Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:48:41 (3527573): wrapper (7.7.26015): starting
08:48:41 (3527573): wrapper: running run_atlas (--nthreads 2)
[2025-11-26 08:48:41] Arguments: --nthreads 2
[2025-11-26 08:48:41] Threads: 2
[2025-11-26 08:48:41] Checking for CVMFS
[2025-11-26 08:48:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 08:48:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 08:48:41] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 08:48:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 08:48:41] 2.9.2.0 2243680 11019 59404 153314 1 81 8247602 36864000 0 130560 2 3553979 99.844 665833 735 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 08:48:41] CVMFS is ok
[2025-11-26 08:48:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 08:48:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 08:48:41] Further information can be found at the LHC@home message board.
[2025-11-26 08:48:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 08:48:41] Checking for apptainer binary...
[2025-11-26 08:48:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 08:48:41] Running /usr/bin/apptainer --version
[2025-11-26 08:48:41] apptainer version 1.4.1-1.1
[2025-11-26 08:48:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 08:48:42] belleA263
[2025-11-26 08:48:42] apptainer works
[2025-11-26 08:48:42] Set ATHENA_PROC_NUMBER=2
[2025-11-26 08:48:42] Set ATHENA_CORE_NUMBER=2
[2025-11-26 08:48:42] Starting ATLAS job with PandaID=6895339990
[2025-11-26 08:48:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 20:38:59]  *** The last 200 lines of the pilot log: ***
[2025-11-26 20:38:59] 2025-11-26 19:37:55,198 | INFO     | total number of processed events: 1000 (read)
[2025-11-26 20:38:59] 2025-11-26 19:37:55,200 | INFO     | executing command: lscpu
[2025-11-26 20:38:59] 2025-11-26 19:37:55,214 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-26 20:38:59] 2025-11-26 19:37:55,553 | INFO     | time since job start (42541s) is within the limit (172800.0s)
[2025-11-26 20:38:59] 2025-11-26 19:37:57,559 | INFO     | time since job start (42543s) is within the limit (172800.0s)
[2025-11-26 20:38:59] 2025-11-26 19:37:57,695 | INFO     | monitor loop #3243: job 0:6895339990 is in state 'finished'
[2025-11-26 20:38:59] 2025-11-26 19:37:57,695 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 20:38:59] 2025-11-26 19:37:59,564 | INFO     | time since job start (42545s) is within the limit (172800.0s)
[2025-11-26 20:38:59] 2025-11-26 19:38:00,200 | INFO     | monitor loop #3244: job 0:6895339990 is in state 'finished'
[2025-11-26 20:38:59] 2025-11-26 19:38:00,200 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 20:38:59] 2025-11-26 19:38:01,466 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 20:38:59] 2025-11-26 19:38:01,467 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 3854.1645000000003
[2025-11-26 20:38:59] 2025-11-26 19:38:01,467 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6895339990/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 20:38:59] 2025-11-26 19:38:01,468 | INFO     | extracted standard info from prmon json
[2025-11-26 20:38:59] 2025-11-26 19:38:01,468 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 20:38:59] 2025-11-26 19:38:01,468 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 20:38:59] 2025-11-26 19:38:01,472 | INFO     | fitting pss+swap vs Time
[2025-11-26 20:38:59] 2025-11-26 19:38:01,472 | INFO     | sum of square deviations: 104996751908.0
