Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
13:28:11 (3302852): wrapper (7.7.26015): starting
13:28:11 (3302852): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 13:28:11] Arguments: --nthreads 12
[2025-11-24 13:28:11] Threads: 12
[2025-11-24 13:28:11] Checking for CVMFS
[2025-11-24 13:28:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 13:28:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 13:28:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 13:28:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 13:28:11] 2.13.2.0 2136 6826 63960 153247 3 81 2192518 4096001 1042 130560 0 11823969 99.994 298171 704 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-24 13:28:11] CVMFS is ok
[2025-11-24 13:28:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 13:28:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 13:28:11] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-24 13:28:11] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-24 13:28:11] Further information can be found at the LHC@home message board.
[2025-11-24 13:28:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 13:28:11] Checking for apptainer binary...
[2025-11-24 13:28:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 13:28:11] Running /usr/bin/apptainer --version
[2025-11-24 13:28:11] apptainer version 1.4.3
[2025-11-24 13:28:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 13:28:11] test-run
[2025-11-24 13:28:11] apptainer works
[2025-11-24 13:28:11] Set ATHENA_PROC_NUMBER=12
[2025-11-24 13:28:11] Set ATHENA_CORE_NUMBER=12
[2025-11-24 13:28:11] Starting ATLAS job with PandaID=6895331389
[2025-11-24 13:28:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 15:25:32]  *** The last 200 lines of the pilot log: ***
[2025-11-24 15:25:32] 2025-11-24 15:24:47,099 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 15:25:32] 2025-11-24 15:24:47,100 | INFO     | fitting pss+swap vs Time
[2025-11-24 15:25:32] 2025-11-24 15:24:47,100 | INFO     | sum of square deviations: 471562330.0
[2025-11-24 15:25:32] 2025-11-24 15:24:47,100 | INFO     | sum of deviations: 60643806116.00003
[2025-11-24 15:25:32] 2025-11-24 15:24:47,100 | INFO     | mean x: 1763994390.0
[2025-11-24 15:25:32] 2025-11-24 15:24:47,100 | INFO     | mean y: 3214132.2782608694
[2025-11-24 15:25:32] 2025-11-24 15:24:47,100 | INFO     | intersect: -226849795472.77594
[2025-11-24 15:25:32] 2025-11-24 15:24:47,100 | INFO     | chi2: 8.815516155865602
[2025-11-24 15:25:32] 2025-11-24 15:24:47,100 | INFO     | sum of square deviations: 412686807.5
[2025-11-24 15:25:32] 2025-11-24 15:24:47,100 | INFO     | sum of deviations: 100261887042.50002
[2025-11-24 15:25:32] 2025-11-24 15:24:47,100 | INFO     | mean x: 1763994237.5
[2025-11-24 15:25:32] 2025-11-24 15:24:47,100 | INFO     | mean y: 3316135.9363636365
[2025-11-24 15:25:32] 2025-11-24 15:24:47,100 | INFO     | intersect: -428557490193.80304
[2025-11-24 15:25:32] 2025-11-24 15:24:47,101 | INFO     | chi2: 5.711077239108698
[2025-11-24 15:25:32] 2025-11-24 15:24:47,101 | INFO     | current chi2=5.711077239108698 (change=35.21562279358193 %)
[2025-11-24 15:25:32] 2025-11-24 15:24:47,101 | INFO     | sum of square deviations: 358927660.0
[2025-11-24 15:25:32] 2025-11-24 15:24:47,101 | INFO     | sum of deviations: 93802973504.0
[2025-11-24 15:25:32] 2025-11-24 15:24:47,101 | INFO     | mean x: 1763994085.0
