Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:48:33 (3834905): wrapper (7.7.26015): starting
11:48:33 (3834905): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 11:48:33] Arguments: --nthreads 12
[2025-11-24 11:48:33] Threads: 12
[2025-11-24 11:48:33] Checking for CVMFS
[2025-11-24 11:48:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 11:48:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 11:48:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 11:48:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 11:48:34] 2.13.3.0 9330 24244 307164 153242 0 97 38501117 46080001 7301 130560 0 143273812 99.896 42067891 27537 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-11-24 11:48:34] CVMFS is ok
[2025-11-24 11:48:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 11:48:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 11:48:34] Further information can be found at the LHC@home message board.
[2025-11-24 11:48:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 11:48:34] Checking for apptainer binary...
[2025-11-24 11:48:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 11:48:34] Running /usr/bin/apptainer --version
[2025-11-24 11:48:34] apptainer version 1.4.3-1.el9
[2025-11-24 11:48:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 11:48:34] mff2102.farm.particle.cz
[2025-11-24 11:48:34] apptainer works
[2025-11-24 11:48:34] Set ATHENA_PROC_NUMBER=12
[2025-11-24 11:48:34] Set ATHENA_CORE_NUMBER=12
[2025-11-24 11:48:34] Starting ATLAS job with PandaID=6895339665
[2025-11-24 11:48:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 17:06:24]  *** The last 200 lines of the pilot log: ***
[2025-11-24 17:06:24] 2025-11-24 16:05:23,441 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 17:06:24] 2025-11-24 16:05:23,517 | INFO     | time since job start (18997s) is within the limit (172800.0s)
[2025-11-24 17:06:24] 2025-11-24 16:05:23,864 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 17:06:24] 2025-11-24 16:05:23,880 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2768.2289166666665
[2025-11-24 17:06:24] 2025-11-24 16:05:23,899 | INFO     | using path: /scratch/.boinc/slots/6/PanDA_Pilot-6895339665/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 17:06:24] 2025-11-24 16:05:23,900 | INFO     | extracted standard info from prmon json
[2025-11-24 17:06:24] 2025-11-24 16:05:23,900 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 17:06:24] 2025-11-24 16:05:23,900 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 17:06:24] 2025-11-24 16:05:23,905 | INFO     | fitting pss+swap vs Time
[2025-11-24 17:06:24] 2025-11-24 16:05:23,906 | INFO     | sum of square deviations: 9327214040.919659
[2025-11-24 17:06:24] 2025-11-24 16:05:23,909 | INFO     | sum of deviations: 196985556234.00006
[2025-11-24 17:06:24] 2025-11-24 16:05:23,909 | INFO     | mean x: 1763990812.9839227
[2025-11-24 17:06:24] 2025-11-24 16:05:23,909 | INFO     | mean y: 3449730.0
[2025-11-24 17:06:24] 2025-11-24 16:05:23,909 | INFO     | intersect: -37251051985.39567
[2025-11-24 17:06:24] 2025-11-24 16:05:23,909 | INFO     | chi2: 4.665941246260262
[2025-11-24 17:06:24] 2025-11-24 16:05:23,910 | INFO     | sum of square deviations: 8884629298.5
[2025-11-24 17:06:24] 2025-11-24 16:05:23,912 | INFO     | sum of deviations: 302084466709.5001
[2025-11-24 17:06:24] 2025-11-24 16:05:23,913 | INFO     | mean x: 1763990660.5
