Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:31:29 (1662145): wrapper (7.7.26015): starting
02:31:29 (1662145): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 02:31:29] Arguments: --nthreads 12
[2025-11-25 02:31:29] Threads: 12
[2025-11-25 02:31:29] Checking for CVMFS
[2025-11-25 02:31:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 02:31:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 02:31:29] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 02:31:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 02:31:29] 2.13.3.0 14095 4960 85048 153265 0 81 3085109 4097025 1043 130560 0 3808295 99.991 168685 21830 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-25 02:31:29] CVMFS is ok
[2025-11-25 02:31:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 02:31:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 02:31:29] Further information can be found at the LHC@home message board.
[2025-11-25 02:31:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 02:31:29] Checking for apptainer binary...
[2025-11-25 02:31:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 02:31:29] Running /usr/bin/apptainer --version
[2025-11-25 02:31:29] apptainer version 1.4.4-1.el9
[2025-11-25 02:31:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 02:31:29] pckelar7.cern.ch
[2025-11-25 02:31:29] apptainer works
[2025-11-25 02:31:29] Set ATHENA_PROC_NUMBER=12
[2025-11-25 02:31:29] Set ATHENA_CORE_NUMBER=12
[2025-11-25 02:31:29] Starting ATLAS job with PandaID=6894052180
[2025-11-25 02:31:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 07:45:26]  *** The last 200 lines of the pilot log: ***
[2025-11-25 07:45:26] 2025-11-25 06:45:05,882 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6894052180/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 07:45:26] 2025-11-25 06:45:05,883 | INFO     | extracted standard info from prmon json
[2025-11-25 07:45:26] 2025-11-25 06:45:05,883 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 07:45:26] 2025-11-25 06:45:05,883 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 07:45:26] 2025-11-25 06:45:05,883 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 07:45:26] 2025-11-25 06:45:05,883 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 07:45:26] 2025-11-25 06:45:05,892 | INFO     | fitting pss+swap vs Time
[2025-11-25 07:45:26] 2025-11-25 06:45:05,893 | INFO     | sum of square deviations: 9059954057.0
[2025-11-25 07:45:26] 2025-11-25 06:45:05,896 | INFO     | sum of deviations: -53332664322.5
[2025-11-25 07:45:26] 2025-11-25 06:45:05,896 | INFO     | mean x: 1764043696.5
[2025-11-25 07:45:26] 2025-11-25 06:45:05,896 | INFO     | mean y: 2821772.2824675324
[2025-11-25 07:45:26] 2025-11-25 06:45:05,896 | INFO     | intersect: 10387107357.369576
[2025-11-25 07:45:26] 2025-11-25 06:45:05,897 | INFO     | chi2: 2.843103284101554
[2025-11-25 07:45:26] 2025-11-25 06:45:05,897 | INFO     | sum of square deviations: 8625843592.0
[2025-11-25 07:45:26] 2025-11-25 06:45:05,899 | INFO     | sum of deviations: -28710357051.0
[2025-11-25 07:45:26] 2025-11-25 06:45:05,899 | INFO     | mean x: 1764043544.0
[2025-11-25 07:45:26] 2025-11-25 06:45:05,899 | INFO     | mean y: 2830312.1584158414
