Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:45:47 (1501812): wrapper (7.7.26015): starting
09:45:47 (1501812): wrapper: running run_atlas (--nthreads 3)
[2025-11-26 09:45:47] Arguments: --nthreads 3
[2025-11-26 09:45:47] Threads: 3
[2025-11-26 09:45:47] Checking for CVMFS
[2025-11-26 09:45:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 09:45:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 09:45:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 09:45:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 09:45:47] 2.9.2.0 4188978 11123 93556 153315 2 81 34739550 36864000 0 130560 0 4147656 99.865 664997 8475 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 09:45:47] CVMFS is ok
[2025-11-26 09:45:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 09:45:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 09:45:47] Further information can be found at the LHC@home message board.
[2025-11-26 09:45:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 09:45:47] Checking for apptainer binary...
[2025-11-26 09:45:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 09:45:47] Running /usr/bin/apptainer --version
[2025-11-26 09:45:47] apptainer version 1.4.1-1.1
[2025-11-26 09:45:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 09:45:47] atlasA228b
[2025-11-26 09:45:47] apptainer works
[2025-11-26 09:45:47] Set ATHENA_PROC_NUMBER=3
[2025-11-26 09:45:47] Set ATHENA_CORE_NUMBER=3
[2025-11-26 09:45:47] Starting ATLAS job with PandaID=6895351261
[2025-11-26 09:45:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 17:38:31]  *** The last 200 lines of the pilot log: ***
[2025-11-26 17:38:31] 2025-11-26 16:37:45,977 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 17:38:31] 2025-11-26 16:37:45,977 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 17:38:31] 2025-11-26 16:37:46,160 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:38:31] 2025-11-26 16:37:46,160 | INFO     | aborting loop
[2025-11-26 17:38:31] 2025-11-26 16:37:46,534 | INFO     | all payload control threads have been joined
[2025-11-26 17:38:31] 2025-11-26 16:37:46,649 | INFO     | all data control threads have been joined
[2025-11-26 17:38:31] 2025-11-26 16:37:46,793 | INFO     | all job control threads have been joined
[2025-11-26 17:38:31] 2025-11-26 16:37:46,982 | INFO     | [job] retrieve thread has finished
[2025-11-26 17:38:31] 2025-11-26 16:37:46,983 | INFO     | [job] queue monitor thread has finished
[2025-11-26 17:38:31] 2025-11-26 16:37:47,118 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 17:38:31] 2025-11-26 16:37:47,123 | INFO     | [payload] failed_post thread has finished
[2025-11-26 17:38:31] 2025-11-26 16:37:47,165 | INFO     | [job] job monitor thread has finished
[2025-11-26 17:38:31] 2025-11-26 16:37:47,192 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 17:38:31] 2025-11-26 16:37:47,540 | INFO     | [payload] control thread has finished
[2025-11-26 17:38:31] 2025-11-26 16:37:47,655 | INFO     | [data] control thread has finished
[2025-11-26 17:38:31] 2025-11-26 16:37:47,660 | INFO     | [payload] validate_post thread has finished
[2025-11-26 17:38:31] 2025-11-26 16:37:47,798 | INFO     | [job] control thread has finished