[2025-11-26 20:38:59] 2025-11-26 19:38:01,477 | INFO     | sum of deviations: 276901503448.99744
[2025-11-26 20:38:59] 2025-11-26 19:38:01,477 | INFO     | mean x: 1764164589.0
[2025-11-26 20:38:59] 2025-11-26 19:38:01,477 | INFO     | mean y: 2026600.418938307
[2025-11-26 20:38:59] 2025-11-26 19:38:01,477 | INFO     | intersect: -4650496626.714933
[2025-11-26 20:38:59] 2025-11-26 19:38:01,477 | INFO     | chi2: 3.055343987797721
[2025-11-26 20:38:59] 2025-11-26 19:38:01,477 | INFO     | sum of square deviations: 102753305193.0
[2025-11-26 20:38:59] 2025-11-26 19:38:01,482 | INFO     | sum of deviations: 327229071976.00006
[2025-11-26 20:38:59] 2025-11-26 19:38:01,482 | INFO     | mean x: 1764164436.5
[2025-11-26 20:38:59] 2025-11-26 19:38:01,482 | INFO     | mean y: 2030006.5231213872
[2025-11-26 20:38:59] 2025-11-26 19:38:01,482 | INFO     | intersect: -5616143445.753188
[2025-11-26 20:38:59] 2025-11-26 19:38:01,482 | INFO     | chi2: 2.309967132686079
[2025-11-26 20:38:59] 2025-11-26 19:38:01,482 | INFO     | current chi2=2.309967132686079 (change=24.395840798564443 %)
[2025-11-26 20:38:59] 2025-11-26 19:38:01,482 | INFO     | right removable region: 691
[2025-11-26 20:38:59] 2025-11-26 19:38:01,483 | INFO     | sum of square deviations: 102753305193.0
[2025-11-26 20:38:59] 2025-11-26 19:38:01,487 | INFO     | sum of deviations: 149102363287.49997
[2025-11-26 20:38:59] 2025-11-26 19:38:01,487 | INFO     | mean x: 1764164741.5
[2025-11-26 20:38:59] 2025-11-26 19:38:01,487 | INFO     | mean y: 2035277.1748554914
[2025-11-26 20:38:59] 2025-11-26 19:38:01,487 | INFO     | intersect: -2557893395.6018033
[2025-11-26 20:38:59] 2025-11-26 19:38:01,487 | INFO     | chi2: 1.090858868503984
[2025-11-26 20:38:59] 2025-11-26 19:38:01,487 | INFO     | current chi2=1.090858868503984 (change=64.29669219372349 %)
[2025-11-26 20:38:59] 2025-11-26 19:38:01,488 | INFO     | sum of square deviations: 100542045128.0
[2025-11-26 20:38:59] 2025-11-26 19:38:01,492 | INFO     | sum of deviations: 110183123188.00003
[2025-11-26 20:38:59] 2025-11-26 19:38:01,492 | INFO     | mean x: 1764164894.0
[2025-11-26 20:38:59] 2025-11-26 19:38:01,492 | INFO     | mean y: 2037952.6477438137
[2025-11-26 20:38:59] 2025-11-26 19:38:01,492 | INFO     | intersect: -1931294491.426578
[2025-11-26 20:38:59] 2025-11-26 19:38:01,492 | INFO     | chi2: 0.8239922207833976
[2025-11-26 20:38:59] 2025-11-26 19:38:01,492 | INFO     | current chi2=0.8239922207833976 (change=24.46390229073081 %)
[2025-11-26 20:38:59] 2025-11-26 19:38:01,492 | INFO     | left removable region: 20
[2025-11-26 20:38:59] 2025-11-26 19:38:01,493 | INFO     | sum of square deviations: 93679598320.0
[2025-11-26 20:38:59] 2025-11-26 19:38:01,497 | INFO     | sum of deviations: 146135151237.0
[2025-11-26 20:38:59] 2025-11-26 19:38:01,497 | INFO     | mean x: 1764165016.0
[2025-11-26 20:38:59] 2025-11-26 19:38:01,497 | INFO     | mean y: 2042531.435171386
[2025-11-26 20:38:59] 2025-11-26 19:38:01,497 | INFO     | intersect: -2749960317.0350323
[2025-11-26 20:38:59] 2025-11-26 19:38:01,497 | INFO     | chi2: 0.07101185793941348
[2025-11-26 20:38:59] 2025-11-26 19:38:01,497 | INFO     | current memory leak: 1.56 B/s (using 671 data points, chi2=0.07)
[2025-11-26 20:38:59] 2025-11-26 19:38:01,497 | INFO     | could have reported an average CPU frequency of 4539 MHz (27 samples)
[2025-11-26 20:38:59] 2025-11-26 19:38:01,497 | INFO     | ..............................