[2025-11-25 07:45:26] 2025-11-25 06:45:05,899 | INFO     | intersect: 5874293139.136073
[2025-11-25 07:45:26] 2025-11-25 06:45:05,900 | INFO     | chi2: 2.0184414423815293
[2025-11-25 07:45:26] 2025-11-25 06:45:05,900 | INFO     | current chi2=2.0184414423815293 (change=29.005694106558817 %)
[2025-11-25 07:45:26] 2025-11-25 06:45:05,900 | INFO     | sum of square deviations: 8205826414.5
[2025-11-25 07:45:26] 2025-11-25 06:45:05,902 | INFO     | sum of deviations: -28214019266.00001
[2025-11-25 07:45:26] 2025-11-25 06:45:05,902 | INFO     | mean x: 1764043391.5
[2025-11-25 07:45:26] 2025-11-25 06:45:05,902 | INFO     | mean y: 2830492.3959731543
[2025-11-25 07:45:26] 2025-11-25 06:45:05,902 | INFO     | intersect: 6068125042.850298
[2025-11-25 07:45:26] 2025-11-25 06:45:05,903 | INFO     | chi2: 2.0173166807492238
[2025-11-25 07:45:26] 2025-11-25 06:45:05,903 | INFO     | current chi2=2.0173166807492238 (change=0.05572426371599273 %)
[2025-11-25 07:45:26] 2025-11-25 06:45:05,903 | INFO     | right removable region: 297
[2025-11-25 07:45:26] 2025-11-25 06:45:05,903 | INFO     | sum of square deviations: 8625843592.0
[2025-11-25 07:45:26] 2025-11-25 06:45:05,905 | INFO     | sum of deviations: -109880639560.0
[2025-11-25 07:45:26] 2025-11-25 06:45:05,905 | INFO     | mean x: 1764043849.0
[2025-11-25 07:45:26] 2025-11-25 06:45:05,905 | INFO     | mean y: 2841500.828382838
[2025-11-25 07:45:26] 2025-11-25 06:45:05,906 | INFO     | intersect: 22474181755.56878
[2025-11-25 07:45:26] 2025-11-25 06:45:05,906 | INFO     | chi2: 1.2795281832651775
[2025-11-25 07:45:26] 2025-11-25 06:45:05,906 | INFO     | current chi2=1.2795281832651775 (change=54.99536754713715 %)
[2025-11-25 07:45:26] 2025-11-25 06:45:05,906 | INFO     | sum of square deviations: 8205826414.5
[2025-11-25 07:45:26] 2025-11-25 06:45:05,908 | INFO     | sum of deviations: -117805001391.00002
[2025-11-25 07:45:26] 2025-11-25 06:45:05,908 | INFO     | mean x: 1764044001.5
[2025-11-25 07:45:26] 2025-11-25 06:45:05,908 | INFO     | mean y: 2844365.6174496645
[2025-11-25 07:45:26] 2025-11-25 06:45:05,909 | INFO     | intersect: 25327923833.94243
[2025-11-25 07:45:26] 2025-11-25 06:45:05,909 | INFO     | chi2: 1.225652645487813
[2025-11-25 07:45:26] 2025-11-25 06:45:05,909 | INFO     | current chi2=1.225652645487813 (change=4.210578436801734 %)
[2025-11-25 07:45:26] 2025-11-25 06:45:05,909 | INFO     | left removable region: 20
[2025-11-25 07:45:26] 2025-11-25 06:45:05,909 | INFO     | sum of square deviations: 6590404498.0
[2025-11-25 07:45:26] 2025-11-25 06:45:05,911 | INFO     | sum of deviations: -65462350629.0
[2025-11-25 07:45:26] 2025-11-25 06:45:05,911 | INFO     | mean x: 1764043971.0
[2025-11-25 07:45:26] 2025-11-25 06:45:05,911 | INFO     | mean y: 2843691.8628158844
[2025-11-25 07:45:26] 2025-11-25 06:45:05,911 | INFO     | intersect: 17525055718.39623
[2025-11-25 07:45:26] 2025-11-25 06:45:05,912 | INFO     | chi2: 0.3302021882115755
[2025-11-25 07:45:26] 2025-11-25 06:45:05,912 | INFO     | current memory leak: -9.93 B/s (using 277 data points, chi2=0.33)
[2025-11-25 07:45:26] 2025-11-25 06:45:05,912 | INFO     | could have reported an average CPU frequency of 2805 MHz (14 samples)
[2025-11-25 07:45:26] 2025-11-25 06:45:05,912 | INFO     | ..............................