[2025-11-24 17:06:24] 2025-11-24 16:05:23,913 | INFO     | mean y: 3485873.8725490198
[2025-11-24 17:06:24] 2025-11-24 16:05:23,913 | INFO     | intersect: -59973600401.144806
[2025-11-24 17:06:24] 2025-11-24 16:05:23,913 | INFO     | chi2: 2.2599321185610703
[2025-11-24 17:06:24] 2025-11-24 16:05:23,913 | INFO     | current chi2=2.2599321185610703 (change=51.565354142159435 %)
[2025-11-24 17:06:24] 2025-11-24 16:05:23,914 | INFO     | sum of square deviations: 8456202964.996685
[2025-11-24 17:06:24] 2025-11-24 16:05:23,916 | INFO     | sum of deviations: 307395409774.9003
[2025-11-24 17:06:24] 2025-11-24 16:05:23,916 | INFO     | mean x: 1763990508.0033224
[2025-11-24 17:06:24] 2025-11-24 16:05:23,916 | INFO     | mean y: 3487703.099667774
[2025-11-24 17:06:24] 2025-11-24 16:05:23,917 | INFO     | intersect: -64120160616.51329
[2025-11-24 17:06:24] 2025-11-24 16:05:23,917 | INFO     | chi2: 2.1237870388136666
[2025-11-24 17:06:24] 2025-11-24 16:05:23,917 | INFO     | current chi2=2.1237870388136666 (change=6.024299518964719 %)
[2025-11-24 17:06:24] 2025-11-24 16:05:23,917 | INFO     | right removable region: 300
[2025-11-24 17:06:24] 2025-11-24 16:05:23,918 | INFO     | sum of square deviations: 8884480216.486887
[2025-11-24 17:06:24] 2025-11-24 16:05:23,920 | INFO     | sum of deviations: 104037188495.96396
[2025-11-24 17:06:24] 2025-11-24 16:05:23,920 | INFO     | mean x: 1763990965.493464
[2025-11-24 17:06:24] 2025-11-24 16:05:23,920 | INFO     | mean y: 3481592.232026144
[2025-11-24 17:06:24] 2025-11-24 16:05:23,920 | INFO     | intersect: -20652837754.583847
[2025-11-24 17:06:24] 2025-11-24 16:05:23,921 | INFO     | chi2: 2.6548340900951666
[2025-11-24 17:06:24] 2025-11-24 16:05:23,921 | INFO     | current chi2=2.6548340900951666 (change=43.10185341011295 %)
[2025-11-24 17:06:24] 2025-11-24 16:05:23,921 | INFO     | sum of square deviations: 8456035583.986736
[2025-11-24 17:06:24] 2025-11-24 16:05:23,924 | INFO     | sum of deviations: 82627619363.34549
[2025-11-24 17:06:24] 2025-11-24 16:05:23,924 | INFO     | mean x: 1763991117.9933555
[2025-11-24 17:06:24] 2025-11-24 16:05:23,924 | INFO     | mean y: 3489197.172757475
[2025-11-24 17:06:24] 2025-11-24 16:05:23,924 | INFO     | intersect: -17233238961.101967
[2025-11-24 17:06:24] 2025-11-24 16:05:23,925 | INFO     | chi2: 2.609364921021228
[2025-11-24 17:06:24] 2025-11-24 16:05:23,925 | INFO     | current chi2=2.609364921021228 (change=1.7126934313363702 %)
[2025-11-24 17:06:24] 2025-11-24 16:05:23,925 | INFO     | left removable region: 20
[2025-11-24 17:06:24] 2025-11-24 16:05:23,925 | INFO     | sum of square deviations: 6806883007.985671
[2025-11-24 17:06:24] 2025-11-24 16:05:23,927 | INFO     | sum of deviations: 168721468700.39987
[2025-11-24 17:06:24] 2025-11-24 16:05:23,928 | INFO     | mean x: 1763991087.5071428
[2025-11-24 17:06:24] 2025-11-24 16:05:23,928 | INFO     | mean y: 3538496.3
[2025-11-24 17:06:24] 2025-11-24 16:05:23,928 | INFO     | intersect: -43720316711.65001
[2025-11-24 17:06:24] 2025-11-24 16:05:23,928 | INFO     | chi2: 0.033395615538726324
[2025-11-24 17:06:24] 2025-11-24 16:05:23,928 | INFO     | current memory leak: 24.79 B/s (using 280 data points, chi2=0.03)
[2025-11-24 17:06:24] 2025-11-24 16:05:23,929 | INFO     | could have reported an average CPU frequency of 2734 MHz (14 samples)
[2025-11-24 17:06:24] 2025-11-24 16:05:23,929 | INFO     | ..............................