[2025-11-24 15:25:32] 2025-11-24 15:24:47,101 | INFO     | mean y: 3297803.438095238
[2025-11-24 15:25:32] 2025-11-24 15:24:47,101 | INFO     | intersect: -461002940658.2835
[2025-11-24 15:25:32] 2025-11-24 15:24:47,101 | INFO     | chi2: 5.697253138038935
[2025-11-24 15:25:32] 2025-11-24 15:24:47,101 | INFO     | current chi2=5.697253138038935 (change=0.24205768003096217 %)
[2025-11-24 15:25:32] 2025-11-24 15:24:47,101 | INFO     | right removable region: 104
[2025-11-24 15:25:32] 2025-11-24 15:24:47,101 | INFO     | sum of square deviations: 412686807.5
[2025-11-24 15:25:32] 2025-11-24 15:24:47,101 | INFO     | sum of deviations: 16651907307.00001
[2025-11-24 15:25:32] 2025-11-24 15:24:47,101 | INFO     | mean x: 1763994542.5
[2025-11-24 15:25:32] 2025-11-24 15:24:47,101 | INFO     | mean y: 3327838.727272727
[2025-11-24 15:25:32] 2025-11-24 15:24:47,101 | INFO     | intersect: -71173828973.49742
[2025-11-24 15:25:32] 2025-11-24 15:24:47,101 | INFO     | chi2: 5.427335261197909
[2025-11-24 15:25:32] 2025-11-24 15:24:47,101 | INFO     | current chi2=5.427335261197909 (change=38.434288302146555 %)
[2025-11-24 15:25:32] 2025-11-24 15:24:47,101 | INFO     | sum of square deviations: 358927660.0
[2025-11-24 15:25:32] 2025-11-24 15:24:47,101 | INFO     | sum of deviations: -20011858250.0
[2025-11-24 15:25:32] 2025-11-24 15:24:47,101 | INFO     | mean x: 1763994695.0
[2025-11-24 15:25:32] 2025-11-24 15:24:47,101 | INFO     | mean y: 3431802.057142857
[2025-11-24 15:25:32] 2025-11-24 15:24:47,101 | INFO     | intersect: 98354201954.71683
[2025-11-24 15:25:32] 2025-11-24 15:24:47,101 | INFO     | chi2: 3.2900559914490906
[2025-11-24 15:25:32] 2025-11-24 15:24:47,101 | INFO     | current chi2=3.2900559914490906 (change=39.37990131232621 %)
[2025-11-24 15:25:32] 2025-11-24 15:24:47,101 | INFO     | sum of square deviations: 310052325.0
[2025-11-24 15:25:32] 2025-11-24 15:24:47,101 | INFO     | sum of deviations: -24576044993.499996
[2025-11-24 15:25:32] 2025-11-24 15:24:47,102 | INFO     | mean x: 1763994847.5
[2025-11-24 15:25:32] 2025-11-24 15:24:47,102 | INFO     | mean y: 3445849.63
[2025-11-24 15:25:32] 2025-11-24 15:24:47,102 | INFO     | intersect: 139825060605.98495
[2025-11-24 15:25:32] 2025-11-24 15:24:47,102 | INFO     | chi2: 3.251574126649843
[2025-11-24 15:25:32] 2025-11-24 15:24:47,102 | INFO     | current chi2=3.251574126649843 (change=1.1696416382962098 %)
[2025-11-24 15:25:32] 2025-11-24 15:24:47,102 | INFO     | left removable region: 30
[2025-11-24 15:25:32] 2025-11-24 15:24:47,102 | INFO     | sum of square deviations: 125630262.5
[2025-11-24 15:25:32] 2025-11-24 15:24:47,102 | INFO     | sum of deviations: 4889519416.000001
[2025-11-24 15:25:32] 2025-11-24 15:24:47,102 | INFO     | mean x: 1763994969.5
[2025-11-24 15:25:32] 2025-11-24 15:24:47,102 | INFO     | mean y: 3598653.6486486485
[2025-11-24 15:25:32] 2025-11-24 15:24:47,102 | INFO     | intersect: -68650939524.17757
[2025-11-24 15:25:32] 2025-11-24 15:24:47,102 | INFO     | chi2: 0.0019850687119256473
[2025-11-24 15:25:32] 2025-11-24 15:24:47,102 | INFO     | current memory leak: 38.92 B/s (using 74 data points, chi2=0.00)
[2025-11-24 15:25:32] 2025-11-24 15:24:47,102 | INFO     | could have reported an average CPU frequency of 4299 MHz (7 samples)
[2025-11-24 15:25:32] 2025-11-24 15:24:47,102 | INFO     | ..............................