[2025-11-25 07:45:26] 2025-11-25 06:45:05,913 | INFO     | . Timing measurements:
[2025-11-25 07:45:26] 2025-11-25 06:45:05,913 | INFO     | . get job = 0 s
[2025-11-25 07:45:26] 2025-11-25 06:45:05,913 | INFO     | . initial setup = 1 s
[2025-11-25 07:45:26] 2025-11-25 06:45:05,913 | INFO     | . payload setup = 10 s
[2025-11-25 07:45:26] 2025-11-25 06:45:05,913 | INFO     | . stage-in = 0 s
[2025-11-25 07:45:26] 2025-11-25 06:45:05,913 | INFO     | . payload execution = 18767 s
[2025-11-25 07:45:26] 2025-11-25 06:45:05,913 | INFO     | . stage-out = 1 s
[2025-11-25 07:45:26] 2025-11-25 06:45:05,913 | INFO     | . log creation = 0 s
[2025-11-25 07:45:26] 2025-11-25 06:45:05,913 | INFO     | ..............................
[2025-11-25 07:45:26] 2025-11-25 06:45:05,976 | INFO     | time since job start (18805s) is within the limit (172800.0s)
[2025-11-25 07:45:26] 2025-11-25 06:45:05,988 | INFO     | 
[2025-11-25 07:45:26] 2025-11-25 06:45:05,989 | INFO     | job summary report
[2025-11-25 07:45:26] 2025-11-25 06:45:05,989 | INFO     | --------------------------------------------------
[2025-11-25 07:45:26] 2025-11-25 06:45:05,989 | INFO     | PanDA job id: 6894052180
[2025-11-25 07:45:26] 2025-11-25 06:45:05,989 | INFO     | task id: 47523650
[2025-11-25 07:45:26] 2025-11-25 06:45:05,989 | INFO     | errors: (none)
[2025-11-25 07:45:26] 2025-11-25 06:45:05,989 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 07:45:26] 2025-11-25 06:45:05,990 | INFO     | pilot state: finished 
[2025-11-25 07:45:26] 2025-11-25 06:45:05,990 | INFO     | transexitcode: 0
[2025-11-25 07:45:26] 2025-11-25 06:45:05,990 | INFO     | exeerrorcode: 0
[2025-11-25 07:45:26] 2025-11-25 06:45:05,990 | INFO     | exeerrordiag: 
[2025-11-25 07:45:26] 2025-11-25 06:45:05,990 | INFO     | exitcode: 0
[2025-11-25 07:45:26] 2025-11-25 06:45:05,990 | INFO     | exitmsg: OK
[2025-11-25 07:45:26] 2025-11-25 06:45:05,991 | INFO     | cpuconsumptiontime: 213183 s
[2025-11-25 07:45:26] 2025-11-25 06:45:05,991 | INFO     | nevents: 400
[2025-11-25 07:45:26] 2025-11-25 06:45:05,991 | INFO     | neventsw: 0
[2025-11-25 07:45:26] 2025-11-25 06:45:05,991 | INFO     | pid: 1673466
[2025-11-25 07:45:26] 2025-11-25 06:45:05,991 | INFO     | pgrp: 1673466
[2025-11-25 07:45:26] 2025-11-25 06:45:05,991 | INFO     | corecount: 12
[2025-11-25 07:45:26] 2025-11-25 06:45:05,991 | INFO     | event service: False
[2025-11-25 07:45:26] 2025-11-25 06:45:05,992 | INFO     | sizes: {0: 2283903, 1: 2283903, 6: 2284193, 12: 2284221, 18779: 2316574, 18780: 2316573, 18782: 2325755, 18784: 2325811, 18789: 2326005}
[2025-11-25 07:45:26] 2025-11-25 06:45:05,992 | INFO     | --------------------------------------------------
[2025-11-25 07:45:26] 2025-11-25 06:45:05,992 | INFO     | 
[2025-11-25 07:45:26] 2025-11-25 06:45:05,992 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-11-25 07:45:26] 2025-11-25 06:45:06,010 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 07:45:26] 2025-11-25 06:45:06,011 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 07:45:26] 2025-11-25 06:45:06,011 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 07:45:26] 2025-11-25 06:45:06,011 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 07:45:26] 2025-11-25 06:45:06,011 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 07:45:26] 2025-11-25 06:45:06,011 