[2025-11-24 17:06:24] 2025-11-24 16:05:23,929 | INFO     | . Timing measurements:
[2025-11-24 17:06:24] 2025-11-24 16:05:23,929 | INFO     | . get job = 0 s
[2025-11-24 17:06:24] 2025-11-24 16:05:23,929 | INFO     | . initial setup = 1 s
[2025-11-24 17:06:24] 2025-11-24 16:05:23,929 | INFO     | . payload setup = 7 s
[2025-11-24 17:06:24] 2025-11-24 16:05:23,929 | INFO     | . stage-in = 0 s
[2025-11-24 17:06:24] 2025-11-24 16:05:23,929 | INFO     | . payload execution = 18956 s
[2025-11-24 17:06:24] 2025-11-24 16:05:23,930 | INFO     | . stage-out = 2 s
[2025-11-24 17:06:24] 2025-11-24 16:05:23,930 | INFO     | . log creation = 0 s
[2025-11-24 17:06:24] 2025-11-24 16:05:23,930 | INFO     | ..............................
[2025-11-24 17:06:24] 2025-11-24 16:05:24,003 | INFO     | 
[2025-11-24 17:06:24] 2025-11-24 16:05:24,003 | INFO     | job summary report
[2025-11-24 17:06:24] 2025-11-24 16:05:24,003 | INFO     | --------------------------------------------------
[2025-11-24 17:06:24] 2025-11-24 16:05:24,003 | INFO     | PanDA job id: 6895339665
[2025-11-24 17:06:24] 2025-11-24 16:05:24,003 | INFO     | task id: 47556137
[2025-11-24 17:06:24] 2025-11-24 16:05:24,003 | INFO     | errors: (none)
[2025-11-24 17:06:24] 2025-11-24 16:05:24,003 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 17:06:24] 2025-11-24 16:05:24,003 | INFO     | pilot state: finished 
[2025-11-24 17:06:24] 2025-11-24 16:05:24,003 | INFO     | transexitcode: 0
[2025-11-24 17:06:24] 2025-11-24 16:05:24,003 | INFO     | exeerrorcode: 0
[2025-11-24 17:06:24] 2025-11-24 16:05:24,003 | INFO     | exeerrordiag: 
[2025-11-24 17:06:24] 2025-11-24 16:05:24,004 | INFO     | exitcode: 0
[2025-11-24 17:06:24] 2025-11-24 16:05:24,004 | INFO     | exitmsg: OK
[2025-11-24 17:06:24] 2025-11-24 16:05:24,004 | INFO     | cpuconsumptiontime: 217921 s
[2025-11-24 17:06:24] 2025-11-24 16:05:24,004 | INFO     | nevents: 1000
[2025-11-24 17:06:24] 2025-11-24 16:05:24,004 | INFO     | neventsw: 0
[2025-11-24 17:06:24] 2025-11-24 16:05:24,004 | INFO     | pid: 3846072
[2025-11-24 17:06:24] 2025-11-24 16:05:24,004 | INFO     | pgrp: 3846072
[2025-11-24 17:06:24] 2025-11-24 16:05:24,004 | INFO     | corecount: 12
[2025-11-24 17:06:24] 2025-11-24 16:05:24,004 | INFO     | event service: False
[2025-11-24 17:06:24] 2025-11-24 16:05:24,004 | INFO     | sizes: {0: 2298757, 5: 2299019, 11: 2299075, 18968: 2333140, 18970: 2342927, 18974: 2342983, 18981: 2343357}
[2025-11-24 17:06:24] 2025-11-24 16:05:24,004 | INFO     | --------------------------------------------------
[2025-11-24 17:06:24] 2025-11-24 16:05:24,004 | INFO     | 
[2025-11-24 17:06:24] 2025-11-24 16:05:24,004 | INFO     | executing command: ls -lF /scratch/.boinc/slots/6
[2025-11-24 17:06:24] 2025-11-24 16:05:24,021 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 17:06:24] 2025-11-24 16:05:24,021 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 17:06:24] 2025-11-24 16:05:24,021 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 17:06:24] 2025-11-24 16:05:24,021 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 17:06:24] 2025-11-24 16:05:24,021 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 17:06:24] 2025-11-24 16:05:24,022 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 17:06:24] 2025-11-24 16:05:24,022 