Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:45:40 (2787789): wrapper (7.7.26015): starting
15:45:40 (2787789): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 15:45:40] Arguments: --nthreads 8
[2025-11-23 15:45:40] Threads: 8
[2025-11-23 15:45:40] Checking for CVMFS
[2025-11-23 15:45:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 15:45:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 15:45:41] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 15:45:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 15:45:41] 2.13.3.0 11771 26182 243376 153220 0 467 24741092 32935937 28101 16776704 0 186339008 99.609 189910501 38607 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-23 15:45:41] CVMFS is ok
[2025-11-23 15:45:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 15:45:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 15:45:41] Further information can be found at the LHC@home message board.
[2025-11-23 15:45:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 15:45:41] Checking for apptainer binary...
[2025-11-23 15:45:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 15:45:41] Running /usr/bin/apptainer --version
[2025-11-23 15:45:41] apptainer version 1.4.4-1.el9
[2025-11-23 15:45:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 15:45:41] c7-2-14.aglt2.org
[2025-11-23 15:45:41] apptainer works
[2025-11-23 15:45:41] Set ATHENA_PROC_NUMBER=8
[2025-11-23 15:45:41] Set ATHENA_CORE_NUMBER=8
[2025-11-23 15:45:41] Starting ATLAS job with PandaID=6895332469
[2025-11-23 15:45:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 12:11:20]  *** The last 200 lines of the pilot log: ***
[2025-11-24 12:11:20] 2025-11-24 17:10:27,848 | INFO     | monitor loop #4119: job 0:6895332469 is in state 'finished'
[2025-11-24 12:11:20] 2025-11-24 17:10:27,848 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 12:11:20] 2025-11-24 17:10:29,912 | INFO     | PID=2796104 has CPU usage=15.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-24 12:11:20] 2025-11-24 17:10:29,913 | INFO     | .. there are 43 such processes running
[2025-11-24 12:11:20] 2025-11-24 17:10:30,357 | INFO     | monitor loop #4120: job 0:6895332469 is in state 'finished'
[2025-11-24 12:11:20] 2025-11-24 17:10:30,357 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 12:11:20] 2025-11-24 17:10:30,914 | INFO     | time since job start (73471s) is within the limit (172800.0s)
[2025-11-24 12:11:20] 2025-11-24 17:10:32,862 | INFO     | monitor loop #4121: job 0:6895332469 is in state 'finished'
[2025-11-24 12:11:20] 2025-11-24 17:10:32,862 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 12:11:20] 2025-11-24 17:10:32,921 | INFO     | time since job start (73473s) is within the limit (172800.0s)
[2025-11-24 12:11:20] 2025-11-24 17:10:34,928 | INFO     | time since job start (73475s) is within the limit (172800.0s)
[2025-11-24 12:11:20] 2025-11-24 17:10:35,367 | INFO     | monitor loop #4122: job 0:6895332469 is in state 'finished'
[2025-11-24 12:11:20] 2025-11-24 17:10:35,367 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 12:11:20] 2025-11-24 17:10:36,967 | INFO     | time since job start (73477s) is within the limit (172800.0s)
[2025-11-24 12:11:20] 2025-11-24 17:10:37,379 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 12:11:20] 2025-11-24 17:10:37,387 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3066.616552083333
[2025-11-24 12:11:20] 2025-11-24 17:10:37,577 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6895332469/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 12:11:20] 2025-11-24 17:10:37,578 | INFO     | extracted standard info from prmon json
