFO     | [job] queue monitor thread has finished
[2025-11-24 05:49:08] 2025-11-24 04:48:12,146 | INFO     | [job] retrieve thread has finished
[2025-11-24 05:49:08] 2025-11-24 04:48:12,248 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 05:49:08] 2025-11-24 04:48:12,347 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 05:49:08] 2025-11-24 04:48:12,397 | INFO     | [payload] failed_post thread has finished
[2025-11-24 05:49:08] 2025-11-24 04:48:12,461 | INFO     | all job control threads have been joined
[2025-11-24 05:49:08] 2025-11-24 04:48:12,506 | INFO     | [job] job monitor thread has finished
[2025-11-24 05:49:08] 2025-11-24 04:48:12,549 | INFO     | [data] control thread has finished
[2025-11-24 05:49:08] 2025-11-24 04:48:12,622 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 05:49:08] 2025-11-24 04:48:12,780 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 05:49:08] 2025-11-24 04:48:12,801 | INFO     | [payload] control thread has finished
[2025-11-24 05:49:08] 2025-11-24 04:48:13,147 | INFO     | [data] copytool_out thread has finished
[2025-11-24 05:49:08] 2025-11-24 04:48:13,183 | INFO     | [data] copytool_in thread has finished
[2025-11-24 05:49:08] 2025-11-24 04:48:13,353 | INFO     | [job] validate thread has finished
[2025-11-24 05:49:08] 2025-11-24 04:48:13,467 | INFO     | [job] control thread has finished
[2025-11-24 05:49:08] 2025-11-24 04:48:13,658 | INFO     | [payload] validate_post thread has finished
[2025-11-24 05:49:08] 2025-11-24 04:48:16,786 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 05:49:08] 2025-11-24 04:48:21,733 | INFO     | job.realtimelogging is not enabled
[2025-11-24 05:49:08] 2025-11-24 04:48:22,739 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 05:49:08] 2025-11-24 04:49:02,726 | INFO     | [monitor] cgroup control has ended
[2025-11-24 05:49:08] 2025-11-24 04:49:03,199 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139747115206464)>', '<ExcThread(monitor, started 139746156214016)>']
[2025-11-24 05:49:08] 2025-11-24 04:49:03,365 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 05:49:08] 2025-11-24 04:49:03,365 | INFO     | [monitor] control thread has ended
[2025-11-24 05:49:08] 2025-11-24 04:49:08,224 | INFO     | all workflow threads have been joined
[2025-11-24 05:49:08] 2025-11-24 04:49:08,238 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 05:49:08] 2025-11-24 04:49:08,238 | INFO     | traces error code: 0
[2025-11-24 05:49:08] 2025-11-24 04:49:08,238 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 05:49:08] 2025-11-24 04:49:08,308 [wrapper] ==== pilot stdout END ====
[2025-11-24 05:49:08] 2025-11-24 04:49:08,309 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 05:49:08] 2025-11-24 04:49:08,311 [wrapper] pilotpid: 505065
[2025-11-24 05:49:08] 2025-11-24 04:49:08,312 [wrapper] Pilot exit status: 0
[2025-11-24 05:49:08] 2025-11-24 04:49:08,317 [wrapper] pandaids: 6895338671
[2025-11-24 05:49:08] 2025-11-24 04:49:08,331 [wrapper] cleanup supervisor_pilot  541610 505066
[2025-11-24 05:49:08] 2025-11-24 04:49:08,333 [wrapper] Test setup, not cleaning
[2025-11-24 05:49:08] 2025-11-24 04:49:08,334 [wrapper] apfmon messages muted
[2025-11-24 05:49:08] 2025-11-24 04:49:08,335 [wrapper] ==== wrapper stdout END ====
[2025-11-24 05:49:08] 2025-11-24 04:49:08,336 [wrapper] ==== wrapper stderr END ====
[2025-11-24 05:49:08]  *** Error codes and diagnostics ***
[2025-11-24 05:49:08]     "exeErrorCode": 0,
[2025-11-24 05:49:08]     "exeErrorDiag": "",
[2025-11-24 05:49:08]     "pilotErrorCode": 0,
[2025-11-24 05:49:08]     "pilotErrorDiag": "",
[2025-11-24 05:49:08]  *** Listing of results directory ***
[2025-11-24 05:49:08] total 1306556