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 17:06:24] 2025-11-24 16:05:24,022 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 17:06:24] 2025-11-24 16:05:24,022 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 17:06:24] 2025-11-24 16:05:24,022 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 17:06:24] 2025-11-24 16:05:24,022 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 17:06:24] 2025-11-24 16:05:24,022 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 17:06:24] 2025-11-24 16:05:24,022 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 17:06:24] 2025-11-24 16:05:24,022 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 17:06:24] 2025-11-24 16:05:24,022 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 17:06:24] 2025-11-24 16:05:24,022 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 17:06:24] 2025-11-24 16:05:24,022 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 17:06:24] 2025-11-24 16:05:24,022 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 17:06:24] 2025-11-24 16:05:24,022 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 17:06:24] 2025-11-24 16:05:24,022 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 17:06:24] 2025-11-24 16:05:24,022 | INFO     | job 6895339665 has completed (purged errors)
[2025-11-24 17:06:24] 2025-11-24 16:05:24,023 | INFO     | overall cleanup function is called
[2025-11-24 17:06:24] 2025-11-24 16:05:25,040 | INFO     | --- collectZombieJob: --- 10, [3846072]
[2025-11-24 17:06:24] 2025-11-24 16:05:25,040 | INFO     | zombie collector waiting for pid 3846072
[2025-11-24 17:06:24] 2025-11-24 16:05:25,041 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 17:06:24] 2025-11-24 16:05:25,041 | INFO     | collected zombie processes
[2025-11-24 17:06:24] 2025-11-24 16:05:25,041 | INFO     | will attempt to kill all subprocesses of pid=3846072
[2025-11-24 17:06:24] 2025-11-24 16:05:25,409 | INFO     | process IDs to be killed: [3846072] (in reverse order)
[2025-11-24 17:06:24] 2025-11-24 16:05:25,525 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 17:06:24] 2025-11-24 16:05:25,526 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 17:06:24] 2025-11-24 16:05:25,538 | INFO     | did not find any defunct processes belonging to 3846072
[2025-11-24 17:06:24] 2025-11-24 16:05:25,549 | INFO     | did not find any defunct processes belonging to 3846072
[2025-11-24 17:06:24] 2025-11-24 16:05:25,550 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 17:06:24] 2025-11-24 16:05:25,550 | INFO     | ready for new job
[2025-11-24 17:06:24] 2025-11-24 16:05:25,550 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 17:06:24] 2025-11-24 16:05:25,553 | INFO     | ***************************************
[2025-11-24 17:06:24] 2025-11-24 16:05:25,553 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 17:06:24] 2025-11-24 16:05:25,553 | INFO     | ***************************************
[2025-11-24 17:06:24] 2025-11-24 16:05:25,553 | INFO     | 
[2025-11-24 17:06:24] 2025-11-24 16:05:25,560 | INFO     | architecture information:
[2025-11-24 17:06:24] 2025-11-24 16:05:25,560 | INFO     | executing command: cat /etc/os-release
[2025-11-24 17:06:24] 2025-11-24 16:05:25,579 | INFO     | cat /etc/os-release:
[2025-11-24 17:06:24] NAME="CentOS Linux"
