Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:10:17 (3618041): wrapper (7.7.26015): starting
17:10:17 (3618041): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 17:10:17] Arguments: --nthreads 8
[2025-11-23 17:10:17] Threads: 8
[2025-11-23 17:10:17] Checking for CVMFS
[2025-11-23 17:10:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 17:10:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 17:10:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 17:10:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 17:10:18] 2.13.2.0 5986 31856 359724 153221 1 224 40236892 40960001 12896 16776704 0 62439140 99.792 54078767 36073 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 17:10:18] CVMFS is ok
[2025-11-23 17:10:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 17:10:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 17:10:18] Further information can be found at the LHC@home message board.
[2025-11-23 17:10:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 17:10:18] Checking for apptainer binary...
[2025-11-23 17:10:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 17:10:18] Running /usr/bin/apptainer --version
[2025-11-23 17:10:18] apptainer version 1.4.4-1.el9
[2025-11-23 17:10:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 17:10:18] c-210-31-1.aglt2.org
[2025-11-23 17:10:18] apptainer works
[2025-11-23 17:10:18] Set ATHENA_PROC_NUMBER=8
[2025-11-23 17:10:18] Set ATHENA_CORE_NUMBER=8
[2025-11-23 17:10:18] Starting ATLAS job with PandaID=6895351013
[2025-11-23 17:10:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 23:09:01]  *** The last 200 lines of the pilot log: ***
[2025-11-24 23:09:01] 2025-11-25 04:08:10,829 | INFO     | mean x: 1763989779.6210408
[2025-11-24 23:09:01] 2025-11-25 04:08:10,829 | INFO     | mean y: 2958410.6114253392
[2025-11-24 23:09:01] 2025-11-25 04:08:10,829 | INFO     | intersect: -6429525778.199391
[2025-11-24 23:09:01] 2025-11-25 04:08:10,832 | INFO     | chi2: 9.776457332654918
[2025-11-24 23:09:01] 2025-11-25 04:08:10,835 | INFO     | sum of square deviations: 1699039501558.9412
[2025-11-24 23:09:01] 2025-11-25 04:08:10,893 | INFO     | sum of deviations: 6877336839864.626
[2025-11-24 23:09:01] 2025-11-25 04:08:10,893 | INFO     | mean x: 1763989627.1327283
[2025-11-24 23:09:01] 2025-11-25 04:08:10,893 | INFO     | mean y: 2965025.715258083
[2025-11-24 23:09:01] 2025-11-25 04:08:10,893 | INFO     | intersect: -7137275584.75187
[2025-11-24 23:09:01] 2025-11-25 04:08:10,895 | INFO     | chi2: 6.4585853382818295
[2025-11-24 23:09:01] 2025-11-25 04:08:10,896 | INFO     | current chi2=6.4585853382818295 (change=33.93736484985077 %)
[2025-11-24 23:09:01] 2025-11-25 04:08:10,898 | INFO     | sum of square deviations: 1684625816200.8013
[2025-11-24 23:09:01] 2025-11-25 04:08:10,939 | INFO     | sum of deviations: 7286308178979.924
[2025-11-24 23:09:01] 2025-11-25 04:08:10,939 | INFO     | mean x: 1763989474.6444824
[2025-11-24 23:09:01] 2025-11-25 04:08:10,939 | INFO     | mean y: 2969350.2542662118
[2025-11-24 23:09:01] 2025-11-25 04:08:10,940 | INFO     | intersect: -7626600856.453621
[2025-11-24 23:09:01] 2025-11-25 04:08:10,941 | INFO     | chi2: 4.739874815276429
