Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
12:33:42 (1200309): wrapper (7.7.26015): starting
12:33:42 (1200309): wrapper: running run_atlas (--nthreads 10)
[2025-11-24 12:33:42] Arguments: --nthreads 10
[2025-11-24 12:33:42] Threads: 10
[2025-11-24 12:33:42] Checking for CVMFS
[2025-11-24 12:33:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 12:33:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 12:33:42] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 12:33:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 12:33:43] 2.13.3.0 7351 8938 52428 153258 0 89 2814103 4096000 10403 130560 0 27642709 99.979 613929 751 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-24 12:33:43] CVMFS is ok
[2025-11-24 12:33:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 12:33:43] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-24 12:33:43] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-24 12:33:43] Further information can be found at the LHC@home message board.
[2025-11-24 12:33:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 12:33:43] Checking for apptainer binary...
[2025-11-24 12:33:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 12:33:43] Running /usr/bin/apptainer --version
[2025-11-24 12:33:43] apptainer version 1.4.2
[2025-11-24 12:33:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 12:33:44] 3950x-linux
[2025-11-24 12:33:44] apptainer works
[2025-11-24 12:33:44] Set ATHENA_PROC_NUMBER=10
[2025-11-24 12:33:44] Set ATHENA_CORE_NUMBER=10
[2025-11-24 12:33:44] Starting ATLAS job with PandaID=6895324211
[2025-11-24 12:33:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc224/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 10:56:38]  *** The last 200 lines of the pilot log: ***
[2025-11-25 10:56:38] 2025-11-25 18:55:43,227 | INFO     | monitor loop #5227: job 0:6895324211 is in state 'finished'
[2025-11-25 10:56:38] 2025-11-25 18:55:43,227 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 10:56:38] 2025-11-25 18:55:44,965 | INFO     | time since job start (80487s) is within the limit (172800.0s)
[2025-11-25 10:56:38] 2025-11-25 18:55:45,734 | INFO     | monitor loop #5228: job 0:6895324211 is in state 'finished'
[2025-11-25 10:56:38] 2025-11-25 18:55:45,734 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 10:56:38] 2025-11-25 18:55:47,034 | INFO     | PID=1204975 has CPU usage=10.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-25 10:56:38] 2025-11-25 18:55:47,034 | INFO     | .. there are 12 such processes running
[2025-11-25 10:56:38] 2025-11-25 18:55:48,036 | INFO     | time since job start (80491s) is within the limit (172800.0s)
[2025-11-25 10:56:38] 2025-11-25 18:55:48,244 | INFO     | monitor loop #5229: job 0:6895324211 is in state 'finished'
[2025-11-25 10:56:38] 2025-11-25 18:55:48,244 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 10:56:38] 2025-11-25 18:55:50,043 | INFO     | time since job start (80493s) is within the limit (172800.0s)
[2025-11-25 10:56:38] 2025-11-25 18:55:50,747 | INFO     | monitor loop #5230: job 0:6895324211 is in state 'finished'
[2025-11-25 10:56:38] 2025-11-25 18:55:50,747 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 10:56:38] 2025-11-25 18:55:52,048 | INFO     | time since job start (80495s) is within the limit (172800.0s)
[2025-11-25 10:56:38] 2025-11-25 18:55:53,250 | INFO     | monitor loop #5231: job 0:6895324211 is in state 'finished'
[2025-11-25 10:56:38] 2025-11-25 18:55:53,250 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 10:56:38] 2025-11-25 18:55:54,057 | INFO     | time since job start (80497s) is within the limit (172800.0s)
[2025-11-25 10:56:38] 2025-11-25 18:55:54,278 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 10:56:38] 2025-11-25 18:55:54,292 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3249.791000000001
[2025-11-25 10:56:38] 2025-11-25 18:55:54,322 | INFO     | using path: /var/lib/multiboinc/boinc224/slots/3/PanDA_Pilot-6895324211/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 10:56:38] 2025-11-25 18:55:54,323 | INFO     | extracted standard info from prmon json
[2025-11-25 10:56:38] 2025-11-25 18:55:54,323 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 10:56:38] 2025-11-25 18:55:54,323 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 10:56:38] 2025-11-25 18:55:54,400 | INFO     | fitting pss+swap vs Time
[2025-11-25 10:56:38] 2025-11-25 18:55:54,410 | INFO     | sum of square deviations: 709939954067.1196
[2025-11-25 10:56:38] 2025-11-25 18:55:54,567 | INFO     | sum of deviations: 2843456246335.674
[2025-11-25 10:56:38] 2025-11-25 18:55:54,576 | INFO     | mean x: 1764056704.7996964
[2025-11-25 10:56:38] 2025-11-25 18:55:54,577 | INFO     | mean y: 3128868.195751138
[2025-11-25 10:56:38] 2025-11-25 18:55:54,577 | INFO     | intersect: -7062282829.536076
[2025-11-25 10:56:38] 2025-11-25 18:55:54,578 | INFO     | chi2: 16.49127558403782
[2025-11-25 10:56:38] 2025-11-25 18:55:54,579 | INFO     | sum of square deviations: 701892096979.9744
[2025-11-25 10:56:38] 2025-11-25 18:55:54,735 | INFO     | sum of deviations: 3338252641333.86
[2025-11-25 10:56:38] 2025-11-25 18:55:54,735 | INFO     | mean x: 1764056552.312262
[2025-11-25 10:56:38] 2025-11-25 18:55:54,735 | INFO     | mean y: 3138242.1881188117
[2025-11-25 10:56:38] 2025-11-25 18:55:54,735 | INFO     | intersect: -8386850006.086354
[2025-11-25 10:56:38] 2025-11-25 18:55:54,745 | INFO     | chi2: 13.10397976047764
[2025-11-25 10:56:38] 2025-11-25 18:55:54,745 | INFO     | current chi2=13.10397976047764 (change=20.539926134269436 %)
[2025-11-25 10:56:38] 2025-11-25 18:55:54,745 | INFO     | right removable region: 1312
[2025-11-25 10:56:38] 2025-11-25 18:55:54,747 | INFO     | sum of square deviations: 701889444089.9739
[2025-11-25 10:56:38] 2025-11-25 18:55:54,892 | INFO     | sum of deviations: 2313500774610.382
[2025-11-25 10:56:38] 2025-11-25 18:55:54,893 | INFO     | mean x: 1764056857.312262
[2025-11-25 10:56:38] 2025-11-25 18:55:54,893 | INFO     | mean y: 3138905.8088347297
[2025-11-25 10:56:38] 2025-11-25 18:55:54,893 | INFO     | intersect: -5811376386.040346
[2025-11-25 10:56:38] 2025-11-25 18:55:54,894 | INFO     | chi2: 13.006305987437342
[2025-11-25 10:56:38] 2025-11-25 18:55:54,894 | INFO     | current chi2=13.006305987437342 (change=21.132201562222615 %)
[2025-11-25 10:56:38] 2025-11-25 18:55:54,894 | INFO     | left removable region: 10
[2025-11-25 10:56:38] 2025-11-25 18:55:54,904 | INFO     | sum of square deviations: 684396147770.7716
[2025-11-25 10:56:38] 2025-11-25 18:55:55,048 | INFO     | sum of deviations: 2524266593395.1772
[2025-11-25 10:56:38] 2025-11-25 18:55:55,049 | INFO     | mean x: 1764056826.8402457
[2025-11-25 10:56:38] 2025-11-25 18:55:55,049 | INFO     | mean y: 3157478.553763441
[2025-11-25 10:56:38] 2025-11-25 18:55:55,049 | INFO     | intersect: -6503234661.945226
[2025-11-25 10:56:38] 2025-11-25 18:55:55,050 | INFO     | chi2: 7.301200626139069
[2025-11-25 10:56:38] 2025-11-25 18:55:55,050 | INFO     | current memory leak: 3.69 B/s (using 1302 data points, chi2=7.30)
[2025-11-25 10:56:38] 2025-11-25 18:55:55,051 | INFO     | could have reported an average CPU frequency of 3249 MHz (48 samples)
[2025-11-25 10:56:38] 2025-11-25 18:55:55,051 | INFO     | ..............................
[2025-11-25 10:56:38] 2025-11-25 18:55:55,051 | INFO     | . Timing measurements:
[2025-11-25 10:56:38] 2025-11-25 18:55:55,063 | INFO     | . get job = 0 s
[2025-11-25 10:56:38] 2025-11-25 18:55:55,063 | INFO     | . initial setup = 4 s
[2025-11-25 10:56:38] 2025-11-25 18:55:55,063 | INFO     | . payload setup = 21 s
[2025-11-25 10:56:38] 2025-11-25 18:55:55,064 | INFO     | . stage-in = 0 s
[2025-11-25 10:56:38] 2025-11-25 18:55:55,064 | INFO     | . payload execution = 80403 s
[2025-11-25 10:56:38] 2025-11-25 18:55:55,064 | INFO     | . stage-out = 7 s
[2025-11-25 10:56:38] 2025-11-25 18:55:55,064 | INFO     | . log creation = 2 s
[2025-11-25 10:56:38] 2025-11-25 18:55:55,064 | INFO     | ..............................
[2025-11-25 10:56:38] 2025-11-25 18:55:55,837 | INFO     | 
[2025-11-25 10:56:38] 2025-11-25 18:55:55,837 | INFO     | job summary report
[2025-11-25 10:56:38] 2025-11-25 18:55:55,838 | INFO     | --------------------------------------------------
[2025-11-25 10:56:38] 2025-11-25 18:55:55,838 | INFO     | PanDA job id: 6895324211
[2025-11-25 10:56:38] 2025-11-25 18:55:55,838 | INFO     | task id: 47556137
[2025-11-25 10:56:38] 2025-11-25 18:55:55,838 | INFO     | errors: (none)
[2025-11-25 10:56:38] 2025-11-25 18:55:55,838 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 10:56:38] 2025-11-25 18:55:55,838 | INFO     | pilot state: finished 
[2025-11-25 10:56:38] 2025-11-25 18:55:55,838 | INFO     | transexitcode: 0
[2025-11-25 10:56:38] 2025-11-25 18:55:55,838 | INFO     | exeerrorcode: 0
[2025-11-25 10:56:38] 2025-11-25 18:55:55,838 | INFO     | exeerrordiag: 
[2025-11-25 10:56:38] 2025-11-25 18:55:55,838 | INFO     | exitcode: 0
[2025-11-25 10:56:38] 2025-11-25 18:55:55,838 | INFO     | exitmsg: OK
[2025-11-25 10:56:38] 2025-11-25 18:55:55,838 | INFO     | cpuconsumptiontime: 221630 s
[2025-11-25 10:56:38] 2025-11-25 18:55:55,838 | INFO     | nevents: 1000
[2025-11-25 10:56:38] 2025-11-25 18:55:55,838 | INFO     | neventsw: 0
[2025-11-25 10:56:38] 2025-11-25 18:55:55,839 | INFO     | pid: 1213870
[2025-11-25 10:56:38] 2025-11-25 18:55:55,839 | INFO     | pgrp: 1213870
[2025-11-25 10:56:38] 2025-11-25 18:55:55,839 | INFO     | corecount: 10
[2025-11-25 10:56:38] 2025-11-25 18:55:55,839 | INFO     | event service: False
[2025-11-25 10:56:38] 2025-11-25 18:55:55,839 | INFO     | sizes: {0: 2284093, 1: 2284177, 2: 2284348, 13: 2284376, 17: 2284694, 23: 2284722, 80428: 2349291, 80429: 2349290, 80437: 2358373, 80439: 2358429, 80459: 2358675}
[2025-11-25 10:56:38] 2025-11-25 18:55:55,839 | INFO     | --------------------------------------------------
[2025-11-25 10:56:38] 2025-11-25 18:55:55,839 | INFO     | 
[2025-11-25 10:56:38] 2025-11-25 18:55:55,839 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc224/slots/3
[2025-11-25 10:56:38] 2025-11-25 18:55:55,923 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 10:56:38] 2025-11-25 18:55:55,923 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 10:56:38] 2025-11-25 18:55:55,923 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 10:56:38] 2025-11-25 18:55:55,924 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 10:56:38] 2025-11-25 18:55:55,924 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 10:56:38] 2025-11-25 18:55:55,924 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 10:56:38] 2025-11-25 18:55:55,924 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 10:56:38] 2025-11-25 18:55:55,924 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 10:56:38] 2025-11-25 18:55:55,924 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 10:56:38] 2025-11-25 18:55:55,924 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 10:56:38] 2025-11-25 18:55:55,924 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 10:56:38] 2025-11-25 18:55:55,924 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 10:56:38] 2025-11-25 18:55:55,924 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 10:56:38] 2025-11-25 18:55:55,924 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 10:56:38] 2025-11-25 18:55:55,924 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 10:56:38] 2025-11-25 18:55:55,924 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 10:56:38] 2025-11-25 18:55:55,924 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 10:56:38] 2025-11-25 18:55:55,924 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 10:56:38] 2025-11-25 18:55:55,925 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 10:56:38] 2025-11-25 18:55:55,925 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 10:56:38] 2025-11-25 18:55:55,925 | INFO     | job 6895324211 has completed (purged errors)
[2025-11-25 10:56:38] 2025-11-25 18:55:55,925 | INFO     | overall cleanup function is called
[2025-11-25 10:56:38] 2025-11-25 18:55:56,982 | INFO     | --- collectZombieJob: --- 10, [1213870]
[2025-11-25 10:56:38] 2025-11-25 18:55:56,982 | INFO     | zombie collector waiting for pid 1213870
[2025-11-25 10:56:38] 2025-11-25 18:55:56,983 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 10:56:38] 2025-11-25 18:55:56,983 | INFO     | collected zombie processes
[2025-11-25 10:56:38] 2025-11-25 18:55:56,983 | INFO     | will attempt to kill all subprocesses of pid=1213870
[2025-11-25 10:56:38] 2025-11-25 18:55:57,868 | INFO     | process IDs to be killed: [1213870] (in reverse order)
[2025-11-25 10:56:38] 2025-11-25 18:55:58,233 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 10:56:38] 2025-11-25 18:55:58,233 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 10:56:38] 2025-11-25 18:55:58,258 | INFO     | did not find any defunct processes belonging to 1213870
[2025-11-25 10:56:38] 2025-11-25 18:55:58,285 | INFO     | did not find any defunct processes belonging to 1213870
[2025-11-25 10:56:38] 2025-11-25 18:55:58,287 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 10:56:38] 2025-11-25 18:55:58,287 | INFO     | ready for new job
[2025-11-25 10:56:38] 2025-11-25 18:55:58,287 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 10:56:38] 2025-11-25 18:55:58,305 | INFO     | ***************************************
[2025-11-25 10:56:38] 2025-11-25 18:55:58,305 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 10:56:38] 2025-11-25 18:55:58,305 | INFO     | ***************************************
[2025-11-25 10:56:38] 2025-11-25 18:55:58,305 | INFO     | 
[2025-11-25 10:56:38] 2025-11-25 18:55:58,316 | INFO     | architecture information:
[2025-11-25 10:56:38] 2025-11-25 18:55:58,321 | INFO     | executing command: cat /etc/os-release
[2025-11-25 10:56:38] 2025-11-25 18:55:58,368 | INFO     | cat /etc/os-release:
[2025-11-25 10:56:38] NAME="CentOS Linux"
[2025-11-25 10:56:38] VERSION="7 (Core)"
[2025-11-25 10:56:38] ID="centos"
[2025-11-25 10:56:38] ID_LIKE="rhel fedora"
[2025-11-25 10:56:38] VERSION_ID="7"
[2025-11-25 10:56:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 10:56:38] ANSI_COLOR="0;31"
[2025-11-25 10:56:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 10:56:38] HOME_URL="https://www.centos.org/"
[2025-11-25 10:56:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 10:56:38] 
[2025-11-25 10:56:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 10:56:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 10:56:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 10:56:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 10:56:38] 
[2025-11-25 10:56:38] 2025-11-25 18:55:58,368 | INFO     | ***************************************
[2025-11-25 10:56:38] 2025-11-25 18:55:58,872 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc224/slots/3
[2025-11-25 10:56:38] 2025-11-25 18:55:58,947 | INFO     | sufficient remaining disk space (63937970176 B)
[2025-11-25 10:56:38] 2025-11-25 18:55:58,947 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 10:56:38] 2025-11-25 18:55:58,947 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 10:56:38] 2025-11-25 18:55:58,947 | INFO     | update_server=False
[2025-11-25 10:56:38] 2025-11-25 18:55:58,947 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 10:56:38] 2025-11-25 18:55:58,948 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 10:56:38] 2025-11-25 18:55:58,997 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 10:56:38] 2025-11-25 18:55:59,287 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 10:56:38] 2025-11-25 18:55:59,288 | INFO     | aborting loop
[2025-11-25 10:56:38] 2025-11-25 18:55:59,371 | INFO     | all data control threads have been joined
[2025-11-25 10:56:38] 2025-11-25 18:55:59,697 | INFO     | all payload control threads have been joined
[2025-11-25 10:56:38] 2025-11-25 18:55:59,955 | INFO     | [job] retrieve thread has finished
[2025-11-25 10:56:38] 2025-11-25 18:56:00,099 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 10:56:38] 2025-11-25 18:56:00,112 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 10:56:38] 2025-11-25 18:56:00,229 | INFO     | all job control threads have been joined
[2025-11-25 10:56:38] 2025-11-25 18:56:00,292 | INFO     | [job] job monitor thread has finished
[2025-11-25 10:56:38] 2025-11-25 18:56:00,376 | INFO     | [data] control thread has finished
[2025-11-25 10:56:38] 2025-11-25 18:56:00,394 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 10:56:38] 2025-11-25 18:56:00,522 | INFO     | [payload] failed_post thread has finished
[2025-11-25 10:56:38] 2025-11-25 18:56:00,580 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 10:56:38] 2025-11-25 18:56:00,702 | INFO     | [payload] control thread has finished
[2025-11-25 10:56:38] 2025-11-25 18:56:00,952 | INFO     | [data] copytool_out thread has finished
[2025-11-25 10:56:38] 2025-11-25 18:56:01,234 | INFO     | [job] control thread has finished
[2025-11-25 10:56:38] 2025-11-25 18:56:01,292 | INFO     | [job] validate thread has finished
[2025-11-25 10:56:38] 2025-11-25 18:56:01,293 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 10:56:38] 2025-11-25 18:56:01,293 | INFO     | [data] copytool_in thread has finished
[2025-11-25 10:56:38] 2025-11-25 18:56:01,297 | INFO     | [payload] validate_post thread has finished
[2025-11-25 10:56:38] 2025-11-25 18:56:01,399 | INFO     | [job] queue monitor thread has finished
[2025-11-25 10:56:38] 2025-11-25 18:56:03,002 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 10:56:38] 2025-11-25 18:56:28,250 | INFO     | PID=1204975 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 10:56:38] 2025-11-25 18:56:28,251 | INFO     | .. there are 12 such processes running
[2025-11-25 10:56:38] 2025-11-25 18:56:28,261 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 10:56:38] 2025-11-25 18:56:28,261 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 10:56:38] 2025-11-25 18:56:28,261 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 10:56:38] 2025-11-25 18:56:31,193 | INFO     | [monitor] cgroup control has ended
[2025-11-25 10:56:38] 2025-11-25 18:56:32,677 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137417566742336)>', '<ExcThread(monitor, started 137416908191488)>']
[2025-11-25 10:56:38] 2025-11-25 18:56:33,288 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 10:56:38] 2025-11-25 18:56:33,288 | INFO     | [monitor] control thread has ended
[2025-11-25 10:56:38] 2025-11-25 18:56:37,702 | INFO     | all workflow threads have been joined
[2025-11-25 10:56:38] 2025-11-25 18:56:37,702 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 10:56:38] 2025-11-25 18:56:37,703 | INFO     | traces error code: 0
[2025-11-25 10:56:38] 2025-11-25 18:56:37,703 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 10:56:38] 2025-11-25 18:56:38,101 [wrapper] ==== pilot stdout END ====
[2025-11-25 10:56:38] 2025-11-25 18:56:38,121 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 10:56:38] 2025-11-25 18:56:38,134 [wrapper] pilotpid: 1204975
[2025-11-25 10:56:38] 2025-11-25 18:56:38,146 [wrapper] Pilot exit status: 0
[2025-11-25 10:56:38] 2025-11-25 18:56:38,183 [wrapper] pandaids: 6895324211
[2025-11-25 10:56:38] 2025-11-25 18:56:38,380 [wrapper] cleanup supervisor_pilot 2650778 1204976
[2025-11-25 10:56:38] 2025-11-25 18:56:38,402 [wrapper] Test setup, not cleaning
[2025-11-25 10:56:38] 2025-11-25 18:56:38,409 [wrapper] apfmon messages muted
[2025-11-25 10:56:38] 2025-11-25 18:56:38,428 [wrapper] ==== wrapper stdout END ====
[2025-11-25 10:56:38] 2025-11-25 18:56:38,441 [wrapper] ==== wrapper stderr END ====
[2025-11-25 10:56:38]  *** Error codes and diagnostics ***
[2025-11-25 10:56:38]     "exeErrorCode": 0,
[2025-11-25 10:56:38]     "exeErrorDiag": "",
[2025-11-25 10:56:38]     "pilotErrorCode": 0,
[2025-11-25 10:56:38]     "pilotErrorDiag": "",
[2025-11-25 10:56:38]  *** Listing of results directory ***
[2025-11-25 10:56:38] total 1337028
[2025-11-25 10:56:38] -rw-r--r-- 1 root root    576529 Nov 21 05:51 pilot3.tar.gz
[2025-11-25 10:56:38] -rw-r--r-- 1 root root      5112 Nov 21 06:16 queuedata.json
[2025-11-25 10:56:38] -rwx------ 1 4871 1028     36292 Nov 21 06:17 runpilot2-wrapper.sh
[2025-11-25 10:56:38] -rw-r--r-- 1 root root       100 Nov 24 12:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 10:56:38] -rwxr-xr-x 1 root root      7986 Nov 24 12:33 run_atlas
[2025-11-25 10:56:38] -rw-r--r-- 1 root root       105 Nov 24 12:33 job.xml
[2025-11-25 10:56:38] -rw-r--r-- 2 root root 410047865 Nov 24 12:33 EVNT.47483658._000018.pool.root.1
[2025-11-25 10:56:38] drwxrwx--x 2 root root      4096 Nov 24 12:33 shared
[2025-11-25 10:56:38] -rw-r--r-- 2 root root    590098 Nov 24 12:33 input.tar.gz
[2025-11-25 10:56:38] -rw-r--r-- 2 root root     15847 Nov 24 12:33 start_atlas.sh
[2025-11-25 10:56:38] -rw-r--r-- 1 root root         0 Nov 24 12:33 boinc_setup_complete
[2025-11-25 10:56:38] -rw-r--r-- 1 root root      9235 Nov 24 12:33 init_data.xml
[2025-11-25 10:56:38] -rw-r--r-- 1 root root         0 Nov 24 12:33 boinc_lockfile
[2025-11-25 10:56:38] -rw-r--r-- 1 root root      2784 Nov 24 12:33 pandaJob.out
[2025-11-25 10:56:38] -rw------- 1 root root    991801 Nov 24 12:34 agis_schedconf.cvmfs.json
[2025-11-25 10:56:38] drwxr-xr-x 5  320  320      4096 Nov 24 12:34 pilot3
[2025-11-25 10:56:38] -rw-r--r-- 1 root root       533 Nov 25 10:24 boinc_task_state.xml
[2025-11-25 10:56:38] -rw------- 1 root root 927879068 Nov 25 10:53 HITS.47556137._000178.pool.root.1
[2025-11-25 10:56:38] -rw------- 1 root root      1048 Nov 25 10:55 memory_monitor_summary.json
[2025-11-25 10:56:38] -rw------- 1 root root   1516240 Nov 25 10:55 agis_ddmendpoints.agis.ALL.json
[2025-11-25 10:56:38] -rw------- 1 root root   2646182 Nov 25 10:55 log.47556137._000178.job.log.tgz.1
[2025-11-25 10:56:38] -rw------- 1 root root      8600 Nov 25 10:55 heartbeat.json
[2025-11-25 10:56:38] -rw------- 1 root root        95 Nov 25 10:56 pilot_heartbeat.json
[2025-11-25 10:56:38] -rw-r--r-- 1 root root      8192 Nov 25 10:56 boinc_mmap_file
[2025-11-25 10:56:38] -rw-r--r-- 1 root root        29 Nov 25 10:56 wrapper_checkpoint.txt
[2025-11-25 10:56:38] -rw------- 1 root root      4838 Nov 25 10:56 pilotlog.txt
[2025-11-25 10:56:38] -rw------- 1 root root  10987884 Nov 25 10:56 log.47556137._000178.job.log.1
[2025-11-25 10:56:38] -rw------- 1 root root       353 Nov 25 10:56 output.list
[2025-11-25 10:56:38] -rw-r--r-- 1 root root       620 Nov 25 10:56 runtime_log
[2025-11-25 10:56:38] -rw------- 1 root root  13649920 Nov 25 10:56 result.tar.gz
[2025-11-25 10:56:38] -rw------- 1 root root       662 Nov 25 10:56 zzNKDmv7gg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTTJKDmvyVLDo.diag
[2025-11-25 10:56:38] -rw-r--r-- 1 root root      9021 Nov 25 10:56 runtime_log.err
[2025-11-25 10:56:38] -rw-r--r-- 1 root root     21998 Nov 25 10:56 stderr.txt
[2025-11-25 10:56:38] HITS file was successfully produced:
[2025-11-25 10:56:38] -rw------- 1 root root 927879068 Nov 25 10:53 shared/HITS.pool.root.1
[2025-11-25 10:56:38]  *** Contents of shared directory: ***
[2025-11-25 10:56:38] total 1320508
[2025-11-25 10:56:38] -rw-r--r-- 2 root root 410047865 Nov 24 12:33 ATLAS.root_0
[2025-11-25 10:56:38] -rw-r--r-- 2 root root    590098 Nov 24 12:33 input.tar.gz
[2025-11-25 10:56:38] -rw-r--r-- 2 root root     15847 Nov 24 12:33 start_atlas.sh
[2025-11-25 10:56:38] -rw------- 1 root root 927879068 Nov 25 10:53 HITS.pool.root.1
[2025-11-25 10:56:38] -rw------- 1 root root  13649920 Nov 25 10:56 result.tar.gz
10:56:39 (1200309): run_atlas exited; CPU time 222009.152396
10:56:39 (1200309): called boinc_finish(0)

</stderr_txt>
]]>

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