[2025-11-26 17:38:31] 2025-11-26 16:37:47,942 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 17:38:31] 2025-11-26 16:37:47,955 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 17:38:31] 2025-11-26 16:37:48,170 | INFO     | [data] copytool_in thread has finished
[2025-11-26 17:38:31] 2025-11-26 16:37:48,247 | INFO     | [job] validate thread has finished
[2025-11-26 17:38:31] 2025-11-26 16:37:48,249 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 17:38:31] 2025-11-26 16:37:48,255 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 17:38:31] 2025-11-26 16:37:49,124 | INFO     | [data] copytool_out thread has finished
[2025-11-26 17:38:31] 2025-11-26 16:37:51,199 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 17:38:31] 2025-11-26 16:38:24,875 | INFO     | [monitor] cgroup control has ended
[2025-11-26 17:38:31] 2025-11-26 16:38:26,800 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140511650080576)>', '<ExcThread(monitor, started 140511297910528)>']
[2025-11-26 17:38:31] 2025-11-26 16:38:27,198 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 17:38:31] 2025-11-26 16:38:27,198 | INFO     | [monitor] control thread has ended
[2025-11-26 17:38:31] 2025-11-26 16:38:31,826 | INFO     | all workflow threads have been joined
[2025-11-26 17:38:31] 2025-11-26 16:38:31,826 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 17:38:31] 2025-11-26 16:38:31,826 | INFO     | traces error code: 0
[2025-11-26 17:38:31] 2025-11-26 16:38:31,827 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 17:38:31] 2025-11-26 16:38:31,880 [wrapper] ==== pilot stdout END ====
[2025-11-26 17:38:31] 2025-11-26 16:38:31,882 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 17:38:31] 2025-11-26 16:38:31,885 [wrapper] pilotpid: 1505532
[2025-11-26 17:38:31] 2025-11-26 16:38:31,887 [wrapper] Pilot exit status: 0
[2025-11-26 17:38:31] 2025-11-26 16:38:31,896 [wrapper] pandaids: 6895351261
[2025-11-26 17:38:31] 2025-11-26 16:38:31,915 [wrapper] cleanup supervisor_pilot 1562550 1505533
[2025-11-26 17:38:31] 2025-11-26 16:38:31,918 [wrapper] Test setup, not cleaning
[2025-11-26 17:38:31] 2025-11-26 16:38:31,920 [wrapper] apfmon messages muted
[2025-11-26 17:38:31] 2025-11-26 16:38:31,923 [wrapper] ==== wrapper stdout END ====
[2025-11-26 17:38:31] 2025-11-26 16:38:31,925 [wrapper] ==== wrapper stderr END ====
[2025-11-26 17:38:31]  *** Error codes and diagnostics ***
[2025-11-26 17:38:31]     "exeErrorCode": 0,
[2025-11-26 17:38:31]     "exeErrorDiag": "",
[2025-11-26 17:38:31]     "pilotErrorCode": 0,
[2025-11-26 17:38:31]     "pilotErrorDiag": "",
[2025-11-26 17:38:31]  *** Listing of results directory ***
[2025-11-26 17:38:31] total 1303260
[2025-11-26 17:38:31] -rw-r--r-- 1 boinc boinc    576529 Nov 23 00:50 pilot3.tar.gz
[2025-11-26 17:38:31] -rwx------ 1 boinc boinc     36292 Nov 23 01:10 runpilot2-wrapper.sh
[2025-11-26 17:38:31] -rw-r--r-- 1 boinc boinc      5112 Nov 23 01:10 queuedata.json
[2025-11-26 17:38:31] -rw-r--r-- 1 boinc boinc       100 Nov 26 09:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 17:38:31] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 09:45 run_atlas
[2025-11-26 17:38:31] -rw-r--r-- 1 boinc boinc       105 Nov 26 09:45 job.xml
[2025-11-26 17:38:31] -rw-r--r-- 2 boinc boinc 408086083 Nov 26 09:45 EVNT.47483658._000544.pool.root.1
