Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
21:41:48 (457863): wrapper (7.7.26015): starting
21:41:48 (457863): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 21:41:48] Arguments: --nthreads 12
[2025-11-23 21:41:48] Threads: 12
[2025-11-23 21:41:48] Checking for CVMFS
[2025-11-23 21:41:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 21:41:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 21:41:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 21:41:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 21:41:49] 2.13.0.0 371123 476 68884 153220 0 81 4081535 6144000 0 130560 0 292113 99.982 18634 1293 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-23 21:41:49] CVMFS is ok
[2025-11-23 21:41:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 21:41:49] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-23 21:41:49] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-23 21:41:49] Further information can be found at the LHC@home message board.
[2025-11-23 21:41:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 21:41:49] Checking for apptainer binary...
[2025-11-23 21:41:49] apptainer is not installed, using version from CVMFS
[2025-11-23 21:41:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 21:41:49] Debian-bookworm-latest-amd64-base
[2025-11-23 21:41:49] apptainer works
[2025-11-23 21:41:49] Set ATHENA_PROC_NUMBER=12
[2025-11-23 21:41:49] Set ATHENA_CORE_NUMBER=12
[2025-11-23 21:41:49] Starting ATLAS job with PandaID=6895339651
[2025-11-23 21:41:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 01:42:24]  *** The last 200 lines of the pilot log: ***
[2025-11-24 01:42:24] 2025-11-24 00:41:36,502 | INFO     | time since job start (14382s) is within the limit (172800.0s)
[2025-11-24 01:42:24] 2025-11-24 00:41:36,720 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 01:42:24] 2025-11-24 00:41:36,721 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3589.3762500000003
[2025-11-24 01:42:24] 2025-11-24 00:41:36,723 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6895339651/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 01:42:24] 2025-11-24 00:41:36,723 | INFO     | extracted standard info from prmon json
[2025-11-24 01:42:24] 2025-11-24 00:41:36,723 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 01:42:24] 2025-11-24 00:41:36,723 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 01:42:24] 2025-11-24 00:41:36,725 | INFO     | fitting pss+swap vs Time
[2025-11-24 01:42:24] 2025-11-24 00:41:36,725 | INFO     | sum of square deviations: 4075771214.389817
[2025-11-24 01:42:24] 2025-11-24 00:41:36,726 | INFO     | sum of deviations: 165380108713.23737
[2025-11-24 01:42:24] 2025-11-24 00:41:36,726 | INFO     | mean x: 1763937700.5508475
[2025-11-24 01:42:24] 2025-11-24 00:41:36,726 | INFO     | mean y: 3604365.813559322
[2025-11-24 01:42:24] 2025-11-24 00:41:36,726 | INFO     | intersect: -71570631118.8812
[2025-11-24 01:42:24] 2025-11-24 00:41:36,726 | INFO     | chi2: 3.7899430686464446
[2025-11-24 01:42:24] 2025-11-24 00:41:36,726 | INFO     | sum of square deviations: 3822170119.376622
[2025-11-24 01:42:24] 2025-11-24 00:41:36,727 | INFO     | sum of deviations: 228204450640.16885
[2025-11-24 01:42:24] 2025-11-24 00:41:36,727 | INFO     | mean x: 1763937548.051948
[2025-11-24 01:42:24] 2025-11-24 00:41:36,727 | INFO     | mean y: 3641806.069264069
