Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:51:39 (8475): wrapper (7.7.26015): starting
13:51:39 (8475): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 13:51:39] Arguments: --nthreads 8
[2025-11-23 13:51:39] Threads: 8
[2025-11-23 13:51:39] Checking for CVMFS
[2025-11-23 13:51:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 13:51:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 13:51:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 13:51:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 13:51:39] 2.11.2.0 4697 113728 133760 153217 3 81 15702540 18432001 1885 130560 0 80774568 99.973 4852244 32110 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 13:51:39] CVMFS is ok
[2025-11-23 13:51:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 13:51:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 13:51:39] Further information can be found at the LHC@home message board.
[2025-11-23 13:51:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 13:51:39] Checking for apptainer binary...
[2025-11-23 13:51:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 13:51:39] Running /usr/bin/apptainer --version
[2025-11-23 13:51:39] apptainer version 1.3.2-1.el7
[2025-11-23 13:51:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 13:51:40] c-206-21.aglt2.org
[2025-11-23 13:51:40] apptainer works
[2025-11-23 13:51:40] Set ATHENA_PROC_NUMBER=8
[2025-11-23 13:51:40] Set ATHENA_CORE_NUMBER=8
[2025-11-23 13:51:40] Starting ATLAS job with PandaID=6895339088
[2025-11-23 13:51:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 09:39:55]  *** The last 200 lines of the pilot log: ***
[2025-11-24 09:39:55] 2025-11-24 14:38:55,879 | INFO     | monitor loop #5073: job 0:6895339088 is in state 'finished'
[2025-11-24 09:39:55] 2025-11-24 14:38:55,884 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 09:39:55] 2025-11-24 14:38:57,167 | INFO     | time since job start (71225s) is within the limit (172800.0s)
[2025-11-24 09:39:55] 2025-11-24 14:38:57,802 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 09:39:55] 2025-11-24 14:38:57,806 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2206.125
[2025-11-24 09:39:55] 2025-11-24 14:38:57,808 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895339088/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 09:39:55] 2025-11-24 14:38:57,809 | INFO     | extracted standard info from prmon json
[2025-11-24 09:39:55] 2025-11-24 14:38:57,809 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 09:39:55] 2025-11-24 14:38:57,809 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 09:39:55] 2025-11-24 14:38:57,824 | INFO     | fitting pss+swap vs Time
[2025-11-24 09:39:55] 2025-11-24 14:38:57,825 | INFO     | sum of square deviations: 492823019089.61096
[2025-11-24 09:39:55] 2025-11-24 14:38:57,848 | INFO     | sum of deviations: 2351260445286.9893
[2025-11-24 09:39:55] 2025-11-24 14:38:57,848 | INFO     | mean x: 1763959501.5595543
[2025-11-24 09:39:55] 2025-11-24 14:38:57,848 | INFO     | mean y: 2872860.978577549
[2025-11-24 09:39:55] 2025-11-24 14:38:57,848 | INFO     | intersect: -8412984439.613504
[2025-11-24 09:39:55] 2025-11-24 14:38:57,849 | INFO     | chi2: 5.234241579716752
[2025-11-24 09:39:55] 2025-11-24 14:38:57,851 | INFO     | sum of square deviations: 486515834875.5412
[2025-11-24 09:39:55] 2025-11-24 14:38:57,874 | INFO     | sum of deviations: 2663611210029.28
[2025-11-24 09:39:55] 2025-11-24 14:38:57,874 | INFO     | mean x: 1763959349.0619621