[2025-11-26 17:38:31] drwxrwx--x 2 boinc boinc      4096 Nov 26 09:45 shared
[2025-11-26 17:38:31] -rw-r--r-- 2 boinc boinc    590095 Nov 26 09:45 input.tar.gz
[2025-11-26 17:38:31] -rw-r--r-- 2 boinc boinc     15847 Nov 26 09:45 start_atlas.sh
[2025-11-26 17:38:31] -rw-r--r-- 1 boinc boinc         0 Nov 26 09:45 boinc_setup_complete
[2025-11-26 17:38:31] -rw-r--r-- 1 boinc boinc      6450 Nov 26 09:45 init_data.xml
[2025-11-26 17:38:31] -rw-r--r-- 1 boinc boinc         0 Nov 26 09:45 boinc_lockfile
[2025-11-26 17:38:31] -rw-r--r-- 1 boinc boinc      2784 Nov 26 09:45 pandaJob.out
[2025-11-26 17:38:31] -rw------- 1 boinc boinc    991877 Nov 26 09:45 agis_schedconf.cvmfs.json
[2025-11-26 17:38:31] drwx------ 5 boinc boinc      4096 Nov 26 09:45 pilot3
[2025-11-26 17:38:31] -rw-r--r-- 1 boinc boinc       532 Nov 26 17:33 boinc_task_state.xml
[2025-11-26 17:38:31] -rw------- 1 boinc boinc 912265707 Nov 26 17:37 HITS.47556137._005399.pool.root.1
[2025-11-26 17:38:31] -rw------- 1 boinc boinc        95 Nov 26 17:37 pilot_heartbeat.json
[2025-11-26 17:38:31] -rw------- 1 boinc boinc      1021 Nov 26 17:37 memory_monitor_summary.json
[2025-11-26 17:38:31] -rw------- 1 boinc boinc   1516240 Nov 26 17:37 agis_ddmendpoints.agis.ALL.json
[2025-11-26 17:38:31] -rw------- 1 boinc boinc   1159777 Nov 26 17:37 log.47556137._005399.job.log.tgz.1
[2025-11-26 17:38:31] -rw------- 1 boinc boinc      8565 Nov 26 17:37 heartbeat.json
[2025-11-26 17:38:31] -rw-r--r-- 1 boinc boinc        28 Nov 26 17:38 wrapper_checkpoint.txt
[2025-11-26 17:38:31] -rw-r--r-- 1 boinc boinc      8192 Nov 26 17:38 boinc_mmap_file
[2025-11-26 17:38:31] -rw------- 1 boinc boinc      4556 Nov 26 17:38 pilotlog.txt
[2025-11-26 17:38:31] -rw------- 1 boinc boinc   3985040 Nov 26 17:38 log.47556137._005399.job.log.1
[2025-11-26 17:38:31] -rw------- 1 boinc boinc       353 Nov 26 17:38 output.list
[2025-11-26 17:38:31] -rw-r--r-- 1 boinc boinc       620 Nov 26 17:38 runtime_log
[2025-11-26 17:38:31] -rw------- 1 boinc boinc   5160960 Nov 26 17:38 result.tar.gz
[2025-11-26 17:38:31] -rw-r--r-- 1 boinc boinc      8918 Nov 26 17:38 runtime_log.err
[2025-11-26 17:38:31] -rw------- 1 boinc boinc       669 Nov 26 17:38 poFLDmMrCh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm7SKKDmJJ9sPm.diag
[2025-11-26 17:38:31] -rw-r--r-- 1 boinc boinc      6761 Nov 26 17:38 stderr.txt
[2025-11-26 17:38:31] HITS file was successfully produced:
[2025-11-26 17:38:31] -rw------- 1 boinc boinc 912265707 Nov 26 17:37 shared/HITS.pool.root.1
[2025-11-26 17:38:31]  *** Contents of shared directory: ***
[2025-11-26 17:38:31] total 1295052
[2025-11-26 17:38:31] -rw-r--r-- 2 boinc boinc 408086083 Nov 26 09:45 ATLAS.root_0
[2025-11-26 17:38:31] -rw-r--r-- 2 boinc boinc    590095 Nov 26 09:45 input.tar.gz
[2025-11-26 17:38:31] -rw-r--r-- 2 boinc boinc     15847 Nov 26 09:45 start_atlas.sh
[2025-11-26 17:38:31] -rw------- 1 boinc boinc 912265707 Nov 26 17:37 HITS.pool.root.1
[2025-11-26 17:38:31] -rw------- 1 boinc boinc   5160960 Nov 26 17:38 result.tar.gz
17:38:33 (1501812): run_atlas exited; CPU time 83407.896663
17:38:33 (1501812): called boinc_finish(0)

</stderr_txt>
]]>

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