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 07:45:26] 2025-11-25 06:45:06,012 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 07:45:26] 2025-11-25 06:45:06,012 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 07:45:26] 2025-11-25 06:45:06,012 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 07:45:26] 2025-11-25 06:45:06,012 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 07:45:26] 2025-11-25 06:45:06,012 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 07:45:26] 2025-11-25 06:45:06,012 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 07:45:26] 2025-11-25 06:45:06,013 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 07:45:26] 2025-11-25 06:45:06,013 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 07:45:26] 2025-11-25 06:45:06,013 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 07:45:26] 2025-11-25 06:45:06,013 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 07:45:26] 2025-11-25 06:45:06,013 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 07:45:26] 2025-11-25 06:45:06,014 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 07:45:26] 2025-11-25 06:45:06,014 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 07:45:26] 2025-11-25 06:45:06,014 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 07:45:26] 2025-11-25 06:45:06,014 | INFO     | job 6894052180 has completed (purged errors)
[2025-11-25 07:45:26] 2025-11-25 06:45:06,014 | INFO     | overall cleanup function is called
[2025-11-25 07:45:26] 2025-11-25 06:45:07,023 | INFO     | --- collectZombieJob: --- 10, [1673466]
[2025-11-25 07:45:26] 2025-11-25 06:45:07,024 | INFO     | zombie collector waiting for pid 1673466
[2025-11-25 07:45:26] 2025-11-25 06:45:07,024 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 07:45:26] 2025-11-25 06:45:07,024 | INFO     | collected zombie processes
[2025-11-25 07:45:26] 2025-11-25 06:45:07,024 | INFO     | will attempt to kill all subprocesses of pid=1673466
[2025-11-25 07:45:26] 2025-11-25 06:45:07,383 | INFO     | PID=1665980 has CPU usage=14.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-25 07:45:26] 2025-11-25 06:45:07,383 | INFO     | .. there are 2 such processes running
[2025-11-25 07:45:26] 2025-11-25 06:45:07,393 | INFO     | process IDs to be killed: [1673466] (in reverse order)
[2025-11-25 07:45:26] 2025-11-25 06:45:07,449 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 07:45:26] 2025-11-25 06:45:07,449 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 07:45:26] 2025-11-25 06:45:07,456 | INFO     | did not find any defunct processes belonging to 1673466
[2025-11-25 07:45:26] 2025-11-25 06:45:07,462 | INFO     | did not find any defunct processes belonging to 1673466
[2025-11-25 07:45:26] 2025-11-25 06:45:07,464 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 07:45:26] 2025-11-25 06:45:07,464 | INFO     | ready for new job
[2025-11-25 07:45:26] 2025-11-25 06:45:07,464 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 07:45:26] 2025-11-25 06:45:07,467 | INFO     | ***************************************
[2025-11-25 07:45:26] 2025-11-25 06:45:07,467 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 07:45:26] 2025-11-25 06:45:07,467 | INFO     | ***************************************
[2025-11-25 07:45:26] 2025-11-25 06:45:07,467 | INFO     | 