[2025-11-24 01:42:24] 2025-11-24 00:41:36,727 | INFO     | intersect: -105313072663.56647
[2025-11-24 01:42:24] 2025-11-24 00:41:36,727 | INFO     | chi2: 1.798725453582872
[2025-11-24 01:42:24] 2025-11-24 00:41:36,727 | INFO     | current chi2=1.798725453582872 (change=52.5395125730668 %)
[2025-11-24 01:42:24] 2025-11-24 00:41:36,727 | INFO     | sum of square deviations: 3579313411.862839
[2025-11-24 01:42:24] 2025-11-24 00:41:36,728 | INFO     | sum of deviations: 217270760640.7301
[2025-11-24 01:42:24] 2025-11-24 00:41:36,728 | INFO     | mean x: 1763937395.5530972
[2025-11-24 01:42:24] 2025-11-24 00:41:36,728 | INFO     | mean y: 3634939.3141592923
[2025-11-24 01:42:24] 2025-11-24 00:41:36,728 | INFO     | intersect: -107070536991.04716
[2025-11-24 01:42:24] 2025-11-24 00:41:36,728 | INFO     | chi2: 1.7986741814967429
[2025-11-24 01:42:24] 2025-11-24 00:41:36,728 | INFO     | current chi2=1.7986741814967429 (change=0.0028504675923208497 %)
[2025-11-24 01:42:24] 2025-11-24 00:41:36,728 | INFO     | right removable region: 225
[2025-11-24 01:42:24] 2025-11-24 00:41:36,728 | INFO     | sum of square deviations: 3822162799.376622
[2025-11-24 01:42:24] 2025-11-24 00:41:36,729 | INFO     | sum of deviations: 98108983690.85709
[2025-11-24 01:42:24] 2025-11-24 00:41:36,729 | INFO     | mean x: 1763937853.051948
[2025-11-24 01:42:24] 2025-11-24 00:41:36,729 | INFO     | mean y: 3644530.4285714286
[2025-11-24 01:42:24] 2025-11-24 00:41:36,729 | INFO     | intersect: -45273900969.46066
[2025-11-24 01:42:24] 2025-11-24 00:41:36,729 | INFO     | chi2: 2.060814393760918
[2025-11-24 01:42:24] 2025-11-24 00:41:36,729 | INFO     | current chi2=2.060814393760918 (change=45.6241332274966 %)
[2025-11-24 01:42:24] 2025-11-24 00:41:36,730 | INFO     | sum of square deviations: 3579298771.862839
[2025-11-24 01:42:24] 2025-11-24 00:41:36,730 | INFO     | sum of deviations: 84627799322.30093
[2025-11-24 01:42:24] 2025-11-24 00:41:36,730 | INFO     | mean x: 1763938005.5530972
[2025-11-24 01:42:24] 2025-11-24 00:41:36,730 | INFO     | mean y: 3652981.1415929203
[2025-11-24 01:42:24] 2025-11-24 00:41:36,730 | INFO     | intersect: -41702334997.401955
[2025-11-24 01:42:24] 2025-11-24 00:41:36,730 | INFO     | chi2: 2.050763303375106
[2025-11-24 01:42:24] 2025-11-24 00:41:36,730 | INFO     | current chi2=2.050763303375106 (change=0.48772419370912257 %)
[2025-11-24 01:42:24] 2025-11-24 00:41:36,730 | INFO     | left removable region: 20
[2025-11-24 01:42:24] 2025-11-24 00:41:36,731 | INFO     | sum of square deviations: 2671366201.297566
[2025-11-24 01:42:24] 2025-11-24 00:41:36,731 | INFO     | sum of deviations: 117021344872.74144
[2025-11-24 01:42:24] 2025-11-24 00:41:36,731 | INFO     | mean x: 1763937975.0585365
[2025-11-24 01:42:24] 2025-11-24 00:41:36,731 | INFO     | mean y: 3700020.604878049
[2025-11-24 01:42:24] 2025-11-24 00:41:36,731 | INFO     | intersect: -77267021609.84264
[2025-11-24 01:42:24] 2025-11-24 00:41:36,731 | INFO     | chi2: 0.0171359116672522
[2025-11-24 01:42:24] 2025-11-24 00:41:36,731 | INFO     | current memory leak: 43.81 B/s (using 205 data points, chi2=0.02)
[2025-11-24 01:42:24] 2025-11-24 00:41:36,732 | INFO     | could have reported an average CPU frequency of 3880 MHz (11 samples)
[2025-11-24 01:42:24] 2025-11-24 00:41:36,732 | INFO     | ..............................
