Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:24:56 (1971091): wrapper (7.7.26015): starting
14:24:56 (1971091): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 14:24:56] Arguments: --nthreads 12
[2025-11-25 14:24:56] Threads: 12
[2025-11-25 14:24:56] Checking for CVMFS
[2025-11-25 14:24:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 14:24:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 14:24:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 14:24:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 14:24:57] 2.13.3.0 11850 5673 82440 153284 0 90 3669377 4097025 923 130560 0 4515302 99.991 192563 22339 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-25 14:24:57] CVMFS is ok
[2025-11-25 14:24:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 14:24:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 14:24:57] Further information can be found at the LHC@home message board.
[2025-11-25 14:24:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 14:24:57] Checking for apptainer binary...
[2025-11-25 14:24:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 14:24:57] Running /usr/bin/apptainer --version
[2025-11-25 14:24:57] apptainer version 1.4.4-1.el9
[2025-11-25 14:24:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 14:24:57] pckelar1.cern.ch
[2025-11-25 14:24:57] apptainer works
[2025-11-25 14:24:57] Set ATHENA_PROC_NUMBER=12
[2025-11-25 14:24:57] Set ATHENA_CORE_NUMBER=12
[2025-11-25 14:24:57] Starting ATLAS job with PandaID=6895351225
[2025-11-25 14:24:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 02:12:24]  *** The last 200 lines of the pilot log: ***
[2025-11-26 02:12:24] 2025-11-26 01:11:30,952 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:12:24] 2025-11-26 01:11:32,012 | INFO     | time since job start (42385s) is within the limit (172800.0s)
[2025-11-26 02:12:24] 2025-11-26 01:11:32,012 | INFO     | 42385s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-26 02:12:24] 2025-11-26 01:11:32,512 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 02:12:24] 2025-11-26 01:11:32,516 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2833.6508333333336
[2025-11-26 02:12:24] 2025-11-26 01:11:32,518 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6895351225/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 02:12:24] 2025-11-26 01:11:32,519 | INFO     | extracted standard info from prmon json
[2025-11-26 02:12:24] 2025-11-26 01:11:32,519 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 02:12:24] 2025-11-26 01:11:32,519 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 02:12:24] 2025-11-26 01:11:32,528 | INFO     | fitting pss+swap vs Time
[2025-11-26 02:12:24] 2025-11-26 01:11:32,529 | INFO     | sum of square deviations: 104094731294.13522
[2025-11-26 02:12:24] 2025-11-26 01:11:32,537 | INFO     | sum of deviations: 1554476864685.65
[2025-11-26 02:12:24] 2025-11-26 01:11:32,537 | INFO     | mean x: 1764098303.4517987
[2025-11-26 02:12:24] 2025-11-26 01:11:32,538 | INFO     | mean y: 3563888.4820143883
[2025-11-26 02:12:24] 2025-11-26 01:11:32,538 | INFO     | intersect: -26340228594.140274
[2025-11-26 02:12:24] 2025-11-26 01:11:32,538 | INFO     | chi2: 5.180460806099182
[2025-11-26 02:12:24] 2025-11-26 01:11:32,539 | INFO     | sum of square deviations: 101864282915.60797
[2025-11-26 02:12:24] 2025-11-26 01:11:32,548 | INFO     | sum of deviations: 1819442942036.9858
[2025-11-26 02:12:24] 2025-11-26 01:11:32,548 | INFO     | mean x: 1764098150.9550724