[2025-11-24 15:25:32] 2025-11-24 15:24:47,102 | INFO     | . Timing measurements:
[2025-11-24 15:25:32] 2025-11-24 15:24:47,102 | INFO     | . get job = 0 s
[2025-11-24 15:25:32] 2025-11-24 15:24:47,102 | INFO     | . initial setup = 2 s
[2025-11-24 15:25:32] 2025-11-24 15:24:47,102 | INFO     | . payload setup = 1 s
[2025-11-24 15:25:32] 2025-11-24 15:24:47,102 | INFO     | . stage-in = 0 s
[2025-11-24 15:25:32] 2025-11-24 15:24:47,102 | INFO     | . payload execution = 6965 s
[2025-11-24 15:25:32] 2025-11-24 15:24:47,102 | INFO     | . stage-out = 0 s
[2025-11-24 15:25:32] 2025-11-24 15:24:47,102 | INFO     | . log creation = 0 s
[2025-11-24 15:25:32] 2025-11-24 15:24:47,102 | INFO     | ..............................
[2025-11-24 15:25:32] 2025-11-24 15:24:47,122 | INFO     | 
[2025-11-24 15:25:32] 2025-11-24 15:24:47,122 | INFO     | job summary report
[2025-11-24 15:25:32] 2025-11-24 15:24:47,122 | INFO     | --------------------------------------------------
[2025-11-24 15:25:32] 2025-11-24 15:24:47,122 | INFO     | PanDA job id: 6895331389
[2025-11-24 15:25:32] 2025-11-24 15:24:47,122 | INFO     | task id: 47556149
[2025-11-24 15:25:32] 2025-11-24 15:24:47,122 | INFO     | errors: (none)
[2025-11-24 15:25:32] 2025-11-24 15:24:47,122 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 15:25:32] 2025-11-24 15:24:47,122 | INFO     | pilot state: finished 
[2025-11-24 15:25:32] 2025-11-24 15:24:47,122 | INFO     | transexitcode: 0
[2025-11-24 15:25:32] 2025-11-24 15:24:47,122 | INFO     | exeerrorcode: 0
[2025-11-24 15:25:32] 2025-11-24 15:24:47,122 | INFO     | exeerrordiag: 
[2025-11-24 15:25:32] 2025-11-24 15:24:47,122 | INFO     | exitcode: 0
[2025-11-24 15:25:32] 2025-11-24 15:24:47,122 | INFO     | exitmsg: OK
[2025-11-24 15:25:32] 2025-11-24 15:24:47,122 | INFO     | cpuconsumptiontime: 73625 s
[2025-11-24 15:25:32] 2025-11-24 15:24:47,122 | INFO     | nevents: 1000
[2025-11-24 15:25:32] 2025-11-24 15:24:47,122 | INFO     | neventsw: 0
[2025-11-24 15:25:32] 2025-11-24 15:24:47,122 | INFO     | pid: 3313370
[2025-11-24 15:25:32] 2025-11-24 15:24:47,122 | INFO     | pgrp: 3313370
[2025-11-24 15:25:32] 2025-11-24 15:24:47,122 | INFO     | corecount: 12
[2025-11-24 15:25:32] 2025-11-24 15:24:47,122 | INFO     | event service: False
[2025-11-24 15:25:32] 2025-11-24 15:24:47,122 | INFO     | sizes: {0: 2284309, 1: 2284571, 11: 2284599, 6970: 2312898, 6972: 2321906, 6974: 2321962, 6977: 2322336}
[2025-11-24 15:25:32] 2025-11-24 15:24:47,122 | INFO     | --------------------------------------------------
[2025-11-24 15:25:32] 2025-11-24 15:24:47,122 | INFO     | 
[2025-11-24 15:25:32] 2025-11-24 15:24:47,122 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-11-24 15:25:32] 2025-11-24 15:24:47,128 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 15:25:32] 2025-11-24 15:24:47,128 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 15:25:32] 2025-11-24 15:24:47,128 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 15:25:32] 2025-11-24 15:24:47,128 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 15:25:32] 2025-11-24 15:24:47,128 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 15:25:32] 2025-11-24 15:24:47,128 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 15:25:32] 2025-11-24 15:24:47,128 