Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
09:10:02 (2523866): wrapper (7.7.26015): starting
09:10:02 (2523866): wrapper: running run_atlas (--nthreads 10)
[2025-11-25 09:10:02] Arguments: --nthreads 10
[2025-11-25 09:10:02] Threads: 10
[2025-11-25 09:10:02] Checking for CVMFS
[2025-11-25 09:10:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 09:10:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 09:10:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 09:10:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 09:10:03] 2.13.3.0 7351 10174 49856 153290 1 59 2980103 4096001 10698 130560 0 31465578 99.981 660117 757 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-25 09:10:03] CVMFS is ok
[2025-11-25 09:10:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 09:10:03] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-25 09:10:03] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-25 09:10:03] Further information can be found at the LHC@home message board.
[2025-11-25 09:10:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 09:10:03] Checking for apptainer binary...
[2025-11-25 09:10:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 09:10:03] Running /usr/bin/apptainer --version
[2025-11-25 09:10:03] apptainer version 1.4.2
[2025-11-25 09:10:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 09:10:04] 3950x-linux
[2025-11-25 09:10:04] apptainer works
[2025-11-25 09:10:04] Set ATHENA_PROC_NUMBER=10
[2025-11-25 09:10:04] Set ATHENA_CORE_NUMBER=10
[2025-11-25 09:10:04] Starting ATLAS job with PandaID=6895350164
[2025-11-25 09:10:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc224/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 05:46:59]  *** The last 200 lines of the pilot log: ***
[2025-11-26 05:46:59] 2025-11-26 13:46:18,717 | INFO     | time since job start (74138s) is within the limit (172800.0s)
[2025-11-26 05:46:59] 2025-11-26 13:46:19,607 | INFO     | monitor loop #4858: job 0:6895350164 is in state 'finished'
[2025-11-26 05:46:59] 2025-11-26 13:46:19,607 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 05:46:59] 2025-11-26 13:46:20,726 | INFO     | time since job start (74140s) is within the limit (172800.0s)
[2025-11-26 05:46:59] 2025-11-26 13:46:22,110 | INFO     | monitor loop #4859: job 0:6895350164 is in state 'finished'
[2025-11-26 05:46:59] 2025-11-26 13:46:22,110 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 05:46:59] 2025-11-26 13:46:22,734 | INFO     | time since job start (74142s) is within the limit (172800.0s)
[2025-11-26 05:46:59] 2025-11-26 13:46:24,613 | INFO     | monitor loop #4860: job 0:6895350164 is in state 'finished'
[2025-11-26 05:46:59] 2025-11-26 13:46:24,613 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 05:46:59] 2025-11-26 13:46:24,741 | INFO     | time since job start (74144s) is within the limit (172800.0s)
[2025-11-26 05:46:59] 2025-11-26 13:46:25,074 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 05:46:59] 2025-11-26 13:46:25,088 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3249.7855625
[2025-11-26 05:46:59] 2025-11-26 13:46:25,108 | INFO     | using path: /var/lib/multiboinc/boinc224/slots/2/PanDA_Pilot-6895350164/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 05:46:59] 2025-11-26 13:46:25,119 | INFO     | extracted standard info from prmon json
[2025-11-26 05:46:59] 2025-11-26 13:46:25,120 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 05:46:59] 2025-11-26 13:46:25,120 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 05:46:59] 2025-11-26 13:46:25,173 | INFO     | fitting pss+swap vs Time
