Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:29 (1756902): wrapper (7.7.26015): starting
00:02:29 (1756902): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 00:02:29] Arguments: --nthreads 12
[2025-11-24 00:02:29] Threads: 12
[2025-11-24 00:02:29] Checking for CVMFS
[2025-11-24 00:02:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:02:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:02:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:02:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:02:31] 2.13.2.0 6051 31081 220820 153233 0 410 38338633 40960000 11262 16776704 0 33131830 99.777 17402271 37451 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 00:02:31] CVMFS is ok
[2025-11-24 00:02:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:02:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:02:31] Further information can be found at the LHC@home message board.
[2025-11-24 00:02:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:02:31] Checking for apptainer binary...
[2025-11-24 00:02:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:02:31] Running /usr/bin/apptainer --version
[2025-11-24 00:02:32] apptainer version 1.4.4-1.el9
[2025-11-24 00:02:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:02:32] c-210-37-3.aglt2.org
[2025-11-24 00:02:32] apptainer works
[2025-11-24 00:02:32] Set ATHENA_PROC_NUMBER=12
[2025-11-24 00:02:32] Set ATHENA_CORE_NUMBER=12
[2025-11-24 00:02:32] Starting ATLAS job with PandaID=6895350895
[2025-11-24 00:02:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 12:31:15]  *** The last 200 lines of the pilot log: ***
[2025-11-24 12:31:15] 2025-11-24 17:30:41,818 | INFO     | fitting pss+swap vs Time
[2025-11-24 12:31:15] 2025-11-24 17:30:41,819 | INFO     | sum of square deviations: 122111256860.78313
[2025-11-24 12:31:15] 2025-11-24 17:30:41,845 | INFO     | sum of deviations: 1747952839496.938
[2025-11-24 12:31:15] 2025-11-24 17:30:41,845 | INFO     | mean x: 1763983073.5252388
[2025-11-24 12:31:15] 2025-11-24 17:30:41,845 | INFO     | mean y: 3456983.6521145976
[2025-11-24 12:31:15] 2025-11-24 17:30:41,845 | INFO     | intersect: -25246952368.110268
[2025-11-24 12:31:15] 2025-11-24 17:30:41,846 | INFO     | chi2: 11.979850362588433
[2025-11-24 12:31:15] 2025-11-24 17:30:41,847 | INFO     | sum of square deviations: 119630615042.56602
[2025-11-24 12:31:15] 2025-11-24 17:30:41,886 | INFO     | sum of deviations: 2049556410415.2363
[2025-11-24 12:31:15] 2025-11-24 17:30:41,887 | INFO     | mean x: 1763982921.0686812
[2025-11-24 12:31:15] 2025-11-24 17:30:41,887 | INFO     | mean y: 3475514.7953296704
[2025-11-24 12:31:15] 2025-11-24 17:30:41,887 | INFO     | intersect: -30217739200.626076
[2025-11-24 12:31:15] 2025-11-24 17:30:41,888 | INFO     | chi2: 8.582144492829002
[2025-11-24 12:31:15] 2025-11-24 17:30:41,888 | INFO     | current chi2=8.582144492829002 (change=28.361838978974557 %)
[2025-11-24 12:31:15] 2025-11-24 17:30:41,889 | INFO     | sum of square deviations: 117183834443.56291
[2025-11-24 12:31:15] 2025-11-24 17:30:41,926 | INFO     | sum of deviations: 2324321852781.696
[2025-11-24 12:31:15] 2025-11-24 17:30:41,927 | INFO     | mean x: 1763982768.6127248
[2025-11-24 12:31:15] 2025-11-24 17:30:41,927 | INFO     | mean y: 3492622.8810511758