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 15:25:32] 2025-11-24 15:24:47,129 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 15:25:32] 2025-11-24 15:24:47,129 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 15:25:32] 2025-11-24 15:24:47,129 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 15:25:32] 2025-11-24 15:24:47,129 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 15:25:32] 2025-11-24 15:24:47,129 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 15:25:32] 2025-11-24 15:24:47,129 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 15:25:32] 2025-11-24 15:24:47,129 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 15:25:32] 2025-11-24 15:24:47,129 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 15:25:32] 2025-11-24 15:24:47,129 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 15:25:32] 2025-11-24 15:24:47,129 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 15:25:32] 2025-11-24 15:24:47,129 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 15:25:32] 2025-11-24 15:24:47,129 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 15:25:32] 2025-11-24 15:24:47,129 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 15:25:32] 2025-11-24 15:24:47,129 | INFO     | job 6895331389 has completed (purged errors)
[2025-11-24 15:25:32] 2025-11-24 15:24:47,129 | INFO     | overall cleanup function is called
[2025-11-24 15:25:32] 2025-11-24 15:24:48,137 | INFO     | --- collectZombieJob: --- 10, [3313370]
[2025-11-24 15:25:32] 2025-11-24 15:24:48,137 | INFO     | zombie collector waiting for pid 3313370
[2025-11-24 15:25:32] 2025-11-24 15:24:48,137 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 15:25:32] 2025-11-24 15:24:48,137 | INFO     | collected zombie processes
[2025-11-24 15:25:32] 2025-11-24 15:24:48,137 | INFO     | will attempt to kill all subprocesses of pid=3313370
[2025-11-24 15:25:32] 2025-11-24 15:24:48,159 | INFO     | process IDs to be killed: [3313370] (in reverse order)
[2025-11-24 15:25:32] 2025-11-24 15:24:48,172 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 15:25:32] 2025-11-24 15:24:48,172 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 15:25:32] 2025-11-24 15:24:48,173 | INFO     | did not find any defunct processes belonging to 3313370
[2025-11-24 15:25:32] 2025-11-24 15:24:48,173 | INFO     | did not find any defunct processes belonging to 3313370
[2025-11-24 15:25:32] 2025-11-24 15:24:48,174 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 15:25:32] 2025-11-24 15:24:48,174 | INFO     | ready for new job
[2025-11-24 15:25:32] 2025-11-24 15:24:48,174 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 15:25:32] 2025-11-24 15:24:48,174 | INFO     | ***************************************
[2025-11-24 15:25:32] 2025-11-24 15:24:48,174 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 15:25:32] 2025-11-24 15:24:48,174 | INFO     | ***************************************
[2025-11-24 15:25:32] 2025-11-24 15:24:48,174 | INFO     | 
[2025-11-24 15:25:32] 2025-11-24 15:24:48,175 | INFO     | pilot is running in a VM
[2025-11-24 15:25:32] 2025-11-24 15:24:48,175 | INFO     | architecture information:
[2025-11-24 15:25:32] 2025-11-24 15:24:48,176 | INFO     | executing command: cat /etc/os-release
[2025-11-24 15:25:32] 2025-11-24 15:24:48,179 | INFO     | cat /etc/os-release:
[2025-11-24 15:25:32] NAME="CentOS Linux"
[2025-11-24 15:25:32] VERSION="7 (Core)"
[2025-11-24 15:25:32] ID="centos"
[2025-11-24 15:25:32] ID_LIKE="rhel fedora"
[2025-11-24 15:25:32] VERSION_ID="7"
[2025-11-24 15:25:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 15:25:32] ANSI_COLOR="0;31"
[2025-11-24 15:25:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 15:25:32] HOME_URL="https://www.centos.org/"
[2025-11-24 15:25:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 15:25:32] 
[2025-11-24 15:25:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 15:25:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 15:25:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 15:25:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 15:25:32] 
[2025-11-24 15:25:32] 2025-11-24 15:24:48,179 | INFO     | ***************************************
[2025-11-24 15:25:32] 2025-11-24 15:24:48,682 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-11-24 15:25:32] 2025-11-24 15:24:48,688 | INFO     | sufficient remaining disk space (70123520000 B)
[2025-11-24 15:25:32] 2025-11-24 15:24:48,688 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 15:25:32] 2025-11-24 15:24:48,688 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 15:25:32] 2025-11-24 15:24:48,688 | INFO     | update_server=False
[2025-11-24 15:25:32] 2025-11-24 15:24:48,688 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 15:25:32] 2025-11-24 15:24:48,688 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 15:25:32] 2025-11-24 15:24:48,688 | INFO     | aborting loop
[2025-11-24 15:25:32] 2025-11-24 15:24:48,688 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 15:25:32] 2025-11-24 15:24:48,809 | INFO     | all data control threads have been joined
[2025-11-24 15:25:32] 2025-11-24 15:24:49,604 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 15:25:32] 2025-11-24 15:24:49,693 | INFO     | [job] retrieve thread has finished
[2025-11-24 15:25:32] 2025-11-24 15:24:49,693 | INFO     | [job] job monitor thread has finished
[2025-11-24 15:25:32] 2025-11-24 15:24:49,693 | INFO     | [job] queue monitor thread has finished
[2025-11-24 15:25:32] 2025-11-24 15:24:49,714 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 15:25:32] 2025-11-24 15:24:49,744 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 15:25:32] 2025-11-24 15:24:49,815 | INFO     | [data] control thread has finished
[2025-11-24 15:25:32] 2025-11-24 15:24:50,019 | INFO     | all payload control threads have been joined
[2025-11-24 15:25:32] 2025-11-24 15:24:50,090 | INFO     | [data] copytool_in thread has finished
[2025-11-24 15:25:32] 2025-11-24 15:24:50,112 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 15:25:32] 2025-11-24 15:24:50,156 | INFO     | [job] validate thread has finished
[2025-11-24 15:25:32] 2025-11-24 15:24:50,220 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 15:25:32] 2025-11-24 15:24:50,230 | INFO     | all job control threads have been joined
[2025-11-24 15:25:32] 2025-11-24 15:24:50,365 | INFO     | [payload] validate_post thread has finished
[2025-11-24 15:25:32] 2025-11-24 15:24:50,574 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 15:25:32] 2025-11-24 15:24:50,659 | INFO     | [payload] failed_post thread has finished
