Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:06:15 (19287): wrapper (7.7.26015): starting
15:06:15 (19287): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 15:06:15] Arguments: --nthreads 12
[2025-11-23 15:06:15] Threads: 12
[2025-11-23 15:06:15] Checking for CVMFS
[2025-11-23 15:06:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 15:06:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 15:06:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 15:06:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 15:06:15] 2.11.2.0 3081 283773 97116 153219 0 82 14140379 20275201 1 130560 1 127898575 99.965 16721229 14269 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 15:06:15] CVMFS is ok
[2025-11-23 15:06:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 15:06:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 15:06:15] Further information can be found at the LHC@home message board.
[2025-11-23 15:06:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 15:06:15] Checking for apptainer binary...
[2025-11-23 15:06:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 15:06:15] Running /usr/bin/apptainer --version
[2025-11-23 15:06:15] apptainer version 1.3.2-1.el7
[2025-11-23 15:06:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 15:06:17] c-205-29.aglt2.org
[2025-11-23 15:06:17] apptainer works
[2025-11-23 15:06:17] Set ATHENA_PROC_NUMBER=12
[2025-11-23 15:06:17] Set ATHENA_CORE_NUMBER=12
[2025-11-23 15:06:17] Starting ATLAS job with PandaID=6895332023
[2025-11-23 15:06:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 22:13:20]  *** The last 200 lines of the pilot log: ***
[2025-11-23 22:13:20] 2025-11-24 03:12:25,771 | INFO     | time since job start (25553s) is within the limit (172800.0s)
[2025-11-23 22:13:20] 2025-11-24 03:12:26,392 | INFO     | monitor loop #1916: job 0:6895332023 is in state 'finished'
[2025-11-23 22:13:20] 2025-11-24 03:12:26,392 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 22:13:20] 2025-11-24 03:12:27,288 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 22:13:20] 2025-11-24 03:12:27,292 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1729.0833333333333
[2025-11-23 22:13:20] 2025-11-24 03:12:27,295 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895332023/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 22:13:20] 2025-11-24 03:12:27,295 | INFO     | extracted standard info from prmon json
[2025-11-23 22:13:20] 2025-11-24 03:12:27,296 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 22:13:20] 2025-11-24 03:12:27,296 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 22:13:20] 2025-11-24 03:12:27,302 | INFO     | fitting pss+swap vs Time
[2025-11-23 22:13:20] 2025-11-24 03:12:27,303 | INFO     | sum of square deviations: 22809530357.799583
[2025-11-23 22:13:20] 2025-11-24 03:12:27,307 | INFO     | sum of deviations: 376917175194.2982
[2025-11-23 22:13:20] 2025-11-24 03:12:27,307 | INFO     | mean x: 1763941170.2195704
[2025-11-23 22:13:20] 2025-11-24 03:12:27,307 | INFO     | mean y: 3423119.7684964202
[2025-11-23 22:13:20] 2025-11-24 03:12:27,307 | INFO     | intersect: -29144907102.67909
[2025-11-23 22:13:20] 2025-11-24 03:12:27,307 | INFO     | chi2: 6.047014238827521
[2025-11-23 22:13:20] 2025-11-24 03:12:27,308 | INFO     | sum of square deviations: 22002687475.05543
[2025-11-23 22:13:20] 2025-11-24 03:12:27,312 | INFO     | sum of deviations: 547635690123.05536
[2025-11-23 22:13:20] 2025-11-24 03:12:27,312 | INFO     | mean x: 1763941017.7222223
[2025-11-23 22:13:20] 2025-11-24 03:12:27,312 | INFO     | mean y: 3455359.157004831
[2025-11-23 22:13:20] 2025-11-24 03:12:27,312 | INFO     | intersect: -43900138584.620544
[2025-11-23 22:13:20] 2025-11-24 03:12:27,312 | INFO     | chi2: 2.6678669148513148
[2025-11-23 22:13:20] 2025-11-24 03:12:27,313 | INFO     | current chi2=2.6678669148513148 (change=55.88125297074548 %)
[2025-11-23 22:13:20] 2025-11-24 03:12:27,313 | INFO     | sum of square deviations: 21215100767.30567
[2025-11-23 22:13:20] 2025-11-24 03:12:27,317 | INFO     | sum of deviations: 575905913514.0438
[2025-11-23 22:13:20] 2025-11-24 03:12:27,317 | INFO     | mean x: 1763940865.2249389
[2025-11-23 22:13:20] 2025-11-24 03:12:27,317 | INFO     | mean y: 3460787.760391198
[2025-11-23 22:13:20] 2025-11-24 03:12:27,317 | INFO     | intersect: -47880543465.363716
[2025-11-23 22:13:20] 2025-11-24 03:12:27,317 | INFO     | chi2: 2.3601059325916984
[2025-11-23 22:13:20] 2025-11-24 03:12:27,318 | INFO     | current chi2=2.3601059325916984 (change=11.535844631019327 %)
[2025-11-23 22:13:20] 2025-11-24 03:12:27,318 | INFO     | right removable region: 408
[2025-11-23 22:13:20] 2025-11-24 03:12:27,318 | INFO     | sum of square deviations: 22002631355.055424
[2025-11-23 22:13:20] 2025-11-24 03:12:27,322 | INFO     | sum of deviations: 248240262403.6665
[2025-11-23 22:13:20] 2025-11-24 03:12:27,322 | INFO     | mean x: 1763941322.7222223
[2025-11-23 22:13:20] 2025-11-24 03:12:27,322 | INFO     | mean y: 3447351.84057971
[2025-11-23 22:13:20] 2025-11-24 03:12:27,322 | INFO     | intersect: -19897865802.534725
[2025-11-23 22:13:20] 2025-11-24 03:12:27,323 | INFO     | chi2: 3.905745335280964
[2025-11-23 22:13:20] 2025-11-24 03:12:27,323 | INFO     | current chi2=3.905745335280964 (change=35.41034995085006 %)
[2025-11-23 22:13:20] 2025-11-24 03:12:27,323 | INFO     | sum of square deviations: 21214988527.30567
[2025-11-23 22:13:20] 2025-11-24 03:12:27,327 | INFO     | sum of deviations: 211883047818.14664
[2025-11-23 22:13:20] 2025-11-24 03:12:27,327 | INFO     | mean x: 1763941475.2249389
[2025-11-23 22:13:20] 2025-11-24 03:12:27,327 | INFO     | mean y: 3454390.8679706603
[2025-11-23 22:13:20] 2025-11-24 03:12:27,327 | INFO     | intersect: -17613773893.86325
[2025-11-23 22:13:20] 2025-11-24 03:12:27,328 | INFO     | chi2: 3.836710128275575
[2025-11-23 22:13:20] 2025-11-24 03:12:27,328 | INFO     | current chi2=3.836710128275575 (change=1.7675296538611285 %)
[2025-11-23 22:13:20] 2025-11-24 03:12:27,328 | INFO     | left removable region: 20
[2025-11-23 22:13:20] 2025-11-24 03:12:27,329 | INFO     | sum of square deviations: 18112089386.123814
[2025-11-23 22:13:20] 2025-11-24 03:12:27,332 | INFO     | sum of deviations: 352047608037.3817
[2025-11-23 22:13:20] 2025-11-24 03:12:27,332 | INFO     | mean x: 1763941444.7319589
[2025-11-23 22:13:20] 2025-11-24 03:12:27,332 | INFO     | mean y: 3505179.0902061854
[2025-11-23 22:13:20] 2025-11-24 03:12:27,332 | INFO     | intersect: -34282509708.383163
[2025-11-23 22:13:20] 2025-11-24 03:12:27,333 | INFO     | chi2: 0.059351556430367464
[2025-11-23 22:13:20] 2025-11-24 03:12:27,333 | INFO     | current memory leak: 19.44 B/s (using 388 data points, chi2=0.06)
[2025-11-23 22:13:20] 2025-11-24 03:12:27,333 | INFO     | could have reported an average CPU frequency of 2360 MHz (18 samples)
[2025-11-23 22:13:20] 2025-11-24 03:12:27,333 | INFO     | ..............................
[2025-11-23 22:13:20] 2025-11-24 03:12:27,333 | INFO     | . Timing measurements:
[2025-11-23 22:13:20] 2025-11-24 03:12:27,333 | INFO     | . get job = 0 s
[2025-11-23 22:13:20] 2025-11-24 03:12:27,334 | INFO     | . initial setup = 2 s
[2025-11-23 22:13:20] 2025-11-24 03:12:27,334 | INFO     | . payload setup = 7 s
[2025-11-23 22:13:20] 2025-11-24 03:12:27,334 | INFO     | . stage-in = 0 s
[2025-11-23 22:13:20] 2025-11-24 03:12:27,334 | INFO     | . payload execution = 25518 s
[2025-11-23 22:13:20] 2025-11-24 03:12:27,334 | INFO     | . stage-out = 3 s
[2025-11-23 22:13:20] 2025-11-24 03:12:27,334 | INFO     | . log creation = 0 s
[2025-11-23 22:13:20] 2025-11-24 03:12:27,334 | INFO     | ..............................
[2025-11-23 22:13:20] 2025-11-24 03:12:27,511 | INFO     | 
[2025-11-23 22:13:20] 2025-11-24 03:12:27,519 | INFO     | job summary report
[2025-11-23 22:13:20] 2025-11-24 03:12:27,519 | INFO     | --------------------------------------------------
[2025-11-23 22:13:20] 2025-11-24 03:12:27,520 | INFO     | PanDA job id: 6895332023
[2025-11-23 22:13:20] 2025-11-24 03:12:27,520 | INFO     | task id: 47556149
[2025-11-23 22:13:20] 2025-11-24 03:12:27,520 | INFO     | errors: (none)
[2025-11-23 22:13:20] 2025-11-24 03:12:27,520 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 22:13:20] 2025-11-24 03:12:27,520 | INFO     | pilot state: finished 
[2025-11-23 22:13:20] 2025-11-24 03:12:27,520 | INFO     | transexitcode: 0
[2025-11-23 22:13:20] 2025-11-24 03:12:27,520 | INFO     | exeerrorcode: 0
[2025-11-23 22:13:20] 2025-11-24 03:12:27,520 | INFO     | exeerrordiag: 
[2025-11-23 22:13:20] 2025-11-24 03:12:27,520 | INFO     | exitcode: 0
[2025-11-23 22:13:20] 2025-11-24 03:12:27,520 | INFO     | exitmsg: OK
[2025-11-23 22:13:20] 2025-11-24 03:12:27,521 | INFO     | cpuconsumptiontime: 293486 s
[2025-11-23 22:13:20] 2025-11-24 03:12:27,521 | INFO     | nevents: 1000
[2025-11-23 22:13:20] 2025-11-24 03:12:27,521 | INFO     | neventsw: 0
[2025-11-23 22:13:20] 2025-11-24 03:12:27,521 | INFO     | pid: 30215
[2025-11-23 22:13:20] 2025-11-24 03:12:27,521 | INFO     | pgrp: 30215
[2025-11-23 22:13:20] 2025-11-24 03:12:27,521 | INFO     | corecount: 12
[2025-11-23 22:13:20] 2025-11-24 03:12:27,521 | INFO     | event service: False
[2025-11-23 22:13:20] 2025-11-24 03:12:27,521 | INFO     | sizes: {0: 2298799, 5: 2299061, 11: 2299117, 25529: 2336266, 25533: 2345316, 25539: 2345506}
[2025-11-23 22:13:20] 2025-11-24 03:12:27,521 | INFO     | --------------------------------------------------
[2025-11-23 22:13:20] 2025-11-24 03:12:27,521 | INFO     | 
[2025-11-23 22:13:20] 2025-11-24 03:12:27,522 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 22:13:20] 2025-11-24 03:12:27,544 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 22:13:20] 2025-11-24 03:12:27,545 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 22:13:20] 2025-11-24 03:12:27,545 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 22:13:20] 2025-11-24 03:12:27,545 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 22:13:20] 2025-11-24 03:12:27,545 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 22:13:20] 2025-11-24 03:12:27,545 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 22:13:20] 2025-11-24 03:12:27,546 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 22:13:20] 2025-11-24 03:12:27,546 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 22:13:20] 2025-11-24 03:12:27,546 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 22:13:20] 2025-11-24 03:12:27,546 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 22:13:20] 2025-11-24 03:12:27,546 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 22:13:20] 2025-11-24 03:12:27,546 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 22:13:20] 2025-11-24 03:12:27,547 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 22:13:20] 2025-11-24 03:12:27,547 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 22:13:20] 2025-11-24 03:12:27,547 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 22:13:20] 2025-11-24 03:12:27,547 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 22:13:20] 2025-11-24 03:12:27,547 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 22:13:20] 2025-11-24 03:12:27,547 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 22:13:20] 2025-11-24 03:12:27,548 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 22:13:20] 2025-11-24 03:12:27,548 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 22:13:20] 2025-11-24 03:12:27,548 | INFO     | job 6895332023 has completed (purged errors)
[2025-11-23 22:13:20] 2025-11-24 03:12:27,548 | INFO     | overall cleanup function is called
[2025-11-23 22:13:20] 2025-11-24 03:12:28,565 | INFO     | --- collectZombieJob: --- 10, [30215]
[2025-11-23 22:13:20] 2025-11-24 03:12:28,565 | INFO     | zombie collector waiting for pid 30215
[2025-11-23 22:13:20] 2025-11-24 03:12:28,566 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 22:13:20] 2025-11-24 03:12:28,566 | INFO     | collected zombie processes
[2025-11-23 22:13:20] 2025-11-24 03:12:28,566 | INFO     | will attempt to kill all subprocesses of pid=30215
[2025-11-23 22:13:20] 2025-11-24 03:12:28,665 | INFO     | process IDs to be killed: [30215] (in reverse order)
[2025-11-23 22:13:20] 2025-11-24 03:12:28,715 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 22:13:20] 2025-11-24 03:12:28,715 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 22:13:20] 2025-11-24 03:12:28,719 | INFO     | did not find any defunct processes belonging to 30215
[2025-11-23 22:13:20] 2025-11-24 03:12:28,722 | INFO     | did not find any defunct processes belonging to 30215
[2025-11-23 22:13:20] 2025-11-24 03:12:28,725 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 22:13:20] 2025-11-24 03:12:28,725 | INFO     | ready for new job
[2025-11-23 22:13:20] 2025-11-24 03:12:28,725 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 22:13:20] 2025-11-24 03:12:28,728 | INFO     | ***************************************
[2025-11-23 22:13:20] 2025-11-24 03:12:28,728 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 22:13:20] 2025-11-24 03:12:28,728 | INFO     | ***************************************
[2025-11-23 22:13:20] 2025-11-24 03:12:28,728 | INFO     | 
[2025-11-23 22:13:20] 2025-11-24 03:12:28,729 | INFO     | architecture information:
[2025-11-23 22:13:20] 2025-11-24 03:12:28,729 | INFO     | executing command: cat /etc/os-release
[2025-11-23 22:13:20] 2025-11-24 03:12:28,743 | INFO     | cat /etc/os-release:
[2025-11-23 22:13:20] NAME="CentOS Linux"
[2025-11-23 22:13:20] VERSION="7 (Core)"
[2025-11-23 22:13:20] ID="centos"
[2025-11-23 22:13:20] ID_LIKE="rhel fedora"
[2025-11-23 22:13:20] VERSION_ID="7"
[2025-11-23 22:13:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 22:13:20] ANSI_COLOR="0;31"
[2025-11-23 22:13:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 22:13:20] HOME_URL="https://www.centos.org/"
[2025-11-23 22:13:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 22:13:20] 
[2025-11-23 22:13:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 22:13:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 22:13:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 22:13:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 22:13:20] 
[2025-11-23 22:13:20] 2025-11-24 03:12:28,743 | INFO     | ***************************************
[2025-11-23 22:13:20] 2025-11-24 03:12:29,246 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 22:13:20] 2025-11-24 03:12:29,262 | INFO     | sufficient remaining disk space (28250734592 B)
[2025-11-23 22:13:20] 2025-11-24 03:12:29,262 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 22:13:20] 2025-11-24 03:12:29,262 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 22:13:20] 2025-11-24 03:12:29,262 | INFO     | update_server=False
[2025-11-23 22:13:20] 2025-11-24 03:12:29,262 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 22:13:20] 2025-11-24 03:12:29,263 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 22:13:20] 2025-11-24 03:12:29,263 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 22:13:20] 2025-11-24 03:12:29,401 | INFO     | all data control threads have been joined
[2025-11-23 22:13:20] 2025-11-24 03:12:29,534 | INFO     | all payload control threads have been joined
[2025-11-23 22:13:20] 2025-11-24 03:12:29,837 | INFO     | all job control threads have been joined
[2025-11-23 22:13:20] 2025-11-24 03:12:29,906 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 22:13:20] 2025-11-24 03:12:29,906 | INFO     | aborting loop
[2025-11-23 22:13:20] 2025-11-24 03:12:30,268 | INFO     | [job] retrieve thread has finished
[2025-11-23 22:13:20] 2025-11-24 03:12:30,269 | INFO     | [job] queue monitor thread has finished
[2025-11-23 22:13:20] 2025-11-24 03:12:30,406 | INFO     | [data] control thread has finished
[2025-11-23 22:13:20] 2025-11-24 03:12:30,425 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 22:13:20] 2025-11-24 03:12:30,539 | INFO     | [payload] control thread has finished
[2025-11-23 22:13:20] 2025-11-24 03:12:30,581 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 22:13:20] 2025-11-24 03:12:30,623 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 22:13:20] 2025-11-24 03:12:30,843 | INFO     | [job] control thread has finished
[2025-11-23 22:13:20] 2025-11-24 03:12:30,900 | INFO     | [payload] failed_post thread has finished
[2025-11-23 22:13:20] 2025-11-24 03:12:30,911 | INFO     | [job] job monitor thread has finished
[2025-11-23 22:13:20] 2025-11-24 03:12:31,004 | INFO     | [job] validate thread has finished
[2025-11-23 22:13:20] 2025-11-24 03:12:31,269 | INFO     | [data] copytool_out thread has finished
[2025-11-23 22:13:20] 2025-11-24 03:12:31,597 | INFO     | [payload] validate_post thread has finished
[2025-11-23 22:13:20] 2025-11-24 03:12:31,623 | INFO     | [data] copytool_in thread has finished
[2025-11-23 22:13:20] 2025-11-24 03:12:32,030 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 22:13:20] 2025-11-24 03:12:36,036 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 22:13:20] 2025-11-24 03:12:39,805 | INFO     | job.realtimelogging is not enabled
[2025-11-23 22:13:20] 2025-11-24 03:12:40,810 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 22:13:20] 2025-11-24 03:12:58,964 | INFO     | PID=23850 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 22:13:20] 2025-11-24 03:12:58,965 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 22:13:20] 2025-11-24 03:12:58,965 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 22:13:20] 2025-11-24 03:12:58,965 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 22:13:20] 2025-11-24 03:13:13,395 | INFO     | [monitor] cgroup control has ended
[2025-11-23 22:13:20] 2025-11-24 03:13:15,056 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140243000944448)>', '<ExcThread(monitor, started 140242283652864)>']
[2025-11-23 22:13:20] 2025-11-24 03:13:16,048 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 22:13:20] 2025-11-24 03:13:16,048 | INFO     | [monitor] control thread has ended
[2025-11-23 22:13:20] 2025-11-24 03:13:20,081 | INFO     | all workflow threads have been joined
[2025-11-23 22:13:20] 2025-11-24 03:13:20,087 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 22:13:20] 2025-11-24 03:13:20,088 | INFO     | traces error code: 0
[2025-11-23 22:13:20] 2025-11-24 03:13:20,088 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 22:13:20] 2025-11-24 03:13:20,175 [wrapper] ==== pilot stdout END ====
[2025-11-23 22:13:20] 2025-11-24 03:13:20,179 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 22:13:20] 2025-11-24 03:13:20,183 [wrapper] pilotpid: 23850
[2025-11-23 22:13:20] 2025-11-24 03:13:20,186 [wrapper] Pilot exit status: 0
[2025-11-23 22:13:20] 2025-11-24 03:13:20,201 [wrapper] pandaids: 6895332023
[2025-11-23 22:13:20] 2025-11-24 03:13:20,245 [wrapper] cleanup supervisor_pilot 30385 23851
[2025-11-23 22:13:20] 2025-11-24 03:13:20,249 [wrapper] Test setup, not cleaning
[2025-11-23 22:13:20] 2025-11-24 03:13:20,253 [wrapper] apfmon messages muted
[2025-11-23 22:13:20] 2025-11-24 03:13:20,257 [wrapper] ==== wrapper stdout END ====
[2025-11-23 22:13:20] 2025-11-24 03:13:20,261 [wrapper] ==== wrapper stderr END ====
[2025-11-23 22:13:20]  *** Error codes and diagnostics ***
[2025-11-23 22:13:20]     "exeErrorCode": 0,
[2025-11-23 22:13:20]     "exeErrorDiag": "",
[2025-11-23 22:13:20]     "pilotErrorCode": 0,
[2025-11-23 22:13:20]     "pilotErrorDiag": "",
[2025-11-23 22:13:20]  *** Listing of results directory ***
[2025-11-23 22:13:20] total 1312044
[2025-11-23 22:13:20] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 18:51 pilot3.tar.gz
[2025-11-23 22:13:20] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 19:09 queuedata.json
[2025-11-23 22:13:20] -rwx------ 1 boincer umatlas     36292 Nov 21 19:13 runpilot2-wrapper.sh
[2025-11-23 22:13:20] -rw-r--r-- 1 boincer umatlas       100 Nov 23 15:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 22:13:20] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 15:06 run_atlas
[2025-11-23 22:13:20] -rw-r--r-- 1 boincer umatlas       105 Nov 23 15:06 job.xml
[2025-11-23 22:13:20] -rw-r--r-- 2 boincer umatlas 409151239 Nov 23 15:06 EVNT.47483658._001051.pool.root.1
[2025-11-23 22:13:20] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 15:06 start_atlas.sh
[2025-11-23 22:13:20] drwxrwx--x 2 boincer umatlas      4096 Nov 23 15:06 shared
[2025-11-23 22:13:20] -rw-r--r-- 2 boincer umatlas    590104 Nov 23 15:06 input.tar.gz
[2025-11-23 22:13:20] -rw-r--r-- 1 boincer umatlas         0 Nov 23 15:06 boinc_lockfile
[2025-11-23 22:13:20] -rw-r--r-- 1 boincer umatlas      2782 Nov 23 15:06 pandaJob.out
[2025-11-23 22:13:20] -rw------- 1 boincer umatlas        57 Nov 23 15:06 setup.sh.local
[2025-11-23 22:13:20] -rw------- 1 boincer umatlas    989786 Nov 23 15:06 agis_schedconf.cvmfs.json
[2025-11-23 22:13:20] drwx------ 5 boincer umatlas      4096 Nov 23 15:06 pilot3
[2025-11-23 22:13:20] -rw-r--r-- 1 boincer umatlas       532 Nov 23 22:03 boinc_task_state.xml
[2025-11-23 22:13:20] -rw------- 1 boincer umatlas 918881534 Nov 23 22:11 HITS.47556149._000371.pool.root.1
[2025-11-23 22:13:20] -rw------- 1 boincer umatlas      1063 Nov 23 22:12 memory_monitor_summary.json
[2025-11-23 22:13:20] -rw------- 1 boincer umatlas   1526164 Nov 23 22:12 agis_ddmendpoints.agis.ALL.json
[2025-11-23 22:13:20] -rw------- 1 boincer umatlas   2187882 Nov 23 22:12 log.47556149._000371.job.log.tgz.1
[2025-11-23 22:13:20] -rw------- 1 boincer umatlas      8662 Nov 23 22:12 heartbeat.json
[2025-11-23 22:13:20] -rw-r--r-- 1 boincer umatlas      5955 Nov 23 22:12 init_data.xml
[2025-11-23 22:13:20] -rw------- 1 boincer umatlas        95 Nov 23 22:12 pilot_heartbeat.json
[2025-11-23 22:13:20] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 22:13 boinc_mmap_file
[2025-11-23 22:13:20] -rw-r--r-- 1 boincer umatlas        29 Nov 23 22:13 wrapper_checkpoint.txt
[2025-11-23 22:13:20] -rw------- 1 boincer umatlas      4818 Nov 23 22:13 pilotlog.txt
[2025-11-23 22:13:20] -rw------- 1 boincer umatlas   3594029 Nov 23 22:13 log.47556149._000371.job.log.1
[2025-11-23 22:13:20] -rw------- 1 boincer umatlas       353 Nov 23 22:13 output.list
[2025-11-23 22:13:20] -rw-r--r-- 1 boincer umatlas       620 Nov 23 22:13 runtime_log
[2025-11-23 22:13:20] -rw------- 1 boincer umatlas   5806080 Nov 23 22:13 result.tar.gz
[2025-11-23 22:13:20] -rw-r--r-- 1 boincer umatlas      9345 Nov 23 22:13 runtime_log.err
[2025-11-23 22:13:20] -rw------- 1 boincer umatlas       670 Nov 23 22:13 L9QMDmWQqg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmloJKDm4TKHHn.diag
[2025-11-23 22:13:20] -rw-r--r-- 1 boincer umatlas     21284 Nov 23 22:13 stderr.txt
[2025-11-23 22:13:20] HITS file was successfully produced:
[2025-11-23 22:13:20] -rw------- 1 boincer umatlas 918881534 Nov 23 22:11 shared/HITS.pool.root.1
[2025-11-23 22:13:20]  *** Contents of shared directory: ***
[2025-11-23 22:13:20] total 1303188
[2025-11-23 22:13:20] -rw-r--r-- 2 boincer umatlas 409151239 Nov 23 15:06 ATLAS.root_0
[2025-11-23 22:13:20] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 15:06 start_atlas.sh
[2025-11-23 22:13:20] -rw-r--r-- 2 boincer umatlas    590104 Nov 23 15:06 input.tar.gz
[2025-11-23 22:13:20] -rw------- 1 boincer umatlas 918881534 Nov 23 22:11 HITS.pool.root.1
[2025-11-23 22:13:20] -rw------- 1 boincer umatlas   5806080 Nov 23 22:13 result.tar.gz
22:13:22 (19287): run_atlas exited; CPU time 286909.706606
22:13:22 (19287): called boinc_finish(0)

</stderr_txt>
]]>

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