[2025-11-26 02:12:24] 2025-11-26 01:11:32,548 | INFO     | mean y: 3581984.2898550723
[2025-11-26 02:12:24] 2025-11-26 01:11:32,549 | INFO     | intersect: -31505754143.613197
[2025-11-26 02:12:24] 2025-11-26 01:11:32,549 | INFO     | chi2: 2.2848398104478997
[2025-11-26 02:12:24] 2025-11-26 01:11:32,550 | INFO     | current chi2=2.2848398104478997 (change=55.895046870003185 %)
[2025-11-26 02:12:24] 2025-11-26 01:11:32,550 | INFO     | sum of square deviations: 99665886315.97966
[2025-11-26 02:12:24] 2025-11-26 01:11:32,559 | INFO     | sum of deviations: 1828514479030.6482
[2025-11-26 02:12:24] 2025-11-26 01:11:32,559 | INFO     | mean x: 1764097998.4569342
[2025-11-26 02:12:24] 2025-11-26 01:11:32,559 | INFO     | mean y: 3582603.3270072993
[2025-11-26 02:12:24] 2025-11-26 01:11:32,559 | INFO     | intersect: -32361340359.188305
[2025-11-26 02:12:24] 2025-11-26 01:11:32,559 | INFO     | chi2: 2.179342360756534
[2025-11-26 02:12:24] 2025-11-26 01:11:32,560 | INFO     | current chi2=2.179342360756534 (change=4.617279916471906 %)
[2025-11-26 02:12:24] 2025-11-26 01:11:32,560 | INFO     | right removable region: 684
[2025-11-26 02:12:24] 2025-11-26 01:11:32,560 | INFO     | sum of square deviations: 101864091375.60806
[2025-11-26 02:12:24] 2025-11-26 01:11:32,569 | INFO     | sum of deviations: 1333904020136.747
[2025-11-26 02:12:24] 2025-11-26 01:11:32,569 | INFO     | mean x: 1764098455.9550724
[2025-11-26 02:12:24] 2025-11-26 01:11:32,569 | INFO     | mean y: 3578938.4434782607
[2025-11-26 02:12:24] 2025-11-26 01:11:32,569 | INFO     | intersect: -23097181992.498
[2025-11-26 02:12:24] 2025-11-26 01:11:32,569 | INFO     | chi2: 3.196592380436142
[2025-11-26 02:12:24] 2025-11-26 01:11:32,570 | INFO     | current chi2=3.196592380436142 (change=38.29521156356102 %)
[2025-11-26 02:12:24] 2025-11-26 01:11:32,570 | INFO     | sum of square deviations: 99665629383.89204
[2025-11-26 02:12:24] 2025-11-26 01:11:32,579 | INFO     | sum of deviations: 1254275502631.7812
[2025-11-26 02:12:24] 2025-11-26 01:11:32,579 | INFO     | mean x: 1764098608.4554744
[2025-11-26 02:12:24] 2025-11-26 01:11:32,579 | INFO     | mean y: 3584460.4846715326
[2025-11-26 02:12:24] 2025-11-26 01:11:32,579 | INFO     | intersect: -22197305480.11632
[2025-11-26 02:12:24] 2025-11-26 01:11:32,579 | INFO     | chi2: 3.099651983034338
[2025-11-26 02:12:24] 2025-11-26 01:11:32,580 | INFO     | current chi2=3.099651983034338 (change=3.032616795156642 %)
[2025-11-26 02:12:24] 2025-11-26 01:11:32,580 | INFO     | left removable region: 20
[2025-11-26 02:12:24] 2025-11-26 01:11:32,580 | INFO     | sum of square deviations: 90777575883.90207
[2025-11-26 02:12:24] 2025-11-26 01:11:32,588 | INFO     | sum of deviations: 1418225477849.892
[2025-11-26 02:12:24] 2025-11-26 01:11:32,588 | INFO     | mean x: 1764098577.9593372
[2025-11-26 02:12:24] 2025-11-26 01:11:32,588 | INFO     | mean y: 3611036.6626506024
[2025-11-26 02:12:24] 2025-11-26 01:11:32,588 | INFO     | intersect: -27557045043.209225
[2025-11-26 02:12:24] 2025-11-26 01:11:32,589 | INFO     | chi2: 0.04144679178839152
[2025-11-26 02:12:24] 2025-11-26 01:11:32,589 | INFO     | current memory leak: 15.62 B/s (using 664 data points, chi2=0.04)
[2025-11-26 02:12:24] 2025-11-26 01:11:32,589 | INFO     | could have reported an average CPU frequency of 2804 MHz (27 samples)
[2025-11-26 02:12:24] 2025-11-26 01:11:32,589 | INFO     | ..............................