[2025-11-24 23:09:01] 2025-11-25 04:08:10,941 | INFO     | current chi2=4.739874815276429 (change=26.61125359477912 %)
[2025-11-24 23:09:01] 2025-11-25 04:08:10,942 | INFO     | sum of square deviations: 1670293899817.1814
[2025-11-24 23:09:01] 2025-11-25 04:08:10,985 | INFO     | sum of deviations: 7346172519807.028
[2025-11-24 23:09:01] 2025-11-25 04:08:10,985 | INFO     | mean x: 1763989322.1563034
[2025-11-24 23:09:01] 2025-11-25 04:08:10,985 | INFO     | mean y: 2969985.29549344
[2025-11-24 23:09:01] 2025-11-25 04:08:10,985 | INFO     | intersect: -7755287340.002777
[2025-11-24 23:09:01] 2025-11-25 04:08:10,986 | INFO     | chi2: 4.544109969410758
[2025-11-24 23:09:01] 2025-11-25 04:08:10,986 | INFO     | current chi2=4.544109969410758 (change=4.130169118279854 %)
[2025-11-24 23:09:01] 2025-11-25 04:08:10,986 | INFO     | right removable region: 1752
[2025-11-24 23:09:01] 2025-11-25 04:08:10,989 | INFO     | sum of square deviations: 1699035057098.942
[2025-11-24 23:09:01] 2025-11-25 04:08:11,090 | INFO     | sum of deviations: 5601445177913.657
[2025-11-24 23:09:01] 2025-11-25 04:08:11,090 | INFO     | mean x: 1763989932.1327283
[2025-11-24 23:09:01] 2025-11-25 04:08:11,090 | INFO     | mean y: 2965214.980147476
[2025-11-24 23:09:01] 2025-11-25 04:08:11,090 | INFO     | intersect: -5812625733.510626
[2025-11-24 23:09:01] 2025-11-25 04:08:11,091 | INFO     | chi2: 6.524881569097173
[2025-11-24 23:09:01] 2025-11-25 04:08:11,091 | INFO     | current chi2=6.524881569097173 (change=33.25924363927786 %)
[2025-11-24 23:09:01] 2025-11-25 04:08:11,093 | INFO     | sum of square deviations: 1684619182628.6208
[2025-11-24 23:09:01] 2025-11-25 04:08:11,164 | INFO     | sum of deviations: 5309321165010.036
[2025-11-24 23:09:01] 2025-11-25 04:08:11,165 | INFO     | mean x: 1763990084.632537
[2025-11-24 23:09:01] 2025-11-25 04:08:11,165 | INFO     | mean y: 2968303.0062571103
[2025-11-24 23:09:01] 2025-11-25 04:08:11,165 | INFO     | intersect: -5556501746.832327
[2025-11-24 23:09:01] 2025-11-25 04:08:11,166 | INFO     | chi2: 5.826984585803045
[2025-11-24 23:09:01] 2025-11-25 04:08:11,166 | INFO     | current chi2=5.826984585803045 (change=10.695933342291971 %)
[2025-11-24 23:09:01] 2025-11-25 04:08:11,166 | INFO     | left removable region: 20
[2025-11-24 23:09:01] 2025-11-25 04:08:11,167 | INFO     | sum of square deviations: 1610979855635.6697
[2025-11-24 23:09:01] 2025-11-25 04:08:11,183 | INFO     | time since job start (107856s) is within the limit (172800.0s)
[2025-11-24 23:09:01] 2025-11-25 04:08:11,212 | INFO     | sum of deviations: 6112305010995.476
[2025-11-24 23:09:01] 2025-11-25 04:08:11,212 | INFO     | mean x: 1763989901.650693
[2025-11-24 23:09:01] 2025-11-25 04:08:11,212 | INFO     | mean y: 2983072.4024249422
[2025-11-24 23:09:01] 2025-11-25 04:08:11,213 | INFO     | intersect: -6689865554.777029
[2025-11-24 23:09:01] 2025-11-25 04:08:11,214 | INFO     | chi2: 0.4141821493344143
[2025-11-24 23:09:01] 2025-11-25 04:08:11,214 | INFO     | current memory leak: 3.79 B/s (using 1732 data points, chi2=0.41)
[2025-11-24 23:09:01] 2025-11-25 04:08:11,215 | INFO     | could have reported an average CPU frequency of 2766 MHz (62 samples)
[2025-11-24 23:09:01] 2025-11-25 04:08:11,215 | INFO     | ..............................