[2025-11-25 07:45:26] 2025-11-25 06:45:07,469 | INFO     | architecture information:
[2025-11-25 07:45:26] 2025-11-25 06:45:07,469 | INFO     | executing command: cat /etc/os-release
[2025-11-25 07:45:26] 2025-11-25 06:45:07,484 | INFO     | cat /etc/os-release:
[2025-11-25 07:45:26] NAME="CentOS Linux"
[2025-11-25 07:45:26] VERSION="7 (Core)"
[2025-11-25 07:45:26] ID="centos"
[2025-11-25 07:45:26] ID_LIKE="rhel fedora"
[2025-11-25 07:45:26] VERSION_ID="7"
[2025-11-25 07:45:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 07:45:26] ANSI_COLOR="0;31"
[2025-11-25 07:45:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 07:45:26] HOME_URL="https://www.centos.org/"
[2025-11-25 07:45:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 07:45:26] 
[2025-11-25 07:45:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 07:45:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 07:45:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 07:45:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 07:45:26] 
[2025-11-25 07:45:26] 2025-11-25 06:45:07,485 | INFO     | ***************************************
[2025-11-25 07:45:26] 2025-11-25 06:45:07,988 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-11-25 07:45:26] 2025-11-25 06:45:08,004 | INFO     | sufficient remaining disk space (1784579883008 B)
[2025-11-25 07:45:26] 2025-11-25 06:45:08,004 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 07:45:26] 2025-11-25 06:45:08,005 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 07:45:26] 2025-11-25 06:45:08,005 | INFO     | update_server=False
[2025-11-25 07:45:26] 2025-11-25 06:45:08,005 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 07:45:26] 2025-11-25 06:45:08,005 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 07:45:26] 2025-11-25 06:45:08,006 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 07:45:26] 2025-11-25 06:45:08,006 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-25 07:45:26] 2025-11-25 06:45:08,007 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 07:45:26] 2025-11-25 06:45:08,007 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 07:45:26] 2025-11-25 06:45:08,007 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 07:45:26] 2025-11-25 06:45:08,478 | INFO     | all data control threads have been joined
[2025-11-25 07:45:26] 2025-11-25 06:45:08,681 | INFO     | all job control threads have been joined
[2025-11-25 07:45:26] 2025-11-25 06:45:08,825 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 07:45:26] 2025-11-25 06:45:08,825 | INFO     | aborting loop
[2025-11-25 07:45:26] 2025-11-25 06:45:08,871 | INFO     | all payload control threads have been joined
[2025-11-25 07:45:26] 2025-11-25 06:45:09,010 | INFO     | [job] retrieve thread has finished
[2025-11-25 07:45:26] 2025-11-25 06:45:09,148 | INFO     | [job] validate thread has finished
[2025-11-25 07:45:26] 2025-11-25 06:45:09,149 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 07:45:26] 2025-11-25 06:45:09,201 | INFO     | [payload] validate_post thread has finished
[2025-11-25 07:45:26] 2025-11-25 06:45:09,322 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 07:45:26] 2025-11-25 06:45:09,484 | INFO     | [data] control thread has finished
[2025-11-25 07:45:26] 2025-11-25 06:45:09,687 | INFO     | [job] control thread has finished
[2025-11-25 07:45:26] 2025-11-25 06:45:09,831 | INFO     | [job] job monitor thread has finished