[2025-11-26 02:12:24] 2025-11-26 01:11:32,589 | INFO     | . Timing measurements:
[2025-11-26 02:12:24] 2025-11-26 01:11:32,589 | INFO     | . get job = 0 s
[2025-11-26 02:12:24] 2025-11-26 01:11:32,589 | INFO     | . initial setup = 1 s
[2025-11-26 02:12:24] 2025-11-26 01:11:32,590 | INFO     | . payload setup = 7 s
[2025-11-26 02:12:24] 2025-11-26 01:11:32,590 | INFO     | . stage-in = 0 s
[2025-11-26 02:12:24] 2025-11-26 01:11:32,590 | INFO     | . payload execution = 42350 s
[2025-11-26 02:12:24] 2025-11-26 01:11:32,590 | INFO     | . stage-out = 1 s
[2025-11-26 02:12:24] 2025-11-26 01:11:32,590 | INFO     | . log creation = 0 s
[2025-11-26 02:12:24] 2025-11-26 01:11:32,590 | INFO     | ..............................
[2025-11-26 02:12:24] 2025-11-26 01:11:32,654 | INFO     | 
[2025-11-26 02:12:24] 2025-11-26 01:11:32,654 | INFO     | job summary report
[2025-11-26 02:12:24] 2025-11-26 01:11:32,654 | INFO     | --------------------------------------------------
[2025-11-26 02:12:24] 2025-11-26 01:11:32,655 | INFO     | PanDA job id: 6895351225
[2025-11-26 02:12:24] 2025-11-26 01:11:32,655 | INFO     | task id: 47556137
[2025-11-26 02:12:24] 2025-11-26 01:11:32,655 | INFO     | errors: (none)
[2025-11-26 02:12:24] 2025-11-26 01:11:32,655 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 02:12:24] 2025-11-26 01:11:32,655 | INFO     | pilot state: finished 
[2025-11-26 02:12:24] 2025-11-26 01:11:32,655 | INFO     | transexitcode: 0
[2025-11-26 02:12:24] 2025-11-26 01:11:32,655 | INFO     | exeerrorcode: 0
[2025-11-26 02:12:24] 2025-11-26 01:11:32,655 | INFO     | exeerrordiag: 
[2025-11-26 02:12:24] 2025-11-26 01:11:32,655 | INFO     | exitcode: 0
[2025-11-26 02:12:24] 2025-11-26 01:11:32,655 | INFO     | exitmsg: OK
[2025-11-26 02:12:24] 2025-11-26 01:11:32,655 | INFO     | cpuconsumptiontime: 495789 s
[2025-11-26 02:12:24] 2025-11-26 01:11:32,655 | INFO     | nevents: 1000
[2025-11-26 02:12:24] 2025-11-26 01:11:32,656 | INFO     | neventsw: 0
[2025-11-26 02:12:24] 2025-11-26 01:11:32,656 | INFO     | pid: 1983157
[2025-11-26 02:12:24] 2025-11-26 01:11:32,656 | INFO     | pgrp: 1983157
[2025-11-26 02:12:24] 2025-11-26 01:11:32,656 | INFO     | corecount: 12
[2025-11-26 02:12:24] 2025-11-26 01:11:32,656 | INFO     | event service: False
[2025-11-26 02:12:24] 2025-11-26 01:11:32,656 | INFO     | sizes: {0: 2284092, 1: 2284291, 6: 2284553, 12: 2284581, 42360: 2329467, 42363: 2338461, 42364: 2338645, 42367: 2338891}
[2025-11-26 02:12:24] 2025-11-26 01:11:32,656 | INFO     | --------------------------------------------------
[2025-11-26 02:12:24] 2025-11-26 01:11:32,656 | INFO     | 
[2025-11-26 02:12:24] 2025-11-26 01:11:32,656 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-11-26 02:12:24] 2025-11-26 01:11:32,675 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 02:12:24] 2025-11-26 01:11:32,675 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 02:12:24] 2025-11-26 01:11:32,675 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 02:12:24] 2025-11-26 01:11:32,675 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 02:12:24] 2025-11-26 01:11:32,675 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 02:12:24] 2025-11-26 01:11:32,675 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 02:12:24] 