[2025-11-24 01:42:24] 2025-11-24 00:41:36,732 | INFO     | . Timing measurements:
[2025-11-24 01:42:24] 2025-11-24 00:41:36,732 | INFO     | . get job = 0 s
[2025-11-24 01:42:24] 2025-11-24 00:41:36,732 | INFO     | . initial setup = 1 s
[2025-11-24 01:42:24] 2025-11-24 00:41:36,732 | INFO     | . payload setup = 2 s
[2025-11-24 01:42:24] 2025-11-24 00:41:36,732 | INFO     | . stage-in = 0 s
[2025-11-24 01:42:24] 2025-11-24 00:41:36,732 | INFO     | . payload execution = 14353 s
[2025-11-24 01:42:24] 2025-11-24 00:41:36,732 | INFO     | . stage-out = 1 s
[2025-11-24 01:42:24] 2025-11-24 00:41:36,732 | INFO     | . log creation = 0 s
[2025-11-24 01:42:24] 2025-11-24 00:41:36,732 | INFO     | ..............................
[2025-11-24 01:42:24] 2025-11-24 00:41:36,784 | INFO     | 
[2025-11-24 01:42:24] 2025-11-24 00:41:36,784 | INFO     | job summary report
[2025-11-24 01:42:24] 2025-11-24 00:41:36,784 | INFO     | --------------------------------------------------
[2025-11-24 01:42:24] 2025-11-24 00:41:36,784 | INFO     | PanDA job id: 6895339651
[2025-11-24 01:42:24] 2025-11-24 00:41:36,784 | INFO     | task id: 47556137
[2025-11-24 01:42:24] 2025-11-24 00:41:36,784 | INFO     | errors: (none)
[2025-11-24 01:42:24] 2025-11-24 00:41:36,784 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 01:42:24] 2025-11-24 00:41:36,784 | INFO     | pilot state: finished 
[2025-11-24 01:42:24] 2025-11-24 00:41:36,784 | INFO     | transexitcode: 0
[2025-11-24 01:42:24] 2025-11-24 00:41:36,784 | INFO     | exeerrorcode: 0
[2025-11-24 01:42:24] 2025-11-24 00:41:36,784 | INFO     | exeerrordiag: 
[2025-11-24 01:42:24] 2025-11-24 00:41:36,785 | INFO     | exitcode: 0
[2025-11-24 01:42:24] 2025-11-24 00:41:36,785 | INFO     | exitmsg: OK
[2025-11-24 01:42:24] 2025-11-24 00:41:36,785 | INFO     | cpuconsumptiontime: 166283 s
[2025-11-24 01:42:24] 2025-11-24 00:41:36,785 | INFO     | nevents: 1000
[2025-11-24 01:42:24] 2025-11-24 00:41:36,785 | INFO     | neventsw: 0
[2025-11-24 01:42:24] 2025-11-24 00:41:36,785 | INFO     | pid: 468465
[2025-11-24 01:42:24] 2025-11-24 00:41:36,785 | INFO     | pgrp: 468465
[2025-11-24 01:42:24] 2025-11-24 00:41:36,785 | INFO     | corecount: 12
[2025-11-24 01:42:24] 2025-11-24 00:41:36,785 | INFO     | event service: False
[2025-11-24 01:42:24] 2025-11-24 00:41:36,785 | INFO     | sizes: {0: 2298592, 1: 2298791, 3: 2299053, 11: 2299081, 14360: 2331007, 14361: 2331006, 14362: 2340254, 14369: 2340444}
[2025-11-24 01:42:24] 2025-11-24 00:41:36,785 | INFO     | --------------------------------------------------
[2025-11-24 01:42:24] 2025-11-24 00:41:36,785 | INFO     | 
[2025-11-24 01:42:24] 2025-11-24 00:41:36,785 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-11-24 01:42:24] 2025-11-24 00:41:36,798 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 01:42:24] 2025-11-24 00:41:36,799 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 01:42:24] 2025-11-24 00:41:36,799 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 01:42:24] 2025-11-24 00:41:36,799 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 01:42:24] 2025-11-24 00:41:36,799 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 01:42:24] 2025-11-24 00:41:36,799 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 01:42:24] 2025-11-24 00:41:36,799 