Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:37:50 (4010118): wrapper (7.7.26015): starting
13:37:50 (4010118): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 13:37:50] Arguments: --nthreads 8
[2025-11-23 13:37:50] Threads: 8
[2025-11-23 13:37:50] Checking for CVMFS
[2025-11-23 13:37:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 13:37:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 13:37:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 13:37:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 13:37:53] 2.13.3.0 7385 26036 203352 153217 1 422 29049658 32503808 48790 16776704 0 373818789 99.674 310802328 49447 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-23 13:37:53] CVMFS is ok
[2025-11-23 13:37:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 13:37:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 13:37:53] Further information can be found at the LHC@home message board.
[2025-11-23 13:37:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 13:37:53] Checking for apptainer binary...
[2025-11-23 13:37:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 13:37:53] Running /usr/bin/apptainer --version
[2025-11-23 13:37:53] apptainer version 1.4.4-1.el9
[2025-11-23 13:37:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 13:37:54] c8-7-1.aglt2.org
[2025-11-23 13:37:54] apptainer works
[2025-11-23 13:37:54] Set ATHENA_PROC_NUMBER=8
[2025-11-23 13:37:54] Set ATHENA_CORE_NUMBER=8
[2025-11-23 13:37:54] Starting ATLAS job with PandaID=6895337514
[2025-11-23 13:37:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 23:19:56]  *** The last 200 lines of the pilot log: ***
[2025-11-23 23:19:56] 2025-11-24 04:18:49,633 | INFO     | monitor loop #1920: job 0:6895337514 is in state 'finished'
[2025-11-23 23:19:56] 2025-11-24 04:18:49,633 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 23:19:56] 2025-11-24 04:18:50,128 | INFO     | PID=4019198 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 23:19:56] 2025-11-24 04:18:50,129 | INFO     | .. there are 67 such processes running
[2025-11-23 23:19:56] 2025-11-24 04:18:51,146 | INFO     | time since job start (34786s) is within the limit (172800.0s)
[2025-11-23 23:19:56] 2025-11-24 04:18:52,139 | INFO     | monitor loop #1921: job 0:6895337514 is in state 'finished'
[2025-11-23 23:19:56] 2025-11-24 04:18:52,139 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 23:19:56] 2025-11-24 04:18:53,153 | INFO     | time since job start (34788s) is within the limit (172800.0s)
[2025-11-23 23:19:56] 2025-11-24 04:18:54,660 | INFO     | monitor loop #1922: job 0:6895337514 is in state 'finished'
[2025-11-23 23:19:56] 2025-11-24 04:18:54,660 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 23:19:56] 2025-11-24 04:18:55,168 | INFO     | time since job start (34790s) is within the limit (172800.0s)
[2025-11-23 23:19:56] 2025-11-24 04:18:57,175 | INFO     | time since job start (34792s) is within the limit (172800.0s)
[2025-11-23 23:19:56] 2025-11-24 04:18:57,176 | INFO     | monitor loop #1923: job 0:6895337514 is in state 'finished'
[2025-11-23 23:19:56] 2025-11-24 04:18:57,176 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 23:19:56] 2025-11-24 04:18:59,181 | INFO     | time since job start (34794s) is within the limit (172800.0s)
[2025-11-23 23:19:56] 2025-11-24 04:18:59,683 | INFO     | monitor loop #1924: job 0:6895337514 is in state 'finished'
[2025-11-23 23:19:56] 2025-11-24 04:18:59,683 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 23:19:56] 2025-11-24 04:18:59,713 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-23 23:19:56] 2025-11-24 04:18:59,745 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3791.9634062500013
