Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:47:02 (1197531): wrapper (7.7.26015): starting
07:47:02 (1197531): wrapper: running run_atlas (--nthreads 3)
[2025-11-26 07:47:02] Arguments: --nthreads 3
[2025-11-26 07:47:02] Threads: 3
[2025-11-26 07:47:02] Checking for CVMFS
[2025-11-26 07:47:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 07:47:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 07:47:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 07:47:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 07:47:02] 2.9.2.0 3943730 10828 87384 153312 1 81 30088582 36864001 0 130560 0 4014022 99.935 548698 4811 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 07:47:02] CVMFS is ok
[2025-11-26 07:47:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 07:47:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 07:47:02] Further information can be found at the LHC@home message board.
[2025-11-26 07:47:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 07:47:02] Checking for apptainer binary...
[2025-11-26 07:47:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 07:47:02] Running /usr/bin/apptainer --version
[2025-11-26 07:47:02] apptainer version 1.4.1-1.1
[2025-11-26 07:47:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 07:47:02] thA331a
[2025-11-26 07:47:02] apptainer works
[2025-11-26 07:47:02] Set ATHENA_PROC_NUMBER=3
[2025-11-26 07:47:02] Set ATHENA_CORE_NUMBER=3
[2025-11-26 07:47:02] Starting ATLAS job with PandaID=6895339632
[2025-11-26 07:47:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 15:48:47]  *** The last 200 lines of the pilot log: ***
[2025-11-26 15:48:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 15:48:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 15:48:47] 
[2025-11-26 15:48:47] 2025-11-26 14:47:44,214 | INFO     | ***************************************
[2025-11-26 15:48:47] 2025-11-26 14:47:44,717 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-26 15:48:47] 2025-11-26 14:47:44,730 | INFO     | sufficient remaining disk space (327100137472 B)
[2025-11-26 15:48:47] 2025-11-26 14:47:44,730 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 15:48:47] 2025-11-26 14:47:44,730 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 15:48:47] 2025-11-26 14:47:44,730 | INFO     | update_server=False
[2025-11-26 15:48:47] 2025-11-26 14:47:44,730 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 15:48:47] 2025-11-26 14:47:44,730 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 15:48:47] 2025-11-26 14:47:44,731 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 15:48:47] 2025-11-26 14:47:44,731 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 15:48:47] 2025-11-26 14:47:44,731 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 15:48:47] 2025-11-26 14:47:44,731 | INFO     | aborting loop
[2025-11-26 15:48:47] 2025-11-26 14:47:44,743 | INFO     | all data control threads have been joined
[2025-11-26 15:48:47] 2025-11-26 14:47:44,795 | INFO     | all job control threads have been joined
[2025-11-26 15:48:47] 2025-11-26 14:47:45,736 | INFO     | [job] retrieve thread has finished
[2025-11-26 15:48:47] 2025-11-26 14:47:45,736 | INFO     | [job] queue monitor thread has finished
[2025-11-26 15:48:47] 2025-11-26 14:47:45,736 | INFO     | [job] job monitor thread has finished
[2025-11-26 15:48:47] 2025-11-26 14:47:45,748 | INFO     | [data] control thread has finished
[2025-11-26 15:48:47] 2025-11-26 14:47:45,764 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 15:48:47] 2025-11-26 14:47:45,801 | INFO     | [job] control thread has finished