[2025-11-24 23:09:01] 2025-11-25 04:08:11,215 | INFO     | . Timing measurements:
[2025-11-24 23:09:01] 2025-11-25 04:08:11,215 | INFO     | . get job = 0 s
[2025-11-24 23:09:01] 2025-11-25 04:08:11,215 | INFO     | . initial setup = 2 s
[2025-11-24 23:09:01] 2025-11-25 04:08:11,215 | INFO     | . payload setup = 13 s
[2025-11-24 23:09:01] 2025-11-25 04:08:11,215 | INFO     | . stage-in = 0 s
[2025-11-24 23:09:01] 2025-11-25 04:08:11,215 | INFO     | . payload execution = 107804 s
[2025-11-24 23:09:01] 2025-11-25 04:08:11,215 | INFO     | . stage-out = 3 s
[2025-11-24 23:09:01] 2025-11-25 04:08:11,216 | INFO     | . log creation = 0 s
[2025-11-24 23:09:01] 2025-11-25 04:08:11,216 | INFO     | ..............................
[2025-11-24 23:09:01] 2025-11-25 04:08:11,741 | INFO     | 
[2025-11-24 23:09:01] 2025-11-25 04:08:11,741 | INFO     | job summary report
[2025-11-24 23:09:01] 2025-11-25 04:08:11,742 | INFO     | --------------------------------------------------
[2025-11-24 23:09:01] 2025-11-25 04:08:11,742 | INFO     | PanDA job id: 6895351013
[2025-11-24 23:09:01] 2025-11-25 04:08:11,742 | INFO     | task id: 47556137
[2025-11-24 23:09:01] 2025-11-25 04:08:11,742 | INFO     | errors: (none)
[2025-11-24 23:09:01] 2025-11-25 04:08:11,742 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 23:09:01] 2025-11-25 04:08:11,743 | INFO     | pilot state: finished 
[2025-11-24 23:09:01] 2025-11-25 04:08:11,743 | INFO     | transexitcode: 0
[2025-11-24 23:09:01] 2025-11-25 04:08:11,743 | INFO     | exeerrorcode: 0
[2025-11-24 23:09:01] 2025-11-25 04:08:11,743 | INFO     | exeerrordiag: 
[2025-11-24 23:09:01] 2025-11-25 04:08:11,743 | INFO     | exitcode: 0
[2025-11-24 23:09:01] 2025-11-25 04:08:11,744 | INFO     | exitmsg: OK
[2025-11-24 23:09:01] 2025-11-25 04:08:11,744 | INFO     | cpuconsumptiontime: 258310 s
[2025-11-24 23:09:01] 2025-11-25 04:08:11,744 | INFO     | nevents: 1000
[2025-11-24 23:09:01] 2025-11-25 04:08:11,744 | INFO     | neventsw: 0
[2025-11-24 23:09:01] 2025-11-25 04:08:11,744 | INFO     | pid: 3632280
[2025-11-24 23:09:01] 2025-11-25 04:08:11,745 | INFO     | pgrp: 3632280
[2025-11-24 23:09:01] 2025-11-25 04:08:11,745 | INFO     | corecount: 8
[2025-11-24 23:09:01] 2025-11-25 04:08:11,745 | INFO     | event service: False
[2025-11-24 23:09:01] 2025-11-25 04:08:11,745 | INFO     | sizes: {0: 2298755, 1: 2298755, 9: 2299045, 11: 2299073, 107820: 2373392, 107825: 2383177, 107828: 2383361, 107835: 2383607}
[2025-11-24 23:09:01] 2025-11-25 04:08:11,745 | INFO     | --------------------------------------------------
[2025-11-24 23:09:01] 2025-11-25 04:08:11,745 | INFO     | 
[2025-11-24 23:09:01] 2025-11-25 04:08:11,746 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 23:09:01] 2025-11-25 04:08:11,760 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 23:09:01] 2025-11-25 04:08:11,760 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 23:09:01] 2025-11-25 04:08:11,760 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 23:09:01] 2025-11-25 04:08:11,760 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 23:09:01] 2025-11-25 04:08:11,760 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 23:09:01] 2025-11-25 04:08:11,761 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 23:09:01] 2025-11-25 04:08:11,761 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 23:09:01] 2025-11-25 04:08:11,761 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 