[2025-11-26 20:38:59] 2025-11-26 19:38:01,498 | INFO     | . Timing measurements:
[2025-11-26 20:38:59] 2025-11-26 19:38:01,498 | INFO     | . get job = 0 s
[2025-11-26 20:38:59] 2025-11-26 19:38:01,498 | INFO     | . initial setup = 1 s
[2025-11-26 20:38:59] 2025-11-26 19:38:01,498 | INFO     | . payload setup = 7 s
[2025-11-26 20:38:59] 2025-11-26 19:38:01,498 | INFO     | . stage-in = 0 s
[2025-11-26 20:38:59] 2025-11-26 19:38:01,498 | INFO     | . payload execution = 42510 s
[2025-11-26 20:38:59] 2025-11-26 19:38:01,498 | INFO     | . stage-out = 1 s
[2025-11-26 20:38:59] 2025-11-26 19:38:01,498 | INFO     | . log creation = 0 s
[2025-11-26 20:38:59] 2025-11-26 19:38:01,498 | INFO     | ..............................
[2025-11-26 20:38:59] 2025-11-26 19:38:01,526 | INFO     | 
[2025-11-26 20:38:59] 2025-11-26 19:38:01,526 | INFO     | job summary report
[2025-11-26 20:38:59] 2025-11-26 19:38:01,526 | INFO     | --------------------------------------------------
[2025-11-26 20:38:59] 2025-11-26 19:38:01,526 | INFO     | PanDA job id: 6895339990
[2025-11-26 20:38:59] 2025-11-26 19:38:01,526 | INFO     | task id: 47556149
[2025-11-26 20:38:59] 2025-11-26 19:38:01,526 | INFO     | errors: (none)
[2025-11-26 20:38:59] 2025-11-26 19:38:01,526 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 20:38:59] 2025-11-26 19:38:01,526 | INFO     | pilot state: finished 
[2025-11-26 20:38:59] 2025-11-26 19:38:01,526 | INFO     | transexitcode: 0
[2025-11-26 20:38:59] 2025-11-26 19:38:01,526 | INFO     | exeerrorcode: 0
[2025-11-26 20:38:59] 2025-11-26 19:38:01,526 | INFO     | exeerrordiag: 
[2025-11-26 20:38:59] 2025-11-26 19:38:01,526 | INFO     | exitcode: 0
[2025-11-26 20:38:59] 2025-11-26 19:38:01,527 | INFO     | exitmsg: OK
[2025-11-26 20:38:59] 2025-11-26 19:38:01,527 | INFO     | cpuconsumptiontime: 84138 s
[2025-11-26 20:38:59] 2025-11-26 19:38:01,527 | INFO     | nevents: 1000
[2025-11-26 20:38:59] 2025-11-26 19:38:01,527 | INFO     | neventsw: 0
[2025-11-26 20:38:59] 2025-11-26 19:38:01,527 | INFO     | pid: 3537706
[2025-11-26 20:38:59] 2025-11-26 19:38:01,527 | INFO     | pgrp: 3537706
[2025-11-26 20:38:59] 2025-11-26 19:38:01,527 | INFO     | corecount: 2
[2025-11-26 20:38:59] 2025-11-26 19:38:01,527 | INFO     | event service: False
[2025-11-26 20:38:59] 2025-11-26 19:38:01,527 | INFO     | sizes: {0: 2284314, 6: 2284576, 10: 2284604, 42520: 2330127, 42521: 2339127, 42522: 2339183, 42530: 2339557}
[2025-11-26 20:38:59] 2025-11-26 19:38:01,527 | INFO     | --------------------------------------------------
[2025-11-26 20:38:59] 2025-11-26 19:38:01,527 | INFO     | 
[2025-11-26 20:38:59] 2025-11-26 19:38:01,527 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-26 20:38:59] 2025-11-26 19:38:01,536 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 20:38:59] 2025-11-26 19:38:01,537 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 20:38:59] 2025-11-26 19:38:01,537 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 20:38:59] 2025-11-26 19:38:01,537 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 20:38:59] 2025-11-26 19:38:01,537 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 20:38:59] 2025-11-26 19:38:01,537 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 20:38:59] 2025-11-26 19:38:01,537 