[2025-11-24 12:31:15] 2025-11-24 17:30:41,927 | INFO     | intersect: -34984812005.361435
[2025-11-24 12:31:15] 2025-11-24 17:30:41,928 | INFO     | chi2: 5.670234617183802
[2025-11-24 12:31:15] 2025-11-24 17:30:41,928 | INFO     | current chi2=5.670234617183802 (change=33.92986307884131 %)
[2025-11-24 12:31:15] 2025-11-24 17:30:41,929 | INFO     | sum of square deviations: 114770020612.62396
[2025-11-24 12:31:15] 2025-11-24 17:30:42,048 | INFO     | sum of deviations: 2417391063558.2485
[2025-11-24 12:31:15] 2025-11-24 17:30:42,049 | INFO     | mean x: 1763982616.1364903
[2025-11-24 12:31:15] 2025-11-24 17:30:42,049 | INFO     | mean y: 3498497.2423398327
[2025-11-24 12:31:15] 2025-11-24 17:30:42,049 | INFO     | intersect: -37151115484.3414
[2025-11-24 12:31:15] 2025-11-24 17:30:42,050 | INFO     | chi2: 5.149604668503093
[2025-11-24 12:31:15] 2025-11-24 17:30:42,054 | INFO     | current chi2=5.149604668503093 (change=9.181806112624075 %)
[2025-11-24 12:31:15] 2025-11-24 17:30:42,054 | INFO     | right removable region: 717
[2025-11-24 12:31:15] 2025-11-24 17:30:42,056 | INFO     | sum of square deviations: 119627741991.42726
[2025-11-24 12:31:15] 2025-11-24 17:30:42,077 | INFO     | sum of deviations: 1407519401548.1162
[2025-11-24 12:31:15] 2025-11-24 17:30:42,077 | INFO     | mean x: 1763983226.070055
[2025-11-24 12:31:15] 2025-11-24 17:30:42,077 | INFO     | mean y: 3477888.331043956
[2025-11-24 12:31:15] 2025-11-24 17:30:42,077 | INFO     | intersect: -20751244832.064064
[2025-11-24 12:31:15] 2025-11-24 17:30:42,078 | INFO     | chi2: 8.190643583018087
[2025-11-24 12:31:15] 2025-11-24 17:30:42,078 | INFO     | current chi2=8.190643583018087 (change=31.629833970243592 %)
[2025-11-24 12:31:15] 2025-11-24 17:30:42,079 | INFO     | sum of square deviations: 117178663841.87553
[2025-11-24 12:31:15] 2025-11-24 17:30:42,101 | INFO     | sum of deviations: 1234051286712.0664
[2025-11-24 12:31:15] 2025-11-24 17:30:42,101 | INFO     | mean x: 1763983378.5975103
[2025-11-24 12:31:15] 2025-11-24 17:30:42,101 | INFO     | mean y: 3488675.481327801
[2025-11-24 12:31:15] 2025-11-24 17:30:42,101 | INFO     | intersect: -18573664252.58464
[2025-11-24 12:31:15] 2025-11-24 17:30:42,102 | INFO     | chi2: 7.223814982037257
[2025-11-24 12:31:15] 2025-11-24 17:30:42,102 | INFO     | current chi2=7.223814982037257 (change=11.804061441342478 %)
[2025-11-24 12:31:15] 2025-11-24 17:30:42,103 | INFO     | left removable region: 20
[2025-11-24 12:31:15] 2025-11-24 17:30:42,108 | INFO     | sum of square deviations: 104988882051.87599
[2025-11-24 12:31:15] 2025-11-24 17:30:42,126 | INFO     | sum of deviations: 1752439973048.5405
[2025-11-24 12:31:15] 2025-11-24 17:30:42,127 | INFO     | mean x: 1763983195.7087517
[2025-11-24 12:31:15] 2025-11-24 17:30:42,127 | INFO     | mean y: 3542073.1406025826
[2025-11-24 12:31:15] 2025-11-24 17:30:42,127 | INFO     | intersect: -29440286678.350395
[2025-11-24 12:31:15] 2025-11-24 17:30:42,128 | INFO     | chi2: 0.09955191907426238
[2025-11-24 12:31:15] 2025-11-24 17:30:42,133 | INFO     | current memory leak: 16.69 B/s (using 697 data points, chi2=0.10)
[2025-11-24 12:31:15] 2025-11-24 17:30:42,134 | INFO     | could have reported an average CPU frequency of 2774 MHz (28 samples)
[2025-11-24 12:31:15] 2025-11-24 17:30:42,134 | INFO     | ..............................