23:09:01] 2025-11-25 04:08:11,761 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 23:09:01] 2025-11-25 04:08:11,761 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 23:09:01] 2025-11-25 04:08:11,761 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 23:09:01] 2025-11-25 04:08:11,761 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 23:09:01] 2025-11-25 04:08:11,761 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 23:09:01] 2025-11-25 04:08:11,761 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 23:09:01] 2025-11-25 04:08:11,761 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 23:09:01] 2025-11-25 04:08:11,761 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 23:09:01] 2025-11-25 04:08:11,761 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 23:09:01] 2025-11-25 04:08:11,761 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 23:09:01] 2025-11-25 04:08:11,761 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 23:09:01] 2025-11-25 04:08:11,761 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 23:09:01] 2025-11-25 04:08:11,761 | INFO     | job 6895351013 has completed (purged errors)
[2025-11-24 23:09:01] 2025-11-25 04:08:11,761 | INFO     | overall cleanup function is called
[2025-11-24 23:09:01] 2025-11-25 04:08:12,571 | INFO     | PID=3624119 has CPU usage=16.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-24 23:09:01] 2025-11-25 04:08:12,571 | INFO     | .. there are 17 such processes running
[2025-11-24 23:09:01] 2025-11-25 04:08:12,773 | INFO     | --- collectZombieJob: --- 10, [3632280]
[2025-11-24 23:09:01] 2025-11-25 04:08:12,773 | INFO     | zombie collector waiting for pid 3632280
[2025-11-24 23:09:01] 2025-11-25 04:08:12,774 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 23:09:01] 2025-11-25 04:08:12,774 | INFO     | collected zombie processes
[2025-11-24 23:09:01] 2025-11-25 04:08:12,774 | INFO     | will attempt to kill all subprocesses of pid=3632280
[2025-11-24 23:09:01] 2025-11-25 04:08:13,052 | INFO     | process IDs to be killed: [3632280] (in reverse order)
[2025-11-24 23:09:01] 2025-11-25 04:08:13,142 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 23:09:01] 2025-11-25 04:08:13,142 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 23:09:01] 2025-11-25 04:08:13,151 | INFO     | did not find any defunct processes belonging to 3632280
[2025-11-24 23:09:01] 2025-11-25 04:08:13,159 | INFO     | did not find any defunct processes belonging to 3632280
[2025-11-24 23:09:01] 2025-11-25 04:08:13,160 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 23:09:01] 2025-11-25 04:08:13,160 | INFO     | ready for new job
[2025-11-24 23:09:01] 2025-11-25 04:08:13,160 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 23:09:01] 2025-11-25 04:08:13,165 | INFO     | ***************************************
[2025-11-24 23:09:01] 2025-11-25 04:08:13,165 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 23:09:01] 2025-11-25 04:08:13,165 | INFO     | ***************************************
[2025-11-24 23:09:01] 2025-11-25 04:08:13,165 | INFO     | 
[2025-11-24 23:09:01] 2025-11-25 04:08:13,167 | INFO     | architecture information:
[2025-11-24 23:09:01] 2025-11-25 04:08:13,167 | INFO     | executing command: cat /etc/os-release
[2025-11-24 23:09:01] 2025-11-25 04:08:13,180 | INFO     | cat /etc/os-release:
[2025-11-24 23:09:01] NAME="CentOS Linux"
[2025-11-24 23:09:01] VERSION="7 (Core)"