[2025-11-24 17:06:24] VERSION="7 (Core)"
[2025-11-24 17:06:24] ID="centos"
[2025-11-24 17:06:24] ID_LIKE="rhel fedora"
[2025-11-24 17:06:24] VERSION_ID="7"
[2025-11-24 17:06:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 17:06:24] ANSI_COLOR="0;31"
[2025-11-24 17:06:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 17:06:24] HOME_URL="https://www.centos.org/"
[2025-11-24 17:06:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 17:06:24] 
[2025-11-24 17:06:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 17:06:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 17:06:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 17:06:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 17:06:24] 
[2025-11-24 17:06:24] 2025-11-24 16:05:25,580 | INFO     | ***************************************
[2025-11-24 17:06:24] 2025-11-24 16:05:26,082 | INFO     | executing command: df -mP /scratch/.boinc/slots/6
[2025-11-24 17:06:24] 2025-11-24 16:05:26,104 | INFO     | sufficient remaining disk space (1672669560832 B)
[2025-11-24 17:06:24] 2025-11-24 16:05:26,104 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 17:06:24] 2025-11-24 16:05:26,104 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 17:06:24] 2025-11-24 16:05:26,104 | INFO     | update_server=False
[2025-11-24 17:06:24] 2025-11-24 16:05:26,104 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 17:06:24] 2025-11-24 16:05:26,169 | INFO     | all payload control threads have been joined
[2025-11-24 17:06:24] 2025-11-24 16:05:26,452 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 17:06:24] 2025-11-24 16:05:26,949 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:06:24] 2025-11-24 16:05:26,949 | INFO     | aborting loop
[2025-11-24 17:06:24] 2025-11-24 16:05:27,109 | INFO     | [job] retrieve thread has finished
[2025-11-24 17:06:24] 2025-11-24 16:05:27,174 | INFO     | [payload] control thread has finished
[2025-11-24 17:06:24] 2025-11-24 16:05:27,197 | INFO     | all data control threads have been joined
[2025-11-24 17:06:24] 2025-11-24 16:05:27,201 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 17:06:24] 2025-11-24 16:05:27,314 | INFO     | [payload] failed_post thread has finished
[2025-11-24 17:06:24] 2025-11-24 16:05:27,333 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 17:06:24] 2025-11-24 16:05:27,579 | INFO     | all job control threads have been joined
[2025-11-24 17:06:24] 2025-11-24 16:05:27,725 | INFO     | [job] validate thread has finished
[2025-11-24 17:06:24] 2025-11-24 16:05:27,783 | INFO     | [data] copytool_in thread has finished
[2025-11-24 17:06:24] 2025-11-24 16:05:27,955 | INFO     | [job] job monitor thread has finished
[2025-11-24 17:06:24] 2025-11-24 16:05:28,011 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 17:06:24] 2025-11-24 16:05:28,106 | INFO     | [payload] validate_post thread has finished
[2025-11-24 17:06:24] 2025-11-24 16:05:28,201 | INFO     | [data] control thread has finished
[2025-11-24 17:06:24] 2025-11-24 16:05:28,396 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 17:06:24] 2025-11-24 16:05:28,459 | INFO     | [data] copytool_out thread has finished
[2025-11-24 17:06:24] 2025-11-24 16:05:28,584 | INFO     | [job] control thread has finished