[2025-11-24 12:11:20] 2025-11-24 17:10:37,578 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 12:11:20] 2025-11-24 17:10:37,578 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 12:11:20] 2025-11-24 17:10:37,896 | INFO     | monitor loop #4123: job 0:6895332469 is in state 'finished'
[2025-11-24 12:11:20] 2025-11-24 17:10:37,896 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 12:11:20] 2025-11-24 17:10:37,993 | INFO     | fitting pss+swap vs Time
[2025-11-24 12:11:20] 2025-11-24 17:10:38,014 | INFO     | sum of square deviations: 541222027195.74146
[2025-11-24 12:11:20] 2025-11-24 17:10:38,217 | INFO     | sum of deviations: 2542054670532.0815
[2025-11-24 12:11:20] 2025-11-24 17:10:38,217 | INFO     | mean x: 1763967487.6611295
[2025-11-24 12:11:20] 2025-11-24 17:10:38,217 | INFO     | mean y: 2874034.061461794
[2025-11-24 12:11:20] 2025-11-24 17:10:38,217 | INFO     | intersect: -8282268782.296917
[2025-11-24 12:11:20] 2025-11-24 17:10:38,218 | INFO     | chi2: 14.775497807336023
[2025-11-24 12:11:20] 2025-11-24 17:10:38,239 | INFO     | sum of square deviations: 534507890473.9739
[2025-11-24 12:11:20] 2025-11-24 17:10:38,406 | INFO     | sum of deviations: 2946305106547.4155
[2025-11-24 12:11:20] 2025-11-24 17:10:38,426 | INFO     | mean x: 1763967335.1659718
[2025-11-24 12:11:20] 2025-11-24 17:10:38,426 | INFO     | mean y: 2883214.29441201
[2025-11-24 12:11:20] 2025-11-24 17:10:38,426 | INFO     | intersect: -9720426880.854498
[2025-11-24 12:11:20] 2025-11-24 17:10:38,428 | INFO     | chi2: 11.419496251187795
[2025-11-24 12:11:20] 2025-11-24 17:10:38,428 | INFO     | current chi2=11.419496251187795 (change=22.713289257042675 %)
[2025-11-24 12:11:20] 2025-11-24 17:10:38,428 | INFO     | right removable region: 1198
[2025-11-24 12:11:20] 2025-11-24 17:10:38,429 | INFO     | sum of square deviations: 534507037693.97284
[2025-11-24 12:11:20] 2025-11-24 17:10:38,681 | INFO     | sum of deviations: 2225719630295.9165
[2025-11-24 12:11:20] 2025-11-24 17:10:38,681 | INFO     | mean x: 1763967640.1659718
[2025-11-24 12:11:20] 2025-11-24 17:10:38,681 | INFO     | mean y: 2881211.1059216014
[2025-11-24 12:11:20] 2025-11-24 17:10:38,681 | INFO     | intersect: -7342386721.871265
[2025-11-24 12:11:20] 2025-11-24 17:10:38,682 | INFO     | chi2: 12.817074009373723
[2025-11-24 12:11:20] 2025-11-24 17:10:38,682 | INFO     | current chi2=12.817074009373723 (change=13.254536825080402 %)
[2025-11-24 12:11:20] 2025-11-24 17:10:38,682 | INFO     | left removable region: 10
[2025-11-24 12:11:20] 2025-11-24 17:10:38,714 | INFO     | sum of square deviations: 519931207424.5829
[2025-11-24 12:11:20] 2025-11-24 17:10:38,874 | INFO     | sum of deviations: 2646748060274.7734
[2025-11-24 12:11:20] 2025-11-24 17:10:38,874 | INFO     | mean x: 1763967609.675084
[2025-11-24 12:11:20] 2025-11-24 17:10:38,874 | INFO     | mean y: 2894369.255892256
[2025-11-24 12:11:20] 2025-11-24 17:10:38,874 | INFO     | intersect: -8976712514.549547
[2025-11-24 12:11:20] 2025-11-24 17:10:38,892 | INFO     | chi2: 8.566452885816357
[2025-11-24 12:11:20] 2025-11-24 17:10:38,892 | INFO     | current memory leak: 5.09 B/s (using 1188 data points, chi2=8.57)
[2025-11-24 12:11:20] 2025-11-24 17:10:38,894 | INFO     | could have reported an average CPU frequency of 3116 MHz (44 samples)
[2025-11-24 12:11:20] 2025-11-24 17:10:38,894 | INFO     | ..............................