[2025-11-23 23:19:56] 2025-11-24 04:18:59,772 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895337514/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 23:19:56] 2025-11-24 04:18:59,773 | INFO     | extracted standard info from prmon json
[2025-11-23 23:19:56] 2025-11-24 04:18:59,773 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 23:19:56] 2025-11-24 04:18:59,773 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 23:19:56] 2025-11-24 04:18:59,791 | INFO     | fitting pss+swap vs Time
[2025-11-23 23:19:56] 2025-11-24 04:18:59,792 | INFO     | sum of square deviations: 56823300253.955826
[2025-11-23 23:19:56] 2025-11-24 04:18:59,811 | INFO     | sum of deviations: 345827580586.4472
[2025-11-23 23:19:56] 2025-11-24 04:18:59,811 | INFO     | mean x: 1763940574.508803
[2025-11-23 23:19:56] 2025-11-24 04:18:59,811 | INFO     | mean y: 2772876.51056338
[2025-11-23 23:19:56] 2025-11-24 04:18:59,811 | INFO     | intersect: -10732599733.921015
[2025-11-23 23:19:56] 2025-11-24 04:18:59,812 | INFO     | chi2: 26.294011520574017
[2025-11-23 23:19:56] 2025-11-24 04:18:59,812 | INFO     | sum of square deviations: 55336042473.82233
[2025-11-23 23:19:56] 2025-11-24 04:18:59,822 | INFO     | sum of deviations: 544210839915.6693
[2025-11-23 23:19:56] 2025-11-24 04:18:59,822 | INFO     | mean x: 1763940422.017762
[2025-11-23 23:19:56] 2025-11-24 04:18:59,822 | INFO     | mean y: 2793219.8330373
[2025-11-23 23:19:56] 2025-11-24 04:18:59,822 | INFO     | intersect: -17344950776.886818
[2025-11-23 23:19:56] 2025-11-24 04:18:59,823 | INFO     | chi2: 22.330287353160305
[2025-11-23 23:19:56] 2025-11-24 04:18:59,823 | INFO     | current chi2=22.330287353160305 (change=15.074627027953708 %)
[2025-11-23 23:19:56] 2025-11-24 04:18:59,823 | INFO     | right removable region: 562
[2025-11-23 23:19:56] 2025-11-24 04:18:59,823 | INFO     | sum of square deviations: 55335692943.822334
[2025-11-23 23:19:56] 2025-11-24 04:18:59,836 | INFO     | sum of deviations: 116306177403.84576
[2025-11-23 23:19:56] 2025-11-24 04:18:59,844 | INFO     | mean x: 1763940727.017762
[2025-11-23 23:19:56] 2025-11-24 04:18:59,844 | INFO     | mean y: 2796403.115452931
[2025-11-23 23:19:56] 2025-11-24 04:18:59,844 | INFO     | intersect: -3704705793.2458596
[2025-11-23 23:19:56] 2025-11-24 04:18:59,844 | INFO     | chi2: 21.584012803136567
[2025-11-23 23:19:56] 2025-11-24 04:18:59,844 | INFO     | current chi2=21.584012803136567 (change=17.912819098569514 %)
[2025-11-23 23:19:56] 2025-11-24 04:18:59,844 | INFO     | left removable region: 10
[2025-11-23 23:19:56] 2025-11-24 04:18:59,845 | INFO     | sum of square deviations: 52155225461.20123
[2025-11-23 23:19:56] 2025-11-24 04:18:59,852 | INFO     | sum of deviations: 154356073215.3973
[2025-11-23 23:19:56] 2025-11-24 04:18:59,853 | INFO     | mean x: 1763940696.5380435
[2025-11-23 23:19:56] 2025-11-24 04:18:59,853 | INFO     | mean y: 2843206.052536232
[2025-11-23 23:19:56] 2025-11-24 04:18:59,853 | INFO     | intersect: -5217630042.692081
[2025-11-23 23:19:56] 2025-11-24 04:18:59,853 | INFO     | chi2: 13.104883681761466
[2025-11-23 23:19:56] 2025-11-24 04:18:59,853 | INFO     | current memory leak: 2.96 B/s (using 552 data points, chi2=13.10)
[2025-11-23 23:19:56] 2025-11-24 04:18:59,854 | INFO     | could have reported an average CPU frequency of 3796 MHz (22 samples)
[2025-11-23 23:19:56] 2025-11-24 04:18:59,862 | INFO     | ..............................
[2025-11-23 23:19:56] 2025-11-24 04:18:59,862 | INFO     | . Timing measurements:
[2025-11-23 23:19:56] 2025-11-24 04:18:59,862 | INFO     | . get job = 0 s
[2025-11-23 23:19:56] 2025-11-24 04:18:59,862 | INFO     | . initial setup = 4 s
[2025-11-23 23:19:56] 2025-11-24 04:18:59,862 | INFO     | . payload setup = 38 s
[2025-11-23 23:19:56] 2025-11-24 04:18:59,862 | INFO     | . stage-in = 0 s
[2025-11-23 23:19:56] 2025-11-24 04:18:59,862 | INFO     | . payload execution = 34638 s
[2025-11-23 23:19:56] 2025-11-24 04:18:59,862 | INFO     | . stage-out = 10 s
[2025-11-23 23:19:56] 2025-11-24 04:18:59,862 | INFO     | . log creation = 3 s
[2025-11-23 23:19:56] 2025-11-24 04:18:59,862 | INFO     | ..............................
[2025-11-23 23:19:56] 2025-11-24 04:19:00,029 | INFO     | 
[2025-11-23 23:19:56] 2025-11-24 04:19:00,029 | INFO     | job summary report
[2025-11-23 23:19:56] 2025-11-24 04:19:00,029 | INFO     | --------------------------------------------------
[2025-11-23 23:19:56] 2025-11-24 04:19:00,029 | INFO     | PanDA job id: 6895337514
[2025-11-23 23:19:56] 2025-11-24 04:19:00,029 | INFO     | task id: 47556137
[2025-11-23 23:19:56] 2025-11-24 04:19:00,029 | INFO     | errors: (none)
[2025-11-23 23:19:56] 2025-11-24 04:19:00,029 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 23:19:56] 2025-11-24 04:19:00,029 | INFO     | pilot state: finished 
[2025-11-23 23:19:56] 2025-11-24 04:19:00,029 | INFO     | transexitcode: 0
[2025-11-23 23:19:56] 2025-11-24 04:19:00,029 | INFO     | exeerrorcode: 0
[2025-11-23 23:19:56] 2025-11-24 04:19:00,029 | INFO     | exeerrordiag: 
[2025-11-23 23:19:56] 2025-11-24 04:19:00,029 | INFO     | exitcode: 0
[2025-11-23 23:19:56] 2025-11-24 04:19:00,029 | INFO     | exitmsg: OK
[2025-11-23 23:19:56] 2025-11-24 04:19:00,029 | INFO     | cpuconsumptiontime: 133360 s
[2025-11-23 23:19:56] 2025-11-24 04:19:00,029 | INFO     | nevents: 1000
[2025-11-23 23:19:56] 2025-11-24 04:19:00,029 | INFO     | neventsw: 0
[2025-11-23 23:19:56] 2025-11-24 04:19:00,029 | INFO     | pid: 4044230
[2025-11-23 23:19:56] 2025-11-24 04:19:00,029 | INFO     | pgrp: 4044230
[2025-11-23 23:19:56] 2025-11-24 04:19:00,029 | INFO     | corecount: 8
[2025-11-23 23:19:56] 2025-11-24 04:19:00,029 | INFO     | event service: False
[2025-11-23 23:19:56] 2025-11-24 04:19:00,030 | INFO     | sizes: {0: 2297927, 1: 2298783, 2: 2298811, 12: 2298811, 23: 2298839, 29: 2299129, 34: 2299285, 34681: 2339943, 34682: 2339942, 34692: 2348992, 34694: 2349048, 347
[2025-11-23 23:19:56] 2025-11-24 04:19:00,030 | INFO     | --------------------------------------------------
[2025-11-23 23:19:56] 2025-11-24 04:19:00,030 | INFO     | 
[2025-11-23 23:19:56] 2025-11-24 04:19:00,030 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-23 23:19:56] 2025-11-24 04:19:00,151 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 23:19:56] 2025-11-24 04:19:00,151 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 23:19:56] 2025-11-24 04:19:00,151 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 23:19:56] 2025-11-24 04:19:00,151 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 23:19:56] 2025-11-24 04:19:00,151 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 23:19:56] 2025-11-24 04:19:00,151 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 23:19:56] 2025-11-24 04:19:00,151 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 23:19:56] 2025-11-24 04:19:00,152 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 23:19:56] 2025-11-24 04:19:00,152 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 23:19:56] 2025-11-24 04:19:00,152 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 23:19:56] 2025-11-24 04:19:00,152 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 23:19:56] 2025-11-24 04:19:00,152 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 23:19:56] 2025-11-24 04:19:00,152 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 23:19:56] 2025-11-24 04:19:00,152 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 23:19:56] 2025-11-24 04:19:00,152 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 23:19:56] 2025-11-24 04:19:00,152 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 23:19:56] 2025-11-24 04:19:00,152 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 23:19:56] 2025-11-24 04:19:00,152 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 23:19:56] 2025-11-24 04:19:00,152 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 23:19:56] 2025-11-24 04:19:00,152 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 23:19:56] 2025-11-24 04:19:00,152 | INFO     | job 6895337514 has completed (purged errors)
[2025-11-23 23:19:56] 2025-11-24 04:19:00,152 | INFO     | overall cleanup function is called
[2025-11-23 23:19:56] 2025-11-24 04:19:01,171 | INFO     | --- collectZombieJob: --- 10, [4044230]
[2025-11-23 23:19:56] 2025-11-24 04:19:01,171 | INFO     | zombie collector waiting for pid 4044230
[2025-11-23 23:19:56] 2025-11-24 04:19:01,171 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 23:19:56] 2025-11-24 04:19:01,171 | INFO     | collected zombie processes
[2025-11-23 23:19:56] 2025-11-24 04:19:01,171 | INFO     | will attempt to kill all subprocesses of pid=4044230
[2025-11-23 23:19:56] 2025-11-24 04:19:03,559 | INFO     | process IDs to be killed: [4044230] (in reverse order)
[2025-11-23 23:19:56] 2025-11-24 04:19:03,950 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 23:19:56] 2025-11-24 04:19:03,950 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 23:19:56] 2025-11-24 04:19:04,014 | INFO     | did not find any defunct processes belonging to 4044230
[2025-11-23 23:19:56] 2025-11-24 04:19:04,062 | INFO     | did not find any defunct processes belonging to 4044230
[2025-11-23 23:19:56] 2025-11-24 04:19:04,075 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 23:19:56] 2025-11-24 04:19:04,075 | INFO     | ready for new job
[2025-11-23 23:19:56] 2025-11-24 04:19:04,075 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 23:19:56] 2025-11-24 04:19:04,077 | INFO     | ***************************************
[2025-11-23 23:19:56] 2025-11-24 04:19:04,078 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 23:19:56] 2025-11-24 04:19:04,078 | INFO     | ***************************************
[2025-11-23 23:19:56] 2025-11-24 04:19:04,078 | INFO     | 
[2025-11-23 23:19:56] 2025-11-24 04:19:04,086 | INFO     | architecture information:
[2025-11-23 23:19:56] 2025-11-24 04:19:04,098 | INFO     | executing command: cat /etc/os-release
[2025-11-23 23:19:56] 2025-11-24 04:19:04,212 | INFO     | cat /etc/os-release:
[2025-11-23 23:19:56] NAME="CentOS Linux"
[2025-11-23 23:19:56] VERSION="7 (Core)"
[2025-11-23 23:19:56] ID="centos"
[2025-11-23 23:19:56] ID_LIKE="rhel fedora"
[2025-11-23 23:19:56] VERSION_ID="7"
[2025-11-23 23:19:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 23:19:56] ANSI_COLOR="0;31"
[2025-11-23 23:19:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 23:19:56] HOME_URL="https://www.centos.org/"
[2025-11-23 23:19:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 23:19:56] 
[2025-11-23 23:19:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 23:19:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 23:19:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 23:19:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 23:19:56] 
[2025-11-23 23:19:56] 2025-11-24 04:19:04,212 | INFO     | ***************************************
[2025-11-23 23:19:56] 2025-11-24 04:19:04,731 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-23 23:19:56] 2025-11-24 04:19:04,893 | INFO     | sufficient remaining disk space (83079725056 B)
[2025-11-23 23:19:56] 2025-11-24 04:19:04,894 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 23:19:56] 2025-11-24 04:19:04,894 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 23:19:56] 2025-11-24 04:19:04,894 | INFO     | update_server=False
[2025-11-23 23:19:56] 2025-11-24 04:19:04,894 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 23:19:56] 2025-11-24 04:19:04,894 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 23:19:56] 2025-11-24 04:19:05,066 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 23:19:56] 2025-11-24 04:19:05,219 | INFO     | all data control threads have been joined
[2025-11-23 23:19:56] 2025-11-24 04:19:05,302 | INFO     | all payload control threads have been joined
[2025-11-23 23:19:56] 2025-11-24 04:19:05,349 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 23:19:56] 2025-11-24 04:19:05,723 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 23:19:56] 2025-11-24 04:19:05,723 | INFO     | aborting loop
[2025-11-23 23:19:56] 2025-11-24 04:19:05,900 | INFO     | [job] retrieve thread has finished
[2025-11-23 23:19:56] 2025-11-24 04:19:05,956 | INFO     | [payload] failed_post thread has finished
[2025-11-23 23:19:56] 2025-11-24 04:19:06,062 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 23:19:56] 2025-11-24 04:19:06,072 | INFO     | [job] queue monitor thread has finished
[2025-11-23 23:19:56] 2025-11-24 04:19:06,094 | INFO     | [job] validate thread has finished
[2025-11-23 23:19:56] 2025-11-24 04:19:06,165 | INFO     | all job control threads have been joined
[2025-11-23 23:19:56] 2025-11-24 04:19:06,204 | INFO     | [payload] validate_post thread has finished
[2025-11-23 23:19:56] 2025-11-24 04:19:06,226 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 23:19:56] 2025-11-24 04:19:06,227 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 23:19:56] 2025-11-24 04:19:06,227 | INFO     | [data] copytool_in thread has finished
[2025-11-23 23:19:56] 2025-11-24 04:19:06,277 | INFO     | [data] control thread has finished
[2025-11-23 23:19:56] 2025-11-24 04:19:06,310 | INFO     | [payload] control thread has finished
[2025-11-23 23:19:56] 2025-11-24 04:19:06,336 | INFO     | [monitor] cgroup control has ended
[2025-11-23 23:19:56] 2025-11-24 04:19:06,729 | INFO     | [job] job monitor thread has finished
[2025-11-23 23:19:56] 2025-11-24 04:19:06,901 | INFO     | [data] copytool_out thread has finished
[2025-11-23 23:19:56] 2025-11-24 04:19:07,171 | INFO     | [job] control thread has finished
[2025-11-23 23:19:56] 2025-11-24 04:19:07,321 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 23:19:56] 2025-11-24 04:19:09,364 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 23:19:56] 2025-11-24 04:19:09,525 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140236948334400)>', '<ExcThread(monitor, started 140236319356672)>']
[2025-11-23 23:19:56] 2025-11-24 04:19:14,552 | INFO     | all workflow threads have been joined
[2025-11-23 23:19:56] 2025-11-24 04:19:14,554 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 23:19:56] 2025-11-24 04:19:14,554 | INFO     | traces error code: 0
[2025-11-23 23:19:56] 2025-11-24 04:19:14,554 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 23:19:56] 2025-11-24 04:19:33,659 | INFO     | PID=4019198 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 23:19:56] 2025-11-24 04:19:33,659 | INFO     | .. there are 67 such processes running
[2025-11-23 23:19:56] 2025-11-24 04:19:33,660 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 23:19:56] 2025-11-24 04:19:33,660 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 23:19:56] 2025-11-24 04:19:33,660 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 23:19:56] 2025-11-24 04:19:33,660 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 23:19:56] 2025-11-24 04:19:33,660 | INFO     | [monitor] control thread has ended
[2025-11-23 23:19:56] 2025-11-24 04:19:34,208 [wrapper] ==== pilot stdout END ====
[2025-11-23 23:19:56] 2025-11-24 04:19:34,259 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 23:19:56] 2025-11-24 04:19:34,290 [wrapper] pilotpid: 4019198
[2025-11-23 23:19:56] 2025-11-24 04:19:34,313 [wrapper] Pilot exit status: 0
[2025-11-23 23:19:56] 2025-11-24 04:19:34,478 [wrapper] pandaids: 6895337514
[2025-11-23 23:19:56] 2025-11-24 04:19:34,752 [wrapper] cleanup supervisor_pilot 1613183 4019199
[2025-11-23 23:19:56] 2025-11-24 04:19:34,779 [wrapper] Test setup, not cleaning
[2025-11-23 23:19:56] 2025-11-24 04:19:34,813 [wrapper] apfmon messages muted
[2025-11-23 23:19:56] 2025-11-24 04:19:34,848 [wrapper] ==== wrapper stdout END ====
[2025-11-23 23:19:56] 2025-11-24 04:19:34,879 [wrapper] ==== wrapper stderr END ====
[2025-11-23 23:19:56]  *** Error codes and diagnostics ***
[2025-11-23 23:19:56]     "exeErrorCode": 0,
[2025-11-23 23:19:56]     "exeErrorDiag": "",
[2025-11-23 23:19:56]     "pilotErrorCode": 0,
[2025-11-23 23:19:56]     "pilotErrorDiag": "",
[2025-11-23 23:19:56]  *** Listing of results directory ***
[2025-11-23 23:19:56] total 1304108
[2025-11-23 23:19:56] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 02:52 pilot3.tar.gz
[2025-11-23 23:19:56] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 03:12 queuedata.json
[2025-11-23 23:19:56] -rwx------. 1 boincer umatlas     36292 Nov 22 03:13 runpilot2-wrapper.sh
[2025-11-23 23:19:56] -rw-r--r--. 1 boincer umatlas       100 Nov 23 13:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 23:19:56] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 13:37 run_atlas
[2025-11-23 23:19:56] -rw-r--r--. 1 boincer umatlas       105 Nov 23 13:37 job.xml
[2025-11-23 23:19:56] -rw-r--r--. 2 boincer umatlas 409776412 Nov 23 13:37 EVNT.47483658._000309.pool.root.1
[2025-11-23 23:19:56] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 13:37 start_atlas.sh
[2025-11-23 23:19:56] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 13:37 shared
[2025-11-23 23:19:56] -rw-r--r--. 2 boincer umatlas    590101 Nov 23 13:37 input.tar.gz
[2025-11-23 23:19:56] -rw-r--r--. 1 boincer umatlas         0 Nov 23 13:37 boinc_lockfile
[2025-11-23 23:19:56] -rw-r--r--. 1 boincer umatlas      2784 Nov 23 13:37 pandaJob.out
[2025-11-23 23:19:56] -rw-------. 1 boincer umatlas        57 Nov 23 13:37 setup.sh.local
[2025-11-23 23:19:56] -rw-------. 1 boincer umatlas    989786 Nov 23 13:39 agis_schedconf.cvmfs.json
[2025-11-23 23:19:56] drwx------. 5 boincer umatlas      4096 Nov 23 13:39 pilot3
[2025-11-23 23:19:56] -rw-r--r--. 1 boincer umatlas       533 Nov 23 22:54 boinc_task_state.xml
[2025-11-23 23:19:56] -rw-r--r--. 1 boincer umatlas      7172 Nov 23 23:13 init_data.xml
[2025-11-23 23:19:56] -rw-------. 1 boincer umatlas 909758486 Nov 23 23:17 HITS.47556137._003059.pool.root.1
[2025-11-23 23:19:56] -rw-------. 1 boincer umatlas      1078 Nov 23 23:18 memory_monitor_summary.json
[2025-11-23 23:19:56] -rw-------. 1 boincer umatlas   1526164 Nov 23 23:18 agis_ddmendpoints.agis.ALL.json
[2025-11-23 23:19:56] -rw-------. 1 boincer umatlas   1780675 Nov 23 23:18 log.47556137._003059.job.log.tgz.1
[2025-11-23 23:19:56] -rw-------. 1 boincer umatlas      8608 Nov 23 23:18 heartbeat.json
[2025-11-23 23:19:56] -rw-------. 1 boincer umatlas        95 Nov 23 23:19 pilot_heartbeat.json
[2025-11-23 23:19:56] -rw-------. 1 boincer umatlas       823 Nov 23 23:19 pilotlog.txt
[2025-11-23 23:19:56] -rw-------. 1 boincer umatlas   4193137 Nov 23 23:19 log.47556137._003059.job.log.1
[2025-11-23 23:19:56] -rw-------. 1 boincer umatlas       353 Nov 23 23:19 output.list
[2025-11-23 23:19:56] -rw-r--r--. 1 boincer umatlas       620 Nov 23 23:19 runtime_log
[2025-11-23 23:19:56] -rw-------. 1 boincer umatlas   5990400 Nov 23 23:19 result.tar.gz
[2025-11-23 23:19:56] -rw-------. 1 boincer umatlas       663 Nov 23 23:19 tXFNDmWvxg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm92JKDmpbQVzm.diag
[2025-11-23 23:19:56] -rw-r--r--. 1 boincer umatlas      9333 Nov 23 23:19 runtime_log.err
[2025-11-23 23:19:56] -rw-r--r--. 1 boincer umatlas        29 Nov 23 23:19 wrapper_checkpoint.txt
[2025-11-23 23:19:56] -rw-r--r--. 1 boincer umatlas      8192 Nov 23 23:19 boinc_mmap_file
[2025-11-23 23:19:56] -rw-r--r--. 1 boincer umatlas     21588 Nov 23 23:19 stderr.txt
[2025-11-23 23:19:56] HITS file was successfully produced:
[2025-11-23 23:19:56] -rw-------. 1 boincer umatlas 909758486 Nov 23 23:17 shared/HITS.pool.root.1
[2025-11-23 23:19:56]  *** Contents of shared directory: ***
[2025-11-23 23:19:56] total 1295072
[2025-11-23 23:19:56] -rw-r--r--. 2 boincer umatlas 409776412 Nov 23 13:37 ATLAS.root_0
[2025-11-23 23:19:56] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 13:37 start_atlas.sh
[2025-11-23 23:19:56] -rw-r--r--. 2 boincer umatlas    590101 Nov 23 13:37 input.tar.gz
[2025-11-23 23:19:56] -rw-------. 1 boincer umatlas 909758486 Nov 23 23:17 HITS.pool.root.1
[2025-11-23 23:19:56] -rw-------. 1 boincer umatlas   5990400 Nov 23 23:19 result.tar.gz
23:19:57 (4010118): run_atlas exited; CPU time 134175.797596
23:19:57 (4010118): called boinc_finish(0)

</stderr_txt>
]]>

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