[2025-11-24 23:09:01] ID="centos"
[2025-11-24 23:09:01] ID_LIKE="rhel fedora"
[2025-11-24 23:09:01] VERSION_ID="7"
[2025-11-24 23:09:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 23:09:01] ANSI_COLOR="0;31"
[2025-11-24 23:09:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 23:09:01] HOME_URL="https://www.centos.org/"
[2025-11-24 23:09:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 23:09:01] 
[2025-11-24 23:09:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 23:09:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 23:09:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 23:09:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 23:09:01] 
[2025-11-24 23:09:01] 2025-11-25 04:08:13,181 | INFO     | ***************************************
[2025-11-24 23:09:01] 2025-11-25 04:08:13,683 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 23:09:01] 2025-11-25 04:08:13,701 | INFO     | sufficient remaining disk space (68821188608 B)
[2025-11-24 23:09:01] 2025-11-25 04:08:13,701 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 23:09:01] 2025-11-25 04:08:13,702 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 23:09:01] 2025-11-25 04:08:13,702 | INFO     | update_server=False
[2025-11-24 23:09:01] 2025-11-25 04:08:13,702 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 23:09:01] 2025-11-25 04:08:13,847 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 23:09:01] 2025-11-25 04:08:13,848 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 23:09:01] 2025-11-25 04:08:13,848 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 23:09:01] 2025-11-25 04:08:13,848 | INFO     | will abort loop
[2025-11-24 23:09:01] 2025-11-25 04:08:14,161 | INFO     | all payload control threads have been joined
[2025-11-24 23:09:01] 2025-11-25 04:08:14,205 | INFO     | all data control threads have been joined
[2025-11-24 23:09:01] 2025-11-25 04:08:14,238 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 23:09:01] 2025-11-25 04:08:14,518 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 23:09:01] 2025-11-25 04:08:14,707 | INFO     | [job] retrieve thread has finished
[2025-11-24 23:09:01] 2025-11-25 04:08:14,853 | INFO     | [job] job monitor thread has finished
[2025-11-24 23:09:01] 2025-11-25 04:08:14,980 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 23:09:01] 2025-11-25 04:08:14,981 | INFO     | [job] validate thread has finished
[2025-11-24 23:09:01] 2025-11-25 04:08:14,995 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 23:09:01] 2025-11-25 04:08:15,086 | INFO     | all job control threads have been joined
[2025-11-24 23:09:01] 2025-11-25 04:08:15,167 | INFO     | [payload] control thread has finished
[2025-11-24 23:09:01] 2025-11-25 04:08:15,210 | INFO     | [data] control thread has finished
[2025-11-24 23:09:01] 2025-11-25 04:08:15,233 | INFO     | [payload] validate_post thread has finished
[2025-11-24 23:09:01] 2025-11-25 04:08:15,481 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 23:09:01] 2025-11-25 04:08:15,981 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 23:09:01] 2025-11-25 04:08:16,017 | INFO     | [data] copytool_in thread has finished
[2025-11-24 23:09:01] 2025-11-25 04:08:16,091 | INFO     | [job] control thread has finished
[2025-11-24 23:09:01] 2025-11-25 04:08:16,165 | INFO     | [payload] failed_post thread has finished
