Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-24 04:10:31 (5696): vboxwrapper version 26210
2025-11-24 04:10:31 (5696): BOINC client version: 8.2.4
2025-11-24 04:10:32 (5696): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-11-24 04:10:32 (5696): Successfully copied 'init_data.xml' to the shared directory.
2025-11-24 04:10:32 (5696): Create VM. (boinc_a273c1fc4fd42bcd, slot#7)
2025-11-24 04:10:33 (5696): Setting Memory Size for VM. (4800MB)
2025-11-24 04:10:33 (5696): Setting CPU Count for VM. (8)
2025-11-24 04:10:33 (5696): Setting Chipset Options for VM.
2025-11-24 04:10:34 (5696): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-24 04:10:34 (5696): Setting Boot Options for VM.
2025-11-24 04:10:34 (5696): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-24 04:10:35 (5696): Enabling VM Network Access.
2025-11-24 04:10:35 (5696): Disabling USB Support for VM.
2025-11-24 04:10:35 (5696): Disabling COM Port Support for VM.
2025-11-24 04:10:35 (5696): Disabling LPT Port Support for VM.
2025-11-24 04:10:36 (5696): Disabling Audio Support for VM.
2025-11-24 04:10:36 (5696): Disabling Clipboard Support for VM.
2025-11-24 04:10:36 (5696): Disabling Drag and Drop Support for VM.
2025-11-24 04:10:36 (5696): Adding storage controller(s) to VM.
2025-11-24 04:10:37 (5696): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-24 04:10:39 (5696): Adding VirtualBox Guest Additions to VM.
2025-11-24 04:10:39 (5696): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-24 04:10:39 (5696): forwarding host port 53050 to guest port 80
2025-11-24 04:10:40 (5696): Enabling remote desktop for VM.
2025-11-24 04:10:40 (5696): Required extension pack not installed, remote desktop not enabled.
2025-11-24 04:10:40 (5696): Enabling shared directory for VM.
2025-11-24 04:10:40 (5696): Starting VM using VBoxManage interface. (boinc_a273c1fc4fd42bcd, slot#7)
2025-11-24 04:10:49 (5696): Successfully started VM. (PID = '13852')
2025-11-24 04:10:49 (5696): Reporting VM Process ID to BOINC.
2025-11-24 04:10:49 (5696): Guest Log: BIOS: VirtualBox 7.0.6
2025-11-24 04:10:49 (5696): Guest Log: CPUID EDX: 0x178bfbff
2025-11-24 04:10:49 (5696): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-24 04:10:49 (5696): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-24 04:10:49 (5696): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-24 04:10:49 (5696): Detected: Web Application Enabled (http://localhost:53050)
2025-11-24 04:10:49 (5696): Preference change detected
2025-11-24 04:10:49 (5696): Setting CPU throttle for VM. (100%)
2025-11-24 04:10:49 (5696): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-24 04:10:51 (5696): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-24 04:10:51 (5696): Guest Log: BIOS: Booting from Hard Disk...
2025-11-24 04:10:54 (5696): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-24 04:10:54 (5696): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-24 04:10:54 (5696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-24 04:10:54 (5696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-24 04:10:54 (5696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-24 04:10:54 (5696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-24 04:10:54 (5696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-24 04:10:54 (5696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-24 04:10:54 (5696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-24 04:10:54 (5696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-24 04:10:54 (5696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-24 04:10:54 (5696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-24 04:10:54 (5696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-24 04:10:54 (5696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-24 04:10:54 (5696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-24 04:10:54 (5696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-24 04:10:54 (5696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-24 04:10:54 (5696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-24 04:10:54 (5696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-24 04:10:54 (5696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-24 04:10:54 (5696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-24 04:10:54 (5696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-24 04:10:54 (5696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-24 04:10:54 (5696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-24 04:10:54 (5696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-24 04:10:54 (5696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-24 04:10:54 (5696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-24 04:10:54 (5696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-24 04:10:54 (5696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-24 04:10:54 (5696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-24 04:10:54 (5696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-24 04:10:54 (5696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-24 04:10:59 (5696): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-24 04:10:59 (5696): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-24 04:11:06 (5696): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-24 04:11:06 (5696): Guest Log: 00:00:00.000166 main     Log opened 2025-11-24T04:11:04.584386000Z
2025-11-24 04:11:06 (5696): Guest Log: 00:00:00.000314 main     OS Product: Linux
2025-11-24 04:11:06 (5696): Guest Log: 00:00:00.000364 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-24 04:11:06 (5696): Guest Log: 00:00:00.000456 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-24 04:11:06 (5696): Guest Log: 00:00:00.000511 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-24 04:11:06 (5696): Guest Log: 00:00:00.000512 main     Process ID: 1388
2025-11-24 04:11:06 (5696): Guest Log: 00:00:00.000512 main     Package type: LINUX_64BITS_GENERIC
2025-11-24 04:11:06 (5696): Guest Log: 00:00:00.001627 main     5.2.32 r132073 started. Verbose level = 0
2025-11-24 04:11:06 (5696): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-24 04:11:06 (5696): Guest Log: [INFO] Mounting shared directory
2025-11-24 04:11:06 (5696): Guest Log: [INFO] Checking for init_data.xml
2025-11-24 04:11:12 (5696): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-24 04:11:12 (5696): Guest Log: [INFO] Detected branch: prod
2025-11-24 04:11:13 (5696): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-24 04:11:13 (5696): Guest Log: Copying input files
2025-11-24 04:11:15 (5696): Guest Log: Copied input files into RunAtlas.
2025-11-24 04:11:15 (5696): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-24 04:11:15 (5696): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-24 04:11:15 (5696): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-24 04:11:15 (5696): Guest Log: Further information can be found at the LHC@home message board.
2025-11-24 04:11:16 (5696): Guest Log: 00:00:10.017666 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 010 898 978 000ns (GuestNow=1 763 975 475 486 898 000 ns GuestLast=1 763 957 464 587 920 000 ns fSetTimeLastLoop=true )
2025-11-24 04:11:25 (5696): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-24 04:11:25 (5696): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-24 04:11:25 (5696): Guest Log: 2.6.3.0 1670 0 30168 153239 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-11-24 04:11:26 (5696): Guest Log: copied the webapp to /var/www
2025-11-24 04:11:26 (5696): Guest Log: ATHENA_PROC_NUMBER=8
2025-11-24 04:11:26 (5696): Guest Log: ATHENA_CORE_NUMBER=8
2025-11-24 04:11:26 (5696): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-24 04:11:26 (5696): Guest Log:  *** Starting ATLAS job. (PandaID=6895355970 taskID=47556137) ***
2025-11-24 05:50:54 (5696): Status Report: Elapsed Time: '6000.000000'
2025-11-24 05:50:54 (5696): Status Report: CPU Time: '40632.000000'
2025-11-24 06:11:17 (5696): VM state change detected. (old = 'running', new = 'paused')
2025-11-25 06:31:10 (5696): VM state change detected. (old = 'paused', new = 'running')
2025-11-25 06:31:20 (5696): Guest Log: 02:00:21.650711 timesync vgsvcTimeSyncWorker: Radical host time change: 87 602 489 000 000ns (HostNow=1 764 070 279 582 000 000 ns HostLast=1 763 982 677 093 000 000 ns)
2025-11-25 06:31:30 (5696): Guest Log: 02:00:31.651495 timesync vgsvcTimeSyncWorker: Radical guest time change: 87 602 463 384 000ns (GuestNow=1 764 070 289 582 937 000 ns GuestLast=1 763 982 687 119 553 000 ns fSetTimeLastLoop=true )
2025-11-25 07:50:52 (5696): Status Report: Elapsed Time: '12000.000000'
2025-11-25 07:50:52 (5696): Status Report: CPU Time: '87139.437500'
2025-11-25 09:30:57 (5696): Status Report: Elapsed Time: '18000.000000'
2025-11-25 09:30:57 (5696): Status Report: CPU Time: '133701.703125'
2025-11-25 11:11:02 (5696): Status Report: Elapsed Time: '24000.000000'
2025-11-25 11:11:02 (5696): Status Report: CPU Time: '180295.875000'
2025-11-25 12:51:07 (5696): Status Report: Elapsed Time: '30000.000000'
2025-11-25 12:51:07 (5696): Status Report: CPU Time: '226812.890625'
2025-11-25 14:31:12 (5696): Status Report: Elapsed Time: '36000.000000'
2025-11-25 14:31:12 (5696): Status Report: CPU Time: '273409.890625'
2025-11-25 16:11:17 (5696): Status Report: Elapsed Time: '42000.000000'
2025-11-25 16:11:17 (5696): Status Report: CPU Time: '319965.078125'
2025-11-25 17:51:22 (5696): Status Report: Elapsed Time: '48000.000000'
2025-11-25 17:51:22 (5696): Status Report: CPU Time: '366491.781250'
2025-11-25 19:15:22 (5696): Guest Log:  *** Job finished ***
2025-11-25 19:15:22 (5696): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-25 19:15:22 (5696): Guest Log: 2025-11-26 00:14:50,379 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-25 19:15:22 (5696): Guest Log: 2025-11-26 00:14:50,379 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-25 19:15:22 (5696): Guest Log: 2025-11-26 00:15:10,115 | INFO     | [monitor] cgroup control has ended