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 20:38:59] 2025-11-26 19:38:01,537 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 20:38:59] 2025-11-26 19:38:01,537 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 20:38:59] 2025-11-26 19:38:01,537 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 20:38:59] 2025-11-26 19:38:01,537 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 20:38:59] 2025-11-26 19:38:01,537 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 20:38:59] 2025-11-26 19:38:01,537 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 20:38:59] 2025-11-26 19:38:01,537 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 20:38:59] 2025-11-26 19:38:01,537 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 20:38:59] 2025-11-26 19:38:01,537 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 20:38:59] 2025-11-26 19:38:01,537 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 20:38:59] 2025-11-26 19:38:01,537 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 20:38:59] 2025-11-26 19:38:01,537 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 20:38:59] 2025-11-26 19:38:01,537 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 20:38:59] 2025-11-26 19:38:01,537 | INFO     | job 6895339990 has completed (purged errors)
[2025-11-26 20:38:59] 2025-11-26 19:38:01,537 | INFO     | overall cleanup function is called
[2025-11-26 20:38:59] 2025-11-26 19:38:02,544 | INFO     | --- collectZombieJob: --- 10, [3537706]
[2025-11-26 20:38:59] 2025-11-26 19:38:02,545 | INFO     | zombie collector waiting for pid 3537706
[2025-11-26 20:38:59] 2025-11-26 19:38:02,545 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 20:38:59] 2025-11-26 19:38:02,545 | INFO     | collected zombie processes
[2025-11-26 20:38:59] 2025-11-26 19:38:02,545 | INFO     | will attempt to kill all subprocesses of pid=3537706
[2025-11-26 20:38:59] 2025-11-26 19:38:02,577 | INFO     | process IDs to be killed: [3537706] (in reverse order)
[2025-11-26 20:38:59] 2025-11-26 19:38:02,597 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 20:38:59] 2025-11-26 19:38:02,597 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 20:38:59] 2025-11-26 19:38:02,597 | INFO     | did not find any defunct processes belonging to 3537706
[2025-11-26 20:38:59] 2025-11-26 19:38:02,598 | INFO     | did not find any defunct processes belonging to 3537706
[2025-11-26 20:38:59] 2025-11-26 19:38:02,599 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 20:38:59] 2025-11-26 19:38:02,599 | INFO     | ready for new job
[2025-11-26 20:38:59] 2025-11-26 19:38:02,599 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 20:38:59] 2025-11-26 19:38:02,600 | INFO     | ***************************************
[2025-11-26 20:38:59] 2025-11-26 19:38:02,600 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 20:38:59] 2025-11-26 19:38:02,600 | INFO     | ***************************************
[2025-11-26 20:38:59] 2025-11-26 19:38:02,600 | INFO     | 
[2025-11-26 20:38:59] 2025-11-26 19:38:02,600 | INFO     | architecture information:
[2025-11-26 20:38:59] 2025-11-26 19:38:02,600 | INFO     | executing command: cat /etc/os-release
[2025-11-26 20:38:59] 2025-11-26 19:38:02,608 | INFO     | cat /etc/os-release:
[2025-11-26 20:38:59] NAME="CentOS Linux"