[2025-11-24 15:25:32] 2025-11-24 15:24:51,024 | INFO     | [payload] control thread has finished
[2025-11-24 15:25:32] 2025-11-24 15:24:51,235 | INFO     | [job] control thread has finished
[2025-11-24 15:25:32] 2025-11-24 15:24:51,719 | INFO     | [data] copytool_out thread has finished
[2025-11-24 15:25:32] 2025-11-24 15:24:53,609 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 15:25:32] 2025-11-24 15:25:19,560 | INFO     | PID=3306711 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 15:25:32] 2025-11-24 15:25:19,561 | INFO     | .. there are 2 such processes running
[2025-11-24 15:25:32] 2025-11-24 15:25:19,561 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 15:25:32] 2025-11-24 15:25:19,561 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 15:25:32] 2025-11-24 15:25:19,561 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 15:25:32] 2025-11-24 15:25:25,381 | INFO     | [monitor] cgroup control has ended
[2025-11-24 15:25:32] 2025-11-24 15:25:27,486 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128360437241664)>', '<ExcThread(monitor, started 128359719757568)>']
[2025-11-24 15:25:32] 2025-11-24 15:25:27,600 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 15:25:32] 2025-11-24 15:25:27,600 | INFO     | [monitor] control thread has ended
[2025-11-24 15:25:32] 2025-11-24 15:25:32,511 | INFO     | all workflow threads have been joined
[2025-11-24 15:25:32] 2025-11-24 15:25:32,511 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 15:25:32] 2025-11-24 15:25:32,511 | INFO     | traces error code: 0
[2025-11-24 15:25:32] 2025-11-24 15:25:32,511 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 15:25:32] 2025-11-24 15:25:32,550 [wrapper] ==== pilot stdout END ====
[2025-11-24 15:25:32] 2025-11-24 15:25:32,551 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 15:25:32] 2025-11-24 15:25:32,552 [wrapper] pilotpid: 3306711
[2025-11-24 15:25:32] 2025-11-24 15:25:32,553 [wrapper] Pilot exit status: 0
[2025-11-24 15:25:32] 2025-11-24 15:25:32,556 [wrapper] pandaids: 6895331389
[2025-11-24 15:25:32] 2025-11-24 15:25:32,564 [wrapper] cleanup supervisor_pilot 3358600 3306712
[2025-11-24 15:25:32] 2025-11-24 15:25:32,565 [wrapper] Test setup, not cleaning
[2025-11-24 15:25:32] 2025-11-24 15:25:32,566 [wrapper] apfmon messages muted
[2025-11-24 15:25:32] 2025-11-24 15:25:32,567 [wrapper] ==== wrapper stdout END ====
[2025-11-24 15:25:32] 2025-11-24 15:25:32,568 [wrapper] ==== wrapper stderr END ====
[2025-11-24 15:25:32]  *** Error codes and diagnostics ***
[2025-11-24 15:25:32]     "exeErrorCode": 0,
[2025-11-24 15:25:32]     "exeErrorDiag": "",
[2025-11-24 15:25:32]     "pilotErrorCode": 0,
[2025-11-24 15:25:32]     "pilotErrorDiag": "",
[2025-11-24 15:25:32]  *** Listing of results directory ***
[2025-11-24 15:25:32] total 1309796
[2025-11-24 15:25:32] -rw-r--r-- 1 boinc boinc    576529 Nov 21 23:30 pilot3.tar.gz
[2025-11-24 15:25:32] -rw-r--r-- 1 boinc boinc      5112 Nov 21 23:34 queuedata.json
[2025-11-24 15:25:32] -rwx------ 1 boinc boinc     36292 Nov 21 23:34 runpilot2-wrapper.sh
[2025-11-24 15:25:32] -rw-r--r-- 1 boinc boinc       100 Nov 24 13:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 15:25:32] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 13:28 run_atlas