2025-11-26 01:11:32,675 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 02:12:24] 2025-11-26 01:11:32,676 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 02:12:24] 2025-11-26 01:11:32,676 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 02:12:24] 2025-11-26 01:11:32,676 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 02:12:24] 2025-11-26 01:11:32,676 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 02:12:24] 2025-11-26 01:11:32,676 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 02:12:24] 2025-11-26 01:11:32,676 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 02:12:24] 2025-11-26 01:11:32,676 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 02:12:24] 2025-11-26 01:11:32,676 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 02:12:24] 2025-11-26 01:11:32,676 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 02:12:24] 2025-11-26 01:11:32,676 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 02:12:24] 2025-11-26 01:11:32,676 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 02:12:24] 2025-11-26 01:11:32,677 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 02:12:24] 2025-11-26 01:11:32,677 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 02:12:24] 2025-11-26 01:11:32,677 | INFO     | job 6895351225 has completed (purged errors)
[2025-11-26 02:12:24] 2025-11-26 01:11:32,677 | INFO     | overall cleanup function is called
[2025-11-26 02:12:24] 2025-11-26 01:11:33,692 | INFO     | --- collectZombieJob: --- 10, [1983157]
[2025-11-26 02:12:24] 2025-11-26 01:11:33,692 | INFO     | zombie collector waiting for pid 1983157
[2025-11-26 02:12:24] 2025-11-26 01:11:33,692 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 02:12:24] 2025-11-26 01:11:33,693 | INFO     | collected zombie processes
[2025-11-26 02:12:24] 2025-11-26 01:11:33,693 | INFO     | will attempt to kill all subprocesses of pid=1983157
[2025-11-26 02:12:24] 2025-11-26 01:11:33,799 | INFO     | process IDs to be killed: [1983157] (in reverse order)
[2025-11-26 02:12:24] 2025-11-26 01:11:33,841 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 02:12:24] 2025-11-26 01:11:33,842 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 02:12:24] 2025-11-26 01:11:33,845 | INFO     | did not find any defunct processes belonging to 1983157
[2025-11-26 02:12:24] 2025-11-26 01:11:33,848 | INFO     | did not find any defunct processes belonging to 1983157
[2025-11-26 02:12:24] 2025-11-26 01:11:33,849 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 02:12:24] 2025-11-26 01:11:33,849 | INFO     | ready for new job
[2025-11-26 02:12:24] 2025-11-26 01:11:33,849 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 02:12:24] 2025-11-26 01:11:33,851 | INFO     | ***************************************
[2025-11-26 02:12:24] 2025-11-26 01:11:33,851 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 02:12:24] 2025-11-26 01:11:33,851 | INFO     | ***************************************
[2025-11-26 02:12:24] 2025-11-26 01:11:33,852 | INFO     | 
[2025-11-26 02:12:24] 2025-11-26 01:11:33,852 | INFO     | architecture information:
[2025-11-26 02:12:24] 2025-11-26 01:11:33,853 | INFO     | executing command: cat /etc/os-release
[2025-11-26 02:12:24] 2025-11-26 01:11:33,863 | INFO     | cat /etc/os-release:
[2025-11-26 02:12:24] NAME="CentOS Linux"
[2025-11-26 02:12:24] VERSION="7 (Core)"
[2025-11-26 02:12:24] ID="centos"
[2025-11-26 02:12:24] ID_LIKE="rhel fedora"
[2025-11-26 02:12:24] VERSION_ID="7"
[2025-11-26 02:12:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 02:12:24] ANSI_COLOR="0;31"
[2025-11-26 02:12:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 02:12:24] HOME_URL="https://www.centos.org/"
[2025-11-26 02:12:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 02:12:24] 
[2025-11-26 02:12:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 02:12:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 02:12:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 02:12:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 02:12:24] 
[2025-11-26 02:12:24] 2025-11-26 01:11:33,863 | INFO     | ***************************************
[2025-11-26 02:12:24] 2025-11-26 01:11:34,366 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-11-26 02:12:24] 2025-11-26 01:11:34,380 | INFO     | sufficient remaining disk space (776830189568 B)
[2025-11-26 02:12:24] 2025-11-26 01:11:34,380 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 02:12:24] 2025-11-26 01:11:34,380 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 02:12:24] 2025-11-26 01:11:34,380 | INFO     | update_server=False
[2025-11-26 02:12:24] 2025-11-26 01:11:34,380 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 02:12:24] 2025-11-26 01:11:34,381 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:12:24] 2025-11-26 01:11:34,460 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:12:24] 2025-11-26 01:11:34,461 | INFO     | aborting loop
[2025-11-26 02:12:24] 2025-11-26 01:11:34,719 | INFO     | all payload control threads have been joined
[2025-11-26 02:12:24] 2025-11-26 01:11:34,831 | INFO     | all job control threads have been joined
[2025-11-26 02:12:24] 2025-11-26 01:11:35,199 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 02:12:24] 2025-11-26 01:11:35,381 | INFO     | all data control threads have been joined
[2025-11-26 02:12:24] 2025-11-26 01:11:35,386 | INFO     | [job] retrieve thread has finished
[2025-11-26 02:12:24] 2025-11-26 01:11:35,386 | INFO     | [job] queue monitor thread has finished
[2025-11-26 02:12:24] 2025-11-26 01:11:35,466 | INFO     | [job] job monitor thread has finished
[2025-11-26 02:12:24] 2025-11-26 01:11:35,721 | INFO     | [payload] control thread has finished
[2025-11-26 02:12:24] 2025-11-26 01:11:35,800 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 02:12:24] 2025-11-26 01:11:35,837 | INFO     | [job] control thread has finished
[2025-11-26 02:12:24] 2025-11-26 01:11:35,883 | INFO     | [job] validate thread has finished
[2025-11-26 02:12:24] 2025-11-26 01:11:35,920 | INFO     | [payload] validate_post thread has finished
[2025-11-26 02:12:24] 2025-11-26 01:11:36,012 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 02:12:24] 2025-11-26 01:11:36,204 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 02:12:24] 2025-11-26 01:11:36,246 | INFO     | [data] copytool_in thread has finished
[2025-11-26 02:12:24] 2025-11-26 01:11:36,387 | INFO     | [data] control thread has finished
[2025-11-26 02:12:24] 2025-11-26 01:11:36,708 | INFO     | [payload] failed_post thread has finished