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 01:42:24] 2025-11-24 00:41:36,799 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 01:42:24] 2025-11-24 00:41:36,799 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 01:42:24] 2025-11-24 00:41:36,799 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 01:42:24] 2025-11-24 00:41:36,799 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 01:42:24] 2025-11-24 00:41:36,799 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 01:42:24] 2025-11-24 00:41:36,799 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 01:42:24] 2025-11-24 00:41:36,799 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 01:42:24] 2025-11-24 00:41:36,799 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 01:42:24] 2025-11-24 00:41:36,799 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 01:42:24] 2025-11-24 00:41:36,799 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 01:42:24] 2025-11-24 00:41:36,799 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 01:42:24] 2025-11-24 00:41:36,799 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 01:42:24] 2025-11-24 00:41:36,799 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 01:42:24] 2025-11-24 00:41:36,799 | INFO     | job 6895339651 has completed (purged errors)
[2025-11-24 01:42:24] 2025-11-24 00:41:36,799 | INFO     | overall cleanup function is called
[2025-11-24 01:42:24] 2025-11-24 00:41:37,594 | INFO     | PID=461704 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-24 01:42:24] 2025-11-24 00:41:37,812 | INFO     | --- collectZombieJob: --- 10, [468465]
[2025-11-24 01:42:24] 2025-11-24 00:41:37,812 | INFO     | zombie collector waiting for pid 468465
[2025-11-24 01:42:24] 2025-11-24 00:41:37,812 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 01:42:24] 2025-11-24 00:41:37,812 | INFO     | collected zombie processes
[2025-11-24 01:42:24] 2025-11-24 00:41:37,812 | INFO     | will attempt to kill all subprocesses of pid=468465
[2025-11-24 01:42:24] 2025-11-24 00:41:37,871 | INFO     | process IDs to be killed: [468465] (in reverse order)
[2025-11-24 01:42:24] 2025-11-24 00:41:37,897 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 01:42:24] 2025-11-24 00:41:37,897 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 01:42:24] 2025-11-24 00:41:37,898 | INFO     | did not find any defunct processes belonging to 468465
[2025-11-24 01:42:24] 2025-11-24 00:41:37,900 | INFO     | did not find any defunct processes belonging to 468465
[2025-11-24 01:42:24] 2025-11-24 00:41:37,901 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 01:42:24] 2025-11-24 00:41:37,901 | INFO     | ready for new job
[2025-11-24 01:42:24] 2025-11-24 00:41:37,901 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 01:42:24] 2025-11-24 00:41:37,902 | INFO     | ***************************************
[2025-11-24 01:42:24] 2025-11-24 00:41:37,902 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 01:42:24] 2025-11-24 00:41:37,902 | INFO     | ***************************************
[2025-11-24 01:42:24] 2025-11-24 00:41:37,903 | INFO     | 
[2025-11-24 01:42:24] 2025-11-24 00:41:37,903 | INFO     | architecture information:
[2025-11-24 01:42:24] 2025-11-24 00:41:37,903 | INFO     | executing command: cat /etc/os-release
[2025-11-24 01:42:24] 2025-11-24 00:41:37,913 | INFO     | cat /etc/os-release:
[2025-11-24 01:42:24] NAME="CentOS Linux"
[2025-11-24 01:42:24] VERSION="7 (Core)"
[2025-11-24 01:42:24] ID="centos"
[2025-11-24 01:42:24] ID_LIKE="rhel fedora"
[2025-11-24 01:42:24] VERSION_ID="7"
[2025-11-24 01:42:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 01:42:24] ANSI_COLOR="0;31"
[2025-11-24 01:42:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 01:42:24] HOME_URL="https://www.centos.org/"
[2025-11-24 01:42:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 01:42:24] 
[2025-11-24 01:42:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 01:42:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 01:42:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 01:42:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 01:42:24] 
[2025-11-24 01:42:24] 2025-11-24 00:41:37,913 | INFO     | ***************************************
[2025-11-24 01:42:24] 2025-11-24 00:41:38,416 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-11-24 01:42:24] 2025-11-24 00:41:38,430 | INFO     | sufficient remaining disk space (760739790848 B)
[2025-11-24 01:42:24] 2025-11-24 00:41:38,431 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 01:42:24] 2025-11-24 00:41:38,431 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 01:42:24] 2025-11-24 00:41:38,431 | INFO     | update_server=False
[2025-11-24 01:42:24] 2025-11-24 00:41:38,431 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 01:42:24] 2025-11-24 00:41:38,431 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-24 01:42:24] 2025-11-24 00:41:38,431 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 01:42:24] 2025-11-24 00:41:38,431 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 01:42:24] 2025-11-24 00:41:38,431 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 01:42:24] 2025-11-24 00:41:38,431 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 01:42:24] 2025-11-24 00:41:38,431 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 01:42:24] 2025-11-24 00:41:38,457 | INFO     | all job control threads have been joined
[2025-11-24 01:42:24] 2025-11-24 00:41:38,706 | INFO     | all payload control threads have been joined
[2025-11-24 01:42:24] 2025-11-24 00:41:38,869 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 01:42:24] 2025-11-24 00:41:38,869 | INFO     | aborting loop
[2025-11-24 01:42:24] 2025-11-24 00:41:39,436 | INFO     | [job] retrieve thread has finished
[2025-11-24 01:42:24] 2025-11-24 00:41:39,436 | INFO     | [job] queue monitor thread has finished
[2025-11-24 01:42:24] 2025-11-24 00:41:39,460 | INFO     | [job] control thread has finished
[2025-11-24 01:42:24] 2025-11-24 00:41:39,485 | INFO     | all data control threads have been joined
[2025-11-24 01:42:24] 2025-11-24 00:41:39,600 | INFO     | [data] copytool_in thread has finished
[2025-11-24 01:42:24] 2025-11-24 00:41:39,709 | INFO     | [payload] control thread has finished
[2025-11-24 01:42:24] 2025-11-24 00:41:39,874 | INFO     | [job] job monitor thread has finished
[2025-11-24 01:42:24] 2025-11-24 00:41:40,253 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 01:42:24] 2025-11-24 00:41:40,257 | INFO     | [payload] validate_post thread has finished
[2025-11-24 01:42:24] 2025-11-24 00:41:40,293 | INFO     | [job] validate thread has finished