2025-11-25 19:15:22 (5696): Guest Log: 2025-11-26 00:15:11,599 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140341290440512)>', '<ExcThread(monitor, started 140340833003264)>']
2025-11-25 19:15:22 (5696): Guest Log: 2025-11-26 00:15:11,605 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-25 19:15:22 (5696): Guest Log: 2025-11-26 00:15:11,606 | INFO     | [monitor] control thread has ended
2025-11-25 19:15:22 (5696): Guest Log: 2025-11-26 00:15:16,610 | INFO     | all workflow threads have been joined
2025-11-25 19:15:22 (5696): Guest Log: 2025-11-26 00:15:16,611 | INFO     | end of generic workflow (traces error code: 0)
2025-11-25 19:15:22 (5696): Guest Log: 2025-11-26 00:15:16,612 | INFO     | traces error code: 0
2025-11-25 19:15:22 (5696): Guest Log: 2025-11-26 00:15:16,613 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-25 19:15:22 (5696): Guest Log: 2025-11-26 00:15:16,716 [wrapper] ==== pilot stdout END ====
2025-11-25 19:15:22 (5696): Guest Log: 2025-11-26 00:15:16,721 [wrapper] ==== wrapper stdout RESUME ====
2025-11-25 19:15:22 (5696): Guest Log: 2025-11-26 00:15:16,725 [wrapper] pilotpid: 6106
2025-11-25 19:15:22 (5696): Guest Log: 2025-11-26 00:15:16,729 [wrapper] Pilot exit status: 0
2025-11-25 19:15:22 (5696): Guest Log: 2025-11-26 00:15:16,746 [wrapper] pandaids: 6895355970
2025-11-25 19:15:22 (5696): Guest Log: 2025-11-26 00:15:16,785 [wrapper] cleanup supervisor_pilot 10024 6107
2025-11-25 19:15:22 (5696): Guest Log: 2025-11-26 00:15:16,792 [wrapper] Test setup, not cleaning
2025-11-25 19:15:22 (5696): Guest Log: 2025-11-26 00:15:16,797 [wrapper] apfmon messages muted
2025-11-25 19:15:22 (5696): Guest Log: 2025-11-26 00:15:16,802 [wrapper] ==== wrapper stdout END ====
2025-11-25 19:15:22 (5696): Guest Log: 2025-11-26 00:15:16,807 [wrapper] ==== wrapper stderr END ====
2025-11-25 19:15:22 (5696): Guest Log:  *** Error codes and diagnostics ***
2025-11-25 19:15:22 (5696): Guest Log:     "exeErrorCode": 0,
2025-11-25 19:15:22 (5696): Guest Log:     "exeErrorDiag": "",
2025-11-25 19:15:22 (5696): Guest Log:     "pilotErrorCode": 0,
2025-11-25 19:15:22 (5696): Guest Log:     "pilotErrorDiag": "",
2025-11-25 19:15:22 (5696): Guest Log:  *** Listing of results directory ***
2025-11-25 19:15:22 (5696): Guest Log: total 915208
2025-11-25 19:15:22 (5696): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 23 09:19 pilot3.tar.gz
2025-11-25 19:15:22 (5696): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 23 09:37 runpilot2-wrapper.sh
2025-11-25 19:15:22 (5696): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 23 09:37 queuedata.json
2025-11-25 19:15:22 (5696): Guest Log: -rwxr-xr-x. 1 atlas atlas     11294 Nov 24 09:11 init_data.xml
2025-11-25 19:15:22 (5696): Guest Log: -rwxr-xr-x. 1 atlas atlas    590095 Nov 24 09:11 input.tar.gz
2025-11-25 19:15:22 (5696): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 24 09:11 start_atlas.sh
2025-11-25 19:15:22 (5696): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 24 09:11 EVNT.47483658._000681.pool.root.1 -> /data/./ATLAS.root_0
2025-11-25 19:15:22 (5696): Guest Log: -rw-r--r--. 1 atlas atlas      2785 Nov 24 09:11 pandaJob.out
2025-11-25 19:15:22 (5696): Guest Log: -rw-------. 1 atlas atlas    989794 Nov 24 09:13 agis_schedconf.cvmfs.json
2025-11-25 19:15:22 (5696): Guest Log: drwx------. 5 atlas atlas      4096 Nov 24 09:13 pilot3
2025-11-25 19:15:22 (5696): Guest Log: -rw-------. 1 atlas atlas 915508211 Nov 26 00:13 HITS.47556137._006765.pool.root.1
2025-11-25 19:15:22 (5696): Guest Log: -rw-------. 1 atlas atlas      1041 Nov 26 00:13 memory_monitor_summary.json
2025-11-25 19:15:22 (5696): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 26 00:13 agis_ddmendpoints.agis.ALL.json
2025-11-25 19:15:22 (5696): Guest Log: -rw-------. 1 atlas atlas   2056411 Nov 26 00:13 log.47556137._006765.job.log.tgz.1
2025-11-25 19:15:22 (5696): Guest Log: -rw-------. 1 atlas atlas      8663 Nov 26 00:14 heartbeat.json
2025-11-25 19:15:22 (5696): Guest Log: -rw-------. 1 atlas atlas        98 Nov 26 00:14 pilot_heartbeat.json
2025-11-25 19:15:22 (5696): Guest Log: -rw-------. 1 atlas atlas      4805 Nov 26 00:15 pilotlog.txt
2025-11-25 19:15:22 (5696): Guest Log: -rw-------. 1 atlas atlas   6851698 Nov 26 00:15 log.47556137._006765.job.log.1
2025-11-25 19:15:22 (5696): Guest Log: -rw-------. 1 atlas atlas       353 Nov 26 00:15 output.list
2025-11-25 19:15:22 (5696): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 26 00:15 runtime_log
2025-11-25 19:15:22 (5696): Guest Log: -rw-------. 1 atlas atlas   8929280 Nov 26 00:15 result.tar.gz
2025-11-25 19:15:22 (5696): Guest Log: -rw-r--r--. 1 atlas atlas      8769 Nov 26 00:15 runtime_log.err
2025-11-25 19:15:22 (5696): Guest Log: -rw-------. 1 atlas atlas       672 Nov 26 00:15 aSfKDmshLh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJmKKDmT9KzWn.diag
2025-11-25 19:15:22 (5696): Guest Log: Looking for outputfile HITS.47556137._006765.pool.root.1
2025-11-25 19:15:22 (5696): Guest Log: HITS file was successfully produced
2025-11-25 19:15:22 (5696): Guest Log: -rw-------. 1 atlas atlas 915508211 Nov 26 00:13 /home/atlas/RunAtlas/HITS.47556137._006765.pool.root.1
2025-11-25 19:15:27 (5696): Guest Log: Successfully finished the ATLAS job!
2025-11-25 19:15:27 (5696): Guest Log: Copying the results back to the shared directory!
2025-11-25 19:15:28 (5696): Guest Log:  *** Contents of shared directory: ***
2025-11-25 19:15:28 (5696): Guest Log: total 1302392
2025-11-25 19:15:28 (5696): Guest Log: -rwxrwxrwx. 1 root root 408587356 Nov 24 09:10 ATLAS.root_0
2025-11-25 19:15:28 (5696): Guest Log: -rwxrwxrwx. 1 root root 915508211 Nov 26 00:15 HITS.pool.root.1
2025-11-25 19:15:28 (5696): Guest Log: -rwxrwxrwx. 1 root root     11294 Nov 24 09:10 init_data.xml
2025-11-25 19:15:28 (5696): Guest Log: -rwxrwxrwx. 1 root root    590095 Nov 23 18:36 input.tar.gz
2025-11-25 19:15:28 (5696): Guest Log: -rwxrwxrwx. 1 root root   8929280 Nov 26 00:15 result.tar.gz
2025-11-25 19:15:28 (5696): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 23 18:36 start_atlas.sh
2025-11-25 19:15:28 (5696): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-25 19:15:28 (5696): VM Completion File Detected.
2025-11-25 19:15:28 (5696): Powering off VM.
2025-11-25 19:15:29 (5696): Successfully stopped VM.
2025-11-25 19:15:29 (5696): Deregistering VM. (boinc_a273c1fc4fd42bcd, slot#7)
2025-11-25 19:15:29 (5696): Removing network bandwidth throttle group from VM.
2025-11-25 19:15:29 (5696): Removing VM from VirtualBox.
2025-11-25 19:15:34 (5696): called boinc_finish(0)

</stderr_txt>
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