[2025-11-24 09:39:55] 2025-11-24 14:38:57,874 | INFO     | mean y: 2880408.9543889845
[2025-11-24 09:39:55] 2025-11-24 14:38:57,874 | INFO     | intersect: -9654568659.274496
[2025-11-24 09:39:55] 2025-11-24 14:38:57,875 | INFO     | chi2: 3.0518413158420232
[2025-11-24 09:39:55] 2025-11-24 14:38:57,876 | INFO     | current chi2=3.0518413158420232 (change=41.694679747525676 %)
[2025-11-24 09:39:55] 2025-11-24 14:38:57,877 | INFO     | sum of square deviations: 480262698186.453
[2025-11-24 09:39:55] 2025-11-24 14:38:57,900 | INFO     | sum of deviations: 2814317352011.0303
[2025-11-24 09:39:55] 2025-11-24 14:38:57,900 | INFO     | mean x: 1763959196.5643907
[2025-11-24 09:39:55] 2025-11-24 14:38:57,901 | INFO     | mean y: 2884081.845289542
[2025-11-24 09:39:55] 2025-11-24 14:38:57,901 | INFO     | intersect: -10333835788.085745
[2025-11-24 09:39:55] 2025-11-24 14:38:57,902 | INFO     | chi2: 2.4372130549960724
[2025-11-24 09:39:55] 2025-11-24 14:38:57,902 | INFO     | current chi2=2.4372130549960724 (change=20.13958778444451 %)
[2025-11-24 09:39:55] 2025-11-24 14:38:57,902 | INFO     | right removable region: 1156
[2025-11-24 09:39:55] 2025-11-24 14:38:57,903 | INFO     | sum of square deviations: 486515436545.5414
[2025-11-24 09:39:55] 2025-11-24 14:38:57,927 | INFO     | sum of deviations: 2045302184615.8057
[2025-11-24 09:39:55] 2025-11-24 14:38:57,927 | INFO     | mean x: 1763959654.0619621
[2025-11-24 09:39:55] 2025-11-24 14:38:57,927 | INFO     | mean y: 2880250.183304647
[2025-11-24 09:39:55] 2025-11-24 14:38:57,927 | INFO     | intersect: -7412774553.380884
[2025-11-24 09:39:55] 2025-11-24 14:38:57,928 | INFO     | chi2: 3.16875431130477
[2025-11-24 09:39:55] 2025-11-24 14:38:57,928 | INFO     | current chi2=3.16875431130477 (change=39.46106110990304 %)
[2025-11-24 09:39:55] 2025-11-24 14:38:57,929 | INFO     | sum of square deviations: 480262043290.7052
[2025-11-24 09:39:55] 2025-11-24 14:38:57,952 | INFO     | sum of deviations: 1969143066620.1135
[2025-11-24 09:39:55] 2025-11-24 14:38:57,952 | INFO     | mean x: 1763959806.5626621
[2025-11-24 09:39:55] 2025-11-24 14:38:57,953 | INFO     | mean y: 2882107.0674157306
[2025-11-24 09:39:55] 2025-11-24 14:38:57,953 | INFO     | intersect: -7229605388.903405
[2025-11-24 09:39:55] 2025-11-24 14:38:57,954 | INFO     | chi2: 3.1194861949624046
[2025-11-24 09:39:55] 2025-11-24 14:38:57,954 | INFO     | current chi2=3.1194861949624046 (change=1.5548102346274513 %)
[2025-11-24 09:39:55] 2025-11-24 14:38:57,954 | INFO     | left removable region: 20
[2025-11-24 09:39:55] 2025-11-24 14:38:57,955 | INFO     | sum of square deviations: 454583513052.91547
[2025-11-24 09:39:55] 2025-11-24 14:38:57,978 | INFO     | sum of deviations: 2311156746020.5728
[2025-11-24 09:39:55] 2025-11-24 14:38:57,978 | INFO     | mean x: 1763959776.0669014
[2025-11-24 09:39:55] 2025-11-24 14:38:57,978 | INFO     | mean y: 2896952.3477112674
[2025-11-24 09:39:55] 2025-11-24 14:38:57,978 | INFO     | intersect: -8965284732.876324
[2025-11-24 09:39:55] 2025-11-24 14:38:57,979 | INFO     | chi2: 0.24726502672653006
[2025-11-24 09:39:55] 2025-11-24 14:38:57,979 | INFO     | current memory leak: 5.08 B/s (using 1136 data points, chi2=0.25)
[2025-11-24 09:39:55] 2025-11-24 14:38:57,980 | INFO     | could have reported an average CPU frequency of 2623 MHz (42 samples)
[2025-11-24 09:39:55] 2025-11-24 14:38:57,980 | INFO     | ..............................
[2025-11-24 09:39:55] 2025-11-24 14:38:57,980 | INFO     | . Timing measurements:
[2025-11-24 09:39:55] 2025-11-24 14:38:57,981 | INFO     | . get job = 0 s
[2025-11-24 09:39:55] 2025-11-24 14:38:57,981 | INFO     | . initial setup = 2 s
[2025-11-24 09:39:55] 2025-11-24 14:38:57,981 | INFO     | . payload setup = 5 s
[2025-11-24 09:39:55] 2025-11-24 14:38:57,981 | INFO     | . stage-in = 0 s
[2025-11-24 09:39:55] 2025-11-24 14:38:57,981 | INFO     | . payload execution = 71190 s
[2025-11-24 09:39:55] 2025-11-24 14:38:57,981 | INFO     | . stage-out = 3 s
[2025-11-24 09:39:55] 2025-11-24 14:38:57,981 | INFO     | . log creation = 0 s
[2025-11-24 09:39:55] 2025-11-24 14:38:57,981 | INFO     | ..............................
[2025-11-24 09:39:55] 2025-11-24 14:38:58,057 | INFO     | 
[2025-11-24 09:39:55] 2025-11-24 14:38:58,057 | INFO     | job summary report
[2025-11-24 09:39:55] 2025-11-24 14:38:58,057 | INFO     | --------------------------------------------------
[2025-11-24 09:39:55] 2025-11-24 14:38:58,057 | INFO     | PanDA job id: 6895339088
[2025-11-24 09:39:55] 2025-11-24 14:38:58,057 | INFO     | task id: 47556149
[2025-11-24 09:39:55] 2025-11-24 14:38:58,058 | INFO     | errors: (none)
[2025-11-24 09:39:55] 2025-11-24 14:38:58,058 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 09:39:55] 2025-11-24 14:38:58,058 | INFO     | pilot state: finished 
[2025-11-24 09:39:55] 2025-11-24 14:38:58,058 | INFO     | transexitcode: 0
[2025-11-24 09:39:55] 2025-11-24 14:38:58,058 | INFO     | exeerrorcode: 0
[2025-11-24 09:39:55] 2025-11-24 14:38:58,058 | INFO     | exeerrordiag: 
[2025-11-24 09:39:55] 2025-11-24 14:38:58,058 | INFO     | exitcode: 0
[2025-11-24 09:39:55] 2025-11-24 14:38:58,058 | INFO     | exitmsg: OK
[2025-11-24 09:39:55] 2025-11-24 14:38:58,058 | INFO     | cpuconsumptiontime: 548099 s
[2025-11-24 09:39:55] 2025-11-24 14:38:58,058 | INFO     | nevents: 1000
[2025-11-24 09:39:55] 2025-11-24 14:38:58,058 | INFO     | neventsw: 0
[2025-11-24 09:39:55] 2025-11-24 14:38:58,059 | INFO     | pid: 21740
[2025-11-24 09:39:55] 2025-11-24 14:38:58,059 | INFO     | pgrp: 21740
[2025-11-24 09:39:55] 2025-11-24 14:38:58,059 | INFO     | corecount: 8
[2025-11-24 09:39:55] 2025-11-24 14:38:58,059 | INFO     | event service: False
[2025-11-24 09:39:55] 2025-11-24 14:38:58,059 | INFO     | sizes: {0: 2298577, 1: 2298832, 2: 2298832, 5: 2299122, 12: 2299178, 71199: 2356215, 71202: 2366000, 71205: 2366056, 71210: 2366302}
[2025-11-24 09:39:55] 2025-11-24 14:38:58,059 | INFO     | --------------------------------------------------
[2025-11-24 09:39:55] 2025-11-24 14:38:58,059 | INFO     | 
[2025-11-24 09:39:55] 2025-11-24 14:38:58,059 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-24 09:39:55] 2025-11-24 14:38:58,079 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 09:39:55] 2025-11-24 14:38:58,080 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 09:39:55] 2025-11-24 14:38:58,080 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 09:39:55] 2025-11-24 14:38:58,080 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 09:39:55] 2025-11-24 14:38:58,080 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 09:39:55] 2025-11-24 14:38:58,080 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 09:39:55] 2025-11-24 14:38:58,080 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 09:39:55] 2025-11-24 14:38:58,081 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 09:39:55] 2025-11-24 14:38:58,081 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 09:39:55] 2025-11-24 14:38:58,081 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 09:39:55] 2025-11-24 14:38:58,081 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 09:39:55] 2025-11-24 14:38:58,081 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 09:39:55] 2025-11-24 14:38:58,081 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 09:39:55] 2025-11-24 14:38:58,082 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 09:39:55] 2025-11-24 14:38:58,082 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 09:39:55] 2025-11-24 14:38:58,082 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 09:39:55] 2025-11-24 14:38:58,082 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 09:39:55] 2025-11-24 14:38:58,082 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 09:39:55] 2025-11-24 14:38:58,083 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 09:39:55] 2025-11-24 14:38:58,083 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 09:39:55] 2025-11-24 14:38:58,083 | INFO     | job 6895339088 has completed (purged errors)
[2025-11-24 09:39:55] 2025-11-24 14:38:58,083 | INFO     | overall cleanup function is called
[2025-11-24 09:39:55] 2025-11-24 14:38:59,099 | INFO     | --- collectZombieJob: --- 10, [21740]
[2025-11-24 09:39:55] 2025-11-24 14:38:59,100 | INFO     | zombie collector waiting for pid 21740
[2025-11-24 09:39:55] 2025-11-24 14:38:59,100 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 09:39:55] 2025-11-24 14:38:59,100 | INFO     | collected zombie processes
[2025-11-24 09:39:55] 2025-11-24 14:38:59,100 | INFO     | will attempt to kill all subprocesses of pid=21740
[2025-11-24 09:39:55] 2025-11-24 14:38:59,255 | INFO     | process IDs to be killed: [21740] (in reverse order)
[2025-11-24 09:39:55] 2025-11-24 14:38:59,298 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 09:39:55] 2025-11-24 14:38:59,299 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 09:39:55] 2025-11-24 14:38:59,301 | INFO     | did not find any defunct processes belonging to 21740
[2025-11-24 09:39:55] 2025-11-24 14:38:59,304 | INFO     | did not find any defunct processes belonging to 21740
[2025-11-24 09:39:55] 2025-11-24 14:38:59,306 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 09:39:55] 2025-11-24 14:38:59,306 | INFO     | ready for new job
[2025-11-24 09:39:55] 2025-11-24 14:38:59,306 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 09:39:55] 2025-11-24 14:38:59,310 | INFO     | ***************************************
[2025-11-24 09:39:55] 2025-11-24 14:38:59,310 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 09:39:55] 2025-11-24 14:38:59,310 | INFO     | ***************************************
[2025-11-24 09:39:55] 2025-11-24 14:38:59,310 | INFO     | 
[2025-11-24 09:39:55] 2025-11-24 14:38:59,311 | INFO     | architecture information:
[2025-11-24 09:39:55] 2025-11-24 14:38:59,312 | INFO     | executing command: cat /etc/os-release
[2025-11-24 09:39:55] 2025-11-24 14:38:59,323 | INFO     | cat /etc/os-release:
[2025-11-24 09:39:55] NAME="CentOS Linux"
[2025-11-24 09:39:55] VERSION="7 (Core)"
[2025-11-24 09:39:55] ID="centos"
[2025-11-24 09:39:55] ID_LIKE="rhel fedora"
[2025-11-24 09:39:55] VERSION_ID="7"
[2025-11-24 09:39:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 09:39:55] ANSI_COLOR="0;31"
[2025-11-24 09:39:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 09:39:55] HOME_URL="https://www.centos.org/"
[2025-11-24 09:39:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 09:39:55] 
[2025-11-24 09:39:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 09:39:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 09:39:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 09:39:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 09:39:55] 
[2025-11-24 09:39:55] 2025-11-24 14:38:59,324 | INFO     | ***************************************
[2025-11-24 09:39:55] 2025-11-24 14:38:59,827 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-24 09:39:55] 2025-11-24 14:38:59,844 | INFO     | sufficient remaining disk space (24554504192 B)
[2025-11-24 09:39:55] 2025-11-24 14:38:59,844 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 09:39:55] 2025-11-24 14:38:59,845 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 09:39:55] 2025-11-24 14:38:59,845 | INFO     | update_server=False
[2025-11-24 09:39:55] 2025-11-24 14:38:59,845 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 09:39:55] 2025-11-24 14:38:59,845 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 09:39:55] 2025-11-24 14:38:59,845 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 09:39:55] 2025-11-24 14:38:59,845 | INFO     | aborting loop
[2025-11-24 09:39:55] 2025-11-24 14:39:00,549 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 09:39:55] 2025-11-24 14:39:00,604 | INFO     | all data control threads have been joined
[2025-11-24 09:39:55] 2025-11-24 14:39:00,850 | INFO     | [job] retrieve thread has finished
[2025-11-24 09:39:55] 2025-11-24 14:39:00,851 | INFO     | [job] job monitor thread has finished
[2025-11-24 09:39:55] 2025-11-24 14:39:00,852 | INFO     | [job] queue monitor thread has finished
[2025-11-24 09:39:55] 2025-11-24 14:39:00,869 | INFO     | all job control threads have been joined
[2025-11-24 09:39:55] 2025-11-24 14:39:00,924 | INFO     | [data] copytool_in thread has finished
[2025-11-24 09:39:55] 2025-11-24 14:39:01,005 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 09:39:55] 2025-11-24 14:39:01,015 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 09:39:55] 2025-11-24 14:39:01,018 | INFO     | all payload control threads have been joined
[2025-11-24 09:39:55] 2025-11-24 14:39:01,025 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 09:39:55] 2025-11-24 14:39:01,472 | INFO     | [job] validate thread has finished
[2025-11-24 09:39:55] 2025-11-24 14:39:01,552 | INFO     | [payload] failed_post thread has finished
[2025-11-24 09:39:55] 2025-11-24 14:39:01,610 | INFO     | [data] control thread has finished
[2025-11-24 09:39:55] 2025-11-24 14:39:01,835 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 09:39:55] 2025-11-24 14:39:01,874 | INFO     | [job] control thread has finished
[2025-11-24 09:39:55] 2025-11-24 14:39:01,983 | INFO     | [payload] validate_post thread has finished
[2025-11-24 09:39:55] 2025-11-24 14:39:02,024 | INFO     | [payload] control thread has finished
[2025-11-24 09:39:55] 2025-11-24 14:39:02,555 | INFO     | [data] copytool_out thread has finished
[2025-11-24 09:39:55] 2025-11-24 14:39:02,986 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 09:39:55] 2025-11-24 14:39:06,993 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 09:39:55] 2025-11-24 14:39:30,418 | INFO     | PID=12980 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 09:39:55] 2025-11-24 14:39:30,419 | INFO     | .. there are 3 such processes running
[2025-11-24 09:39:55] 2025-11-24 14:39:30,420 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 09:39:55] 2025-11-24 14:39:30,420 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 09:39:55] 2025-11-24 14:39:30,420 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 09:39:55] 2025-11-24 14:39:49,130 | INFO     | [monitor] cgroup control has ended
[2025-11-24 09:39:55] 2025-11-24 14:39:49,817 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139945092736832)>', '<ExcThread(monitor, started 139944521623296)>']
[2025-11-24 09:39:55] 2025-11-24 14:39:50,516 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 09:39:55] 2025-11-24 14:39:50,516 | INFO     | [monitor] control thread has ended
[2025-11-24 09:39:55] 2025-11-24 14:39:54,839 | INFO     | all workflow threads have been joined
[2025-11-24 09:39:55] 2025-11-24 14:39:54,840 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 09:39:55] 2025-11-24 14:39:54,840 | INFO     | traces error code: 0
[2025-11-24 09:39:55] 2025-11-24 14:39:54,841 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 09:39:55] 2025-11-24 14:39:54,950 [wrapper] ==== pilot stdout END ====
[2025-11-24 09:39:55] 2025-11-24 14:39:54,952 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 09:39:55] 2025-11-24 14:39:54,954 [wrapper] pilotpid: 12980
[2025-11-24 09:39:55] 2025-11-24 14:39:54,955 [wrapper] Pilot exit status: 0
[2025-11-24 09:39:55] 2025-11-24 14:39:54,963 [wrapper] pandaids: 6895339088
[2025-11-24 09:39:55] 2025-11-24 14:39:54,993 [wrapper] cleanup supervisor_pilot  9214 12981
[2025-11-24 09:39:55] 2025-11-24 14:39:54,995 [wrapper] Test setup, not cleaning
[2025-11-24 09:39:55] 2025-11-24 14:39:54,998 [wrapper] apfmon messages muted
[2025-11-24 09:39:55] 2025-11-24 14:39:55,000 [wrapper] ==== wrapper stdout END ====
[2025-11-24 09:39:55] 2025-11-24 14:39:55,003 [wrapper] ==== wrapper stderr END ====
[2025-11-24 09:39:55]  *** Error codes and diagnostics ***
[2025-11-24 09:39:55]     "exeErrorCode": 0,
[2025-11-24 09:39:55]     "exeErrorDiag": "",
[2025-11-24 09:39:55]     "pilotErrorCode": 0,
[2025-11-24 09:39:55]     "pilotErrorDiag": "",
[2025-11-24 09:39:55]  *** Listing of results directory ***
[2025-11-24 09:39:55] total 1355596
[2025-11-24 09:39:55] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 04:55 pilot3.tar.gz
[2025-11-24 09:39:55] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 05:07 queuedata.json
[2025-11-24 09:39:55] -rwx------ 1 boincer umatlas     36292 Nov 22 05:08 runpilot2-wrapper.sh
[2025-11-24 09:39:55] -rw-r--r-- 1 boincer umatlas       100 Nov 23 13:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 09:39:55] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 13:51 run_atlas
[2025-11-24 09:39:55] -rw-r--r-- 1 boincer umatlas       105 Nov 23 13:51 job.xml
[2025-11-24 09:39:55] -rw-r--r-- 2 boincer umatlas 411750002 Nov 23 13:51 EVNT.47483658._001083.pool.root.1
