Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:05:50 (3055973): wrapper (7.7.26015): starting
11:05:50 (3055973): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 11:05:50] Arguments: --nthreads 8
[2025-11-23 11:05:50] Threads: 8
[2025-11-23 11:05:50] Checking for CVMFS
[2025-11-23 11:05:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 11:05:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 11:05:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 11:05:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 11:05:50] 2.11.3.0 2934339 24447 147876 153217 2 394 35285227 45568000 8754 130560 0 158973602 99.793 97770094 26131 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-23 11:05:50] CVMFS is ok
[2025-11-23 11:05:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 11:05:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 11:05:50] Further information can be found at the LHC@home message board.
[2025-11-23 11:05:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 11:05:50] Checking for apptainer binary...
[2025-11-23 11:05:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 11:05:50] Running /usr/bin/apptainer --version
[2025-11-23 11:05:50] apptainer version 1.4.1-1.el9
[2025-11-23 11:05:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 11:05:51] wns0004.triumf.lcg
[2025-11-23 11:05:51] apptainer works
[2025-11-23 11:05:51] Set ATHENA_PROC_NUMBER=8
[2025-11-23 11:05:51] Set ATHENA_CORE_NUMBER=8
[2025-11-23 11:05:51] Starting ATLAS job with PandaID=6895356200
[2025-11-23 11:05:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 11:13:18]  *** The last 200 lines of the pilot log: ***
[2025-11-23 11:13:18] 2025-11-23 19:12:21,000 | WARNING  | wrong length of table data, x=[1763924837.0, 1763924898.0, 1763924959.0], y=[1226.0, 509158.0, 519772.0] (must be same and length>=4)
[2025-11-23 11:13:18] 2025-11-23 19:12:21,001 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-23 11:13:18] 2025-11-23 19:12:21,001 | INFO     | ..............................
[2025-11-23 11:13:18] 2025-11-23 19:12:21,001 | INFO     | . Timing measurements:
[2025-11-23 11:13:18] 2025-11-23 19:12:21,001 | INFO     | . get job = 0 s
[2025-11-23 11:13:18] 2025-11-23 19:12:21,001 | INFO     | . initial setup = 3 s
[2025-11-23 11:13:18] 2025-11-23 19:12:21,001 | INFO     | . payload setup = 16 s
[2025-11-23 11:13:18] 2025-11-23 19:12:21,001 | INFO     | . stage-in = 0 s
[2025-11-23 11:13:18] 2025-11-23 19:12:21,001 | INFO     | . payload execution = 176 s
[2025-11-23 11:13:18] 2025-11-23 19:12:21,001 | INFO     | . stage-out = 0 s
[2025-11-23 11:13:18] 2025-11-23 19:12:21,001 | INFO     | . log creation = 0 s
[2025-11-23 11:13:18] 2025-11-23 19:12:21,001 | INFO     | ..............................
[2025-11-23 11:13:18] 2025-11-23 19:12:21,002 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-23 11:13:18] 2025-11-23 19:12:21,002 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895356200/pilotlog.txt
[2025-11-23 11:13:18] 2025-11-23 19:12:21,016 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-23 11:13:18] - Log from pilotlog.txt -
[2025-11-23 11:13:18] 2025-11-23 19:12:20,980 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895356200/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 11:13:18] 2025-11-23 19:12:20,981 | INFO     | extracted standard info from prmon json
[2025-11-23 11:13:18] 2025-11-23 19:12:20,981 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 11:13:18] 2025-11-23 19:12:20,981 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 11:13:18] 2025-11-23 19:12:20,981 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-23 11:13:18] 2025-11-23 19:12:20,981 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-23 11:13:18] 2025-11-23 19:12:21,000 | WARNING  | wrong length of table data, x=[1763924837.0, 1763924898.0, 1763924959.0], y=[1226.0, 509158.0, 519772.0] (must be same and length>=4)
[2025-11-23 11:13:18] 2025-11-23 19:12:21,001 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-23 11:13:18] 2025-11-23 19:12:21,001 | INFO     | ..............................