[2025-11-24 17:06:24] 2025-11-24 16:05:29,015 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:06:24] 2025-11-24 16:05:30,021 | INFO     | [job] queue monitor thread has finished
[2025-11-24 17:06:24] 2025-11-24 16:05:31,208 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 17:06:24] 2025-11-24 16:05:37,006 | INFO     | job.realtimelogging is not enabled
[2025-11-24 17:06:24] 2025-11-24 16:05:38,011 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 17:06:24] 2025-11-24 16:05:56,981 | INFO     | PID=3838974 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 17:06:24] 2025-11-24 16:05:56,981 | INFO     | .. there are 8 such processes running
[2025-11-24 17:06:24] 2025-11-24 16:05:56,982 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 17:06:24] 2025-11-24 16:05:56,982 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 17:06:24] 2025-11-24 16:05:56,982 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 17:06:24] 2025-11-24 16:06:17,715 | INFO     | [monitor] cgroup control has ended
[2025-11-24 17:06:24] 2025-11-24 16:06:19,200 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140368393185088)>', '<ExcThread(monitor, started 140367894660864)>']
[2025-11-24 17:06:24] 2025-11-24 16:06:20,091 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 17:06:24] 2025-11-24 16:06:20,091 | INFO     | [monitor] control thread has ended
[2025-11-24 17:06:24] 2025-11-24 16:06:24,203 | INFO     | all workflow threads have been joined
[2025-11-24 17:06:24] 2025-11-24 16:06:24,203 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 17:06:24] 2025-11-24 16:06:24,203 | INFO     | traces error code: 0
[2025-11-24 17:06:24] 2025-11-24 16:06:24,204 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 17:06:24] 2025-11-24 16:06:24,323 [wrapper] ==== pilot stdout END ====
[2025-11-24 17:06:24] 2025-11-24 16:06:24,327 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 17:06:24] 2025-11-24 16:06:24,330 [wrapper] pilotpid: 3838974
[2025-11-24 17:06:24] 2025-11-24 16:06:24,333 [wrapper] Pilot exit status: 0
[2025-11-24 17:06:24] 2025-11-24 16:06:24,346 [wrapper] pandaids: 6895339665
[2025-11-24 17:06:24] 2025-11-24 16:06:24,428 [wrapper] cleanup supervisor_pilot  150878 3838975
[2025-11-24 17:06:24] 2025-11-24 16:06:24,432 [wrapper] Test setup, not cleaning
[2025-11-24 17:06:24] 2025-11-24 16:06:24,436 [wrapper] apfmon messages muted
[2025-11-24 17:06:24] 2025-11-24 16:06:24,439 [wrapper] ==== wrapper stdout END ====
[2025-11-24 17:06:24] 2025-11-24 16:06:24,442 [wrapper] ==== wrapper stderr END ====
[2025-11-24 17:06:24]  *** Error codes and diagnostics ***
[2025-11-24 17:06:24]     "exeErrorCode": 0,
[2025-11-24 17:06:24]     "exeErrorDiag": "",
[2025-11-24 17:06:24]     "pilotErrorCode": 0,
[2025-11-24 17:06:24]     "pilotErrorDiag": "",
[2025-11-24 17:06:24]  *** Listing of results directory ***
[2025-11-24 17:06:24] total 1290380
[2025-11-24 17:06:24] -rw-r--r-- 1 boinc boinc    576529 Nov 22 11:57 pilot3.tar.gz
[2025-11-24 17:06:24] -rw-r--r-- 1 boinc boinc      5112 Nov 22 12:15 queuedata.json
[2025-11-24 17:06:24] -rwx------ 1 boinc boinc     36292 Nov 22 12:15 runpilot2-wrapper.sh
[2025-11-24 17:06:24] -rw-r--r-- 1 boinc boinc       100 Nov 24 11:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 17:06:24] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 11:48 run_atlas