[2025-11-24 12:31:15] 2025-11-24 17:30:42,134 | INFO     | . Timing measurements:
[2025-11-24 12:31:15] 2025-11-24 17:30:42,135 | INFO     | . get job = 0 s
[2025-11-24 12:31:15] 2025-11-24 17:30:42,135 | INFO     | . initial setup = 4 s
[2025-11-24 12:31:15] 2025-11-24 17:30:42,135 | INFO     | . payload setup = 39 s
[2025-11-24 12:31:15] 2025-11-24 17:30:42,135 | INFO     | . stage-in = 0 s
[2025-11-24 12:31:15] 2025-11-24 17:30:42,135 | INFO     | . payload execution = 44683 s
[2025-11-24 12:31:15] 2025-11-24 17:30:42,135 | INFO     | . stage-out = 6 s
[2025-11-24 12:31:15] 2025-11-24 17:30:42,135 | INFO     | . log creation = 1 s
[2025-11-24 12:31:15] 2025-11-24 17:30:42,135 | INFO     | ..............................
[2025-11-24 12:31:15] 2025-11-24 17:30:42,316 | INFO     | 
[2025-11-24 12:31:15] 2025-11-24 17:30:42,316 | INFO     | job summary report
[2025-11-24 12:31:15] 2025-11-24 17:30:42,316 | INFO     | --------------------------------------------------
[2025-11-24 12:31:15] 2025-11-24 17:30:42,316 | INFO     | PanDA job id: 6895350895
[2025-11-24 12:31:15] 2025-11-24 17:30:42,316 | INFO     | task id: 47556137
[2025-11-24 12:31:15] 2025-11-24 17:30:42,316 | INFO     | errors: (none)
[2025-11-24 12:31:15] 2025-11-24 17:30:42,316 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 12:31:15] 2025-11-24 17:30:42,317 | INFO     | pilot state: finished 
[2025-11-24 12:31:15] 2025-11-24 17:30:42,317 | INFO     | transexitcode: 0
[2025-11-24 12:31:15] 2025-11-24 17:30:42,317 | INFO     | exeerrorcode: 0
[2025-11-24 12:31:15] 2025-11-24 17:30:42,317 | INFO     | exeerrordiag: 
[2025-11-24 12:31:15] 2025-11-24 17:30:42,317 | INFO     | exitcode: 0
[2025-11-24 12:31:15] 2025-11-24 17:30:42,317 | INFO     | exitmsg: OK
[2025-11-24 12:31:15] 2025-11-24 17:30:42,317 | INFO     | cpuconsumptiontime: 232372 s
[2025-11-24 12:31:15] 2025-11-24 17:30:42,317 | INFO     | nevents: 1000
[2025-11-24 12:31:15] 2025-11-24 17:30:42,317 | INFO     | neventsw: 0
[2025-11-24 12:31:15] 2025-11-24 17:30:42,317 | INFO     | pid: 1768625
[2025-11-24 12:31:15] 2025-11-24 17:30:42,317 | INFO     | pgrp: 1768625
[2025-11-24 12:31:15] 2025-11-24 17:30:42,317 | INFO     | corecount: 12
[2025-11-24 12:31:15] 2025-11-24 17:30:42,317 | INFO     | event service: False
[2025-11-24 12:31:15] 2025-11-24 17:30:42,317 | INFO     | sizes: {0: 2298528, 1: 2298783, 2: 2298811, 12: 2298811, 23: 2298839, 29: 2299129, 34: 2299285, 44727: 2345907, 44728: 2345906, 44735: 2355747, 44737: 2355803, 447
[2025-11-24 12:31:15] 2025-11-24 17:30:42,317 | INFO     | --------------------------------------------------
[2025-11-24 12:31:15] 2025-11-24 17:30:42,317 | INFO     | 
[2025-11-24 12:31:15] 2025-11-24 17:30:42,318 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 12:31:15] 2025-11-24 17:30:42,374 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 12:31:15] 2025-11-24 17:30:42,375 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 12:31:15] 2025-11-24 17:30:42,375 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 12:31:15] 2025-11-24 17:30:42,375 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 12:31:15] 2025-11-24 17:30:42,375 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 12:31:15] 2025-11-24 17:30:42,375 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 12:31:15] 2025-11-24 17:30:42,375 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 