[2025-11-23 11:13:18] 2025-11-23 19:12:21,001 | INFO     | . Timing measurements:
[2025-11-23 11:13:18] 2025-11-23 19:12:21,001 | INFO     | . get job = 0 s
[2025-11-23 11:13:18] 2025-11-23 19:12:21,001 | INFO     | . initial setup = 3 s
[2025-11-23 11:13:18] 2025-11-23 19:12:21,001 | INFO     | . payload setup = 16 s
[2025-11-23 11:13:18] 2025-11-23 19:12:21,001 | INFO     | . stage-in = 0 s
[2025-11-23 11:13:18] 2025-11-23 19:12:21,001 | INFO     | . payload execution = 176 s
[2025-11-23 11:13:18] 2025-11-23 19:12:21,001 | INFO     | . stage-out = 0 s
[2025-11-23 11:13:18] 2025-11-23 19:12:21,001 | INFO     | . log creation = 0 s
[2025-11-23 11:13:18] 2025-11-23 19:12:21,001 | INFO     | ..............................
[2025-11-23 11:13:18] 2025-11-23 19:12:21,002 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-23 11:13:18] 2025-11-23 19:12:21,002 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895356200/pilotlog.txt
[2025-11-23 11:13:18] 2025-11-23 19:12:21,016 | WARNING  | 
[2025-11-23 11:13:18] [begin log extracts]
[2025-11-23 11:13:18] - Log from pilotlog.txt -
[2025-11-23 11:13:18] 2025-11-23 19:12:20,980 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895356200/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 11:13:18] 2025-11-23 19:12:20,981 | INFO     | extracted standard info from prmon json
[2025-11-23 11:13:18] 2025-11-23 19:12:20,981 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 11:13:18] 2025-11-23 19:12:20,981 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 11:13:18] 2025-11-23 19:12:20,981 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-23 11:13:18] 2025-11-23 19:12:20,981 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-23 11:13:18] 2025-11-23 19:12:21,000 | WARNING  | wrong length of table data, x=[1763924837.0, 1763924898.0, 1763924959.0], y=[1226.0, 509158.0, 519772.0] (must be same and length>=4)
[2025-11-23 11:13:18] 2025-11-23 19:12:21,001 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-23 11:13:18] 2025-11-23 19:12:21,001 | INFO     | ..............................
[2025-11-23 11:13:18] 2025-11-23 19:12:21,001 | INFO     | . Timing measurements:
[2025-11-23 11:13:18] 2025-11-23 19:12:21,001 | INFO     | . get job = 0 s
[2025-11-23 11:13:18] 2025-11-23 19:12:21,001 | INFO     | . initial setup = 3 s
[2025-11-23 11:13:18] 2025-11-23 19:12:21,001 | INFO     | . payload setup = 16 s
[2025-11-23 11:13:18] 2025-11-23 19:12:21,001 | INFO     | . stage-in = 0 s
[2025-11-23 11:13:18] 2025-11-23 19:12:21,001 | INFO     | . payload execution = 176 s
[2025-11-23 11:13:18] 2025-11-23 19:12:21,001 | INFO     | . stage-out = 0 s
[2025-11-23 11:13:18] 2025-11-23 19:12:21,001 | INFO     | . log creation = 0 s
[2025-11-23 11:13:18] 2025-11-23 19:12:21,001 | INFO     | ..............................
[2025-11-23 11:13:18] 2025-11-23 19:12:21,002 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-23 11:13:18] 2025-11-23 19:12:21,002 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895356200/pilotlog.txt
[2025-11-23 11:13:18] [end log extracts]
[2025-11-23 11:13:18] 2025-11-23 19:12:21,016 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-23 11:13:18] 2025-11-23 19:12:21,017 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-23 11:13:18] 2025-11-23 19:12:21,268 | INFO     | time since job start (372s) is within the limit (172800.0s)
[2025-11-23 11:13:18] 2025-11-23 19:12:21,315 | INFO     | 
[2025-11-23 11:13:18] 2025-11-23 19:12:21,315 | INFO     | job summary report
[2025-11-23 11:13:18] 2025-11-23 19:12:21,315 | INFO     | --------------------------------------------------
[2025-11-23 11:13:18] 2025-11-23 19:12:21,315 | INFO     | PanDA job id: 6895356200
[2025-11-23 11:13:18] 2025-11-23 19:12:21,316 | INFO     | task id: 47556137
[2025-11-23 11:13:18] 2025-11-23 19:12:21,316 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-23 11:09:54,962 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-23 11:13:18] 2025-11-23 19:12:21,316 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-23 11:13:18] 2025-11-23 19:12:21,316 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 11:13:18] 2025-11-23 19:12:21,316 | INFO     | pilot state: failed 
[2025-11-23 11:13:18] 2025-11-23 19:12:21,316 | INFO     | transexitcode: 65
[2025-11-23 11:13:18] 2025-11-23 19:12:21,316 | INFO     | exeerrorcode: 65
[2025-11-23 11:13:18] 2025-11-23 19:12:21,316 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-23 11:13:18] 2025-11-23 19:12:21,316 | INFO     | exitcode: 65
[2025-11-23 11:13:18] 2025-11-23 19:12:21,316 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-23 11:13:18] 2025-11-23 19:12:21,316 | INFO     | cpuconsumptiontime: 53 s
[2025-11-23 11:13:18] 2025-11-23 19:12:21,316 | INFO     | nevents: 0
[2025-11-23 11:13:18] 2025-11-23 19:12:21,316 | INFO     | neventsw: 0
[2025-11-23 11:13:18] 2025-11-23 19:12:21,317 | INFO     | pid: 3066506
[2025-11-23 11:13:18] 2025-11-23 19:12:21,317 | INFO     | pgrp: 3066506
[2025-11-23 11:13:18] 2025-11-23 19:12:21,317 | INFO     | corecount: 8
[2025-11-23 11:13:18] 2025-11-23 19:12:21,317 | INFO     | event service: False
[2025-11-23 11:13:18] 2025-11-23 19:12:21,317 | INFO     | sizes: {0: 2298576, 1: 2298775, 12: 2299065, 23: 2299065, 197: 2324506, 198: 2324482, 199: 2328928, 202: 2328984, 333: 2329150}
[2025-11-23 11:13:18] 2025-11-23 19:12:21,317 | INFO     | --------------------------------------------------
[2025-11-23 11:13:18] 2025-11-23 19:12:21,317 | INFO     | 
[2025-11-23 11:13:18] 2025-11-23 19:12:21,317 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-23 11:13:18] 2025-11-23 19:12:21,345 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 11:13:18] 2025-11-23 19:12:21,346 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 11:13:18] 2025-11-23 19:12:21,346 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 11:13:18] 2025-11-23 19:12:21,346 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 11:13:18] 2025-11-23 19:12:21,346 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 11:13:18] 2025-11-23 19:12:21,346 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 11:13:18] 2025-11-23 19:12:21,346 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 11:13:18] 2025-11-23 19:12:21,346 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 11:13:18] 2025-11-23 19:12:21,346 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 11:13:18] 2025-11-23 19:12:21,346 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 11:13:18] 2025-11-23 19:12:21,346 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 11:13:18] 2025-11-23 19:12:21,346 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 11:13:18] 2025-11-23 19:12:21,347 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 11:13:18] 2025-11-23 19:12:21,347 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 11:13:18] 2025-11-23 19:12:21,347 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 11:13:18] 2025-11-23 19:12:21,347 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 11:13:18] 2025-11-23 19:12:21,347 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 11:13:18] 2025-11-23 19:12:21,347 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 11:13:18] 2025-11-23 19:12:21,347 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 11:13:18] 2025-11-23 19:12:21,347 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 11:13:18] 2025-11-23 19:12:21,347 | INFO     | job 6895356200 has completed (purged errors)
[2025-11-23 11:13:18] 2025-11-23 19:12:21,347 | INFO     | overall cleanup function is called
[2025-11-23 11:13:18] 2025-11-23 19:12:22,355 | INFO     | --- collectZombieJob: --- 10, [3066506]
[2025-11-23 11:13:18] 2025-11-23 19:12:22,355 | INFO     | zombie collector waiting for pid 3066506
[2025-11-23 11:13:18] 2025-11-23 19:12:22,355 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 11:13:18] 2025-11-23 19:12:22,355 | INFO     | collected zombie processes
[2025-11-23 11:13:18] 2025-11-23 19:12:22,356 | INFO     | will attempt to kill all subprocesses of pid=3066506
[2025-11-23 11:13:18] 2025-11-23 19:12:22,507 | INFO     | process IDs to be killed: [3066506] (in reverse order)
[2025-11-23 11:13:18] 2025-11-23 19:12:22,558 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 11:13:18] 2025-11-23 19:12:22,559 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 11:13:18] 2025-11-23 19:12:22,570 | INFO     | did not find any defunct processes belonging to 3066506
[2025-11-23 11:13:18] 2025-11-23 19:12:22,584 | INFO     | did not find any defunct processes belonging to 3066506
[2025-11-23 11:13:18] 2025-11-23 19:12:22,589 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 11:13:18] 2025-11-23 19:12:22,589 | INFO     | ready for new job
[2025-11-23 11:13:18] 2025-11-23 19:12:22,589 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 11:13:18] 2025-11-23 19:12:22,590 | INFO     | ***************************************
[2025-11-23 11:13:18] 2025-11-23 19:12:22,590 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 11:13:18] 2025-11-23 19:12:22,590 | INFO     | ***************************************
[2025-11-23 11:13:18] 2025-11-23 19:12:22,590 | INFO     | 
[2025-11-23 11:13:18] 2025-11-23 19:12:22,592 | INFO     | architecture information:
[2025-11-23 11:13:18] 2025-11-23 19:12:22,598 | INFO     | executing command: cat /etc/os-release
[2025-11-23 11:13:18] 2025-11-23 19:12:22,658 | INFO     | cat /etc/os-release:
[2025-11-23 11:13:18] NAME="CentOS Linux"
[2025-11-23 11:13:18] VERSION="7 (Core)"
[2025-11-23 11:13:18] ID="centos"
[2025-11-23 11:13:18] ID_LIKE="rhel fedora"
[2025-11-23 11:13:18] VERSION_ID="7"
[2025-11-23 11:13:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 11:13:18] ANSI_COLOR="0;31"
[2025-11-23 11:13:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 11:13:18] HOME_URL="https://www.centos.org/"
[2025-11-23 11:13:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 11:13:18] 
[2025-11-23 11:13:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 11:13:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 11:13:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 11:13:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 11:13:18] 
[2025-11-23 11:13:18] 2025-11-23 19:12:22,658 | INFO     | ***************************************
[2025-11-23 11:13:18] 2025-11-23 19:12:23,163 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-23 11:13:18] 2025-11-23 19:12:23,299 | INFO     | sufficient remaining disk space (1233792270336 B)
[2025-11-23 11:13:18] 2025-11-23 19:12:23,300 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 11:13:18] 2025-11-23 19:12:23,300 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 11:13:18] 2025-11-23 19:12:23,300 | INFO     | update_server=False
[2025-11-23 11:13:18] 2025-11-23 19:12:23,300 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 11:13:18] 2025-11-23 19:12:23,301 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 11:13:18] 2025-11-23 19:12:23,322 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 11:13:18] 2025-11-23 19:12:23,404 | INFO     | all data control threads have been joined
[2025-11-23 11:13:18] 2025-11-23 19:12:23,934 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 11:13:18] 2025-11-23 19:12:23,934 | INFO     | aborting loop
[2025-11-23 11:13:18] 2025-11-23 19:12:24,035 | INFO     | all job control threads have been joined
[2025-11-23 11:13:18] 2025-11-23 19:12:24,069 | INFO     | all payload control threads have been joined
[2025-11-23 11:13:18] 2025-11-23 19:12:24,306 | INFO     | [job] retrieve thread has finished
[2025-11-23 11:13:18] 2025-11-23 19:12:24,360 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 11:13:18] 2025-11-23 19:12:24,410 | INFO     | [data] control thread has finished
[2025-11-23 11:13:18] 2025-11-23 19:12:24,494 | INFO     | [payload] validate_post thread has finished
[2025-11-23 11:13:18] 2025-11-23 19:12:24,520 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 11:13:18] 2025-11-23 19:12:24,746 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 11:13:18] 2025-11-23 19:12:24,940 | INFO     | [job] job monitor thread has finished
[2025-11-23 11:13:18] 2025-11-23 19:12:25,042 | INFO     | [job] control thread has finished
[2025-11-23 11:13:18] 2025-11-23 19:12:25,075 | INFO     | [payload] control thread has finished
[2025-11-23 11:13:18] 2025-11-23 19:12:25,156 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 11:13:18] 2025-11-23 19:12:25,308 | INFO     | [data] copytool_out thread has finished
[2025-11-23 11:13:18] 2025-11-23 19:12:25,406 | INFO     | [payload] failed_post thread has finished
[2025-11-23 11:13:18] 2025-11-23 19:12:25,474 | INFO     | [data] copytool_in thread has finished
[2025-11-23 11:13:18] 2025-11-23 19:12:25,503 | INFO     | [job] validate thread has finished
[2025-11-23 11:13:18] 2025-11-23 19:12:26,108 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 11:13:18] 2025-11-23 19:12:27,114 | INFO     | [job] queue monitor thread has finished
[2025-11-23 11:13:18] 2025-11-23 19:12:27,336 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 11:13:18] 2025-11-23 19:12:54,845 | INFO     | PID=3059926 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 11:13:18] 2025-11-23 19:12:54,845 | INFO     | .. there are 12 such processes running
[2025-11-23 11:13:18] 2025-11-23 19:12:54,845 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 11:13:18] 2025-11-23 19:12:54,854 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 11:13:18] 2025-11-23 19:12:54,854 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 11:13:18] 2025-11-23 19:13:09,230 | INFO     | [monitor] cgroup control has ended
[2025-11-23 11:13:18] 2025-11-23 19:13:10,519 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139859066111808)>', '<ExcThread(monitor, started 139858672600832)>']
[2025-11-23 11:13:18] 2025-11-23 19:13:10,951 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 11:13:18] 2025-11-23 19:13:10,951 | INFO     | [monitor] control thread has ended
[2025-11-23 11:13:18] 2025-11-23 19:13:15,546 | INFO     | all workflow threads have been joined
[2025-11-23 11:13:18] 2025-11-23 19:13:15,546 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 11:13:18] 2025-11-23 19:13:15,547 | INFO     | traces error code: 0
[2025-11-23 11:13:18] 2025-11-23 19:13:15,547 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 11:13:18] 2025-11-23 19:13:16,798 [wrapper] ==== pilot stdout END ====
[2025-11-23 11:13:18] 2025-11-23 19:13:16,839 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 11:13:18] 2025-11-23 19:13:16,876 [wrapper] pilotpid: 3059926
[2025-11-23 11:13:18] 2025-11-23 19:13:16,898 [wrapper] Pilot exit status: 0
[2025-11-23 11:13:18] 2025-11-23 19:13:17,067 [wrapper] pandaids: 6895356200
[2025-11-23 11:13:18] 2025-11-23 19:13:17,297 [wrapper] cleanup supervisor_pilot 3059932 3059927
[2025-11-23 11:13:18] 2025-11-23 19:13:17,300 [wrapper] Test setup, not cleaning
[2025-11-23 11:13:18] 2025-11-23 19:13:17,346 [wrapper] apfmon messages muted