[2025-11-26 15:48:47] 2025-11-26 14:47:45,995 | INFO     | all payload control threads have been joined
[2025-11-26 15:48:47] 2025-11-26 14:47:46,052 | INFO     | [payload] validate_post thread has finished
[2025-11-26 15:48:47] 2025-11-26 14:47:46,121 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 15:48:47] 2025-11-26 14:47:46,730 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 15:48:47] 2025-11-26 14:47:46,737 | INFO     | [data] copytool_out thread has finished
[2025-11-26 15:48:47] 2025-11-26 14:47:46,898 | INFO     | [data] copytool_in thread has finished
[2025-11-26 15:48:47] 2025-11-26 14:47:47,000 | INFO     | [payload] control thread has finished
[2025-11-26 15:48:47] 2025-11-26 14:47:47,123 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 15:48:47] 2025-11-26 14:47:47,133 | INFO     | [payload] failed_post thread has finished
[2025-11-26 15:48:47] 2025-11-26 14:47:47,152 | INFO     | [job] validate thread has finished
[2025-11-26 15:48:47] 2025-11-26 14:47:48,737 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 15:48:47] 2025-11-26 14:48:15,811 | INFO     | PID=1201253 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 15:48:47] 2025-11-26 14:48:15,811 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 15:48:47] 2025-11-26 14:48:15,811 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 15:48:47] 2025-11-26 14:48:15,811 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 15:48:47] 2025-11-26 14:48:41,120 | INFO     | [monitor] cgroup control has ended
[2025-11-26 15:48:47] 2025-11-26 14:48:42,126 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140204848195392)>', '<ExcThread(monitor, started 140204224534272)>']
[2025-11-26 15:48:47] 2025-11-26 14:48:42,952 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 15:48:47] 2025-11-26 14:48:42,952 | INFO     | [monitor] control thread has ended
[2025-11-26 15:48:47] 2025-11-26 14:48:47,152 | INFO     | all workflow threads have been joined
[2025-11-26 15:48:47] 2025-11-26 14:48:47,153 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 15:48:47] 2025-11-26 14:48:47,154 | INFO     | traces error code: 0
[2025-11-26 15:48:47] 2025-11-26 14:48:47,154 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 15:48:47] 2025-11-26 14:48:47,204 [wrapper] ==== pilot stdout END ====
[2025-11-26 15:48:47] 2025-11-26 14:48:47,206 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 15:48:47] 2025-11-26 14:48:47,208 [wrapper] pilotpid: 1201253
[2025-11-26 15:48:47] 2025-11-26 14:48:47,211 [wrapper] Pilot exit status: 0
[2025-11-26 15:48:47] 2025-11-26 14:48:47,218 [wrapper] pandaids: 6895339632
[2025-11-26 15:48:47] 2025-11-26 14:48:47,233 [wrapper] cleanup supervisor_pilot 1258833 1201254
[2025-11-26 15:48:47] 2025-11-26 14:48:47,236 [wrapper] Test setup, not cleaning
[2025-11-26 15:48:47] 2025-11-26 14:48:47,238 [wrapper] apfmon messages muted
[2025-11-26 15:48:47] 2025-11-26 14:48:47,240 [wrapper] ==== wrapper stdout END ====
[2025-11-26 15:48:47] 2025-11-26 14:48:47,243 [wrapper] ==== wrapper stderr END ====
[2025-11-26 15:48:47]  *** Error codes and diagnostics ***
[2025-11-26 15:48:47]     "exeErrorCode": 0,
[2025-11-26 15:48:47]     "exeErrorDiag": "",
[2025-11-26 15:48:47]     "pilotErrorCode": 0,
[2025-11-26 15:48:47]     "pilotErrorDiag": "",
[2025-11-26 15:48:47]  *** Listing of results directory ***
[2025-11-26 15:48:47] total 1311760
[2025-11-26 15:48:47] -rwx------ 1 boinc boinc     36292 Nov 22 11:57 runpilot2-wrapper.sh
[2025-11-26 15:48:47] -rw-r--r-- 1 boinc boinc      5112 Nov 22 11:57 queuedata.json
[2025-11-26 15:48:47] -rw-r--r-- 1 boinc boinc    576529 Nov 22 11:57 pilot3.tar.gz