12:31:15] 2025-11-24 17:30:42,375 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 12:31:15] 2025-11-24 17:30:42,375 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 12:31:15] 2025-11-24 17:30:42,375 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 12:31:15] 2025-11-24 17:30:42,375 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 12:31:15] 2025-11-24 17:30:42,376 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 12:31:15] 2025-11-24 17:30:42,376 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 12:31:15] 2025-11-24 17:30:42,376 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 12:31:15] 2025-11-24 17:30:42,376 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 12:31:15] 2025-11-24 17:30:42,376 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 12:31:15] 2025-11-24 17:30:42,376 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 12:31:15] 2025-11-24 17:30:42,376 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 12:31:15] 2025-11-24 17:30:42,376 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 12:31:15] 2025-11-24 17:30:42,376 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 12:31:15] 2025-11-24 17:30:42,376 | INFO     | job 6895350895 has completed (purged errors)
[2025-11-24 12:31:15] 2025-11-24 17:30:42,377 | INFO     | overall cleanup function is called
[2025-11-24 12:31:15] 2025-11-24 17:30:43,411 | INFO     | --- collectZombieJob: --- 10, [1768625]
[2025-11-24 12:31:15] 2025-11-24 17:30:43,412 | INFO     | zombie collector waiting for pid 1768625
[2025-11-24 12:31:15] 2025-11-24 17:30:43,412 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 12:31:15] 2025-11-24 17:30:43,412 | INFO     | collected zombie processes
[2025-11-24 12:31:15] 2025-11-24 17:30:43,412 | INFO     | will attempt to kill all subprocesses of pid=1768625
[2025-11-24 12:31:15] 2025-11-24 17:30:44,120 | INFO     | process IDs to be killed: [1768625] (in reverse order)
[2025-11-24 12:31:15] 2025-11-24 17:30:44,392 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 12:31:15] 2025-11-24 17:30:44,392 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 12:31:15] 2025-11-24 17:30:44,411 | INFO     | did not find any defunct processes belonging to 1768625
[2025-11-24 12:31:15] 2025-11-24 17:30:44,442 | INFO     | did not find any defunct processes belonging to 1768625
[2025-11-24 12:31:15] 2025-11-24 17:30:44,446 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 12:31:15] 2025-11-24 17:30:44,446 | INFO     | ready for new job
[2025-11-24 12:31:15] 2025-11-24 17:30:44,447 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 12:31:15] 2025-11-24 17:30:44,458 | INFO     | ***************************************
[2025-11-24 12:31:15] 2025-11-24 17:30:44,458 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 12:31:15] 2025-11-24 17:30:44,458 | INFO     | ***************************************
[2025-11-24 12:31:15] 2025-11-24 17:30:44,459 | INFO     | 
[2025-11-24 12:31:15] 2025-11-24 17:30:44,461 | INFO     | architecture information:
[2025-11-24 12:31:15] 2025-11-24 17:30:44,471 | INFO     | executing command: cat /etc/os-release
[2025-11-24 12:31:15] 2025-11-24 17:30:44,514 | INFO     | cat /etc/os-release:
[2025-11-24 12:31:15] NAME="CentOS Linux"
[2025-11-24 12:31:15] VERSION="7 (Core)"
[2025-11-24 12:31:15] ID="centos"
[2025-11-24 12:31:15] ID_LIKE="rhel fedora"