[2025-11-24 01:42:24] 2025-11-24 00:41:40,433 | INFO     | [data] copytool_out thread has finished
[2025-11-24 01:42:24] 2025-11-24 00:41:40,489 | INFO     | [data] control thread has finished
[2025-11-24 01:42:24] 2025-11-24 00:41:40,557 | INFO     | [payload] failed_post thread has finished
[2025-11-24 01:42:24] 2025-11-24 00:41:40,598 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 01:42:24] 2025-11-24 00:41:40,657 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 01:42:24] 2025-11-24 00:41:40,677 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 01:42:24] 2025-11-24 00:41:44,259 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 01:42:24] 2025-11-24 00:41:49,290 | INFO     | job.realtimelogging is not enabled
[2025-11-24 01:42:24] 2025-11-24 00:41:50,296 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 01:42:24] 2025-11-24 00:41:53,933 [wrapper] supervise_pilot (15 min periods counter: 17)
[2025-11-24 01:42:24] 2025-11-24 00:42:18,491 | INFO     | [monitor] cgroup control has ended
[2025-11-24 01:42:24] 2025-11-24 00:42:19,626 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140172296972096)>', '<ExcThread(monitor, started 140171609626368)>']
[2025-11-24 01:42:24] 2025-11-24 00:42:20,584 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 01:42:24] 2025-11-24 00:42:20,584 | INFO     | [monitor] control thread has ended
[2025-11-24 01:42:24] 2025-11-24 00:42:24,637 | INFO     | all workflow threads have been joined
[2025-11-24 01:42:24] 2025-11-24 00:42:24,637 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 01:42:24] 2025-11-24 00:42:24,637 | INFO     | traces error code: 0
[2025-11-24 01:42:24] 2025-11-24 00:42:24,637 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 01:42:24] 2025-11-24 00:42:24,707 [wrapper] ==== pilot stdout END ====
[2025-11-24 01:42:24] 2025-11-24 00:42:24,708 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 01:42:24] 2025-11-24 00:42:24,709 [wrapper] pilotpid: 461704
[2025-11-24 01:42:24] 2025-11-24 00:42:24,711 [wrapper] Pilot exit status: 0
[2025-11-24 01:42:24] 2025-11-24 00:42:24,715 [wrapper] pandaids: 6895339651
[2025-11-24 01:42:24] 2025-11-24 00:42:24,729 [wrapper] cleanup supervisor_pilot  501143 461705
[2025-11-24 01:42:24] 2025-11-24 00:42:24,731 [wrapper] Test setup, not cleaning
[2025-11-24 01:42:24] 2025-11-24 00:42:24,732 [wrapper] apfmon messages muted
[2025-11-24 01:42:24] 2025-11-24 00:42:24,733 [wrapper] ==== wrapper stdout END ====
[2025-11-24 01:42:24] 2025-11-24 00:42:24,734 [wrapper] ==== wrapper stderr END ====
[2025-11-24 01:42:24]  *** Error codes and diagnostics ***
[2025-11-24 01:42:24]     "exeErrorCode": 0,
[2025-11-24 01:42:24]     "exeErrorDiag": "",
[2025-11-24 01:42:24]     "pilotErrorCode": 0,
[2025-11-24 01:42:24]     "pilotErrorDiag": "",
[2025-11-24 01:42:24]  *** Listing of results directory ***
[2025-11-24 01:42:24] total 1293796
[2025-11-24 01:42:24] -rw-r--r-- 1 boinc boinc    576529 Nov 22 11:57 pilot3.tar.gz
[2025-11-24 01:42:24] -rw-r--r-- 1 boinc boinc      5112 Nov 22 12:04 queuedata.json
[2025-11-24 01:42:24] -rwx------ 1 boinc boinc     36292 Nov 22 12:05 runpilot2-wrapper.sh
[2025-11-24 01:42:24] -rw-r--r-- 1 boinc boinc       100 Nov 23 21:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 01:42:24] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 21:41 run_atlas