[2025-11-24 12:11:20] 2025-11-24 17:10:38,894 | INFO     | . Timing measurements:
[2025-11-24 12:11:20] 2025-11-24 17:10:38,894 | INFO     | . get job = 0 s
[2025-11-24 12:11:20] 2025-11-24 17:10:38,894 | INFO     | . initial setup = 2 s
[2025-11-24 12:11:20] 2025-11-24 17:10:38,894 | INFO     | . payload setup = 8 s
[2025-11-24 12:11:20] 2025-11-24 17:10:38,894 | INFO     | . stage-in = 0 s
[2025-11-24 12:11:20] 2025-11-24 17:10:38,894 | INFO     | . payload execution = 73411 s
[2025-11-24 12:11:20] 2025-11-24 17:10:38,915 | INFO     | . stage-out = 14 s
[2025-11-24 12:11:20] 2025-11-24 17:10:38,915 | INFO     | . log creation = 1 s
[2025-11-24 12:11:20] 2025-11-24 17:10:38,915 | INFO     | ..............................
[2025-11-24 12:11:20] 2025-11-24 17:10:39,089 | INFO     | time since job start (73480s) is within the limit (172800.0s)
[2025-11-24 12:11:20] 2025-11-24 17:10:39,655 | INFO     | 
[2025-11-24 12:11:20] 2025-11-24 17:10:39,655 | INFO     | job summary report
[2025-11-24 12:11:20] 2025-11-24 17:10:39,655 | INFO     | --------------------------------------------------
[2025-11-24 12:11:20] 2025-11-24 17:10:39,655 | INFO     | PanDA job id: 6895332469
[2025-11-24 12:11:20] 2025-11-24 17:10:39,655 | INFO     | task id: 47556137
[2025-11-24 12:11:20] 2025-11-24 17:10:39,655 | INFO     | errors: (none)
[2025-11-24 12:11:20] 2025-11-24 17:10:39,655 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 12:11:20] 2025-11-24 17:10:39,655 | INFO     | pilot state: finished 
[2025-11-24 12:11:20] 2025-11-24 17:10:39,655 | INFO     | transexitcode: 0
[2025-11-24 12:11:20] 2025-11-24 17:10:39,655 | INFO     | exeerrorcode: 0
[2025-11-24 12:11:20] 2025-11-24 17:10:39,656 | INFO     | exeerrordiag: 
[2025-11-24 12:11:20] 2025-11-24 17:10:39,656 | INFO     | exitcode: 0
[2025-11-24 12:11:20] 2025-11-24 17:10:39,656 | INFO     | exitmsg: OK
[2025-11-24 12:11:20] 2025-11-24 17:10:39,656 | INFO     | cpuconsumptiontime: 211143 s
[2025-11-24 12:11:20] 2025-11-24 17:10:39,656 | INFO     | nevents: 1000
[2025-11-24 12:11:20] 2025-11-24 17:10:39,656 | INFO     | neventsw: 0
[2025-11-24 12:11:20] 2025-11-24 17:10:39,656 | INFO     | pid: 2810726
[2025-11-24 12:11:20] 2025-11-24 17:10:39,656 | INFO     | pgrp: 2810726
[2025-11-24 12:11:20] 2025-11-24 17:10:39,656 | INFO     | corecount: 8
[2025-11-24 12:11:20] 2025-11-24 17:10:39,656 | INFO     | event service: False
[2025-11-24 12:11:20] 2025-11-24 17:10:39,656 | INFO     | sizes: {0: 2297979, 1: 2298835, 8: 2299097, 12: 2299125, 73425: 2358053, 73426: 2358052, 73441: 2368021, 73444: 2368077, 73461: 2368323}
[2025-11-24 12:11:20] 2025-11-24 17:10:39,656 | INFO     | --------------------------------------------------
[2025-11-24 12:11:20] 2025-11-24 17:10:39,656 | INFO     | 
[2025-11-24 12:11:20] 2025-11-24 17:10:39,656 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-24 12:11:20] 2025-11-24 17:10:39,737 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 12:11:20] 2025-11-24 17:10:39,738 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 12:11:20] 2025-11-24 17:10:39,738 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 12:11:20] 2025-11-24 17:10:39,738 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 12:11:20] 2025-11-24 17:10:39,738 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 12:11:20] 2025-11-24 17:10:39,738 