[2025-11-24 12:31:15] VERSION_ID="7"
[2025-11-24 12:31:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 12:31:15] ANSI_COLOR="0;31"
[2025-11-24 12:31:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 12:31:15] HOME_URL="https://www.centos.org/"
[2025-11-24 12:31:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 12:31:15] 
[2025-11-24 12:31:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 12:31:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 12:31:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 12:31:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 12:31:15] 
[2025-11-24 12:31:15] 2025-11-24 17:30:44,515 | INFO     | ***************************************
[2025-11-24 12:31:15] 2025-11-24 17:30:45,018 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 12:31:15] 2025-11-24 17:30:45,137 | INFO     | sufficient remaining disk space (71157415936 B)
[2025-11-24 12:31:15] 2025-11-24 17:30:45,137 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 12:31:15] 2025-11-24 17:30:45,138 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 12:31:15] 2025-11-24 17:30:45,138 | INFO     | update_server=False
[2025-11-24 12:31:15] 2025-11-24 17:30:45,138 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 12:31:15] 2025-11-24 17:30:45,179 | INFO     | all data control threads have been joined
[2025-11-24 12:31:15] 2025-11-24 17:30:45,221 | INFO     | all job control threads have been joined
[2025-11-24 12:31:15] 2025-11-24 17:30:45,593 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 12:31:15] 2025-11-24 17:30:45,593 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 12:31:15] 2025-11-24 17:30:45,593 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 12:31:15] 2025-11-24 17:30:45,593 | INFO     | will abort loop
[2025-11-24 12:31:15] 2025-11-24 17:30:45,690 | INFO     | all payload control threads have been joined
[2025-11-24 12:31:15] 2025-11-24 17:30:46,144 | INFO     | [job] retrieve thread has finished
[2025-11-24 12:31:15] 2025-11-24 17:30:46,185 | INFO     | [data] control thread has finished
[2025-11-24 12:31:15] 2025-11-24 17:30:46,226 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 12:31:15] 2025-11-24 17:30:46,226 | INFO     | [job] control thread has finished
[2025-11-24 12:31:15] 2025-11-24 17:30:46,360 | INFO     | [data] copytool_in thread has finished
[2025-11-24 12:31:15] 2025-11-24 17:30:46,361 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 12:31:15] 2025-11-24 17:30:46,416 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 12:31:15] 2025-11-24 17:30:46,599 | INFO     | [job] job monitor thread has finished
[2025-11-24 12:31:15] 2025-11-24 17:30:46,689 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 12:31:15] 2025-11-24 17:30:46,696 | INFO     | [payload] control thread has finished
[2025-11-24 12:31:15] 2025-11-24 17:30:46,725 | INFO     | [payload] failed_post thread has finished
[2025-11-24 12:31:15] 2025-11-24 17:30:47,087 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 12:31:15] 2025-11-24 17:30:47,245 | INFO     | [payload] validate_post thread has finished
[2025-11-24 12:31:15] 2025-11-24 17:30:47,257 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 12:31:15] 2025-11-24 17:30:47,348 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 12:31:15] 2025-11-24 17:30:47,560 | INFO     | [job] validate thread has finished