[2025-11-23 11:13:18] 2025-11-23 19:13:17,370 [wrapper] ==== wrapper stdout END ====
[2025-11-23 11:13:18] 2025-11-23 19:13:17,411 [wrapper] ==== wrapper stderr END ====
[2025-11-23 11:13:18]  *** Error codes and diagnostics ***
[2025-11-23 11:13:18]     "exeErrorCode": 65,
[2025-11-23 11:13:18]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-23 11:13:18]     "pilotErrorCode": 1305,
[2025-11-23 11:13:18]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-23 11:13:18]  *** Listing of results directory ***
[2025-11-23 11:13:18] total 402596
[2025-11-23 11:13:18] -rw-r--r--. 1 boinc boinc    576529 Nov 23 02:16 pilot3.tar.gz
[2025-11-23 11:13:18] -rw-r--r--. 1 boinc boinc      5112 Nov 23 02:28 queuedata.json
[2025-11-23 11:13:18] -rwx------. 1 boinc boinc     36292 Nov 23 02:30 runpilot2-wrapper.sh
[2025-11-23 11:13:18] -rw-r--r--. 1 boinc boinc       100 Nov 23 11:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 11:13:18] -rwxr-xr-x. 1 boinc boinc      7986 Nov 23 11:05 run_atlas
[2025-11-23 11:13:18] -rw-r--r--. 1 boinc boinc       105 Nov 23 11:05 job.xml
[2025-11-23 11:13:18] -rw-r--r--. 1 boinc boinc      6444 Nov 23 11:05 init_data.xml
[2025-11-23 11:13:18] -rw-r--r--. 2 boinc boinc 408013443 Nov 23 11:05 EVNT.47483658._000691.pool.root.1
[2025-11-23 11:13:18] drwxrwx--x. 2 boinc boinc      4096 Nov 23 11:05 shared
[2025-11-23 11:13:18] -rw-r--r--. 2 boinc boinc    590102 Nov 23 11:05 input.tar.gz
[2025-11-23 11:13:18] -rw-r--r--. 2 boinc boinc     15847 Nov 23 11:05 start_atlas.sh
[2025-11-23 11:13:18] -rw-r--r--. 1 boinc boinc         0 Nov 23 11:05 boinc_lockfile
[2025-11-23 11:13:18] -rw-r--r--. 1 boinc boinc      2782 Nov 23 11:05 pandaJob.out
[2025-11-23 11:13:18] -rw-------. 1 boinc boinc    989786 Nov 23 11:06 agis_schedconf.cvmfs.json
[2025-11-23 11:13:18] -rw-------. 1 boinc boinc   1526164 Nov 23 11:06 agis_ddmendpoints.agis.ALL.json
[2025-11-23 11:13:18] drwx------. 5 boinc boinc      4096 Nov 23 11:06 pilot3
[2025-11-23 11:13:18] -rw-r--r--. 1 boinc boinc       524 Nov 23 11:09 boinc_task_state.xml
[2025-11-23 11:13:18] -rw-------. 1 boinc boinc       988 Nov 23 11:10 memory_monitor_summary.json
[2025-11-23 11:13:18] -rw-------. 1 boinc boinc     51317 Nov 23 11:10 log.47556137._006861.job.log.tgz.1
[2025-11-23 11:13:18] -rw-------. 1 boinc boinc        95 Nov 23 11:12 pilot_heartbeat.json
[2025-11-23 11:13:18] -rw-------. 1 boinc boinc     10328 Nov 23 11:12 heartbeat.json
[2025-11-23 11:13:18] -rw-r--r--. 1 boinc boinc      8192 Nov 23 11:13 boinc_mmap_file
[2025-11-23 11:13:18] -rw-------. 1 boinc boinc      4823 Nov 23 11:13 pilotlog.txt
[2025-11-23 11:13:18] -rw-r--r--. 1 boinc boinc        23 Nov 23 11:13 wrapper_checkpoint.txt
[2025-11-23 11:13:18] -rw-------. 1 boinc boinc    113069 Nov 23 11:13 log.47556137._006861.job.log.1
[2025-11-23 11:13:18] -rw-------. 1 boinc boinc       186 Nov 23 11:13 output.list
[2025-11-23 11:13:18] -rw-r--r--. 1 boinc boinc       620 Nov 23 11:13 runtime_log
[2025-11-23 11:13:18] -rw-------. 1 boinc boinc    184320 Nov 23 11:13 result.tar.gz
[2025-11-23 11:13:18] -rw-------. 1 boinc boinc       646 Nov 23 11:13 zcQODm4XMh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmEVIKDm9BNwYm.diag
[2025-11-23 11:13:18] -rw-r--r--. 1 boinc boinc      8634 Nov 23 11:13 runtime_log.err
[2025-11-23 11:13:18] -rw-r--r--. 1 boinc boinc     22584 Nov 23 11:13 stderr.txt
[2025-11-23 11:13:18] No HITS result produced
[2025-11-23 11:13:18]  *** Contents of shared directory: ***
[2025-11-23 11:13:18] total 399232
[2025-11-23 11:13:18] -rw-r--r--. 2 boinc boinc 408013443 Nov 23 11:05 ATLAS.root_0
[2025-11-23 11:13:18] -rw-r--r--. 2 boinc boinc    590102 Nov 23 11:05 input.tar.gz
[2025-11-23 11:13:18] -rw-r--r--. 2 boinc boinc     15847 Nov 23 11:05 start_atlas.sh
[2025-11-23 11:13:18] -rw-------. 1 boinc boinc    184320 Nov 23 11:13 result.tar.gz
11:13:19 (3055973): run_atlas exited; CPU time 55.365487
11:13:19 (3055973): called boinc_finish(0)

</stderr_txt>
]]>

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