[2025-11-26 02:12:24] 2025-11-26 01:11:36,761 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 02:12:24] 2025-11-26 01:11:36,861 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 02:12:24] 2025-11-26 01:11:37,805 | INFO     | [data] copytool_out thread has finished
[2025-11-26 02:12:24] 2025-11-26 01:11:39,205 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 02:12:24] 2025-11-26 01:12:05,229 | INFO     | PID=1975527 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 02:12:24] 2025-11-26 01:12:05,230 | INFO     | .. there are 2 such processes running
[2025-11-26 02:12:24] 2025-11-26 01:12:05,230 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 02:12:24] 2025-11-26 01:12:05,230 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 02:12:24] 2025-11-26 01:12:05,230 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 02:12:24] 2025-11-26 01:12:17,595 | INFO     | [monitor] cgroup control has ended
[2025-11-26 02:12:24] 2025-11-26 01:12:19,419 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140497329108800)>', '<ExcThread(monitor, started 140497047750400)>']
[2025-11-26 02:12:24] 2025-11-26 01:12:20,301 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 02:12:24] 2025-11-26 01:12:20,301 | INFO     | [monitor] control thread has ended
[2025-11-26 02:12:24] 2025-11-26 01:12:24,444 | INFO     | all workflow threads have been joined
[2025-11-26 02:12:24] 2025-11-26 01:12:24,444 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 02:12:24] 2025-11-26 01:12:24,445 | INFO     | traces error code: 0
[2025-11-26 02:12:24] 2025-11-26 01:12:24,445 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 02:12:24] 2025-11-26 01:12:24,529 [wrapper] ==== pilot stdout END ====
[2025-11-26 02:12:24] 2025-11-26 01:12:24,531 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 02:12:24] 2025-11-26 01:12:24,533 [wrapper] pilotpid: 1975527
[2025-11-26 02:12:24] 2025-11-26 01:12:24,536 [wrapper] Pilot exit status: 0
[2025-11-26 02:12:24] 2025-11-26 01:12:24,544 [wrapper] pandaids: 6895351225
[2025-11-26 02:12:24] 2025-11-26 01:12:24,569 [wrapper] cleanup supervisor_pilot 2196158 1975528
[2025-11-26 02:12:24] 2025-11-26 01:12:24,572 [wrapper] Test setup, not cleaning
[2025-11-26 02:12:24] 2025-11-26 01:12:24,574 [wrapper] apfmon messages muted
[2025-11-26 02:12:24] 2025-11-26 01:12:24,576 [wrapper] ==== wrapper stdout END ====
[2025-11-26 02:12:24] 2025-11-26 01:12:24,577 [wrapper] ==== wrapper stderr END ====
[2025-11-26 02:12:24]  *** Error codes and diagnostics ***
[2025-11-26 02:12:24]     "exeErrorCode": 0,
[2025-11-26 02:12:24]     "exeErrorDiag": "",
[2025-11-26 02:12:24]     "pilotErrorCode": 0,
[2025-11-26 02:12:24]     "pilotErrorDiag": "",
[2025-11-26 02:12:24]  *** Listing of results directory ***
[2025-11-26 02:12:24] total 1308684
[2025-11-26 02:12:24] -rw-r--r-- 1 boinc boinc    576529 Nov 23 00:34 pilot3.tar.gz
[2025-11-26 02:12:24] -rwx------ 1 boinc boinc     36292 Nov 23 00:46 runpilot2-wrapper.sh
[2025-11-26 02:12:24] -rw-r--r-- 1 boinc boinc      5112 Nov 23 00:46 queuedata.json
[2025-11-26 02:12:24] -rw-r--r-- 1 boinc boinc       100 Nov 25 14:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 02:12:24] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 14:24 run_atlas