[2025-11-24 12:31:15] 2025-11-24 17:30:48,251 | INFO     | [data] copytool_out thread has finished
[2025-11-24 12:31:15] 2025-11-24 17:30:48,354 | INFO     | [job] queue monitor thread has finished
[2025-11-24 12:31:15] 2025-11-24 17:30:50,970 | INFO     | [monitor] cgroup control has ended
[2025-11-24 12:31:15] 2025-11-24 17:30:51,278 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 12:31:15] 2025-11-24 17:30:52,266 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140466682206016)>', '<ExcThread(monitor, started 140465940711168)>']
[2025-11-24 12:31:15] 2025-11-24 17:30:57,300 | INFO     | all workflow threads have been joined
[2025-11-24 12:31:15] 2025-11-24 17:30:57,300 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 12:31:15] 2025-11-24 17:30:57,301 | INFO     | traces error code: 0
[2025-11-24 12:31:15] 2025-11-24 17:30:57,301 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 12:31:15] 2025-11-24 17:31:14,199 | INFO     | PID=1760639 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 12:31:15] 2025-11-24 17:31:14,199 | INFO     | .. there are 10 such processes running
[2025-11-24 12:31:15] 2025-11-24 17:31:14,200 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 12:31:15] 2025-11-24 17:31:14,200 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 12:31:15] 2025-11-24 17:31:14,200 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 12:31:15] 2025-11-24 17:31:14,202 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 12:31:15] 2025-11-24 17:31:14,202 | INFO     | [monitor] control thread has ended
[2025-11-24 12:31:15] 2025-11-24 17:31:14,521 [wrapper] ==== pilot stdout END ====
[2025-11-24 12:31:15] 2025-11-24 17:31:14,537 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 12:31:15] 2025-11-24 17:31:14,550 [wrapper] pilotpid: 1760639
[2025-11-24 12:31:15] 2025-11-24 17:31:14,553 [wrapper] Pilot exit status: 0
[2025-11-24 12:31:15] 2025-11-24 17:31:14,594 [wrapper] pandaids: 6895350895
[2025-11-24 12:31:15] 2025-11-24 17:31:14,703 [wrapper] cleanup supervisor_pilot 2753953 1760640
[2025-11-24 12:31:15] 2025-11-24 17:31:14,706 [wrapper] Test setup, not cleaning
[2025-11-24 12:31:15] 2025-11-24 17:31:14,709 [wrapper] apfmon messages muted
[2025-11-24 12:31:15] 2025-11-24 17:31:14,735 [wrapper] ==== wrapper stdout END ====
[2025-11-24 12:31:15] 2025-11-24 17:31:14,755 [wrapper] ==== wrapper stderr END ====
[2025-11-24 12:31:15]  *** Error codes and diagnostics ***
[2025-11-24 12:31:15]     "exeErrorCode": 0,
[2025-11-24 12:31:15]     "exeErrorDiag": "",
[2025-11-24 12:31:15]     "pilotErrorCode": 0,
[2025-11-24 12:31:15]     "pilotErrorDiag": "",
[2025-11-24 12:31:15]  *** Listing of results directory ***
[2025-11-24 12:31:15] total 1305676
[2025-11-24 12:31:15] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 17:07 pilot3.tar.gz
[2025-11-24 12:31:15] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 17:31 queuedata.json
[2025-11-24 12:31:15] -rwx------. 1 boincer umatlas     36292 Nov 22 17:33 runpilot2-wrapper.sh
[2025-11-24 12:31:15] -rw-r--r--. 1 boincer umatlas       100 Nov 24 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 12:31:15] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 00:02 run_atlas
[2025-11-24 12:31:15] -rw-r--r--. 1 boincer umatlas       105 Nov 24 00:02 job.xml
[2025-11-24 12:31:15] -rw-r--r--. 2 boincer umatlas 408952969 Nov 24 00:02 EVNT.47483658._000527.pool.root.1