[2025-11-26 20:38:59] VERSION="7 (Core)"
[2025-11-26 20:38:59] ID="centos"
[2025-11-26 20:38:59] ID_LIKE="rhel fedora"
[2025-11-26 20:38:59] VERSION_ID="7"
[2025-11-26 20:38:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 20:38:59] ANSI_COLOR="0;31"
[2025-11-26 20:38:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 20:38:59] HOME_URL="https://www.centos.org/"
[2025-11-26 20:38:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 20:38:59] 
[2025-11-26 20:38:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 20:38:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 20:38:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 20:38:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 20:38:59] 
[2025-11-26 20:38:59] 2025-11-26 19:38:02,608 | INFO     | ***************************************
[2025-11-26 20:38:59] 2025-11-26 19:38:03,112 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-26 20:38:59] 2025-11-26 19:38:03,123 | INFO     | sufficient remaining disk space (624938713088 B)
[2025-11-26 20:38:59] 2025-11-26 19:38:03,123 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 20:38:59] 2025-11-26 19:38:03,124 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 20:38:59] 2025-11-26 19:38:03,124 | INFO     | update_server=False
[2025-11-26 20:38:59] 2025-11-26 19:38:03,124 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 20:38:59] 2025-11-26 19:38:03,124 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 20:38:59] 2025-11-26 19:38:03,342 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 20:38:59] 2025-11-26 19:38:03,709 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 20:38:59] 2025-11-26 19:38:03,709 | INFO     | aborting loop
[2025-11-26 20:38:59] 2025-11-26 19:38:03,965 | INFO     | all job control threads have been joined
[2025-11-26 20:38:59] 2025-11-26 19:38:03,975 | INFO     | all payload control threads have been joined
[2025-11-26 20:38:59] 2025-11-26 19:38:04,065 | INFO     | all data control threads have been joined
[2025-11-26 20:38:59] 2025-11-26 19:38:04,129 | INFO     | [job] queue monitor thread has finished
[2025-11-26 20:38:59] 2025-11-26 19:38:04,130 | INFO     | [job] retrieve thread has finished
[2025-11-26 20:38:59] 2025-11-26 19:38:04,181 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 20:38:59] 2025-11-26 19:38:04,633 | INFO     | [data] copytool_in thread has finished
[2025-11-26 20:38:59] 2025-11-26 19:38:04,708 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 20:38:59] 2025-11-26 19:38:04,714 | INFO     | [job] job monitor thread has finished
[2025-11-26 20:38:59] 2025-11-26 19:38:04,971 | INFO     | [job] control thread has finished
[2025-11-26 20:38:59] 2025-11-26 19:38:04,981 | INFO     | [payload] control thread has finished
[2025-11-26 20:38:59] 2025-11-26 19:38:05,015 | INFO     | [payload] failed_post thread has finished
[2025-11-26 20:38:59] 2025-11-26 19:38:05,070 | INFO     | [data] control thread has finished
[2025-11-26 20:38:59] 2025-11-26 19:38:05,348 | INFO     | [data] copytool_out thread has finished
[2025-11-26 20:38:59] 2025-11-26 19:38:05,539 | INFO     | [job] validate thread has finished
[2025-11-26 20:38:59] 2025-11-26 19:38:05,579 | INFO     | [payload] validate_post thread has finished