[2025-11-26 02:12:24] -rw-r--r-- 1 boinc boinc       105 Nov 25 14:24 job.xml
[2025-11-26 02:12:24] -rw-r--r-- 1 boinc boinc      6295 Nov 25 14:24 init_data.xml
[2025-11-26 02:12:24] -rw-r--r-- 2 boinc boinc 410464901 Nov 25 14:24 EVNT.47483658._000541.pool.root.1
[2025-11-26 02:12:24] drwxrwx--x 2 boinc boinc        68 Nov 25 14:24 shared
[2025-11-26 02:12:24] -rw-r--r-- 2 boinc boinc    590096 Nov 25 14:24 input.tar.gz
[2025-11-26 02:12:24] -rw-r--r-- 2 boinc boinc     15847 Nov 25 14:24 start_atlas.sh
[2025-11-26 02:12:24] -rw-r--r-- 1 boinc boinc         0 Nov 25 14:24 boinc_lockfile
[2025-11-26 02:12:24] -rw-r--r-- 1 boinc boinc      2784 Nov 25 14:24 pandaJob.out
[2025-11-26 02:12:24] -rw------- 1 boinc boinc    991909 Nov 25 14:25 agis_schedconf.cvmfs.json
[2025-11-26 02:12:24] drwx------ 5 boinc boinc      4096 Nov 25 14:25 pilot3
[2025-11-26 02:12:24] -rw-r--r-- 1 boinc boinc       533 Nov 26 02:03 boinc_task_state.xml
[2025-11-26 02:12:24] -rw------- 1 boinc boinc 908925848 Nov 26 02:10 HITS.47556137._005363.pool.root.1
[2025-11-26 02:12:24] -rw------- 1 boinc boinc      1037 Nov 26 02:11 memory_monitor_summary.json
[2025-11-26 02:12:24] -rw------- 1 boinc boinc   1516240 Nov 26 02:11 agis_ddmendpoints.agis.ALL.json
[2025-11-26 02:12:24] -rw------- 1 boinc boinc   2383551 Nov 26 02:11 log.47556137._005363.job.log.tgz.1
[2025-11-26 02:12:24] -rw------- 1 boinc boinc        95 Nov 26 02:11 pilot_heartbeat.json
[2025-11-26 02:12:24] -rw------- 1 boinc boinc      8608 Nov 26 02:11 heartbeat.json
[2025-11-26 02:12:24] -rw-r--r-- 1 boinc boinc      8192 Nov 26 02:12 boinc_mmap_file
[2025-11-26 02:12:24] -rw-r--r-- 1 boinc boinc        29 Nov 26 02:12 wrapper_checkpoint.txt
[2025-11-26 02:12:24] -rw------- 1 boinc boinc      4824 Nov 26 02:12 pilotlog.txt
[2025-11-26 02:12:24] -rw------- 1 boinc boinc   6015927 Nov 26 02:12 log.47556137._005363.job.log.1
[2025-11-26 02:12:24] -rw------- 1 boinc boinc       353 Nov 26 02:12 output.list
[2025-11-26 02:12:24] -rw-r--r-- 1 boinc boinc       620 Nov 26 02:12 runtime_log
[2025-11-26 02:12:24] -rw------- 1 boinc boinc   8417280 Nov 26 02:12 result.tar.gz
[2025-11-26 02:12:24] -rw-r--r-- 1 boinc boinc      8842 Nov 26 02:12 runtime_log.err
[2025-11-26 02:12:24] -rw------- 1 boinc boinc       665 Nov 26 02:12 qj7MDmJUCh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmQMIKDm8jKVOm.diag
[2025-11-26 02:12:24] -rw-r--r-- 1 boinc boinc     21342 Nov 26 02:12 stderr.txt
[2025-11-26 02:12:24] HITS file was successfully produced:
[2025-11-26 02:12:24] -rw------- 1 boinc boinc 908925848 Nov 26 02:10 shared/HITS.pool.root.1
[2025-11-26 02:12:24]  *** Contents of shared directory: ***
[2025-11-26 02:12:24] total 1297288
[2025-11-26 02:12:24] -rw-r--r-- 2 boinc boinc 410464901 Nov 25 14:24 ATLAS.root_0
[2025-11-26 02:12:24] -rw-r--r-- 2 boinc boinc    590096 Nov 25 14:24 input.tar.gz
[2025-11-26 02:12:24] -rw-r--r-- 2 boinc boinc     15847 Nov 25 14:24 start_atlas.sh
[2025-11-26 02:12:24] -rw------- 1 boinc boinc 908925848 Nov 26 02:10 HITS.pool.root.1
[2025-11-26 02:12:24] -rw------- 1 boinc boinc   8417280 Nov 26 02:12 result.tar.gz
02:12:26 (1971091): run_atlas exited; CPU time 496206.823223
02:12:26 (1971091): called boinc_finish(0)

</stderr_txt>
]]>

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