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 12:11:20] 2025-11-24 17:10:39,738 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 12:11:20] 2025-11-24 17:10:39,738 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 12:11:20] 2025-11-24 17:10:39,738 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 12:11:20] 2025-11-24 17:10:39,738 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 12:11:20] 2025-11-24 17:10:39,738 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 12:11:20] 2025-11-24 17:10:39,738 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 12:11:20] 2025-11-24 17:10:39,738 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 12:11:20] 2025-11-24 17:10:39,738 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 12:11:20] 2025-11-24 17:10:39,739 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 12:11:20] 2025-11-24 17:10:39,739 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 12:11:20] 2025-11-24 17:10:39,739 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 12:11:20] 2025-11-24 17:10:39,739 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 12:11:20] 2025-11-24 17:10:39,739 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 12:11:20] 2025-11-24 17:10:39,739 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 12:11:20] 2025-11-24 17:10:39,739 | INFO     | job 6895332469 has completed (purged errors)
[2025-11-24 12:11:20] 2025-11-24 17:10:39,739 | INFO     | overall cleanup function is called
[2025-11-24 12:11:20] 2025-11-24 17:10:40,968 | INFO     | --- collectZombieJob: --- 10, [2810726]
[2025-11-24 12:11:20] 2025-11-24 17:10:40,968 | INFO     | zombie collector waiting for pid 2810726
[2025-11-24 12:11:20] 2025-11-24 17:10:40,968 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 12:11:20] 2025-11-24 17:10:40,968 | INFO     | collected zombie processes
[2025-11-24 12:11:20] 2025-11-24 17:10:40,968 | INFO     | will attempt to kill all subprocesses of pid=2810726
[2025-11-24 12:11:20] 2025-11-24 17:10:45,600 | INFO     | process IDs to be killed: [2810726] (in reverse order)
[2025-11-24 12:11:20] 2025-11-24 17:10:45,929 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 12:11:20] 2025-11-24 17:10:45,929 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 12:11:20] 2025-11-24 17:10:45,954 | INFO     | did not find any defunct processes belonging to 2810726
[2025-11-24 12:11:20] 2025-11-24 17:10:45,977 | INFO     | did not find any defunct processes belonging to 2810726
[2025-11-24 12:11:20] 2025-11-24 17:10:45,985 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 12:11:20] 2025-11-24 17:10:45,987 | INFO     | ready for new job
[2025-11-24 12:11:20] 2025-11-24 17:10:45,990 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 12:11:20] 2025-11-24 17:10:46,028 | INFO     | ***************************************
[2025-11-24 12:11:20] 2025-11-24 17:10:46,031 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 12:11:20] 2025-11-24 17:10:46,031 | INFO     | ***************************************
[2025-11-24 12:11:20] 2025-11-24 17:10:46,031 | INFO     | 
[2025-11-24 12:11:20] 2025-11-24 17:10:46,067 | INFO     | architecture information:
[2025-11-24 12:11:20] 2025-11-24 17:10:46,075 | INFO     | executing command: cat /etc/os-release
[2025-11-24 12:11:20] 2025-11-24 17:10:46,131 | INFO     | cat /etc/os-release:
[2025-11-24 12:11:20] NAME="CentOS Linux"