[2025-11-24 23:09:01] 2025-11-25 04:08:16,243 | INFO     | [data] copytool_out thread has finished
[2025-11-24 23:09:01] 2025-11-25 04:08:16,288 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 23:09:01] 2025-11-25 04:08:17,293 | INFO     | [job] queue monitor thread has finished
[2025-11-24 23:09:01] 2025-11-25 04:08:18,524 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 23:09:01] 2025-11-25 04:08:45,087 | INFO     | PID=3624119 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 23:09:01] 2025-11-25 04:08:45,088 | INFO     | .. there are 17 such processes running
[2025-11-24 23:09:01] 2025-11-25 04:08:45,088 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 23:09:01] 2025-11-25 04:08:45,088 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 23:09:01] 2025-11-25 04:08:45,088 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 23:09:01] 2025-11-25 04:08:53,651 | INFO     | [monitor] cgroup control has ended
[2025-11-24 23:09:01] 2025-11-25 04:08:55,640 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139635448260416)>', '<ExcThread(monitor, started 139634797430528)>']
[2025-11-24 23:09:01] 2025-11-25 04:08:56,144 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 23:09:01] 2025-11-25 04:08:56,145 | INFO     | [monitor] control thread has ended
[2025-11-24 23:09:01] 2025-11-25 04:09:00,665 | INFO     | all workflow threads have been joined
[2025-11-24 23:09:01] 2025-11-25 04:09:00,665 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 23:09:01] 2025-11-25 04:09:00,666 | INFO     | traces error code: 0
[2025-11-24 23:09:01] 2025-11-25 04:09:00,666 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 23:09:01] 2025-11-25 04:09:00,851 [wrapper] ==== pilot stdout END ====
[2025-11-24 23:09:01] 2025-11-25 04:09:00,855 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 23:09:01] 2025-11-25 04:09:00,858 [wrapper] pilotpid: 3624119
[2025-11-24 23:09:01] 2025-11-25 04:09:00,862 [wrapper] Pilot exit status: 0
[2025-11-24 23:09:01] 2025-11-25 04:09:00,877 [wrapper] pandaids: 6895351013
[2025-11-24 23:09:01] 2025-11-25 04:09:00,933 [wrapper] cleanup supervisor_pilot 3019254 3624120
[2025-11-24 23:09:01] 2025-11-25 04:09:00,936 [wrapper] Test setup, not cleaning
[2025-11-24 23:09:01] 2025-11-25 04:09:00,939 [wrapper] apfmon messages muted
[2025-11-24 23:09:01] 2025-11-25 04:09:00,942 [wrapper] ==== wrapper stdout END ====
[2025-11-24 23:09:01] 2025-11-25 04:09:00,945 [wrapper] ==== wrapper stderr END ====
[2025-11-24 23:09:01]  *** Error codes and diagnostics ***
[2025-11-24 23:09:01]     "exeErrorCode": 0,
[2025-11-24 23:09:01]     "exeErrorDiag": "",
[2025-11-24 23:09:01]     "pilotErrorCode": 0,
[2025-11-24 23:09:01]     "pilotErrorDiag": "",
[2025-11-24 23:09:01]  *** Listing of results directory ***
[2025-11-24 23:09:01] total 1336392
[2025-11-24 23:09:01] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 17:51 pilot3.tar.gz
[2025-11-24 23:09:01] -rwx------. 1 boincer umatlas     36292 Nov 22 17:52 runpilot2-wrapper.sh
[2025-11-24 23:09:01] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 17:52 queuedata.json
[2025-11-24 23:09:01] -rw-r--r--. 1 boincer umatlas       100 Nov 23 17:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 23:09:01] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 17:10 run_atlas
[2025-11-24 23:09:01] -rw-r--r--. 1 boincer umatlas       105 Nov 23 17:10 job.xml
[2025-11-24 23:09:01] -rw-r--r--. 2 boincer umatlas 409351747 Nov 23 17:10 EVNT.47483658._000533.pool.root.1