[2025-11-26 05:46:59] 2025-11-26 13:46:25,180 | INFO     | sum of square deviations: 554796020264.7062
[2025-11-26 05:46:59] 2025-11-26 13:46:25,300 | INFO     | sum of deviations: 3039263126949.1426
[2025-11-26 05:46:59] 2025-11-26 13:46:25,300 | INFO     | mean x: 1764127719.7734761
[2025-11-26 05:46:59] 2025-11-26 13:46:25,300 | INFO     | mean y: 3123473.644151565
[2025-11-26 05:46:59] 2025-11-26 13:46:25,300 | INFO     | intersect: -9661056033.948977
[2025-11-26 05:46:59] 2025-11-26 13:46:25,310 | INFO     | chi2: 14.0275554980107
[2025-11-26 05:46:59] 2025-11-26 13:46:25,312 | INFO     | sum of square deviations: 547970434513.4075
[2025-11-26 05:46:59] 2025-11-26 13:46:25,422 | INFO     | sum of deviations: 3478909964023.7817
[2025-11-26 05:46:59] 2025-11-26 13:46:25,422 | INFO     | mean x: 1764127567.287014
[2025-11-26 05:46:59] 2025-11-26 13:46:25,422 | INFO     | mean y: 3133293.770057899
[2025-11-26 05:46:59] 2025-11-26 13:46:25,423 | INFO     | intersect: -11196815800.369736
[2025-11-26 05:46:59] 2025-11-26 13:46:25,423 | INFO     | chi2: 10.846652052270574
[2025-11-26 05:46:59] 2025-11-26 13:46:25,424 | INFO     | current chi2=10.846652052270574 (change=22.676106654443267 %)
[2025-11-26 05:46:59] 2025-11-26 13:46:25,424 | INFO     | right removable region: 1208
[2025-11-26 05:46:59] 2025-11-26 13:46:25,439 | INFO     | sum of square deviations: 547968010373.40735
[2025-11-26 05:46:59] 2025-11-26 13:46:25,555 | INFO     | sum of deviations: 2549172734260.43
[2025-11-26 05:46:59] 2025-11-26 13:46:25,555 | INFO     | mean x: 1764127872.287014
[2025-11-26 05:46:59] 2025-11-26 13:46:25,555 | INFO     | mean y: 3134417.995864351
[2025-11-26 05:46:59] 2025-11-26 13:46:25,555 | INFO     | intersect: -8203670699.548208
[2025-11-26 05:46:59] 2025-11-26 13:46:25,559 | INFO     | chi2: 10.497616229303635
[2025-11-26 05:46:59] 2025-11-26 13:46:25,560 | INFO     | current chi2=10.497616229303635 (change=25.16432224565185 %)
[2025-11-26 05:46:59] 2025-11-26 13:46:25,561 | INFO     | sum of square deviations: 541196234094.1587
[2025-11-26 05:46:59] 2025-11-26 13:46:25,669 | INFO     | sum of deviations: 2200492104694.95
[2025-11-26 05:46:59] 2025-11-26 13:46:25,670 | INFO     | mean x: 1764128024.8006644
[2025-11-26 05:46:59] 2025-11-26 13:46:25,670 | INFO     | mean y: 3142269.5664451825
[2025-11-26 05:46:59] 2025-11-26 13:46:25,670 | INFO     | intersect: -7169763870.001347
[2025-11-26 05:46:59] 2025-11-26 13:46:25,671 | INFO     | chi2: 8.851537901853272
[2025-11-26 05:46:59] 2025-11-26 13:46:25,671 | INFO     | current chi2=8.851537901853272 (change=15.680496328827564 %)
[2025-11-26 05:46:59] 2025-11-26 13:46:25,671 | INFO     | left removable region: 20
[2025-11-26 05:46:59] 2025-11-26 13:46:25,682 | INFO     | sum of square deviations: 519907344129.8885
[2025-11-26 05:46:59] 2025-11-26 13:46:25,775 | INFO     | sum of deviations: 2506792192468.076
[2025-11-26 05:46:59] 2025-11-26 13:46:25,775 | INFO     | mean x: 1764128146.813973
[2025-11-26 05:46:59] 2025-11-26 13:46:25,775 | INFO     | mean y: 3159124.489057239
[2025-11-26 05:46:59] 2025-11-26 13:46:25,775 | INFO     | intersect: -8502784703.535844
[2025-11-26 05:46:59] 2025-11-26 13:46:25,782 | INFO     | chi2: 4.894218928619368
[2025-11-26 05:46:59] 2025-11-26 13:46:25,783 | INFO     | current memory leak: 4.82 B/s (using 1188 data points, chi2=4.89)
[2025-11-26 05:46:59] 2025-11-26 13:46:25,784 | INFO     | could have reported an average CPU frequency of 3249 MHz (44 samples)
[2025-11-26 05:46:59] 2025-11-26 13:46:25,784 | INFO     | ..............................
[2025-11-26 05:46:59] 2025-11-26 13:46:25,784 | INFO     | . Timing measurements:
[2025-11-26 05:46:59] 2025-11-26 13:46:25,784 | INFO     | . get job = 0 s
[2025-11-26 05:46:59] 2025-11-26 13:46:25,784 | INFO     | . initial setup = 5 s
[2025-11-26 05:46:59] 2025-11-26 13:46:25,784 | INFO     | . payload setup = 21 s
[2025-11-26 05:46:59] 2025-11-26 13:46:25,784 | INFO     | . stage-in = 0 s
[2025-11-26 05:46:59] 2025-11-26 13:46:25,784 | INFO     | . payload execution = 74050 s
[2025-11-26 05:46:59] 2025-11-26 13:46:25,784 | INFO     | . stage-out = 8 s
[2025-11-26 05:46:59] 2025-11-26 13:46:25,784 | INFO     | . log creation = 2 s
[2025-11-26 05:46:59] 2025-11-26 13:46:25,784 | INFO     | ..............................
[2025-11-26 05:46:59] 2025-11-26 13:46:26,062 | INFO     | 
[2025-11-26 05:46:59] 2025-11-26 13:46:26,062 | INFO     | job summary report
[2025-11-26 05:46:59] 2025-11-26 13:46:26,063 | INFO     | --------------------------------------------------
[2025-11-26 05:46:59] 2025-11-26 13:46:26,063 | INFO     | PanDA job id: 6895350164
[2025-11-26 05:46:59] 2025-11-26 13:46:26,063 | INFO     | task id: 47556137
[2025-11-26 05:46:59] 2025-11-26 13:46:26,063 | INFO     | errors: (none)
[2025-11-26 05:46:59] 2025-11-26 13:46:26,063 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 05:46:59] 2025-11-26 13:46:26,063 | INFO     | pilot state: finished 
[2025-11-26 05:46:59] 2025-11-26 13:46:26,063 | INFO     | transexitcode: 0
[2025-11-26 05:46:59] 2025-11-26 13:46:26,063 | INFO     | exeerrorcode: 0
[2025-11-26 05:46:59] 2025-11-26 13:46:26,063 | INFO     | exeerrordiag: 
[2025-11-26 05:46:59] 2025-11-26 13:46:26,063 | INFO     | exitcode: 0
[2025-11-26 05:46:59] 2025-11-26 13:46:26,063 | INFO     | exitmsg: OK
[2025-11-26 05:46:59] 2025-11-26 13:46:26,063 | INFO     | cpuconsumptiontime: 217328 s
[2025-11-26 05:46:59] 2025-11-26 13:46:26,063 | INFO     | nevents: 1000
[2025-11-26 05:46:59] 2025-11-26 13:46:26,063 | INFO     | neventsw: 0
[2025-11-26 05:46:59] 2025-11-26 13:46:26,063 | INFO     | pid: 2537257
[2025-11-26 05:46:59] 2025-11-26 13:46:26,063 | INFO     | pgrp: 2537257
[2025-11-26 05:46:59] 2025-11-26 13:46:26,064 | INFO     | corecount: 10
[2025-11-26 05:46:59] 2025-11-26 13:46:26,064 | INFO     | event service: False
[2025-11-26 05:46:59] 2025-11-26 13:46:26,064 | INFO     | sizes: {0: 2284106, 1: 2284305, 12: 2284305, 18: 2284595, 23: 2284623, 74076: 2345973, 74085: 2354995, 74087: 2355051, 74105: 2355297}
[2025-11-26 05:46:59] 2025-11-26 13:46:26,064 | INFO     | --------------------------------------------------
[2025-11-26 05:46:59] 2025-11-26 13:46:26,064 | INFO     | 
[2025-11-26 05:46:59] 2025-11-26 13:46:26,064 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc224/slots/2
[2025-11-26 05:46:59] 2025-11-26 13:46:26,133 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 05:46:59] 2025-11-26 13:46:26,133 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 05:46:59] 2025-11-26 13:46:26,133 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 05:46:59] 2025-11-26 13:46:26,133 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 05:46:59] 2025-11-26 13:46:26,133 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 05:46:59] 2025-11-26 13:46:26,133 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 05:46:59] 2025-11-26 13:46:26,133 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 05:46:59] 2025-11-26 13:46:26,134 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 05:46:59] 2025-11-26 13:46:26,134 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 05:46:59] 2025-11-26 13:46:26,134 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 05:46:59] 2025-11-26 13:46:26,134 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 05:46:59] 2025-11-26 13:46:26,134 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 05:46:59] 2025-11-26 13:46:26,134 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 05:46:59] 2025-11-26 13:46:26,134 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 05:46:59] 2025-11-26 13:46:26,134 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 05:46:59] 2025-11-26 13:46:26,134 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 05:46:59] 2025-11-26 13:46:26,137 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 05:46:59] 2025-11-26 13:46:26,137 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 05:46:59] 2025-11-26 13:46:26,137 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 05:46:59] 2025-11-26 13:46:26,138 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 05:46:59] 2025-11-26 13:46:26,138 | INFO     | job 6895350164 has completed (purged errors)
[2025-11-26 05:46:59] 2025-11-26 13:46:26,138 | INFO     | overall cleanup function is called
[2025-11-26 05:46:59] 2025-11-26 13:46:27,191 | INFO     | --- collectZombieJob: --- 10, [2537257]
[2025-11-26 05:46:59] 2025-11-26 13:46:27,191 | INFO     | zombie collector waiting for pid 2537257
[2025-11-26 05:46:59] 2025-11-26 13:46:27,192 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 05:46:59] 2025-11-26 13:46:27,192 | INFO     | collected zombie processes
[2025-11-26 05:46:59] 2025-11-26 13:46:27,192 | INFO     | will attempt to kill all subprocesses of pid=2537257
[2025-11-26 05:46:59] 2025-11-26 13:46:28,126 | INFO     | process IDs to be killed: [2537257] (in reverse order)
[2025-11-26 05:46:59] 2025-11-26 13:46:28,455 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 05:46:59] 2025-11-26 13:46:28,456 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 05:46:59] 2025-11-26 13:46:28,477 | INFO     | did not find any defunct processes belonging to 2537257
[2025-11-26 05:46:59] 2025-11-26 13:46:28,492 | INFO     | did not find any defunct processes belonging to 2537257
[2025-11-26 05:46:59] 2025-11-26 13:46:28,496 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 05:46:59] 2025-11-26 13:46:28,496 | INFO     | ready for new job
[2025-11-26 05:46:59] 2025-11-26 13:46:28,496 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 05:46:59] 2025-11-26 13:46:28,508 | INFO     | ***************************************
[2025-11-26 05:46:59] 2025-11-26 13:46:28,509 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 05:46:59] 2025-11-26 13:46:28,509 | INFO     | ***************************************
[2025-11-26 05:46:59] 2025-11-26 13:46:28,509 | INFO     | 
[2025-11-26 05:46:59] 2025-11-26 13:46:28,514 | INFO     | architecture information:
[2025-11-26 05:46:59] 2025-11-26 13:46:28,514 | INFO     | executing command: cat /etc/os-release
[2025-11-26 05:46:59] 2025-11-26 13:46:28,568 | INFO     | cat /etc/os-release:
[2025-11-26 05:46:59] NAME="CentOS Linux"
[2025-11-26 05:46:59] VERSION="7 (Core)"
[2025-11-26 05:46:59] ID="centos"
[2025-11-26 05:46:59] ID_LIKE="rhel fedora"
[2025-11-26 05:46:59] VERSION_ID="7"
[2025-11-26 05:46:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 05:46:59] ANSI_COLOR="0;31"
[2025-11-26 05:46:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 05:46:59] HOME_URL="https://www.centos.org/"
[2025-11-26 05:46:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 05:46:59] 
[2025-11-26 05:46:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 05:46:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 05:46:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 05:46:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 05:46:59] 
[2025-11-26 05:46:59] 2025-11-26 13:46:28,568 | INFO     | ***************************************
[2025-11-26 05:46:59] 2025-11-26 13:46:29,070 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc224/slots/2
[2025-11-26 05:46:59] 2025-11-26 13:46:29,137 | INFO     | sufficient remaining disk space (64201162752 B)
[2025-11-26 05:46:59] 2025-11-26 13:46:29,138 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 05:46:59] 2025-11-26 13:46:29,138 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 05:46:59] 2025-11-26 13:46:29,138 | INFO     | update_server=False
[2025-11-26 05:46:59] 2025-11-26 13:46:29,138 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 05:46:59] 2025-11-26 13:46:29,138 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 05:46:59] 2025-11-26 13:46:29,138 | INFO     | aborting loop
[2025-11-26 05:46:59] 2025-11-26 13:46:29,139 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 05:46:59] 2025-11-26 13:46:29,314 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 05:46:59] 2025-11-26 13:46:30,042 | INFO     | all job control threads have been joined
[2025-11-26 05:46:59] 2025-11-26 13:46:30,101 | INFO     | all data control threads have been joined
[2025-11-26 05:46:59] 2025-11-26 13:46:30,143 | INFO     | [job] job monitor thread has finished
[2025-11-26 05:46:59] 2025-11-26 13:46:30,146 | INFO     | [job] retrieve thread has finished
[2025-11-26 05:46:59] 2025-11-26 13:46:30,364 | INFO     | all payload control threads have been joined
[2025-11-26 05:46:59] 2025-11-26 13:46:30,829 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 05:46:59] 2025-11-26 13:46:30,830 | INFO     | [payload] validate_post thread has finished
[2025-11-26 05:46:59] 2025-11-26 13:46:31,047 | INFO     | [job] control thread has finished
[2025-11-26 05:46:59] 2025-11-26 13:46:31,061 | INFO     | [job] validate thread has finished
[2025-11-26 05:46:59] 2025-11-26 13:46:31,062 | INFO     | [data] copytool_in thread has finished
[2025-11-26 05:46:59] 2025-11-26 13:46:31,062 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 05:46:59] 2025-11-26 13:46:31,062 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 05:46:59] 2025-11-26 13:46:31,106 | INFO     | [data] control thread has finished
[2025-11-26 05:46:59] 2025-11-26 13:46:31,286 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 05:46:59] 2025-11-26 13:46:31,319 | INFO     | [data] copytool_out thread has finished
[2025-11-26 05:46:59] 2025-11-26 13:46:31,369 | INFO     | [payload] control thread has finished
[2025-11-26 05:46:59] 2025-11-26 13:46:31,452 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 05:46:59] 2025-11-26 13:46:31,733 | INFO     | [payload] failed_post thread has finished
[2025-11-26 05:46:59] 2025-11-26 13:46:32,067 | INFO     | [job] queue monitor thread has finished
[2025-11-26 05:46:59] 2025-11-26 13:46:33,146 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 05:46:59] 2025-11-26 13:46:43,801 | INFO     | [monitor] cgroup control has ended
[2025-11-26 05:46:59] 2025-11-26 13:46:44,843 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136621141079872)>', '<ExcThread(monitor, started 136620342761216)>']
[2025-11-26 05:46:59] 2025-11-26 13:46:49,868 | INFO     | all workflow threads have been joined
[2025-11-26 05:46:59] 2025-11-26 13:46:49,868 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 05:46:59] 2025-11-26 13:46:49,869 | INFO     | traces error code: 0
[2025-11-26 05:46:59] 2025-11-26 13:46:49,869 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 05:46:59] 2025-11-26 13:46:58,720 | INFO     | PID=2528395 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 05:46:59] 2025-11-26 13:46:58,720 | INFO     | .. there are 11 such processes running
[2025-11-26 05:46:59] 2025-11-26 13:46:58,721 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 05:46:59] 2025-11-26 13:46:58,727 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 05:46:59] 2025-11-26 13:46:58,727 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 05:46:59] 2025-11-26 13:46:58,728 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 05:46:59] 2025-11-26 13:46:58,728 | INFO     | [monitor] control thread has ended
[2025-11-26 05:46:59] 2025-11-26 13:46:59,282 [wrapper] ==== pilot stdout END ====
[2025-11-26 05:46:59] 2025-11-26 13:46:59,304 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 05:46:59] 2025-11-26 13:46:59,316 [wrapper] pilotpid: 2528395
[2025-11-26 05:46:59] 2025-11-26 13:46:59,328 [wrapper] Pilot exit status: 0
[2025-11-26 05:46:59] 2025-11-26 13:46:59,361 [wrapper] pandaids: 6895350164
[2025-11-26 05:46:59] 2025-11-26 13:46:59,534 [wrapper] cleanup supervisor_pilot 3811801 2528396
[2025-11-26 05:46:59] 2025-11-26 13:46:59,551 [wrapper] Test setup, not cleaning
[2025-11-26 05:46:59] 2025-11-26 13:46:59,557 [wrapper] apfmon messages muted
[2025-11-26 05:46:59] 2025-11-26 13:46:59,576 [wrapper] ==== wrapper stdout END ====
[2025-11-26 05:46:59] 2025-11-26 13:46:59,595 [wrapper] ==== wrapper stderr END ====
[2025-11-26 05:46:59]  *** Error codes and diagnostics ***
[2025-11-26 05:47:00]     "exeErrorCode": 0,
[2025-11-26 05:47:00]     "exeErrorDiag": "",
[2025-11-26 05:47:00]     "pilotErrorCode": 0,
[2025-11-26 05:47:00]     "pilotErrorDiag": "",
[2025-11-26 05:47:00]  *** Listing of results directory ***
[2025-11-26 05:47:00] total 1331584
[2025-11-26 05:47:00] -rw-r--r-- 1 root root      5112 Nov 22 12:39 queuedata.json
[2025-11-26 05:47:00] -rw-r--r-- 1 root root    576529 Nov 22 12:41 pilot3.tar.gz
[2025-11-26 05:47:00] -rwx------ 1 4871 1028     36292 Nov 22 12:42 runpilot2-wrapper.sh
[2025-11-26 05:47:00] -rw-r--r-- 1 root root       100 Nov 25 09:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 05:47:00] -rwxr-xr-x 1 root root      7986 Nov 25 09:10 run_atlas
[2025-11-26 05:47:00] -rw-r--r-- 1 root root       105 Nov 25 09:10 job.xml