[2025-11-24 12:11:20] VERSION="7 (Core)"
[2025-11-24 12:11:20] ID="centos"
[2025-11-24 12:11:20] ID_LIKE="rhel fedora"
[2025-11-24 12:11:20] VERSION_ID="7"
[2025-11-24 12:11:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 12:11:20] ANSI_COLOR="0;31"
[2025-11-24 12:11:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 12:11:20] HOME_URL="https://www.centos.org/"
[2025-11-24 12:11:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 12:11:20] 
[2025-11-24 12:11:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 12:11:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 12:11:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 12:11:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 12:11:20] 
[2025-11-24 12:11:20] 2025-11-24 17:10:46,132 | INFO     | ***************************************
[2025-11-24 12:11:20] 2025-11-24 17:10:46,641 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-24 12:11:20] 2025-11-24 17:10:46,747 | INFO     | sufficient remaining disk space (65973256192 B)
[2025-11-24 12:11:20] 2025-11-24 17:10:46,747 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 12:11:20] 2025-11-24 17:10:46,747 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 12:11:20] 2025-11-24 17:10:46,748 | INFO     | update_server=False
[2025-11-24 12:11:20] 2025-11-24 17:10:46,748 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 12:11:20] 2025-11-24 17:10:46,748 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 12:11:20] 2025-11-24 17:10:46,749 | INFO     | aborting loop
[2025-11-24 12:11:20] 2025-11-24 17:10:46,753 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 12:11:20] 2025-11-24 17:10:47,081 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 12:11:20] 2025-11-24 17:10:47,755 | INFO     | [job] job monitor thread has finished
[2025-11-24 12:11:20] 2025-11-24 17:10:47,774 | INFO     | [job] retrieve thread has finished
[2025-11-24 12:11:20] 2025-11-24 17:10:47,784 | INFO     | all data control threads have been joined
[2025-11-24 12:11:20] 2025-11-24 17:10:47,864 | INFO     | [job] validate thread has finished
[2025-11-24 12:11:20] 2025-11-24 17:10:47,865 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 12:11:20] 2025-11-24 17:10:47,874 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 12:11:20] 2025-11-24 17:10:48,011 | INFO     | all job control threads have been joined
[2025-11-24 12:11:20] 2025-11-24 17:10:48,038 | INFO     | [payload] validate_post thread has finished
[2025-11-24 12:11:20] 2025-11-24 17:10:48,121 | INFO     | all payload control threads have been joined
[2025-11-24 12:11:20] 2025-11-24 17:10:48,304 | INFO     | [data] copytool_in thread has finished
[2025-11-24 12:11:20] 2025-11-24 17:10:48,337 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 12:11:20] 2025-11-24 17:10:48,354 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 12:11:20] 2025-11-24 17:10:48,723 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 12:11:20] 2025-11-24 17:10:48,784 | INFO     | [data] copytool_out thread has finished
[2025-11-24 12:11:20] 2025-11-24 17:10:48,808 | INFO     | [data] control thread has finished
[2025-11-24 12:11:20] 2025-11-24 17:10:48,835 | INFO     | [payload] failed_post thread has finished
[2025-11-24 12:11:20] 2025-11-24 17:10:49,017 | INFO     | [job] control thread has finished
[2025-11-24 12:11:20] 2025-11-24 17:10:49,127 | INFO     | [payload] control thread has finished