[2025-11-24 01:42:24] -rw-r--r-- 1 boinc boinc       105 Nov 23 21:41 job.xml
[2025-11-24 01:42:24] -rw-r--r-- 2 boinc boinc     15847 Nov 23 21:41 start_atlas.sh
[2025-11-24 01:42:24] drwxrwx--x 2 boinc boinc      4096 Nov 23 21:41 shared
[2025-11-24 01:42:24] -rw-r--r-- 2 boinc boinc    590101 Nov 23 21:41 input.tar.gz
[2025-11-24 01:42:24] -rw-r--r-- 1 boinc boinc      6727 Nov 23 21:41 init_data.xml
[2025-11-24 01:42:24] -rw-r--r-- 2 boinc boinc 408382281 Nov 23 21:41 EVNT.47483658._000354.pool.root.1
[2025-11-24 01:42:24] -rw-r--r-- 1 boinc boinc         0 Nov 23 21:41 boinc_lockfile
[2025-11-24 01:42:24] -rw-r--r-- 1 boinc boinc      2785 Nov 23 21:41 pandaJob.out
[2025-11-24 01:42:24] -rw------- 1 boinc boinc    989786 Nov 23 21:41 agis_schedconf.cvmfs.json
[2025-11-24 01:42:24] drwx------ 5 boinc boinc      4096 Nov 23 21:41 pilot3
[2025-11-24 01:42:24] -rw-r--r-- 1 boinc boinc       532 Nov 24 01:37 boinc_task_state.xml
[2025-11-24 01:42:24] -rw------- 1 boinc boinc        95 Nov 24 01:40 pilot_heartbeat.json
[2025-11-24 01:42:24] -rw------- 1 boinc boinc 904509269 Nov 24 01:41 HITS.47556137._003508.pool.root.1
[2025-11-24 01:42:24] -rw------- 1 boinc boinc      1028 Nov 24 01:41 memory_monitor_summary.json
[2025-11-24 01:42:24] -rw------- 1 boinc boinc   1526164 Nov 24 01:41 agis_ddmendpoints.agis.ALL.json
[2025-11-24 01:42:24] -rw------- 1 boinc boinc   1969338 Nov 24 01:41 log.47556137._003508.job.log.tgz.1
[2025-11-24 01:42:24] -rw------- 1 boinc boinc      8604 Nov 24 01:41 heartbeat.json
[2025-11-24 01:42:24] -rw-r--r-- 1 boinc boinc      8192 Nov 24 01:42 boinc_mmap_file
[2025-11-24 01:42:24] -rw-r--r-- 1 boinc boinc        29 Nov 24 01:42 wrapper_checkpoint.txt
[2025-11-24 01:42:24] -rw------- 1 boinc boinc      4632 Nov 24 01:42 pilotlog.txt
[2025-11-24 01:42:24] -rw------- 1 boinc boinc   2049707 Nov 24 01:42 log.47556137._003508.job.log.1
[2025-11-24 01:42:24] -rw------- 1 boinc boinc       353 Nov 24 01:42 output.list
[2025-11-24 01:42:24] -rw-r--r-- 1 boinc boinc       620 Nov 24 01:42 runtime_log
[2025-11-24 01:42:24] -rw------- 1 boinc boinc   4034560 Nov 24 01:42 result.tar.gz
[2025-11-24 01:42:24] -rw------- 1 boinc boinc       714 Nov 24 01:42 ywJODmQc0g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmQ5HKDmfd5kOm.diag
[2025-11-24 01:42:24] -rw-r--r-- 1 boinc boinc      9133 Nov 24 01:42 runtime_log.err
[2025-11-24 01:42:24] -rw-r--r-- 1 boinc boinc     21428 Nov 24 01:42 stderr.txt
[2025-11-24 01:42:24] HITS file was successfully produced:
[2025-11-24 01:42:24] -rw------- 1 boinc boinc 904509269 Nov 24 01:41 shared/HITS.pool.root.1
[2025-11-24 01:42:24]  *** Contents of shared directory: ***
[2025-11-24 01:42:24] total 1286668
[2025-11-24 01:42:24] -rw-r--r-- 2 boinc boinc     15847 Nov 23 21:41 start_atlas.sh
[2025-11-24 01:42:24] -rw-r--r-- 2 boinc boinc    590101 Nov 23 21:41 input.tar.gz
[2025-11-24 01:42:24] -rw-r--r-- 2 boinc boinc 408382281 Nov 23 21:41 ATLAS.root_0
[2025-11-24 01:42:24] -rw------- 1 boinc boinc 904509269 Nov 24 01:41 HITS.pool.root.1
[2025-11-24 01:42:24] -rw------- 1 boinc boinc   4034560 Nov 24 01:42 result.tar.gz
01:42:26 (457863): run_atlas exited; CPU time 166132.663341
01:42:26 (457863): called boinc_finish(0)

</stderr_txt>
]]>

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