[2025-11-26 20:38:59] 2025-11-26 19:38:05,595 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 20:38:59] 2025-11-26 19:38:05,625 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 20:38:59] 2025-11-26 19:38:08,185 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 20:38:59] 2025-11-26 19:38:13,918 | INFO     | job.realtimelogging is not enabled
[2025-11-26 20:38:59] 2025-11-26 19:38:14,924 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 20:38:59] 2025-11-26 19:38:32,683 | INFO     | PID=3531284 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 20:38:59] 2025-11-26 19:38:32,683 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 20:38:59] 2025-11-26 19:38:32,683 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 20:38:59] 2025-11-26 19:38:32,683 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 20:38:59] 2025-11-26 19:38:53,430 | INFO     | [monitor] cgroup control has ended
[2025-11-26 20:38:59] 2025-11-26 19:38:54,817 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140083028354880)>', '<ExcThread(monitor, started 140082237404928)>']
[2025-11-26 20:38:59] 2025-11-26 19:38:55,806 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 20:38:59] 2025-11-26 19:38:55,807 | INFO     | [monitor] control thread has ended
[2025-11-26 20:38:59] 2025-11-26 19:38:59,843 | INFO     | all workflow threads have been joined
[2025-11-26 20:38:59] 2025-11-26 19:38:59,843 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 20:38:59] 2025-11-26 19:38:59,843 | INFO     | traces error code: 0
[2025-11-26 20:38:59] 2025-11-26 19:38:59,844 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 20:38:59] 2025-11-26 19:38:59,886 [wrapper] ==== pilot stdout END ====
[2025-11-26 20:38:59] 2025-11-26 19:38:59,889 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 20:38:59] 2025-11-26 19:38:59,891 [wrapper] pilotpid: 3531284
[2025-11-26 20:38:59] 2025-11-26 19:38:59,893 [wrapper] Pilot exit status: 0
[2025-11-26 20:38:59] 2025-11-26 19:38:59,899 [wrapper] pandaids: 6895339990
[2025-11-26 20:38:59] 2025-11-26 19:38:59,911 [wrapper] cleanup supervisor_pilot 3609530 3531285
[2025-11-26 20:38:59] 2025-11-26 19:38:59,914 [wrapper] Test setup, not cleaning
[2025-11-26 20:38:59] 2025-11-26 19:38:59,916 [wrapper] apfmon messages muted
[2025-11-26 20:38:59] 2025-11-26 19:38:59,918 [wrapper] ==== wrapper stdout END ====
[2025-11-26 20:38:59] 2025-11-26 19:38:59,920 [wrapper] ==== wrapper stderr END ====
[2025-11-26 20:38:59]  *** Error codes and diagnostics ***
[2025-11-26 20:38:59]     "exeErrorCode": 0,
[2025-11-26 20:38:59]     "exeErrorDiag": "",
[2025-11-26 20:38:59]     "pilotErrorCode": 0,
[2025-11-26 20:38:59]     "pilotErrorDiag": "",
[2025-11-26 20:38:59]  *** Listing of results directory ***
[2025-11-26 20:38:59] total 1299344
[2025-11-26 20:38:59] -rw-r--r-- 1 boinc boinc    576529 Nov 22 13:20 pilot3.tar.gz
[2025-11-26 20:38:59] -rw-r--r-- 1 boinc boinc      5112 Nov 22 13:25 queuedata.json
[2025-11-26 20:38:59] -rwx------ 1 boinc boinc     36292 Nov 22 13:26 runpilot2-wrapper.sh
[2025-11-26 20:38:59] -rw-r--r-- 1 boinc boinc       100 Nov 26 08:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 20:38:59] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 08:48 run_atlas
[2025-11-26 20:38:59] -rw-r--r-- 1 boinc boinc       105 Nov 26 08:48 job.xml
