Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:11:42 (3719503): wrapper (7.7.26015): starting
21:11:42 (3719503): wrapper: running run_atlas (--nthreads 3)
[2025-11-23 21:11:42] Arguments: --nthreads 3
[2025-11-23 21:11:42] Threads: 3
[2025-11-23 21:11:42] Checking for CVMFS
[2025-11-23 21:11:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 21:11:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 21:11:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 21:11:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 21:11:44] 2.9.2.0 3719626 0 30024 153219 3 1 34898623 36864001 0 130560 0 0 100.000 0 0 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-23 21:11:44] CVMFS is ok
[2025-11-23 21:11:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 21:11:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 21:11:44] Further information can be found at the LHC@home message board.
[2025-11-23 21:11:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 21:11:44] Checking for apptainer binary...
[2025-11-23 21:11:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 21:11:44] Running /usr/bin/apptainer --version
[2025-11-23 21:11:44] apptainer version 1.4.1-1.1
[2025-11-23 21:11:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 21:11:44] thA335
[2025-11-23 21:11:44] apptainer works
[2025-11-23 21:11:44] Set ATHENA_PROC_NUMBER=3
[2025-11-23 21:11:44] Set ATHENA_CORE_NUMBER=3
[2025-11-23 21:11:44] Starting ATLAS job with PandaID=6895351214
[2025-11-23 21:11:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 21:16:05]  *** The last 200 lines of the pilot log: ***
[2025-11-23 21:16:05] 2025-11-23 20:15:16,679 | INFO     | ***************************************
[2025-11-23 21:16:05] 2025-11-23 20:15:17,182 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-23 21:16:05] 2025-11-23 20:15:17,196 | INFO     | sufficient remaining disk space (827548762112 B)
[2025-11-23 21:16:05] 2025-11-23 20:15:17,196 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 21:16:05] 2025-11-23 20:15:17,196 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 21:16:05] 2025-11-23 20:15:17,196 | INFO     | update_server=False
[2025-11-23 21:16:05] 2025-11-23 20:15:17,196 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 21:16:05] 2025-11-23 20:15:17,196 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 21:16:05] 2025-11-23 20:15:17,196 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 21:16:05] 2025-11-23 20:15:17,196 | INFO     | aborting loop
[2025-11-23 21:16:05] 2025-11-23 20:15:18,141 | INFO     | all job control threads have been joined
[2025-11-23 21:16:05] 2025-11-23 20:15:18,168 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 21:16:05] 2025-11-23 20:15:18,200 | INFO     | [job] job monitor thread has finished
[2025-11-23 21:16:05] 2025-11-23 20:15:18,202 | INFO     | [job] retrieve thread has finished
[2025-11-23 21:16:05] 2025-11-23 20:15:18,202 | INFO     | [job] queue monitor thread has finished
[2025-11-23 21:16:05] 2025-11-23 20:15:18,203 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 21:16:05] 2025-11-23 20:15:18,253 | INFO     | all data control threads have been joined
[2025-11-23 21:16:05] 2025-11-23 20:15:18,256 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 21:16:05] 2025-11-23 20:15:18,504 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 21:16:05] 2025-11-23 20:15:18,577 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 21:16:05] 2025-11-23 20:15:18,679 | INFO     | all payload control threads have been joined
[2025-11-23 21:16:05] 2025-11-23 20:15:19,081 | INFO     | [data] copytool_in thread has finished
[2025-11-23 21:16:05] 2025-11-23 20:15:19,147 | INFO     | [job] control thread has finished
[2025-11-23 21:16:05] 2025-11-23 20:15:19,160 | INFO     | [payload] failed_post thread has finished
[2025-11-23 21:16:05] 2025-11-23 20:15:19,259 | INFO     | [data] control thread has finished
[2025-11-23 21:16:05] 2025-11-23 20:15:19,584 | INFO     | [payload] validate_post thread has finished
[2025-11-23 21:16:05] 2025-11-23 20:15:19,620 | INFO     | [job] validate thread has finished
[2025-11-23 21:16:05] 2025-11-23 20:15:19,685 | INFO     | [payload] control thread has finished
[2025-11-23 21:16:05] 2025-11-23 20:15:20,174 | INFO     | [data] copytool_out thread has finished
[2025-11-23 21:16:05] 2025-11-23 20:15:20,319 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 21:16:05] 2025-11-23 20:15:24,326 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 21:16:05] 2025-11-23 20:15:47,300 | INFO     | PID=3723717 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 21:16:05] 2025-11-23 20:15:47,300 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 21:16:05] 2025-11-23 20:15:47,300 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 21:16:05] 2025-11-23 20:15:47,300 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 21:16:05] 2025-11-23 20:15:58,451 | INFO     | [monitor] cgroup control has ended
[2025-11-23 21:16:05] 2025-11-23 20:16:00,171 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139832280770368)>', '<ExcThread(monitor, started 139831518689024)>']
[2025-11-23 21:16:05] 2025-11-23 20:16:00,367 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 21:16:05] 2025-11-23 20:16:00,367 | INFO     | [monitor] control thread has ended
[2025-11-23 21:16:05] 2025-11-23 20:16:05,197 | INFO     | all workflow threads have been joined
[2025-11-23 21:16:05] 2025-11-23 20:16:05,198 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 21:16:05] 2025-11-23 20:16:05,198 | INFO     | traces error code: 0
[2025-11-23 21:16:05] 2025-11-23 20:16:05,199 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 21:16:05] 2025-11-23 20:16:05,261 [wrapper] ==== pilot stdout END ====
[2025-11-23 21:16:05] 2025-11-23 20:16:05,264 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 21:16:05] 2025-11-23 20:16:05,267 [wrapper] pilotpid: 3723717
[2025-11-23 21:16:05] 2025-11-23 20:16:05,270 [wrapper] Pilot exit status: 0
[2025-11-23 21:16:05] 2025-11-23 20:16:05,277 [wrapper] pandaids: 6895351214
[2025-11-23 21:16:05] 2025-11-23 20:16:05,296 [wrapper] cleanup supervisor_pilot 3723723 3723718
[2025-11-23 21:16:05] 2025-11-23 20:16:05,298 [wrapper] Test setup, not cleaning
[2025-11-23 21:16:05] 2025-11-23 20:16:05,301 [wrapper] apfmon messages muted
[2025-11-23 21:16:05] 2025-11-23 20:16:05,303 [wrapper] ==== wrapper stdout END ====
[2025-11-23 21:16:05] 2025-11-23 20:16:05,306 [wrapper] ==== wrapper stderr END ====
[2025-11-23 21:16:05]  *** Error codes and diagnostics ***
[2025-11-23 21:16:05]     "exeErrorCode": 65,
[2025-11-23 21:16:05]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-23 21:16:05]     "pilotErrorCode": 1305,
[2025-11-23 21:16:05]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-23 21:16:05]  *** Listing of results directory ***
[2025-11-23 21:16:05] total 404168
[2025-11-23 21:16:05] -rw-r--r-- 1 boinc boinc    576529 Nov 23 00:34 pilot3.tar.gz
[2025-11-23 21:16:05] -rwx------ 1 boinc boinc     36292 Nov 23 00:34 runpilot2-wrapper.sh
[2025-11-23 21:16:05] -rw-r--r-- 1 boinc boinc      5112 Nov 23 00:34 queuedata.json
[2025-11-23 21:16:05] -rw-r--r-- 1 boinc boinc       100 Nov 23 21:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 21:16:05] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 21:11 run_atlas
[2025-11-23 21:16:05] -rw-r--r-- 1 boinc boinc       105 Nov 23 21:11 job.xml
[2025-11-23 21:16:05] -rw-r--r-- 2 boinc boinc 409665514 Nov 23 21:11 EVNT.47483658._001123.pool.root.1
[2025-11-23 21:16:05] -rw-r--r-- 2 boinc boinc    590093 Nov 23 21:11 input.tar.gz
[2025-11-23 21:16:05] -rw-r--r-- 2 boinc boinc     15847 Nov 23 21:11 start_atlas.sh
[2025-11-23 21:16:05] drwxrwx--x 2 boinc boinc      4096 Nov 23 21:11 shared
[2025-11-23 21:16:05] -rw-r--r-- 1 boinc boinc         0 Nov 23 21:11 boinc_setup_complete
[2025-11-23 21:16:05] -rw-r--r-- 1 boinc boinc      6195 Nov 23 21:11 init_data.xml
[2025-11-23 21:16:05] -rw-r--r-- 1 boinc boinc         0 Nov 23 21:11 boinc_lockfile
[2025-11-23 21:16:05] -rw-r--r-- 1 boinc boinc      2781 Nov 23 21:11 pandaJob.out
[2025-11-23 21:16:05] -rw------- 1 boinc boinc    989786 Nov 23 21:11 agis_schedconf.cvmfs.json
[2025-11-23 21:16:05] -rw------- 1 boinc boinc   1526164 Nov 23 21:11 agis_ddmendpoints.agis.ALL.json
[2025-11-23 21:16:05] drwx------ 5 boinc boinc      4096 Nov 23 21:11 pilot3
[2025-11-23 21:16:05] -rw-r--r-- 1 boinc boinc       522 Nov 23 21:12 boinc_task_state.xml
[2025-11-23 21:16:05] -rw------- 1 boinc boinc       951 Nov 23 21:13 memory_monitor_summary.json
[2025-11-23 21:16:05] -rw------- 1 boinc boinc     56160 Nov 23 21:13 log.47556149._001091.job.log.tgz.1
[2025-11-23 21:16:05] -rw------- 1 boinc boinc        95 Nov 23 21:14 pilot_heartbeat.json
[2025-11-23 21:16:05] -rw------- 1 boinc boinc      8400 Nov 23 21:15 heartbeat.json
[2025-11-23 21:16:05] -rw-r--r-- 1 boinc boinc        22 Nov 23 21:15 wrapper_checkpoint.txt
[2025-11-23 21:16:05] -rw-r--r-- 1 boinc boinc      8192 Nov 23 21:15 boinc_mmap_file
[2025-11-23 21:16:05] -rw------- 1 boinc boinc      4752 Nov 23 21:16 pilotlog.txt
[2025-11-23 21:16:05] -rw------- 1 boinc boinc     93472 Nov 23 21:16 log.47556149._001091.job.log.1
[2025-11-23 21:16:05] -rw------- 1 boinc boinc       186 Nov 23 21:16 output.list
[2025-11-23 21:16:05] -rw-r--r-- 1 boinc boinc       620 Nov 23 21:16 runtime_log
[2025-11-23 21:16:05] -rw------- 1 boinc boinc    174080 Nov 23 21:16 result.tar.gz
[2025-11-23 21:16:05] -rw-r--r-- 1 boinc boinc      8744 Nov 23 21:16 runtime_log.err
[2025-11-23 21:16:05] -rw------- 1 boinc boinc       648 Nov 23 21:16 lSDLDmOICh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPSKKDmGq6GXn.diag
[2025-11-23 21:16:05] -rw-r--r-- 1 boinc boinc      8321 Nov 23 21:16 stderr.txt
[2025-11-23 21:16:05] No HITS result produced
[2025-11-23 21:16:05]  *** Contents of shared directory: ***
[2025-11-23 21:16:05] total 400832
[2025-11-23 21:16:05] -rw-r--r-- 2 boinc boinc 409665514 Nov 23 21:11 ATLAS.root_0
[2025-11-23 21:16:05] -rw-r--r-- 2 boinc boinc    590093 Nov 23 21:11 input.tar.gz
[2025-11-23 21:16:05] -rw-r--r-- 2 boinc boinc     15847 Nov 23 21:11 start_atlas.sh
[2025-11-23 21:16:05] -rw------- 1 boinc boinc    174080 Nov 23 21:16 result.tar.gz
21:16:06 (3719503): run_atlas exited; CPU time 31.559923
21:16:06 (3719503): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN