Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:28:37 (3255508): wrapper (7.7.26015): starting
10:28:37 (3255508): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 10:28:37] Arguments: --nthreads 12
[2025-11-23 10:28:37] Threads: 12
[2025-11-23 10:28:37] Checking for CVMFS
[2025-11-23 10:28:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 10:28:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 10:28:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 10:28:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 10:28:37] 2.11.5.0 1708977 24105 201332 153217 1 235 36145146 45568001 10175 130560 0 230793435 99.785 134657809 23075 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-23 10:28:37] CVMFS is ok
[2025-11-23 10:28:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 10:28:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 10:28:37] Further information can be found at the LHC@home message board.
[2025-11-23 10:28:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 10:28:37] Checking for apptainer binary...
[2025-11-23 10:28:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 10:28:37] Running /usr/bin/apptainer --version
[2025-11-23 10:28:37] apptainer version 1.4.1-1.el9
[2025-11-23 10:28:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 10:28:37] wns0085.triumf.lcg
[2025-11-23 10:28:37] apptainer works
[2025-11-23 10:28:37] Set ATHENA_PROC_NUMBER=12
[2025-11-23 10:28:37] Set ATHENA_CORE_NUMBER=12
[2025-11-23 10:28:37] Starting ATLAS job with PandaID=6894052250
[2025-11-23 10:28:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 10:31:52]  *** The last 200 lines of the pilot log: ***
[2025-11-23 10:31:52] 2025-11-23 18:31:33,211 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-23 10:31:52] 2025-11-23 18:31:33,211 | WARNING  | found no stored workdir sizes
[2025-11-23 10:31:52] 2025-11-23 18:31:33,211 | INFO     | will not add max space = 0 B to job metrics
[2025-11-23 10:31:52] 2025-11-23 18:31:33,211 | WARNING  | wrong length of table data, x=[1763922553.0], y=[1061.0] (must be same and length>=4)
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | could have reported an average CPU frequency of 2471 MHz (4 samples)
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | ..............................
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | . Timing measurements:
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | . get job = 0 s
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | . initial setup = 2 s
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | . payload setup = 6 s
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | . stage-in = 0 s
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | . payload execution = 17 s
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | . stage-out = 0 s
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | . log creation = 0 s
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | ..............................
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894052250/pilotlog.txt
[2025-11-23 10:31:52] 2025-11-23 18:31:33,225 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-23 10:31:52] - Log from pilotlog.txt -
[2025-11-23 10:31:52] 2025-11-23 18:31:33,210 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 10:31:52] 2025-11-23 18:31:33,210 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 10:31:52] 2025-11-23 18:31:33,211 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-23 10:31:52] 2025-11-23 18:31:33,211 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-23 10:31:52] 2025-11-23 18:31:33,211 | WARNING  | found no stored workdir sizes
[2025-11-23 10:31:52] 2025-11-23 18:31:33,211 | INFO     | will not add max space = 0 B to job metrics
[2025-11-23 10:31:52] 2025-11-23 18:31:33,211 | WARNING  | wrong length of table data, x=[1763922553.0], y=[1061.0] (must be same and length>=4)
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | could have reported an average CPU frequency of 2471 MHz (4 samples)
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | ..............................
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | . Timing measurements:
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | . get job = 0 s
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | . initial setup = 2 s
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | . payload setup = 6 s
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | . stage-in = 0 s
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | . payload execution = 17 s
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | . stage-out = 0 s
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | . log creation = 0 s
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | ..............................
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894052250/pilotlog.txt
[2025-11-23 10:31:52] 2025-11-23 18:31:33,225 | WARNING  | 
[2025-11-23 10:31:52] [begin log extracts]
[2025-11-23 10:31:52] - Log from pilotlog.txt -
[2025-11-23 10:31:52] 2025-11-23 18:31:33,210 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 10:31:52] 2025-11-23 18:31:33,210 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 10:31:52] 2025-11-23 18:31:33,211 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-23 10:31:52] 2025-11-23 18:31:33,211 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-23 10:31:52] 2025-11-23 18:31:33,211 | WARNING  | found no stored workdir sizes
[2025-11-23 10:31:52] 2025-11-23 18:31:33,211 | INFO     | will not add max space = 0 B to job metrics
[2025-11-23 10:31:52] 2025-11-23 18:31:33,211 | WARNING  | wrong length of table data, x=[1763922553.0], y=[1061.0] (must be same and length>=4)
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | could have reported an average CPU frequency of 2471 MHz (4 samples)
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | ..............................
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | . Timing measurements:
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | . get job = 0 s
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | . initial setup = 2 s
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | . payload setup = 6 s
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | . stage-in = 0 s
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | . payload execution = 17 s
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | . stage-out = 0 s
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | . log creation = 0 s
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | ..............................
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-23 10:31:52] 2025-11-23 18:31:33,212 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894052250/pilotlog.txt
[2025-11-23 10:31:52] [end log extracts]
[2025-11-23 10:31:52] 2025-11-23 18:31:33,226 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-11-23 10:31:52] 2025-11-23 18:31:33,226 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-23 10:31:52] 2025-11-23 18:31:33,288 | INFO     | 
[2025-11-23 10:31:52] 2025-11-23 18:31:33,288 | INFO     | job summary report
[2025-11-23 10:31:52] 2025-11-23 18:31:33,288 | INFO     | --------------------------------------------------
[2025-11-23 10:31:52] 2025-11-23 18:31:33,288 | INFO     | PanDA job id: 6894052250
[2025-11-23 10:31:52] 2025-11-23 18:31:33,289 | INFO     | task id: 47523650
[2025-11-23 10:31:52] 2025-11-23 18:31:33,289 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-23 10:29:22,382 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-23 10:31:52] 2025-11-23 18:31:33,289 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 10:31:52] 2025-11-23 18:31:33,289 | INFO     | pilot state: failed 
[2025-11-23 10:31:52] 2025-11-23 18:31:33,289 | INFO     | transexitcode: 65
[2025-11-23 10:31:52] 2025-11-23 18:31:33,289 | INFO     | exeerrorcode: 65
[2025-11-23 10:31:52] 2025-11-23 18:31:33,289 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-11-23 10:31:52] 2025-11-23 18:31:33,289 | INFO     | exitcode: 65
[2025-11-23 10:31:52] 2025-11-23 18:31:33,289 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-11-23 10:31:52] 2025-11-23 18:31:33,289 | INFO     | cpuconsumptiontime: 19 s
[2025-11-23 10:31:52] 2025-11-23 18:31:33,289 | INFO     | nevents: 0
[2025-11-23 10:31:52] 2025-11-23 18:31:33,289 | INFO     | neventsw: 0
[2025-11-23 10:31:52] 2025-11-23 18:31:33,289 | INFO     | pid: 3265689
[2025-11-23 10:31:52] 2025-11-23 18:31:33,289 | INFO     | pgrp: 3265689
[2025-11-23 10:31:52] 2025-11-23 18:31:33,289 | INFO     | corecount: 12
[2025-11-23 10:31:52] 2025-11-23 18:31:33,289 | INFO     | event service: False
[2025-11-23 10:31:52] 2025-11-23 18:31:33,289 | INFO     | sizes: {0: 2298449, 4: 2298711, 11: 2298739, 27: 2322035, 29: 2326327, 32: 2326355, 151: 2326649}
[2025-11-23 10:31:52] 2025-11-23 18:31:33,289 | INFO     | --------------------------------------------------
[2025-11-23 10:31:52] 2025-11-23 18:31:33,289 | INFO     | 
[2025-11-23 10:31:52] 2025-11-23 18:31:33,290 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-23 10:31:52] 2025-11-23 18:31:33,305 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 10:31:52] 2025-11-23 18:31:33,306 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 10:31:52] 2025-11-23 18:31:33,306 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 10:31:52] 2025-11-23 18:31:33,306 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 10:31:52] 2025-11-23 18:31:33,306 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 10:31:52] 2025-11-23 18:31:33,306 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 10:31:52] 2025-11-23 18:31:33,306 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 10:31:52] 2025-11-23 18:31:33,306 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 10:31:52] 2025-11-23 18:31:33,306 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 10:31:52] 2025-11-23 18:31:33,306 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 10:31:52] 2025-11-23 18:31:33,306 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 10:31:52] 2025-11-23 18:31:33,306 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 10:31:52] 2025-11-23 18:31:33,306 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 10:31:52] 2025-11-23 18:31:33,306 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 10:31:52] 2025-11-23 18:31:33,306 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 10:31:52] 2025-11-23 18:31:33,306 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 10:31:52] 2025-11-23 18:31:33,307 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 10:31:52] 2025-11-23 18:31:33,307 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 10:31:52] 2025-11-23 18:31:33,307 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 10:31:52] 2025-11-23 18:31:33,307 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 10:31:52] 2025-11-23 18:31:33,307 | INFO     | job 6894052250 has completed (purged errors)
[2025-11-23 10:31:52] 2025-11-23 18:31:33,307 | INFO     | overall cleanup function is called
[2025-11-23 10:31:52] 2025-11-23 18:31:34,311 | INFO     | --- collectZombieJob: --- 10, [3265689]
[2025-11-23 10:31:52] 2025-11-23 18:31:34,311 | INFO     | zombie collector waiting for pid 3265689
[2025-11-23 10:31:52] 2025-11-23 18:31:34,312 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 10:31:52] 2025-11-23 18:31:34,312 | INFO     | collected zombie processes
[2025-11-23 10:31:52] 2025-11-23 18:31:34,312 | INFO     | will attempt to kill all subprocesses of pid=3265689
[2025-11-23 10:31:52] 2025-11-23 18:31:34,449 | INFO     | process IDs to be killed: [3265689] (in reverse order)
[2025-11-23 10:31:52] 2025-11-23 18:31:34,507 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 10:31:52] 2025-11-23 18:31:34,507 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 10:31:52] 2025-11-23 18:31:34,513 | INFO     | did not find any defunct processes belonging to 3265689
[2025-11-23 10:31:52] 2025-11-23 18:31:34,519 | INFO     | did not find any defunct processes belonging to 3265689
[2025-11-23 10:31:52] 2025-11-23 18:31:34,520 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 10:31:52] 2025-11-23 18:31:34,520 | INFO     | ready for new job
[2025-11-23 10:31:52] 2025-11-23 18:31:34,520 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 10:31:52] 2025-11-23 18:31:34,522 | INFO     | ***************************************
[2025-11-23 10:31:52] 2025-11-23 18:31:34,522 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 10:31:52] 2025-11-23 18:31:34,522 | INFO     | ***************************************
[2025-11-23 10:31:52] 2025-11-23 18:31:34,522 | INFO     | 
[2025-11-23 10:31:52] 2025-11-23 18:31:34,524 | INFO     | architecture information:
[2025-11-23 10:31:52] 2025-11-23 18:31:34,525 | INFO     | executing command: cat /etc/os-release
[2025-11-23 10:31:52] 2025-11-23 18:31:34,536 | INFO     | cat /etc/os-release:
[2025-11-23 10:31:52] NAME="CentOS Linux"
[2025-11-23 10:31:52] VERSION="7 (Core)"
[2025-11-23 10:31:52] ID="centos"
[2025-11-23 10:31:52] ID_LIKE="rhel fedora"
[2025-11-23 10:31:52] VERSION_ID="7"
[2025-11-23 10:31:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 10:31:52] ANSI_COLOR="0;31"
[2025-11-23 10:31:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 10:31:52] HOME_URL="https://www.centos.org/"
[2025-11-23 10:31:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 10:31:52] 
[2025-11-23 10:31:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 10:31:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 10:31:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 10:31:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 10:31:52] 
[2025-11-23 10:31:52] 2025-11-23 18:31:34,536 | INFO     | ***************************************
[2025-11-23 10:31:52] 2025-11-23 18:31:35,039 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-23 10:31:52] 2025-11-23 18:31:35,051 | INFO     | sufficient remaining disk space (1859542581248 B)
[2025-11-23 10:31:52] 2025-11-23 18:31:35,051 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 10:31:52] 2025-11-23 18:31:35,051 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 10:31:52] 2025-11-23 18:31:35,052 | INFO     | update_server=False
[2025-11-23 10:31:52] 2025-11-23 18:31:35,052 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 10:31:52] 2025-11-23 18:31:35,052 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-23 10:31:52] 2025-11-23 18:31:35,052 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 10:31:52] 2025-11-23 18:31:35,052 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 10:31:52] 2025-11-23 18:31:35,052 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 10:31:52] 2025-11-23 18:31:35,052 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 10:31:52] 2025-11-23 18:31:35,279 | INFO     | all payload control threads have been joined
[2025-11-23 10:31:52] 2025-11-23 18:31:35,340 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 10:31:52] 2025-11-23 18:31:35,341 | INFO     | aborting loop
[2025-11-23 10:31:52] 2025-11-23 18:31:35,598 | INFO     | all data control threads have been joined
[2025-11-23 10:31:52] 2025-11-23 18:31:35,625 | INFO     | all job control threads have been joined
[2025-11-23 10:31:52] 2025-11-23 18:31:36,057 | INFO     | [job] queue monitor thread has finished
[2025-11-23 10:31:52] 2025-11-23 18:31:36,057 | INFO     | [job] retrieve thread has finished
[2025-11-23 10:31:52] 2025-11-23 18:31:36,284 | INFO     | [payload] control thread has finished
[2025-11-23 10:31:52] 2025-11-23 18:31:36,301 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 10:31:52] 2025-11-23 18:31:36,345 | INFO     | [job] job monitor thread has finished
[2025-11-23 10:31:52] 2025-11-23 18:31:36,383 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 10:31:52] 2025-11-23 18:31:36,434 | INFO     | [job] validate thread has finished
[2025-11-23 10:31:52] 2025-11-23 18:31:36,589 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 10:31:52] 2025-11-23 18:31:36,603 | INFO     | [data] control thread has finished
[2025-11-23 10:31:52] 2025-11-23 18:31:36,630 | INFO     | [job] control thread has finished
[2025-11-23 10:31:52] 2025-11-23 18:31:36,659 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 10:31:52] 2025-11-23 18:31:36,823 | INFO     | [payload] failed_post thread has finished
[2025-11-23 10:31:52] 2025-11-23 18:31:37,153 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 10:31:52] 2025-11-23 18:31:37,260 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 10:31:52] 2025-11-23 18:31:37,395 | INFO     | [payload] validate_post thread has finished
[2025-11-23 10:31:52] 2025-11-23 18:31:37,542 | INFO     | [data] copytool_in thread has finished
[2025-11-23 10:31:52] 2025-11-23 18:31:38,388 | INFO     | [data] copytool_out thread has finished
[2025-11-23 10:31:52] 2025-11-23 18:31:41,163 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 10:31:52] 2025-11-23 18:31:46,722 | INFO     | [monitor] cgroup control has ended
[2025-11-23 10:31:52] 2025-11-23 18:31:47,285 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140194167084864)>', '<ExcThread(monitor, started 140193487116032)>']
[2025-11-23 10:31:52] 2025-11-23 18:31:48,120 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 10:31:52] 2025-11-23 18:31:48,120 | INFO     | [monitor] control thread has ended
[2025-11-23 10:31:52] 2025-11-23 18:31:52,310 | INFO     | all workflow threads have been joined
[2025-11-23 10:31:52] 2025-11-23 18:31:52,310 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 10:31:52] 2025-11-23 18:31:52,311 | INFO     | traces error code: 0
[2025-11-23 10:31:52] 2025-11-23 18:31:52,311 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 10:31:52] 2025-11-23 18:31:52,448 [wrapper] ==== pilot stdout END ====
[2025-11-23 10:31:52] 2025-11-23 18:31:52,450 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 10:31:52] 2025-11-23 18:31:52,452 [wrapper] pilotpid: 3259150
[2025-11-23 10:31:52] 2025-11-23 18:31:52,454 [wrapper] Pilot exit status: 0
[2025-11-23 10:31:52] 2025-11-23 18:31:52,461 [wrapper] pandaids: 6894052250
[2025-11-23 10:31:52] 2025-11-23 18:31:52,496 [wrapper] cleanup supervisor_pilot 3259156 3259151
[2025-11-23 10:31:52] 2025-11-23 18:31:52,499 [wrapper] Test setup, not cleaning
[2025-11-23 10:31:52] 2025-11-23 18:31:52,501 [wrapper] apfmon messages muted
[2025-11-23 10:31:52] 2025-11-23 18:31:52,503 [wrapper] ==== wrapper stdout END ====
[2025-11-23 10:31:52] 2025-11-23 18:31:52,505 [wrapper] ==== wrapper stderr END ====
[2025-11-23 10:31:52]  *** Error codes and diagnostics ***
[2025-11-23 10:31:52]     "exeErrorCode": 65,
[2025-11-23 10:31:52]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-11-23 10:31:52]     "pilotErrorCode": 1305,
[2025-11-23 10:31:52]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-11-23 10:31:52]  *** Listing of results directory ***
[2025-11-23 10:31:52] total 295020
[2025-11-23 10:31:52] -rw-r--r--. 1 boinc boinc    576529 Nov 23 00:37 pilot3.tar.gz
[2025-11-23 10:31:52] -rw-r--r--. 1 boinc boinc      5112 Nov 23 01:07 queuedata.json
[2025-11-23 10:31:52] -rwx------. 1 boinc boinc     36292 Nov 23 01:12 runpilot2-wrapper.sh
[2025-11-23 10:31:52] -rw-r--r--. 1 boinc boinc       100 Nov 23 10:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 10:31:52] -rwxr-xr-x. 1 boinc boinc      7986 Nov 23 10:28 run_atlas
[2025-11-23 10:31:52] -rw-r--r--. 1 boinc boinc       105 Nov 23 10:28 job.xml
[2025-11-23 10:31:52] -rw-r--r--. 2 boinc boinc 297970808 Nov 23 10:28 EVNT.47523648._000004.pool.root.1
[2025-11-23 10:31:52] -rw-r--r--. 1 boinc boinc      6595 Nov 23 10:28 init_data.xml
[2025-11-23 10:31:52] -rw-r--r--. 2 boinc boinc     15847 Nov 23 10:28 start_atlas.sh
[2025-11-23 10:31:52] drwxrwx--x. 2 boinc boinc      4096 Nov 23 10:28 shared
[2025-11-23 10:31:52] -rw-r--r--. 2 boinc boinc    589957 Nov 23 10:28 input.tar.gz
[2025-11-23 10:31:52] -rw-r--r--. 1 boinc boinc         0 Nov 23 10:28 boinc_lockfile
[2025-11-23 10:31:52] -rw-r--r--. 1 boinc boinc      2623 Nov 23 10:28 pandaJob.out
[2025-11-23 10:31:52] -rw-------. 1 boinc boinc    989786 Nov 23 10:28 agis_schedconf.cvmfs.json
[2025-11-23 10:31:52] -rw-------. 1 boinc boinc   1526164 Nov 23 10:28 agis_ddmendpoints.agis.ALL.json
[2025-11-23 10:31:52] drwx------. 5 boinc boinc      4096 Nov 23 10:28 pilot3
[2025-11-23 10:31:52] -rw-r--r--. 1 boinc boinc       522 Nov 23 10:29 boinc_task_state.xml
[2025-11-23 10:31:52] -rw-------. 1 boinc boinc       956 Nov 23 10:29 memory_monitor_summary.json
[2025-11-23 10:31:52] -rw-------. 1 boinc boinc     20886 Nov 23 10:29 log.47523650._000098.job.log.tgz.1
[2025-11-23 10:31:52] -rw-------. 1 boinc boinc        95 Nov 23 10:30 pilot_heartbeat.json
[2025-11-23 10:31:52] -rw-------. 1 boinc boinc      8361 Nov 23 10:31 heartbeat.json
[2025-11-23 10:31:52] -rw-r--r--. 1 boinc boinc      8192 Nov 23 10:31 boinc_mmap_file
[2025-11-23 10:31:52] -rw-r--r--. 1 boinc boinc        22 Nov 23 10:31 wrapper_checkpoint.txt
[2025-11-23 10:31:52] -rw-------. 1 boinc boinc      4551 Nov 23 10:31 pilotlog.txt
[2025-11-23 10:31:52] -rw-------. 1 boinc boinc     86224 Nov 23 10:31 log.47523650._000098.job.log.1
[2025-11-23 10:31:52] -rw-------. 1 boinc boinc       188 Nov 23 10:31 output.list
[2025-11-23 10:31:52] -rw-r--r--. 1 boinc boinc       620 Nov 23 10:31 runtime_log
[2025-11-23 10:31:52] -rw-------. 1 boinc boinc    122880 Nov 23 10:31 result.tar.gz
[2025-11-23 10:31:52] -rw-r--r--. 1 boinc boinc      8636 Nov 23 10:31 runtime_log.err
[2025-11-23 10:31:52] -rw-------. 1 boinc boinc       647 Nov 23 10:31 hlUKDmFKLh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdlKKDmhl4Izn.diag
[2025-11-23 10:31:52] -rw-r--r--. 1 boinc boinc     21684 Nov 23 10:31 stderr.txt
[2025-11-23 10:31:52] No HITS result produced
[2025-11-23 10:31:52]  *** Contents of shared directory: ***
[2025-11-23 10:31:52] total 291708
[2025-11-23 10:31:52] -rw-r--r--. 2 boinc boinc 297970808 Nov 23 10:28 ATLAS.root_0
[2025-11-23 10:31:52] -rw-r--r--. 2 boinc boinc     15847 Nov 23 10:28 start_atlas.sh
[2025-11-23 10:31:52] -rw-r--r--. 2 boinc boinc    589957 Nov 23 10:28 input.tar.gz
[2025-11-23 10:31:52] -rw-------. 1 boinc boinc    122880 Nov 23 10:31 result.tar.gz
10:31:54 (3255508): run_atlas exited; CPU time 21.407767
10:31:54 (3255508): called boinc_finish(0)

</stderr_txt>
]]>

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