[2025-11-24 17:06:24] -rw-r--r-- 1 boinc boinc       105 Nov 24 11:48 job.xml
[2025-11-24 17:06:24] -rw-r--r-- 2 boinc boinc 409763536 Nov 24 11:48 EVNT.47483658._000356.pool.root.1
[2025-11-24 17:06:24] -rw-r--r-- 1 boinc boinc      6665 Nov 24 11:48 init_data.xml
[2025-11-24 17:06:24] -rw-r--r-- 2 boinc boinc     15847 Nov 24 11:48 start_atlas.sh
[2025-11-24 17:06:24] drwxrwx--x 2 boinc boinc      4096 Nov 24 11:48 shared
[2025-11-24 17:06:24] -rw-r--r-- 2 boinc boinc    590100 Nov 24 11:48 input.tar.gz
[2025-11-24 17:06:24] -rw-r--r-- 1 boinc boinc         0 Nov 24 11:48 boinc_lockfile
[2025-11-24 17:06:24] -rw-r--r-- 1 boinc boinc      2785 Nov 24 11:48 pandaJob.out
[2025-11-24 17:06:24] -rw------- 1 boinc boinc    989824 Nov 24 11:48 agis_schedconf.cvmfs.json
[2025-11-24 17:06:24] drwx------ 5 boinc boinc      4096 Nov 24 11:48 pilot3
[2025-11-24 17:06:24] -rw-r--r-- 1 boinc boinc       533 Nov 24 16:58 boinc_task_state.xml
[2025-11-24 17:06:24] -rw------- 1 boinc boinc 898233736 Nov 24 17:04 HITS.47556137._003522.pool.root.1
[2025-11-24 17:06:24] -rw------- 1 boinc boinc      1034 Nov 24 17:05 memory_monitor_summary.json
[2025-11-24 17:06:24] -rw------- 1 boinc boinc   1516227 Nov 24 17:05 agis_ddmendpoints.agis.ALL.json
[2025-11-24 17:06:24] -rw------- 1 boinc boinc   2064073 Nov 24 17:05 log.47556137._003522.job.log.tgz.1
[2025-11-24 17:06:24] -rw------- 1 boinc boinc      8597 Nov 24 17:05 heartbeat.json
[2025-11-24 17:06:24] -rw------- 1 boinc boinc        95 Nov 24 17:05 pilot_heartbeat.json
[2025-11-24 17:06:24] -rw-r--r-- 1 boinc boinc      8192 Nov 24 17:06 boinc_mmap_file
[2025-11-24 17:06:24] -rw-r--r-- 1 boinc boinc        29 Nov 24 17:06 wrapper_checkpoint.txt
[2025-11-24 17:06:24] -rw------- 1 boinc boinc      4898 Nov 24 17:06 pilotlog.txt
[2025-11-24 17:06:24] -rw------- 1 boinc boinc   2652995 Nov 24 17:06 log.47556137._003522.job.log.1
[2025-11-24 17:06:24] -rw------- 1 boinc boinc       353 Nov 24 17:06 output.list
[2025-11-24 17:06:24] -rw-r--r-- 1 boinc boinc       620 Nov 24 17:06 runtime_log
[2025-11-24 17:06:24] -rw------- 1 boinc boinc   4741120 Nov 24 17:06 result.tar.gz
[2025-11-24 17:06:24] -rw-r--r-- 1 boinc boinc      8881 Nov 24 17:06 runtime_log.err
[2025-11-24 17:06:24] -rw------- 1 boinc boinc       671 Nov 24 17:06 3AvLDmPl0g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmY5HKDmyUqj7m.diag
[2025-11-24 17:06:24] -rw-r--r-- 1 boinc boinc     21298 Nov 24 17:06 stderr.txt
[2025-11-24 17:06:24] HITS file was successfully produced:
[2025-11-24 17:06:24] -rw------- 1 boinc boinc 898233736 Nov 24 17:04 shared/HITS.pool.root.1
[2025-11-24 17:06:24]  *** Contents of shared directory: ***
[2025-11-24 17:06:24] total 1282580
[2025-11-24 17:06:24] -rw-r--r-- 2 boinc boinc 409763536 Nov 24 11:48 ATLAS.root_0
[2025-11-24 17:06:24] -rw-r--r-- 2 boinc boinc     15847 Nov 24 11:48 start_atlas.sh
[2025-11-24 17:06:24] -rw-r--r-- 2 boinc boinc    590100 Nov 24 11:48 input.tar.gz
[2025-11-24 17:06:24] -rw------- 1 boinc boinc 898233736 Nov 24 17:04 HITS.pool.root.1
[2025-11-24 17:06:24] -rw------- 1 boinc boinc   4741120 Nov 24 17:06 result.tar.gz
17:06:26 (3834905): run_atlas exited; CPU time 217908.725263
17:06:26 (3834905): called boinc_finish(0)

</stderr_txt>
]]>

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