[2025-11-26 15:48:47] -rw-r--r-- 1 boinc boinc       100 Nov 26 07:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 15:48:47] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 07:47 run_atlas
[2025-11-26 15:48:47] -rw-r--r-- 1 boinc boinc       105 Nov 26 07:47 job.xml
[2025-11-26 15:48:47] -rw-r--r-- 2 boinc boinc 410917963 Nov 26 07:47 EVNT.47483658._001085.pool.root.1
[2025-11-26 15:48:47] drwxrwx--x 2 boinc boinc      4096 Nov 26 07:47 shared
[2025-11-26 15:48:47] -rw-r--r-- 2 boinc boinc    590100 Nov 26 07:47 input.tar.gz
[2025-11-26 15:48:47] -rw-r--r-- 2 boinc boinc     15847 Nov 26 07:47 start_atlas.sh
[2025-11-26 15:48:47] -rw-r--r-- 1 boinc boinc         0 Nov 26 07:47 boinc_setup_complete
[2025-11-26 15:48:47] -rw-r--r-- 1 boinc boinc      6442 Nov 26 07:47 init_data.xml
[2025-11-26 15:48:47] -rw-r--r-- 1 boinc boinc         0 Nov 26 07:47 boinc_lockfile
[2025-11-26 15:48:47] -rw-r--r-- 1 boinc boinc      2785 Nov 26 07:47 pandaJob.out
[2025-11-26 15:48:47] -rw------- 1 boinc boinc    991877 Nov 26 07:47 agis_schedconf.cvmfs.json
[2025-11-26 15:48:47] drwx------ 5 boinc boinc      4096 Nov 26 07:47 pilot3
[2025-11-26 15:48:47] -rw-r--r-- 1 boinc boinc       531 Nov 26 15:44 boinc_task_state.xml
[2025-11-26 15:48:47] -rw------- 1 boinc boinc 917977295 Nov 26 15:47 HITS.47556149._000720.pool.root.1
[2025-11-26 15:48:47] -rw------- 1 boinc boinc        95 Nov 26 15:47 pilot_heartbeat.json
[2025-11-26 15:48:47] -rw------- 1 boinc boinc      1024 Nov 26 15:47 memory_monitor_summary.json
[2025-11-26 15:48:47] -rw------- 1 boinc boinc   1516240 Nov 26 15:47 agis_ddmendpoints.agis.ALL.json
[2025-11-26 15:48:47] -rw------- 1 boinc boinc   1165560 Nov 26 15:47 log.47556149._000720.job.log.tgz.1
[2025-11-26 15:48:47] -rw------- 1 boinc boinc      8571 Nov 26 15:47 heartbeat.json
[2025-11-26 15:48:47] -rw-r--r-- 1 boinc boinc      8192 Nov 26 15:48 boinc_mmap_file
[2025-11-26 15:48:47] -rw-r--r-- 1 boinc boinc        28 Nov 26 15:48 wrapper_checkpoint.txt
[2025-11-26 15:48:47] -rw------- 1 boinc boinc      4752 Nov 26 15:48 pilotlog.txt
[2025-11-26 15:48:47] -rw------- 1 boinc boinc   4058130 Nov 26 15:48 log.47556149._000720.job.log.1
[2025-11-26 15:48:47] -rw------- 1 boinc boinc       353 Nov 26 15:48 output.list
[2025-11-26 15:48:47] -rw-r--r-- 1 boinc boinc       620 Nov 26 15:48 runtime_log
[2025-11-26 15:48:47] -rw------- 1 boinc boinc   5242880 Nov 26 15:48 result.tar.gz
[2025-11-26 15:48:47] -rw-r--r-- 1 boinc boinc      8903 Nov 26 15:48 runtime_log.err
[2025-11-26 15:48:47] -rw------- 1 boinc boinc       666 Nov 26 15:48 XQTMDmWU0g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmH5HKDmW8nKxm.diag
[2025-11-26 15:48:47] -rw-r--r-- 1 boinc boinc      8098 Nov 26 15:48 stderr.txt
[2025-11-26 15:48:47] HITS file was successfully produced:
[2025-11-26 15:48:47] -rw------- 1 boinc boinc 917977295 Nov 26 15:47 shared/HITS.pool.root.1
[2025-11-26 15:48:47]  *** Contents of shared directory: ***
[2025-11-26 15:48:47] total 1303476
[2025-11-26 15:48:47] -rw-r--r-- 2 boinc boinc 410917963 Nov 26 07:47 ATLAS.root_0
[2025-11-26 15:48:47] -rw-r--r-- 2 boinc boinc    590100 Nov 26 07:47 input.tar.gz
[2025-11-26 15:48:47] -rw-r--r-- 2 boinc boinc     15847 Nov 26 07:47 start_atlas.sh
[2025-11-26 15:48:47] -rw------- 1 boinc boinc 917977295 Nov 26 15:47 HITS.pool.root.1
[2025-11-26 15:48:47] -rw------- 1 boinc boinc   5242880 Nov 26 15:48 result.tar.gz
15:48:48 (1197531): run_atlas exited; CPU time 85129.159900
15:48:48 (1197531): called boinc_finish(0)

</stderr_txt>
]]>

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