[2025-11-24 05:49:08] -rw-r--r-- 1 boinc boinc    576529 Nov 22 10:42 pilot3.tar.gz
[2025-11-24 05:49:08] -rw-r--r-- 1 boinc boinc      5112 Nov 22 10:48 queuedata.json
[2025-11-24 05:49:08] -rwx------ 1 boinc boinc     36292 Nov 22 10:51 runpilot2-wrapper.sh
[2025-11-24 05:49:08] -rw-r--r-- 1 boinc boinc       100 Nov 24 01:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 05:49:08] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 01:42 run_atlas
[2025-11-24 05:49:08] -rw-r--r-- 1 boinc boinc       105 Nov 24 01:42 job.xml
[2025-11-24 05:49:08] -rw-r--r-- 2 boinc boinc     15847 Nov 24 01:42 start_atlas.sh
[2025-11-24 05:49:08] drwxrwx--x 2 boinc boinc      4096 Nov 24 01:42 shared
[2025-11-24 05:49:08] -rw-r--r-- 2 boinc boinc    590101 Nov 24 01:42 input.tar.gz
[2025-11-24 05:49:08] -rw-r--r-- 1 boinc boinc      6727 Nov 24 01:42 init_data.xml
[2025-11-24 05:49:08] -rw-r--r-- 2 boinc boinc 409160292 Nov 24 01:42 EVNT.47483658._000337.pool.root.1
[2025-11-24 05:49:08] -rw-r--r-- 1 boinc boinc         0 Nov 24 01:42 boinc_lockfile
[2025-11-24 05:49:08] -rw-r--r-- 1 boinc boinc      2782 Nov 24 01:42 pandaJob.out
[2025-11-24 05:49:08] -rw------- 1 boinc boinc    989786 Nov 24 01:42 agis_schedconf.cvmfs.json
[2025-11-24 05:49:08] drwx------ 5 boinc boinc      4096 Nov 24 01:42 pilot3
[2025-11-24 05:49:08] -rw-r--r-- 1 boinc boinc       533 Nov 24 05:43 boinc_task_state.xml
[2025-11-24 05:49:08] -rw------- 1 boinc boinc        95 Nov 24 05:47 pilot_heartbeat.json
[2025-11-24 05:49:08] -rw------- 1 boinc boinc 916701179 Nov 24 05:47 HITS.47556137._003331.pool.root.1
[2025-11-24 05:49:08] -rw------- 1 boinc boinc      1028 Nov 24 05:47 memory_monitor_summary.json
[2025-11-24 05:49:08] -rw------- 1 boinc boinc   1526164 Nov 24 05:48 agis_ddmendpoints.agis.ALL.json
[2025-11-24 05:49:08] -rw------- 1 boinc boinc   1964176 Nov 24 05:48 log.47556137._003331.job.log.tgz.1
[2025-11-24 05:49:08] -rw------- 1 boinc boinc      8600 Nov 24 05:48 heartbeat.json
[2025-11-24 05:49:08] -rw-r--r-- 1 boinc boinc        29 Nov 24 05:49 wrapper_checkpoint.txt
[2025-11-24 05:49:08] -rw-r--r-- 1 boinc boinc      8192 Nov 24 05:49 boinc_mmap_file
[2025-11-24 05:49:08] -rw------- 1 boinc boinc      4818 Nov 24 05:49 pilotlog.txt
[2025-11-24 05:49:08] -rw------- 1 boinc boinc   2101055 Nov 24 05:49 log.47556137._003331.job.log.1
[2025-11-24 05:49:08] -rw------- 1 boinc boinc       353 Nov 24 05:49 output.list
[2025-11-24 05:49:08] -rw-r--r-- 1 boinc boinc       620 Nov 24 05:49 runtime_log
[2025-11-24 05:49:08] -rw------- 1 boinc boinc   4085760 Nov 24 05:49 result.tar.gz
[2025-11-24 05:49:08] -rw-r--r-- 1 boinc boinc      9133 Nov 24 05:49 runtime_log.err
[2025-11-24 05:49:08] -rw------- 1 boinc boinc       714 Nov 24 05:49 eObLDmOSzg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm65JKDmCbyMDo.diag
[2025-11-24 05:49:08] -rw-r--r-- 1 boinc boinc     21351 Nov 24 05:49 stderr.txt
[2025-11-24 05:49:08] HITS file was successfully produced:
[2025-11-24 05:49:08] -rw------- 1 boinc boinc 916701179 Nov 24 05:47 shared/HITS.pool.root.1
[2025-11-24 05:49:08]  *** Contents of shared directory: ***
[2025-11-24 05:49:08] total 1299384
[2025-11-24 05:49:08] -rw-r--r-- 2 boinc boinc     15847 Nov 24 01:42 start_atlas.sh
[2025-11-24 05:49:08] -rw-r--r-- 2 boinc boinc    590101 Nov 24 01:42 input.tar.gz
[2025-11-24 05:49:08] -rw-r--r-- 2 boinc boinc 409160292 Nov 24 01:42 ATLAS.root_0
[2025-11-24 05:49:08] -rw------- 1 boinc boinc 916701179 Nov 24 05:47 HITS.pool.root.1
[2025-11-24 05:49:08] -rw------- 1 boinc boinc   4085760 Nov 24 05:49 result.tar.gz
05:49:09 (501216): run_atlas exited; CPU time 170362.650476
05:49:09 (501216): called boinc_finish(0)

</stderr_txt>
]]>

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