[2025-11-24 23:09:01] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 17:10 start_atlas.sh
[2025-11-24 23:09:01] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 17:10 shared
[2025-11-24 23:09:01] -rw-r--r--. 2 boincer umatlas    590094 Nov 23 17:10 input.tar.gz
[2025-11-24 23:09:01] -rw-r--r--. 1 boincer umatlas         0 Nov 23 17:10 boinc_lockfile
[2025-11-24 23:09:01] -rw-r--r--. 1 boincer umatlas      2784 Nov 23 17:10 pandaJob.out
[2025-11-24 23:09:01] -rw-------. 1 boincer umatlas        57 Nov 23 17:10 setup.sh.local
[2025-11-24 23:09:01] -rw-------. 1 boincer umatlas    989786 Nov 23 17:10 agis_schedconf.cvmfs.json
[2025-11-24 23:09:01] drwx------. 5 boincer umatlas      4096 Nov 23 17:10 pilot3
[2025-11-24 23:09:01] -rw-r--r--. 1 boincer umatlas       533 Nov 24 22:55 boinc_task_state.xml
[2025-11-24 23:09:01] -rw-r--r--. 1 boincer umatlas      6844 Nov 24 23:00 init_data.xml
[2025-11-24 23:09:01] -rw-------. 1 boincer umatlas 922974285 Nov 24 23:07 HITS.47556137._005290.pool.root.1
[2025-11-24 23:09:01] -rw-------. 1 boincer umatlas      1061 Nov 24 23:07 memory_monitor_summary.json
[2025-11-24 23:09:01] -rw-------. 1 boincer umatlas   1516227 Nov 24 23:07 agis_ddmendpoints.agis.ALL.json
[2025-11-24 23:09:01] -rw-------. 1 boincer umatlas   2681208 Nov 24 23:08 log.47556137._005290.job.log.tgz.1
[2025-11-24 23:09:01] -rw-------. 1 boincer umatlas        95 Nov 24 23:08 pilot_heartbeat.json
[2025-11-24 23:09:01] -rw-------. 1 boincer umatlas      8620 Nov 24 23:08 heartbeat.json
[2025-11-24 23:09:01] -rw-r--r--. 1 boincer umatlas        29 Nov 24 23:08 wrapper_checkpoint.txt
[2025-11-24 23:09:01] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 23:08 boinc_mmap_file
[2025-11-24 23:09:01] -rw-------. 1 boincer umatlas      5010 Nov 24 23:09 pilotlog.txt
[2025-11-24 23:09:01] -rw-------. 1 boincer umatlas  13431084 Nov 24 23:09 log.47556137._005290.job.log.1
[2025-11-24 23:09:01] -rw-------. 1 boincer umatlas       353 Nov 24 23:09 output.list
[2025-11-24 23:09:01] -rw-r--r--. 1 boincer umatlas       620 Nov 24 23:09 runtime_log
[2025-11-24 23:09:01] -rw-------. 1 boincer umatlas  16128000 Nov 24 23:09 result.tar.gz
[2025-11-24 23:09:01] -rw-r--r--. 1 boincer umatlas      9354 Nov 24 23:09 runtime_log.err
[2025-11-24 23:09:01] -rw-------. 1 boincer umatlas       665 Nov 24 23:09 LJgKDmWeBh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmXRKKDmc8Udlm.diag
[2025-11-24 23:09:01] -rw-r--r--. 1 boincer umatlas     21313 Nov 24 23:09 stderr.txt
[2025-11-24 23:09:01] HITS file was successfully produced:
[2025-11-24 23:09:01] -rw-------. 1 boincer umatlas 922974285 Nov 24 23:07 shared/HITS.pool.root.1
[2025-11-24 23:09:01]  *** Contents of shared directory: ***
[2025-11-24 23:09:01] total 1317456
[2025-11-24 23:09:01] -rw-r--r--. 2 boincer umatlas 409351747 Nov 23 17:10 ATLAS.root_0
[2025-11-24 23:09:01] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 17:10 start_atlas.sh
[2025-11-24 23:09:01] -rw-r--r--. 2 boincer umatlas    590094 Nov 23 17:10 input.tar.gz
[2025-11-24 23:09:01] -rw-------. 1 boincer umatlas 922974285 Nov 24 23:07 HITS.pool.root.1
[2025-11-24 23:09:01] -rw-------. 1 boincer umatlas  16128000 Nov 24 23:09 result.tar.gz
23:09:02 (3618041): run_atlas exited; CPU time 260167.983286
23:09:02 (3618041): called boinc_finish(0)

</stderr_txt>
]]>

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