[2025-11-25 07:45:26] 2025-11-25 06:45:09,877 | INFO     | [payload] control thread has finished
[2025-11-25 07:45:26] 2025-11-25 06:45:10,012 | INFO     | [data] copytool_out thread has finished
[2025-11-25 07:45:26] 2025-11-25 06:45:10,411 | INFO     | [data] copytool_in thread has finished
[2025-11-25 07:45:26] 2025-11-25 06:45:10,421 | INFO     | [payload] failed_post thread has finished
[2025-11-25 07:45:26] 2025-11-25 06:45:10,464 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 07:45:26] 2025-11-25 06:45:10,993 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 07:45:26] 2025-11-25 06:45:11,393 | INFO     | [monitor] cgroup control has ended
[2025-11-25 07:45:26] 2025-11-25 06:45:11,998 | INFO     | [job] queue monitor thread has finished
[2025-11-25 07:45:26] 2025-11-25 06:45:12,012 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 07:45:26] 2025-11-25 06:45:18,144 | INFO     | job.realtimelogging is not enabled
[2025-11-25 07:45:26] 2025-11-25 06:45:19,149 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 07:45:26] 2025-11-25 06:45:20,829 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140173237643072)>', '<ExcThread(monitor, started 140172742084352)>']
[2025-11-25 07:45:26] 2025-11-25 06:45:21,072 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 07:45:26] 2025-11-25 06:45:21,072 | INFO     | [monitor] control thread has ended
[2025-11-25 07:45:26] 2025-11-25 06:45:25,834 | INFO     | all workflow threads have been joined
[2025-11-25 07:45:26] 2025-11-25 06:45:25,834 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 07:45:26] 2025-11-25 06:45:25,834 | INFO     | traces error code: 0
[2025-11-25 07:45:26] 2025-11-25 06:45:25,835 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 07:45:26] 2025-11-25 06:45:25,958 [wrapper] ==== pilot stdout END ====
[2025-11-25 07:45:26] 2025-11-25 06:45:25,961 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 07:45:26] 2025-11-25 06:45:25,963 [wrapper] pilotpid: 1665980
[2025-11-25 07:45:26] 2025-11-25 06:45:25,966 [wrapper] Pilot exit status: 0
[2025-11-25 07:45:26] 2025-11-25 06:45:25,976 [wrapper] pandaids: 6894052180
[2025-11-25 07:45:26] 2025-11-25 06:45:26,012 [wrapper] cleanup supervisor_pilot 1782840 1665981
[2025-11-25 07:45:26] 2025-11-25 06:45:26,015 [wrapper] Test setup, not cleaning
[2025-11-25 07:45:26] 2025-11-25 06:45:26,017 [wrapper] apfmon messages muted
[2025-11-25 07:45:26] 2025-11-25 06:45:26,020 [wrapper] ==== wrapper stdout END ====
[2025-11-25 07:45:26] 2025-11-25 06:45:26,022 [wrapper] ==== wrapper stderr END ====
[2025-11-25 07:45:26]  *** Error codes and diagnostics ***
[2025-11-25 07:45:26]     "exeErrorCode": 0,
[2025-11-25 07:45:26]     "exeErrorDiag": "",
[2025-11-25 07:45:26]     "pilotErrorCode": 0,
[2025-11-25 07:45:26]     "pilotErrorDiag": "",
[2025-11-25 07:45:26]  *** Listing of results directory ***
[2025-11-25 07:45:26] total 619692
[2025-11-25 07:45:26] -rw-r--r-- 1 boinc boinc    576529 Nov 23 00:08 pilot3.tar.gz
[2025-11-25 07:45:26] -rwx------ 1 boinc boinc     36292 Nov 23 00:12 runpilot2-wrapper.sh
[2025-11-25 07:45:26] -rw-r--r-- 1 boinc boinc      5112 Nov 23 00:12 queuedata.json
[2025-11-25 07:45:26] -rw-r--r-- 1 boinc boinc       100 Nov 25 02:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 07:45:26] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 02:31 run_atlas