[2025-11-24 15:25:32] -rw-r--r-- 1 boinc boinc       105 Nov 24 13:28 job.xml
[2025-11-24 15:25:32] -rw-r--r-- 2 boinc boinc     15847 Nov 24 13:28 start_atlas.sh
[2025-11-24 15:25:32] drwxrwx--x 2 boinc boinc      4096 Nov 24 13:28 shared
[2025-11-24 15:25:32] -rw-r--r-- 2 boinc boinc    590099 Nov 24 13:28 input.tar.gz
[2025-11-24 15:25:32] -rw-r--r-- 1 boinc boinc      6943 Nov 24 13:28 init_data.xml
[2025-11-24 15:25:32] -rw-r--r-- 2 boinc boinc 408420407 Nov 24 13:28 EVNT.47483658._001048.pool.root.1
[2025-11-24 15:25:32] -rw-r--r-- 1 boinc boinc         0 Nov 24 13:28 boinc_lockfile
[2025-11-24 15:25:32] -rw-r--r-- 1 boinc boinc      2782 Nov 24 13:28 pandaJob.out
[2025-11-24 15:25:32] -rw------- 1 boinc boinc    988280 Nov 24 13:28 agis_schedconf.cvmfs.json
[2025-11-24 15:25:32] -rw------- 1 boinc boinc   1516227 Nov 24 13:28 agis_ddmendpoints.agis.ALL.json
[2025-11-24 15:25:32] drwx------ 5 boinc boinc      4096 Nov 24 13:28 pilot3
[2025-11-24 15:25:32] -rw-r--r-- 1 boinc boinc       530 Nov 24 15:19 boinc_task_state.xml
[2025-11-24 15:25:32] -rw------- 1 boinc boinc 923119066 Nov 24 15:24 HITS.47556149._000341.pool.root.1
[2025-11-24 15:25:32] -rw------- 1 boinc boinc      1032 Nov 24 15:24 memory_monitor_summary.json
[2025-11-24 15:25:32] -rw------- 1 boinc boinc   1834801 Nov 24 15:24 log.47556149._000341.job.log.tgz.1
[2025-11-24 15:25:32] -rw------- 1 boinc boinc        95 Nov 24 15:24 pilot_heartbeat.json
[2025-11-24 15:25:32] -rw------- 1 boinc boinc      8546 Nov 24 15:24 heartbeat.json
[2025-11-24 15:25:32] -rw-r--r-- 1 boinc boinc      8192 Nov 24 15:25 boinc_mmap_file
[2025-11-24 15:25:32] -rw-r--r-- 1 boinc boinc        27 Nov 24 15:25 wrapper_checkpoint.txt
[2025-11-24 15:25:32] -rw------- 1 boinc boinc      4892 Nov 24 15:25 pilotlog.txt
[2025-11-24 15:25:32] -rw------- 1 boinc boinc   1053621 Nov 24 15:25 log.47556149._000341.job.log.1
[2025-11-24 15:25:32] -rw------- 1 boinc boinc       353 Nov 24 15:25 output.list
[2025-11-24 15:25:32] -rw-r--r-- 1 boinc boinc       620 Nov 24 15:25 runtime_log
[2025-11-24 15:25:32] -rw------- 1 boinc boinc   2908160 Nov 24 15:25 result.tar.gz
[2025-11-24 15:25:32] -rw-r--r-- 1 boinc boinc      8890 Nov 24 15:25 runtime_log.err
[2025-11-24 15:25:32] -rw------- 1 boinc boinc       646 Nov 24 15:25 2sSMDmLppg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmomJKDmaGcj3n.diag
[2025-11-24 15:25:32] -rw-r--r-- 1 boinc boinc     21177 Nov 24 15:25 stderr.txt
[2025-11-24 15:25:32] HITS file was successfully produced:
[2025-11-24 15:25:32] -rw------- 1 boinc boinc 923119066 Nov 24 15:24 shared/HITS.pool.root.1
[2025-11-24 15:25:32]  *** Contents of shared directory: ***
[2025-11-24 15:25:32] total 1303780
[2025-11-24 15:25:32] -rw-r--r-- 2 boinc boinc     15847 Nov 24 13:28 start_atlas.sh
[2025-11-24 15:25:32] -rw-r--r-- 2 boinc boinc    590099 Nov 24 13:28 input.tar.gz
[2025-11-24 15:25:32] -rw-r--r-- 2 boinc boinc 408420407 Nov 24 13:28 ATLAS.root_0
[2025-11-24 15:25:32] -rw------- 1 boinc boinc 923119066 Nov 24 15:24 HITS.pool.root.1
[2025-11-24 15:25:32] -rw------- 1 boinc boinc   2908160 Nov 24 15:25 result.tar.gz
15:25:34 (3302852): run_atlas exited; CPU time 73551.350560
15:25:34 (3302852): called boinc_finish(0)

</stderr_txt>
]]>

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