[2025-11-24 12:11:20] 2025-11-24 17:10:49,743 | INFO     | [job] queue monitor thread has finished
[2025-11-24 12:11:20] 2025-11-24 17:10:51,099 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 12:11:20] 2025-11-24 17:11:11,422 | INFO     | [monitor] cgroup control has ended
[2025-11-24 12:11:20] 2025-11-24 17:11:12,301 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139809992783680)>', '<ExcThread(monitor, started 139809364371200)>']
[2025-11-24 12:11:20] 2025-11-24 17:11:17,289 | INFO     | PID=2796104 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 12:11:20] 2025-11-24 17:11:17,289 | INFO     | .. there are 43 such processes running
[2025-11-24 12:11:20] 2025-11-24 17:11:17,289 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 12:11:20] 2025-11-24 17:11:17,289 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 12:11:20] 2025-11-24 17:11:17,289 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 12:11:20] 2025-11-24 17:11:17,290 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 12:11:20] 2025-11-24 17:11:17,290 | INFO     | [monitor] control thread has ended
[2025-11-24 12:11:20] 2025-11-24 17:11:17,350 | INFO     | all workflow threads have been joined
[2025-11-24 12:11:20] 2025-11-24 17:11:17,350 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 12:11:20] 2025-11-24 17:11:17,350 | INFO     | traces error code: 0
[2025-11-24 12:11:20] 2025-11-24 17:11:17,350 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 12:11:20] 2025-11-24 17:11:20,074 [wrapper] ==== pilot stdout END ====
[2025-11-24 12:11:20] 2025-11-24 17:11:20,083 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 12:11:20] 2025-11-24 17:11:20,101 [wrapper] pilotpid: 2796104
[2025-11-24 12:11:20] 2025-11-24 17:11:20,125 [wrapper] Pilot exit status: 0
[2025-11-24 12:11:20] 2025-11-24 17:11:20,287 [wrapper] pandaids: 6895332469
[2025-11-24 12:11:20] 2025-11-24 17:11:20,447 [wrapper] cleanup supervisor_pilot 3689227 2796105
[2025-11-24 12:11:20] 2025-11-24 17:11:20,477 [wrapper] Test setup, not cleaning
[2025-11-24 12:11:20] 2025-11-24 17:11:20,503 [wrapper] apfmon messages muted
[2025-11-24 12:11:20] 2025-11-24 17:11:20,516 [wrapper] ==== wrapper stdout END ====
[2025-11-24 12:11:20] 2025-11-24 17:11:20,528 [wrapper] ==== wrapper stderr END ====
[2025-11-24 12:11:20]  *** Error codes and diagnostics ***
[2025-11-24 12:11:20]     "exeErrorCode": 0,
[2025-11-24 12:11:20]     "exeErrorDiag": "",
[2025-11-24 12:11:20]     "pilotErrorCode": 0,
[2025-11-24 12:11:20]     "pilotErrorDiag": "",
[2025-11-24 12:11:20]  *** Listing of results directory ***
[2025-11-24 12:11:20] total 1339428
[2025-11-24 12:11:20] -rwx------. 1 boincer umatlas     36292 Nov 21 19:25 runpilot2-wrapper.sh
[2025-11-24 12:11:20] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 19:25 queuedata.json
[2025-11-24 12:11:20] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 19:25 pilot3.tar.gz
[2025-11-24 12:11:20] -rw-r--r--. 1 boincer umatlas       100 Nov 23 15:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 12:11:20] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 15:45 run_atlas
[2025-11-24 12:11:20] -rw-r--r--. 1 boincer umatlas       105 Nov 23 15:45 job.xml
[2025-11-24 12:11:20] -rw-r--r--. 2 boincer umatlas 413417352 Nov 23 15:45 EVNT.47483658._000190.pool.root.1