[2025-11-26 20:38:59] -rw-r--r-- 2 boinc boinc 406826777 Nov 26 08:48 EVNT.47483658._001087.pool.root.1
[2025-11-26 20:38:59] -rw-r--r-- 2 boinc boinc    590107 Nov 26 08:48 input.tar.gz
[2025-11-26 20:38:59] -rw-r--r-- 2 boinc boinc     15847 Nov 26 08:48 start_atlas.sh
[2025-11-26 20:38:59] drwxrwx--x 2 boinc boinc      4096 Nov 26 08:48 shared
[2025-11-26 20:38:59] -rw-r--r-- 1 boinc boinc         0 Nov 26 08:48 boinc_setup_complete
[2025-11-26 20:38:59] -rw-r--r-- 1 boinc boinc      6207 Nov 26 08:48 init_data.xml
[2025-11-26 20:38:59] -rw-r--r-- 1 boinc boinc         0 Nov 26 08:48 boinc_lockfile
[2025-11-26 20:38:59] -rw-r--r-- 1 boinc boinc      2783 Nov 26 08:48 pandaJob.out
[2025-11-26 20:38:59] -rw------- 1 boinc boinc    991877 Nov 26 08:48 agis_schedconf.cvmfs.json
[2025-11-26 20:38:59] drwx------ 5 boinc boinc      4096 Nov 26 08:48 pilot3
[2025-11-26 20:38:59] -rw-r--r-- 1 boinc boinc       531 Nov 26 20:35 boinc_task_state.xml
[2025-11-26 20:38:59] -rw------- 1 boinc boinc 905464919 Nov 26 20:37 HITS.47556149._000735.pool.root.1
[2025-11-26 20:38:59] -rw------- 1 boinc boinc      1022 Nov 26 20:37 memory_monitor_summary.json
[2025-11-26 20:38:59] -rw------- 1 boinc boinc   1516240 Nov 26 20:37 agis_ddmendpoints.agis.ALL.json
[2025-11-26 20:38:59] -rw------- 1 boinc boinc   1196603 Nov 26 20:37 log.47556149._000735.job.log.tgz.1
[2025-11-26 20:38:59] -rw------- 1 boinc boinc      8563 Nov 26 20:38 heartbeat.json
[2025-11-26 20:38:59] -rw------- 1 boinc boinc        95 Nov 26 20:38 pilot_heartbeat.json
[2025-11-26 20:38:59] -rw-r--r-- 1 boinc boinc        28 Nov 26 20:38 wrapper_checkpoint.txt
[2025-11-26 20:38:59] -rw-r--r-- 1 boinc boinc      8192 Nov 26 20:38 boinc_mmap_file
[2025-11-26 20:38:59] -rw------- 1 boinc boinc      4824 Nov 26 20:38 pilotlog.txt
[2025-11-26 20:38:59] -rw------- 1 boinc boinc   5964358 Nov 26 20:38 log.47556149._000735.job.log.1
[2025-11-26 20:38:59] -rw------- 1 boinc boinc       353 Nov 26 20:38 output.list
[2025-11-26 20:38:59] -rw-r--r-- 1 boinc boinc       620 Nov 26 20:38 runtime_log
[2025-11-26 20:38:59] -rw------- 1 boinc boinc   7178240 Nov 26 20:38 result.tar.gz
[2025-11-26 20:38:59] -rw------- 1 boinc boinc       668 Nov 26 20:38 siaKDmZs1g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmF9JKDmMXHazn.diag
[2025-11-26 20:38:59] -rw-r--r-- 1 boinc boinc      8913 Nov 26 20:38 runtime_log.err
[2025-11-26 20:38:59] -rw-r--r-- 1 boinc boinc     21500 Nov 26 20:38 stderr.txt
[2025-11-26 20:39:00] HITS file was successfully produced:
[2025-11-26 20:39:00] -rw------- 1 boinc boinc 905464919 Nov 26 20:37 shared/HITS.pool.root.1
[2025-11-26 20:39:00]  *** Contents of shared directory: ***
[2025-11-26 20:39:00] total 1289148
[2025-11-26 20:39:00] -rw-r--r-- 2 boinc boinc 406826777 Nov 26 08:48 ATLAS.root_0
[2025-11-26 20:39:00] -rw-r--r-- 2 boinc boinc    590107 Nov 26 08:48 input.tar.gz
[2025-11-26 20:39:00] -rw-r--r-- 2 boinc boinc     15847 Nov 26 08:48 start_atlas.sh
[2025-11-26 20:39:00] -rw------- 1 boinc boinc 905464919 Nov 26 20:37 HITS.pool.root.1
[2025-11-26 20:39:00] -rw------- 1 boinc boinc   7178240 Nov 26 20:38 result.tar.gz
20:39:01 (3527573): run_atlas exited; CPU time 84255.675510
20:39:01 (3527573): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN