Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:21:57 (1752464): wrapper (7.7.26015): starting
13:21:57 (1752464): wrapper: running run_atlas (--nthreads 3)
[2025-11-28 13:21:57] Arguments: --nthreads 3
[2025-11-28 13:21:57] Threads: 3
[2025-11-28 13:21:57] Checking for CVMFS
[2025-11-28 13:21:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 13:21:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 13:21:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 13:21:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 13:21:57] 2.9.2.0 1572593 1373 61136 153408 1 81 34399359 36864001 0 130560 0 493592 99.977 56776 6542 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-28 13:21:57] CVMFS is ok
[2025-11-28 13:21:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 13:21:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-28 13:21:57] Further information can be found at the LHC@home message board.
[2025-11-28 13:21:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 13:21:57] Checking for apptainer binary...
[2025-11-28 13:21:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 13:21:57] Running /usr/bin/apptainer --version
[2025-11-28 13:21:57] apptainer version 1.4.1-1.1
[2025-11-28 13:21:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 13:21:57] thA385
[2025-11-28 13:21:57] apptainer works
[2025-11-28 13:21:57] Set ATHENA_PROC_NUMBER=3
[2025-11-28 13:21:57] Set ATHENA_CORE_NUMBER=3
[2025-11-28 13:21:57] Starting ATLAS job with PandaID=6895350484
[2025-11-28 13:21:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 21:32:45]  *** The last 200 lines of the pilot log: ***
[2025-11-28 21:32:45] 2025-11-28 20:31:57,606 | INFO     | architecture information:
[2025-11-28 21:32:45] 2025-11-28 20:31:57,606 | INFO     | executing command: cat /etc/os-release
[2025-11-28 21:32:45] 2025-11-28 20:31:57,616 | INFO     | cat /etc/os-release:
[2025-11-28 21:32:45] NAME="CentOS Linux"
[2025-11-28 21:32:45] VERSION="7 (Core)"
[2025-11-28 21:32:45] ID="centos"
[2025-11-28 21:32:45] ID_LIKE="rhel fedora"
[2025-11-28 21:32:45] VERSION_ID="7"
[2025-11-28 21:32:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 21:32:45] ANSI_COLOR="0;31"
[2025-11-28 21:32:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 21:32:45] HOME_URL="https://www.centos.org/"
[2025-11-28 21:32:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 21:32:45] 
[2025-11-28 21:32:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 21:32:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 21:32:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 21:32:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 21:32:45] 
[2025-11-28 21:32:45] 2025-11-28 20:31:57,616 | INFO     | ***************************************
[2025-11-28 21:32:45] 2025-11-28 20:31:58,119 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-28 21:32:45] 2025-11-28 20:31:58,132 | INFO     | sufficient remaining disk space (367034105856 B)
[2025-11-28 21:32:45] 2025-11-28 20:31:58,132 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 21:32:45] 2025-11-28 20:31:58,132 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 21:32:45] 2025-11-28 20:31:58,132 | INFO     | update_server=False
[2025-11-28 21:32:45] 2025-11-28 20:31:58,133 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 21:32:45] 2025-11-28 20:31:58,133 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 21:32:45] 2025-11-28 20:31:58,133 | INFO     | aborting loop
[2025-11-28 21:32:45] 2025-11-28 20:31:58,133 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 21:32:45] 2025-11-28 20:31:58,133 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 21:32:45] 2025-11-28 20:31:58,406 | INFO     | all payload control threads have been joined
[2025-11-28 21:32:45] 2025-11-28 20:31:58,829 | INFO     | all job control threads have been joined
[2025-11-28 21:32:45] 2025-11-28 20:31:58,959 | INFO     | all data control threads have been joined
[2025-11-28 21:32:45] 2025-11-28 20:31:59,138 | INFO     | [job] job monitor thread has finished
[2025-11-28 21:32:45] 2025-11-28 20:31:59,138 | INFO     | [job] retrieve thread has finished
[2025-11-28 21:32:45] 2025-11-28 20:31:59,138 | INFO     | [job] queue monitor thread has finished
[2025-11-28 21:32:45] 2025-11-28 20:31:59,318 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 21:32:45] 2025-11-28 20:31:59,327 | INFO     | [payload] validate_post thread has finished
[2025-11-28 21:32:45] 2025-11-28 20:31:59,410 | INFO     | [payload] control thread has finished
[2025-11-28 21:32:45] 2025-11-28 20:31:59,766 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 21:32:45] 2025-11-28 20:31:59,835 | INFO     | [job] control thread has finished
[2025-11-28 21:32:45] 2025-11-28 20:31:59,890 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 21:32:45] 2025-11-28 20:31:59,893 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 21:32:45] 2025-11-28 20:31:59,930 | INFO     | [payload] failed_post thread has finished
[2025-11-28 21:32:45] 2025-11-28 20:31:59,964 | INFO     | [data] control thread has finished
[2025-11-28 21:32:45] 2025-11-28 20:32:00,496 | INFO     | [job] validate thread has finished
[2025-11-28 21:32:45] 2025-11-28 20:32:00,497 | INFO     | [data] copytool_in thread has finished
[2025-11-28 21:32:45] 2025-11-28 20:32:01,324 | INFO     | [data] copytool_out thread has finished
[2025-11-28 21:32:45] 2025-11-28 20:32:02,139 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 21:32:45] 2025-11-28 20:32:08,827 | INFO     | job.realtimelogging is not enabled
[2025-11-28 21:32:45] 2025-11-28 20:32:09,833 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 21:32:45] 2025-11-28 20:32:27,881 | INFO     | PID=1756196 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 21:32:45] 2025-11-28 20:32:27,881 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 21:32:45] 2025-11-28 20:32:27,881 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 21:32:45] 2025-11-28 20:32:27,882 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 21:32:45] 2025-11-28 20:32:38,170 | INFO     | [monitor] cgroup control has ended
[2025-11-28 21:32:45] 2025-11-28 20:32:40,009 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139756564604736)>', '<ExcThread(monitor, started 139755903751936)>']
[2025-11-28 21:32:45] 2025-11-28 20:32:40,951 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 21:32:45] 2025-11-28 20:32:40,952 | INFO     | [monitor] control thread has ended
[2025-11-28 21:32:45] 2025-11-28 20:32:45,035 | INFO     | all workflow threads have been joined
[2025-11-28 21:32:45] 2025-11-28 20:32:45,035 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 21:32:45] 2025-11-28 20:32:45,035 | INFO     | traces error code: 0
[2025-11-28 21:32:45] 2025-11-28 20:32:45,035 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 21:32:45] 2025-11-28 20:32:45,084 [wrapper] ==== pilot stdout END ====
[2025-11-28 21:32:45] 2025-11-28 20:32:45,087 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 21:32:45] 2025-11-28 20:32:45,089 [wrapper] pilotpid: 1756196
[2025-11-28 21:32:45] 2025-11-28 20:32:45,092 [wrapper] Pilot exit status: 0
[2025-11-28 21:32:45] 2025-11-28 20:32:45,099 [wrapper] pandaids: 6895350484
[2025-11-28 21:32:45] 2025-11-28 20:32:45,117 [wrapper] cleanup supervisor_pilot 1813995 1756197
[2025-11-28 21:32:45] 2025-11-28 20:32:45,119 [wrapper] Test setup, not cleaning
[2025-11-28 21:32:45] 2025-11-28 20:32:45,122 [wrapper] apfmon messages muted
[2025-11-28 21:32:45] 2025-11-28 20:32:45,124 [wrapper] ==== wrapper stdout END ====
[2025-11-28 21:32:45] 2025-11-28 20:32:45,127 [wrapper] ==== wrapper stderr END ====
[2025-11-28 21:32:45]  *** Error codes and diagnostics ***
[2025-11-28 21:32:45]     "exeErrorCode": 0,
[2025-11-28 21:32:45]     "exeErrorDiag": "",
[2025-11-28 21:32:45]     "pilotErrorCode": 0,
[2025-11-28 21:32:45]     "pilotErrorDiag": "",
[2025-11-28 21:32:45]  *** Listing of results directory ***
[2025-11-28 21:32:45] total 1318840
[2025-11-28 21:32:45] -rw-r--r-- 1 boinc boinc    576529 Nov 22 22:11 pilot3.tar.gz
[2025-11-28 21:32:45] -rwx------ 1 boinc boinc     36292 Nov 22 22:25 runpilot2-wrapper.sh
[2025-11-28 21:32:45] -rw-r--r-- 1 boinc boinc      5112 Nov 22 22:25 queuedata.json
[2025-11-28 21:32:45] -rw-r--r-- 1 boinc boinc       100 Nov 28 13:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 21:32:45] -rwxr-xr-x 1 boinc boinc      7986 Nov 28 13:21 run_atlas
[2025-11-28 21:32:45] -rw-r--r-- 1 boinc boinc       105 Nov 28 13:21 job.xml
[2025-11-28 21:32:45] -rw-r--r-- 2 boinc boinc 408345515 Nov 28 13:21 EVNT.47483658._000513.pool.root.1
[2025-11-28 21:32:45] -rw-r--r-- 2 boinc boinc    590100 Nov 28 13:21 input.tar.gz
[2025-11-28 21:32:45] -rw-r--r-- 2 boinc boinc     15847 Nov 28 13:21 start_atlas.sh
[2025-11-28 21:32:45] drwxrwx--x 2 boinc boinc      4096 Nov 28 13:21 shared
[2025-11-28 21:32:45] -rw-r--r-- 1 boinc boinc         0 Nov 28 13:21 boinc_setup_complete
[2025-11-28 21:32:45] -rw-r--r-- 1 boinc boinc      6447 Nov 28 13:21 init_data.xml
[2025-11-28 21:32:45] -rw-r--r-- 1 boinc boinc         0 Nov 28 13:21 boinc_lockfile
[2025-11-28 21:32:45] -rw-r--r-- 1 boinc boinc      2784 Nov 28 13:21 pandaJob.out
[2025-11-28 21:32:45] -rw------- 1 boinc boinc    991856 Nov 28 13:22 agis_schedconf.cvmfs.json
[2025-11-28 21:32:45] drwx------ 5 boinc boinc      4096 Nov 28 13:22 pilot3
[2025-11-28 21:32:45] -rw-r--r-- 1 boinc boinc       531 Nov 28 21:28 boinc_task_state.xml
[2025-11-28 21:32:45] -rw------- 1 boinc boinc 927608795 Nov 28 21:31 HITS.47556137._005090.pool.root.1
[2025-11-28 21:32:45] -rw------- 1 boinc boinc      1024 Nov 28 21:31 memory_monitor_summary.json
[2025-11-28 21:32:45] -rw------- 1 boinc boinc   1516240 Nov 28 21:31 agis_ddmendpoints.agis.ALL.json
[2025-11-28 21:32:45] -rw------- 1 boinc boinc   1178419 Nov 28 21:31 log.47556137._005090.job.log.tgz.1
[2025-11-28 21:32:45] -rw------- 1 boinc boinc      8556 Nov 28 21:31 heartbeat.json
[2025-11-28 21:32:45] -rw------- 1 boinc boinc        95 Nov 28 21:32 pilot_heartbeat.json
[2025-11-28 21:32:45] -rw-r--r-- 1 boinc boinc      8192 Nov 28 21:32 boinc_mmap_file
[2025-11-28 21:32:45] -rw-r--r-- 1 boinc boinc        28 Nov 28 21:32 wrapper_checkpoint.txt
[2025-11-28 21:32:45] -rw------- 1 boinc boinc      4824 Nov 28 21:32 pilotlog.txt
[2025-11-28 21:32:45] -rw------- 1 boinc boinc   4138443 Nov 28 21:32 log.47556137._005090.job.log.1
[2025-11-28 21:32:45] -rw------- 1 boinc boinc       353 Nov 28 21:32 output.list
[2025-11-28 21:32:45] -rw-r--r-- 1 boinc boinc       620 Nov 28 21:32 runtime_log
[2025-11-28 21:32:45] -rw------- 1 boinc boinc   5335040 Nov 28 21:32 result.tar.gz
[2025-11-28 21:32:45] -rw-r--r-- 1 boinc boinc      8898 Nov 28 21:32 runtime_log.err
[2025-11-28 21:32:45] -rw------- 1 boinc boinc       665 Nov 28 21:32 LXOODmjHAh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5PKKDmiISaPm.diag
[2025-11-28 21:32:45] -rw-r--r-- 1 boinc boinc      9062 Nov 28 21:32 stderr.txt
[2025-11-28 21:32:45] HITS file was successfully produced:
[2025-11-28 21:32:45] -rw------- 1 boinc boinc 927608795 Nov 28 21:31 shared/HITS.pool.root.1
[2025-11-28 21:32:45]  *** Contents of shared directory: ***
[2025-11-28 21:32:45] total 1310460
[2025-11-28 21:32:45] -rw-r--r-- 2 boinc boinc 408345515 Nov 28 13:21 ATLAS.root_0
[2025-11-28 21:32:45] -rw-r--r-- 2 boinc boinc    590100 Nov 28 13:21 input.tar.gz
[2025-11-28 21:32:45] -rw-r--r-- 2 boinc boinc     15847 Nov 28 13:21 start_atlas.sh
[2025-11-28 21:32:45] -rw------- 1 boinc boinc 927608795 Nov 28 21:31 HITS.pool.root.1
[2025-11-28 21:32:45] -rw------- 1 boinc boinc   5335040 Nov 28 21:32 result.tar.gz
21:32:47 (1752464): run_atlas exited; CPU time 86834.768892
21:32:47 (1752464): called boinc_finish(0)

</stderr_txt>
]]>

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