[2025-11-24 12:31:15] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:02 start_atlas.sh
[2025-11-24 12:31:15] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 00:02 shared
[2025-11-24 12:31:15] -rw-r--r--. 2 boincer umatlas    590099 Nov 24 00:02 input.tar.gz
[2025-11-24 12:31:15] -rw-r--r--. 1 boincer umatlas         0 Nov 24 00:02 boinc_lockfile
[2025-11-24 12:31:15] -rw-r--r--. 1 boincer umatlas      2784 Nov 24 00:02 pandaJob.out
[2025-11-24 12:31:15] -rw-------. 1 boincer umatlas        57 Nov 24 00:02 setup.sh.local
[2025-11-24 12:31:15] -rw-------. 1 boincer umatlas    989786 Nov 24 00:03 agis_schedconf.cvmfs.json
[2025-11-24 12:31:15] drwx------. 5 boincer umatlas      4096 Nov 24 00:03 pilot3
[2025-11-24 12:31:15] -rw-r--r--. 1 boincer umatlas       533 Nov 24 12:13 boinc_task_state.xml
[2025-11-24 12:31:15] -rw-------. 1 boincer umatlas 907105988 Nov 24 12:28 HITS.47556137._005222.pool.root.1
[2025-11-24 12:31:15] -rw-------. 1 boincer umatlas      1053 Nov 24 12:29 memory_monitor_summary.json
[2025-11-24 12:31:15] -rw-------. 1 boincer umatlas   1516227 Nov 24 12:30 agis_ddmendpoints.agis.ALL.json
[2025-11-24 12:31:15] -rw-------. 1 boincer umatlas   2428732 Nov 24 12:30 log.47556137._005222.job.log.tgz.1
[2025-11-24 12:31:15] -rw-------. 1 boincer umatlas      8626 Nov 24 12:30 heartbeat.json
[2025-11-24 12:31:15] -rw-r--r--. 1 boincer umatlas      6843 Nov 24 12:30 init_data.xml
[2025-11-24 12:31:15] -rw-r--r--. 1 boincer umatlas        29 Nov 24 12:31 wrapper_checkpoint.txt
[2025-11-24 12:31:15] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 12:31 boinc_mmap_file
[2025-11-24 12:31:15] -rw-------. 1 boincer umatlas        95 Nov 24 12:31 pilot_heartbeat.json
[2025-11-24 12:31:15] -rw-------. 1 boincer umatlas       823 Nov 24 12:31 pilotlog.txt
[2025-11-24 12:31:15] -rw-------. 1 boincer umatlas   6089427 Nov 24 12:31 log.47556137._005222.job.log.1
[2025-11-24 12:31:15] -rw-------. 1 boincer umatlas       353 Nov 24 12:31 output.list
[2025-11-24 12:31:15] -rw-r--r--. 1 boincer umatlas       620 Nov 24 12:31 runtime_log
[2025-11-24 12:31:15] -rw-------. 1 boincer umatlas   8540160 Nov 24 12:31 result.tar.gz
[2025-11-24 12:31:15] -rw-r--r--. 1 boincer umatlas      9355 Nov 24 12:31 runtime_log.err
[2025-11-24 12:31:15] -rw-------. 1 boincer umatlas       662 Nov 24 12:31 iBYKDmQLBh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdKIKDmMLJrLo.diag
[2025-11-24 12:31:15] -rw-r--r--. 1 boincer umatlas     21213 Nov 24 12:31 stderr.txt
[2025-11-24 12:31:15] HITS file was successfully produced:
[2025-11-24 12:31:15] -rw-------. 1 boincer umatlas 907105988 Nov 24 12:28 shared/HITS.pool.root.1
[2025-11-24 12:31:15]  *** Contents of shared directory: ***
[2025-11-24 12:31:15] total 1294164
[2025-11-24 12:31:15] -rw-r--r--. 2 boincer umatlas 408952969 Nov 24 00:02 ATLAS.root_0
[2025-11-24 12:31:15] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:02 start_atlas.sh
[2025-11-24 12:31:15] -rw-r--r--. 2 boincer umatlas    590099 Nov 24 00:02 input.tar.gz
[2025-11-24 12:31:15] -rw-------. 1 boincer umatlas 907105988 Nov 24 12:28 HITS.pool.root.1
[2025-11-24 12:31:15] -rw-------. 1 boincer umatlas   8540160 Nov 24 12:31 result.tar.gz
12:31:16 (1756902): run_atlas exited; CPU time 232305.570994
12:31:16 (1756902): called boinc_finish(0)

</stderr_txt>
]]>

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