[2025-11-24 12:11:20] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 15:45 start_atlas.sh
[2025-11-24 12:11:20] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 15:45 shared
[2025-11-24 12:11:20] -rw-r--r--. 2 boincer umatlas    590091 Nov 23 15:45 input.tar.gz
[2025-11-24 12:11:20] -rw-r--r--. 1 boincer umatlas         0 Nov 23 15:45 boinc_lockfile
[2025-11-24 12:11:20] -rw-r--r--. 1 boincer umatlas      2786 Nov 23 15:45 pandaJob.out
[2025-11-24 12:11:20] -rw-------. 1 boincer umatlas        57 Nov 23 15:45 setup.sh.local
[2025-11-24 12:11:20] -rw-------. 1 boincer umatlas    989786 Nov 23 15:45 agis_schedconf.cvmfs.json
[2025-11-24 12:11:20] drwx------. 5 boincer umatlas      4096 Nov 23 15:45 pilot3
[2025-11-24 12:11:20] -rw-r--r--. 1 boincer umatlas       533 Nov 24 11:39 boinc_task_state.xml
[2025-11-24 12:11:20] -rw-------. 1 boincer umatlas 931992265 Nov 24 12:08 HITS.47556137._001900.pool.root.1
[2025-11-24 12:11:20] -rw-------. 1 boincer umatlas      1061 Nov 24 12:09 memory_monitor_summary.json
[2025-11-24 12:11:20] -rw-------. 1 boincer umatlas   1516227 Nov 24 12:10 agis_ddmendpoints.agis.ALL.json
[2025-11-24 12:11:20] -rw-------. 1 boincer umatlas   2256502 Nov 24 12:10 log.47556137._001900.job.log.tgz.1
[2025-11-24 12:11:20] -rw-------. 1 boincer umatlas        95 Nov 24 12:10 pilot_heartbeat.json
[2025-11-24 12:11:20] -rw-------. 1 boincer umatlas      8603 Nov 24 12:10 heartbeat.json
[2025-11-24 12:11:20] -rw-r--r--. 1 boincer umatlas      6948 Nov 24 12:10 init_data.xml
[2025-11-24 12:11:20] -rw-------. 1 boincer umatlas      4824 Nov 24 12:11 pilotlog.txt
[2025-11-24 12:11:20] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 12:11 boinc_mmap_file
[2025-11-24 12:11:20] -rw-r--r--. 1 boincer umatlas        29 Nov 24 12:11 wrapper_checkpoint.txt
[2025-11-24 12:11:20] -rw-------. 1 boincer umatlas   8868758 Nov 24 12:11 log.47556137._001900.job.log.1
[2025-11-24 12:11:20] -rw-------. 1 boincer umatlas       353 Nov 24 12:11 output.list
[2025-11-24 12:11:20] -rw-r--r--. 1 boincer umatlas       620 Nov 24 12:11 runtime_log
[2025-11-24 12:11:20] -rw-------. 1 boincer umatlas  11141120 Nov 24 12:11 result.tar.gz
[2025-11-24 12:11:20] -rw-------. 1 boincer umatlas       663 Nov 24 12:11 W6RKDm8bqg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmisHKDmdEz1jm.diag
[2025-11-24 12:11:20] -rw-r--r--. 1 boincer umatlas      9338 Nov 24 12:11 runtime_log.err
[2025-11-24 12:11:20] -rw-r--r--. 1 boincer umatlas     21871 Nov 24 12:11 stderr.txt
[2025-11-24 12:11:20] HITS file was successfully produced:
[2025-11-24 12:11:20] -rw-------. 1 boincer umatlas 931992265 Nov 24 12:08 shared/HITS.pool.root.1
[2025-11-24 12:11:20]  *** Contents of shared directory: ***
[2025-11-24 12:11:20] total 1325364
[2025-11-24 12:11:20] -rw-r--r--. 2 boincer umatlas 413417352 Nov 23 15:45 ATLAS.root_0
[2025-11-24 12:11:20] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 15:45 start_atlas.sh
[2025-11-24 12:11:20] -rw-r--r--. 2 boincer umatlas    590091 Nov 23 15:45 input.tar.gz
[2025-11-24 12:11:20] -rw-------. 1 boincer umatlas 931992265 Nov 24 12:08 HITS.pool.root.1
[2025-11-24 12:11:20] -rw-------. 1 boincer umatlas  11141120 Nov 24 12:11 result.tar.gz
12:11:22 (2787789): run_atlas exited; CPU time 212648.627993
12:11:22 (2787789): called boinc_finish(0)

</stderr_txt>
]]>

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