[2025-11-26 05:47:00] -rw-r--r-- 2 root root 411260376 Nov 25 09:10 EVNT.47483658._000498.pool.root.1
[2025-11-26 05:47:00] drwxrwx--x 2 root root      4096 Nov 25 09:10 shared
[2025-11-26 05:47:00] -rw-r--r-- 2 root root    590105 Nov 25 09:10 input.tar.gz
[2025-11-26 05:47:00] -rw-r--r-- 2 root root     15847 Nov 25 09:10 start_atlas.sh
[2025-11-26 05:47:00] -rw-r--r-- 1 root root         0 Nov 25 09:10 boinc_setup_complete
[2025-11-26 05:47:00] -rw-r--r-- 1 root root      9236 Nov 25 09:10 init_data.xml
[2025-11-26 05:47:00] -rw-r--r-- 1 root root         0 Nov 25 09:10 boinc_lockfile
[2025-11-26 05:47:00] -rw-r--r-- 1 root root      2784 Nov 25 09:10 pandaJob.out
[2025-11-26 05:47:00] -rw------- 1 root root    991543 Nov 25 09:10 agis_schedconf.cvmfs.json
[2025-11-26 05:47:00] drwxr-xr-x 5  320  320      4096 Nov 25 09:10 pilot3
[2025-11-26 05:47:00] -rw-r--r-- 1 root root       533 Nov 26 05:21 boinc_task_state.xml
[2025-11-26 05:47:00] -rw------- 1 root root 922857487 Nov 26 05:44 HITS.47556137._004932.pool.root.1
[2025-11-26 05:47:00] -rw------- 1 root root      1049 Nov 26 05:45 memory_monitor_summary.json
[2025-11-26 05:47:00] -rw------- 1 root root   1516240 Nov 26 05:46 agis_ddmendpoints.agis.ALL.json
[2025-11-26 05:47:00] -rw------- 1 root root   2569980 Nov 26 05:46 log.47556137._004932.job.log.tgz.1
[2025-11-26 05:47:00] -rw------- 1 root root      8604 Nov 26 05:46 heartbeat.json
[2025-11-26 05:47:00] -rw-r--r-- 1 root root      8192 Nov 26 05:46 boinc_mmap_file
[2025-11-26 05:47:00] -rw-r--r-- 1 root root        29 Nov 26 05:46 wrapper_checkpoint.txt
[2025-11-26 05:47:00] -rw------- 1 root root        95 Nov 26 05:46 pilot_heartbeat.json
[2025-11-26 05:47:00] -rw------- 1 root root       823 Nov 26 05:46 pilotlog.txt
[2025-11-26 05:47:00] -rw------- 1 root root  10179621 Nov 26 05:46 log.47556137._004932.job.log.1
[2025-11-26 05:47:00] -rw------- 1 root root       353 Nov 26 05:46 output.list
[2025-11-26 05:47:00] -rw-r--r-- 1 root root       620 Nov 26 05:46 runtime_log
[2025-11-26 05:47:00] -rw------- 1 root root  12769280 Nov 26 05:46 result.tar.gz
[2025-11-26 05:47:00] -rw-r--r-- 1 root root      9021 Nov 26 05:46 runtime_log.err
[2025-11-26 05:47:00] -rw------- 1 root root       662 Nov 26 05:46 PSJKDmtb9g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmROKKDmmzvAIn.diag
[2025-11-26 05:47:00] -rw-r--r-- 1 root root     21670 Nov 26 05:47 stderr.txt
[2025-11-26 05:47:00] HITS file was successfully produced:
[2025-11-26 05:47:00] -rw------- 1 root root 922857487 Nov 26 05:44 shared/HITS.pool.root.1
[2025-11-26 05:47:00]  *** Contents of shared directory: ***
[2025-11-26 05:47:00] total 1315932
[2025-11-26 05:47:00] -rw-r--r-- 2 root root 411260376 Nov 25 09:10 ATLAS.root_0
[2025-11-26 05:47:00] -rw-r--r-- 2 root root    590105 Nov 25 09:10 input.tar.gz
[2025-11-26 05:47:00] -rw-r--r-- 2 root root     15847 Nov 25 09:10 start_atlas.sh
[2025-11-26 05:47:00] -rw------- 1 root root 922857487 Nov 26 05:44 HITS.pool.root.1
[2025-11-26 05:47:00] -rw------- 1 root root  12769280 Nov 26 05:46 result.tar.gz
05:47:01 (2523866): run_atlas exited; CPU time 217547.153835
05:47:01 (2523866): called boinc_finish(0)

</stderr_txt>
]]>

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