[2025-11-25 07:45:26] -rw-r--r-- 1 boinc boinc       105 Nov 25 02:31 job.xml
[2025-11-25 07:45:26] -rw-r--r-- 1 boinc boinc      6252 Nov 25 02:31 init_data.xml
[2025-11-25 07:45:26] -rw-r--r-- 2 boinc boinc 292942607 Nov 25 02:31 EVNT.47523648._000002.pool.root.1
[2025-11-25 07:45:26] -rw-r--r-- 2 boinc boinc     15847 Nov 25 02:31 start_atlas.sh
[2025-11-25 07:45:26] drwxrwx--x 2 boinc boinc      4096 Nov 25 02:31 shared
[2025-11-25 07:45:26] -rw-r--r-- 2 boinc boinc    589950 Nov 25 02:31 input.tar.gz
[2025-11-25 07:45:26] -rw-r--r-- 1 boinc boinc         0 Nov 25 02:31 boinc_lockfile
[2025-11-25 07:45:26] -rw-r--r-- 1 boinc boinc      2622 Nov 25 02:31 pandaJob.out
[2025-11-25 07:45:26] -rw------- 1 boinc boinc    991801 Nov 25 02:31 agis_schedconf.cvmfs.json
[2025-11-25 07:45:26] drwx------ 5 boinc boinc      4096 Nov 25 02:31 pilot3
[2025-11-25 07:45:26] -rw------- 1 boinc boinc        95 Nov 25 07:44 pilot_heartbeat.json
[2025-11-25 07:45:26] -rw-r--r-- 1 boinc boinc       532 Nov 25 07:44 boinc_task_state.xml
[2025-11-25 07:45:26] -rw------- 1 boinc boinc 331370276 Nov 25 07:44 HITS.47523650._000028.pool.root.1
[2025-11-25 07:45:26] -rw------- 1 boinc boinc      1025 Nov 25 07:44 memory_monitor_summary.json
[2025-11-25 07:45:26] -rw------- 1 boinc boinc   1516227 Nov 25 07:44 agis_ddmendpoints.agis.ALL.json
[2025-11-25 07:45:26] -rw------- 1 boinc boinc    573766 Nov 25 07:44 log.47523650._000028.job.log.tgz.1
[2025-11-25 07:45:26] -rw------- 1 boinc boinc      7791 Nov 25 07:45 heartbeat.json
[2025-11-25 07:45:26] -rw-r--r-- 1 boinc boinc      8192 Nov 25 07:45 boinc_mmap_file
[2025-11-25 07:45:26] -rw-r--r-- 1 boinc boinc        29 Nov 25 07:45 wrapper_checkpoint.txt
[2025-11-25 07:45:26] -rw------- 1 boinc boinc      4626 Nov 25 07:45 pilotlog.txt
[2025-11-25 07:45:26] -rw------- 1 boinc boinc   2594207 Nov 25 07:45 log.47523650._000028.job.log.1
[2025-11-25 07:45:26] -rw------- 1 boinc boinc       357 Nov 25 07:45 output.list
[2025-11-25 07:45:26] -rw-r--r-- 1 boinc boinc       620 Nov 25 07:45 runtime_log
[2025-11-25 07:45:26] -rw------- 1 boinc boinc   3184640 Nov 25 07:45 result.tar.gz
[2025-11-25 07:45:26] -rw-r--r-- 1 boinc boinc      8842 Nov 25 07:45 runtime_log.err
[2025-11-25 07:45:26] -rw------- 1 boinc boinc       662 Nov 25 07:45 DyrNDmFxBh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAMIKDmoCqcon.diag
[2025-11-25 07:45:26] -rw-r--r-- 1 boinc boinc     21209 Nov 25 07:45 stderr.txt
[2025-11-25 07:45:26] HITS file was successfully produced:
[2025-11-25 07:45:26] -rw------- 1 boinc boinc 331370276 Nov 25 07:44 shared/HITS.pool.root.1
[2025-11-25 07:45:26]  *** Contents of shared directory: ***
[2025-11-25 07:45:26] total 613400
[2025-11-25 07:45:26] -rw-r--r-- 2 boinc boinc 292942607 Nov 25 02:31 ATLAS.root_0
[2025-11-25 07:45:26] -rw-r--r-- 2 boinc boinc     15847 Nov 25 02:31 start_atlas.sh
[2025-11-25 07:45:26] -rw-r--r-- 2 boinc boinc    589950 Nov 25 02:31 input.tar.gz
[2025-11-25 07:45:26] -rw------- 1 boinc boinc 331370276 Nov 25 07:44 HITS.pool.root.1
[2025-11-25 07:45:26] -rw------- 1 boinc boinc   3184640 Nov 25 07:45 result.tar.gz
07:45:27 (1662145): run_atlas exited; CPU time 213634.270423
07:45:27 (1662145): called boinc_finish(0)

</stderr_txt>
]]>

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