[2025-11-24 09:39:55] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 13:51 start_atlas.sh
[2025-11-24 09:39:55] drwxrwx--x 2 boincer umatlas      4096 Nov 23 13:51 shared
[2025-11-24 09:39:55] -rw-r--r-- 2 boincer umatlas    590100 Nov 23 13:51 input.tar.gz
[2025-11-24 09:39:55] -rw-r--r-- 1 boincer umatlas         0 Nov 23 13:51 boinc_lockfile
[2025-11-24 09:39:55] -rw-r--r-- 1 boincer umatlas      2784 Nov 23 13:51 pandaJob.out
[2025-11-24 09:39:55] -rw------- 1 boincer umatlas        57 Nov 23 13:51 setup.sh.local
[2025-11-24 09:39:55] -rw------- 1 boincer umatlas    989786 Nov 23 13:51 agis_schedconf.cvmfs.json
[2025-11-24 09:39:55] drwx------ 5 boincer umatlas      4096 Nov 23 13:51 pilot3
[2025-11-24 09:39:55] -rw-r--r-- 1 boincer umatlas       533 Nov 24 09:24 boinc_task_state.xml
[2025-11-24 09:39:55] -rw-r--r-- 1 boincer umatlas      5954 Nov 24 09:28 init_data.xml
[2025-11-24 09:39:55] -rw------- 1 boincer umatlas 948171910 Nov 24 09:38 HITS.47556149._000699.pool.root.1
[2025-11-24 09:39:55] -rw------- 1 boincer umatlas      1068 Nov 24 09:38 memory_monitor_summary.json
[2025-11-24 09:39:55] -rw------- 1 boincer umatlas   1516227 Nov 24 09:38 agis_ddmendpoints.agis.ALL.json
[2025-11-24 09:39:55] -rw------- 1 boincer umatlas   2321734 Nov 24 09:38 log.47556149._000699.job.log.tgz.1
[2025-11-24 09:39:55] -rw------- 1 boincer umatlas      8662 Nov 24 09:38 heartbeat.json
[2025-11-24 09:39:55] -rw------- 1 boincer umatlas        95 Nov 24 09:39 pilot_heartbeat.json
[2025-11-24 09:39:55] -rw-r--r-- 1 boincer umatlas        29 Nov 24 09:39 wrapper_checkpoint.txt
[2025-11-24 09:39:55] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 09:39 boinc_mmap_file
[2025-11-24 09:39:55] -rw------- 1 boincer umatlas      4821 Nov 24 09:39 pilotlog.txt
[2025-11-24 09:39:55] -rw------- 1 boincer umatlas   9825716 Nov 24 09:39 log.47556149._000699.job.log.1
[2025-11-24 09:39:55] -rw------- 1 boincer umatlas       353 Nov 24 09:39 output.list
[2025-11-24 09:39:55] -rw-r--r-- 1 boincer umatlas       620 Nov 24 09:39 runtime_log
[2025-11-24 09:39:55] -rw------- 1 boincer umatlas  12165120 Nov 24 09:39 result.tar.gz
[2025-11-24 09:39:55] -rw-r--r-- 1 boincer umatlas      9343 Nov 24 09:39 runtime_log.err
[2025-11-24 09:39:55] -rw------- 1 boincer umatlas       668 Nov 24 09:39 dGANDmYizg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm66JKDm4Wtz2n.diag
[2025-11-24 09:39:55] -rw-r--r-- 1 boincer umatlas     21311 Nov 24 09:39 stderr.txt
[2025-11-24 09:39:55] HITS file was successfully produced:
[2025-11-24 09:39:55] -rw------- 1 boincer umatlas 948171910 Nov 24 09:38 shared/HITS.pool.root.1
[2025-11-24 09:39:55]  *** Contents of shared directory: ***
[2025-11-24 09:39:55] total 1340536
[2025-11-24 09:39:55] -rw-r--r-- 2 boincer umatlas 411750002 Nov 23 13:51 ATLAS.root_0
[2025-11-24 09:39:55] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 13:51 start_atlas.sh
[2025-11-24 09:39:55] -rw-r--r-- 2 boincer umatlas    590100 Nov 23 13:51 input.tar.gz
[2025-11-24 09:39:55] -rw------- 1 boincer umatlas 948171910 Nov 24 09:38 HITS.pool.root.1
[2025-11-24 09:39:55] -rw------- 1 boincer umatlas  12165120 Nov 24 09:39 result.tar.gz
09:39:56 (8475): run_atlas exited; CPU time 546880.460486
09:39:56 (8475): called boinc_finish(0)

</stderr_txt>
]]>

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